mRNA_S-ischiensis_contig8.19388.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19388.1 vs. uniprot
Match: A0A835YW34_9STRA (Protein kish n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW34_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.380e-31 Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 1
Query: 58 MSAIFDFSSLITVLLLFICTCTYLRGYRKTIFDT--EEGSHSGVRGICWKAARVGERLSPYVGGACVAMAVHVLFIKQ 285
MSAIFDFSSLITVLLL ICTCTYLRG+R IFD E H+G +G+CWK +R+GER+SPYV +C+ MAVH+LFIKQ
Sbjct: 1 MSAIFDFSSLITVLLLLICTCTYLRGFRSGIFDNSAEPHRHTGFKGLCWKFSRIGERISPYVSVSCLLMAVHILFIKQ 78
BLAST of mRNA_S-ischiensis_contig8.19388.1 vs. uniprot
Match: D7G6V7_ECTSI (Protein kish n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6V7_ECTSI) HSP 1 Score: 109 bits (273), Expect = 2.960e-29 Identity = 50/72 (69.44%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 58 MSAIFDFSSLITVLLLFICTCTYLRGYRKTIFDTEEGSHSGVRGICWKAARVGERLSPYVGGACVAMAVHVL 273
MSA+F L+TV+LL IC CTY+RGYRK IFD E+GSHSG+RG+CWKAARVGERLSPYV A + MA VL
Sbjct: 1 MSALFSMPDLLTVILLLICVCTYVRGYRKGIFDVEDGSHSGLRGLCWKAARVGERLSPYVSAALLVMAGRVL 72
BLAST of mRNA_S-ischiensis_contig8.19388.1 vs. uniprot
Match: W7TJ60_9STRA (Transmembrane protein 167 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ60_9STRA) HSP 1 Score: 108 bits (270), Expect = 8.980e-28 Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 58 MSAIFDFSSLITVLLLFICTCTYLRGYRKTIFDTEEGS------HSGVRGICWKAARVGERLSPYVGGACVAMAVHVLFIKQ 285
MSAIFDFSSLITV+LLFI TCTYLRG+R TIFD + H G+ G CWKA+R+GER S +VG ACV MAVHVLF K+
Sbjct: 76 MSAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRHEGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFFKK 157
BLAST of mRNA_S-ischiensis_contig8.19388.1 vs. uniprot
Match: B7FZL0_PHATC (Protein kish n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZL0_PHATC) HSP 1 Score: 100 bits (248), Expect = 1.730e-25 Identity = 50/75 (66.67%), Postives = 54/75 (72.00%), Query Frame = 1
Query: 58 MSAIFDFSSLITVLLLFICTCTYLRGYRKTIFDTEEGSHSGVRGICWKAARVGERLSPYVGGACVAMAVHVLFIK 282
MSAIFDFSSL+TVLLL ICTCTYLR R IFD + G G WK +RVGERLSPYVG C MAVH+LF K
Sbjct: 1 MSAIFDFSSLVTVLLLLICTCTYLRELRPGIFDA---AREGFWGFLWKLSRVGERLSPYVGAGCALMAVHILFFK 72
BLAST of mRNA_S-ischiensis_contig8.19388.1 vs. uniprot
Match: F0WK68_9STRA (Protein kish n=2 Tax=Albugo TaxID=65356 RepID=F0WK68_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 6.580e-24 Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 58 MSAIFDFSSLITVLLLFICTCTYLRGYRKTIFDTEE--GSHSGVRGICWKAARVGERLSPYVGGACVAMAVHVLF 276
MSA+F LITV+LLFICTC+Y+R T+FD + G H G+ G+CWKA+R+GER SPYV GA + MA+H LF
Sbjct: 1 MSALFSLPGLITVILLFICTCSYIRAKFPTVFDRNQQPGKHEGLSGLCWKASRIGERKSPYVAGALILMALHTLF 75
BLAST of mRNA_S-ischiensis_contig8.19388.1 vs. uniprot
Match: A0A8D0GFE5_SPHPU (Protein kish n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0GFE5_SPHPU) HSP 1 Score: 94.4 bits (233), Expect = 5.890e-23 Identity = 45/82 (54.88%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 37 GGGYRLSMSAIFDFSSLITVLLLFICTCTYLRGYRKTIFDTEEGSHSGVRGICWKAARVGERLSPYVGGACVAMAVHVLFIK 282
GG R++MSAIF+F SL+TV+LL ICTCTY+R T+ D + SG+ GI WK AR+GER SPYV C+AMA +LF++
Sbjct: 15 GGWRRVTMSAIFNFQSLLTVILLLICTCTYIRSLAPTLLDKNK---SGLLGIFWKCARIGERKSPYVAVCCIAMAFSILFVQ 93
BLAST of mRNA_S-ischiensis_contig8.19388.1 vs. uniprot
Match: F0Y3L9_AURAN (Protein kish n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3L9_AURAN) HSP 1 Score: 94.0 bits (232), Expect = 6.880e-23 Identity = 47/84 (55.95%), Postives = 56/84 (66.67%), Query Frame = 1
Query: 58 MSAIFDFSSLITVLLLFICTCTYLRGYRKTIFDTEEGS------------HSGVRGICWKAARVGERLSPYVGGACVAMAVHVL 273
MSAIFDFSSL+TVLLL ICTCTY+R R ++FD + SG+RG CWKA+R+GERLSPYV AMA H+L
Sbjct: 1 MSAIFDFSSLVTVLLLIICTCTYVRAMRPSVFDGGLSADDLASPHLSYKRRSGIRGACWKASRIGERLSPYVSVVVAAMAFHIL 84
BLAST of mRNA_S-ischiensis_contig8.19388.1 vs. uniprot
Match: A0A1Z5JCC7_FISSO (Protein kish n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCC7_FISSO) HSP 1 Score: 93.6 bits (231), Expect = 8.500e-23 Identity = 48/81 (59.26%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 58 MSAIFDFSSLITVLLLFICTCTYLRGYRKTIFDT--EEGS----HSGVRGICWKAARVGERLSPYVGGACVAMAVHVLFIK 282
MSAIF+FSSL+TVLLL ICTC YLR R IFD +EG G+ G WK +R+GERLSPY+G C MA+HVLFI+
Sbjct: 1 MSAIFNFSSLLTVLLLLICTCAYLRELRPGIFDPPRKEGETKLKREGLTGFLWKMSRIGERLSPYIGVGCFIMAIHVLFIQ 81
BLAST of mRNA_S-ischiensis_contig8.19388.1 vs. uniprot
Match: A0A482RTZ6_9ARCH (Protein kish n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTZ6_9ARCH) HSP 1 Score: 94.0 bits (232), Expect = 1.020e-22 Identity = 48/99 (48.48%), Postives = 58/99 (58.59%), Query Frame = 1
Query: 58 MSAIFDFSSLITVLLLFICTCTYLRGYRKTIFDT------------------------EEGSHSGVRGICWKAARVGERLSPYVGGACVAMAVHVLFIK 282
MSA+FDF SLI VLLLFIC T+ R TIFD+ + H G+RG+CWKA+R+GERLSPYV G CV MA H+LFI+
Sbjct: 1 MSALFDFPSLIVVLLLFICATTFTRSLYPTIFDSVPNNGQSGQNDPNAMSSMSRITSSNKQEHVGLRGLCWKASRIGERLSPYVAGVCVVMAFHILFIR 99
BLAST of mRNA_S-ischiensis_contig8.19388.1 vs. uniprot
Match: K3X7N3_GLOUD (Protein kish n=4 Tax=Pythiaceae TaxID=4782 RepID=K3X7N3_GLOUD) HSP 1 Score: 93.2 bits (230), Expect = 1.080e-22 Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 1
Query: 58 MSAIFDFSSLITVLLLFICTCTYLRGYRKTIFDT--EEGSHSGVRGICWKAARVGERLSPYVGGACVAMAVHVL 273
MSA+F LITV+LLFICTCTY+R TIFD + G H G+ G+CWKA+R+GER SPYV G V MA H L
Sbjct: 1 MSALFSLQGLITVILLFICTCTYIRMKFPTIFDRGQQPGKHEGLSGLCWKASRIGERKSPYVAGVLVVMAFHTL 74 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19388.1 >prot_S-ischiensis_contig8.19388.1 ID=prot_S-ischiensis_contig8.19388.1|Name=mRNA_S-ischiensis_contig8.19388.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=77bp MSAIFDFSSLITVLLLFICTCTYLRGYRKTIFDTEEGSHSGVRGICWKAAback to top mRNA from alignment at S-ischiensis_contig8:1118687..1119179- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19388.1 ID=mRNA_S-ischiensis_contig8.19388.1|Name=mRNA_S-ischiensis_contig8.19388.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=493bp|location=Sequence derived from alignment at S-ischiensis_contig8:1118687..1119179- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:1118687..1119179- >mRNA_S-ischiensis_contig8.19388.1 ID=mRNA_S-ischiensis_contig8.19388.1|Name=mRNA_S-ischiensis_contig8.19388.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=462bp|location=Sequence derived from alignment at S-ischiensis_contig8:1118687..1119179- (Schizocladia ischiensis KU_0333)back to top |