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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1283 |
| Cds size | 1035 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817257.137312-CDS-S-ischiensis_contig8:895160..896162 | 1622817257.137312-CDS-S-ischiensis_contig8:895160..896162 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 895161..896162 - |
| 1695740974.7417896-CDS-S-ischiensis_contig8:895160..896162 | 1695740974.7417896-CDS-S-ischiensis_contig8:895160..896162 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 895161..896162 - |
| 1622817257.1476758-CDS-S-ischiensis_contig8:896258..896291 | 1622817257.1476758-CDS-S-ischiensis_contig8:896258..896291 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 896259..896291 - |
| 1695740974.7534683-CDS-S-ischiensis_contig8:896258..896291 | 1695740974.7534683-CDS-S-ischiensis_contig8:896258..896291 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 896259..896291 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817257.1600733-UTR-S-ischiensis_contig8:896291..896537 | 1622817257.1600733-UTR-S-ischiensis_contig8:896291..896537 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 896292..896537 - |
| 1695740974.7626455-UTR-S-ischiensis_contig8:896291..896537 | 1695740974.7626455-UTR-S-ischiensis_contig8:896291..896537 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 896292..896537 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19355.1 >prot_S-ischiensis_contig8.19355.1 ID=prot_S-ischiensis_contig8.19355.1|Name=mRNA_S-ischiensis_contig8.19355.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=345bp
MSGRPVKGDHKVKANQGDAALRRKSPHTVASAGDEKLQRRGGTVPRRGSP
SLSRTPSPSQSMPYSPAPGSGHGHRAHGHVHSHGPTRRSPISAKPSAAMS
NTRSAFQEPGKRWGSPEIMSRKPHSSVHRAMGRQSPAGHKVPPPPPPVRP
STPKASKDAPPAPPPPPPPKAGGEEPRETTELDDYFLGRSILEQAPERDD
MEDDDLHEELKQIQGTLQSTVHHQVLAARSSSAGSSFRADSGVQNLGGSV
DMLEMELIPDDGRGGGGGGGGGAGAAVAAAAAAAAATTSLGAGSPPQFSG
TPASAEEGVAAVTAGSRIPMPRHDGSSPHWGTCVAGGAARQREDR back to topmRNA from alignment at S-ischiensis_contig8:895161..896537- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19355.1 ID=mRNA_S-ischiensis_contig8.19355.1|Name=mRNA_S-ischiensis_contig8.19355.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1377bp|location=Sequence derived from alignment at S-ischiensis_contig8:895161..896537- (Schizocladia ischiensis KU_0333)
GCGCTCGCGGGTCTCGCGTCCGCAGGTACGCAGGGAGGAGATCGTCAAAA
CGCTTGCAGGCCGACGAGGGGAATGTCGGGTGGGTGAATGGGCCACTGAC
GGGGATGCGGCGGTCAACGTCGCTGGCGATCTTGCCATCGGTAGCCAGAC
GTCCAAGGAGACCCCTGCGCGGCTTTTCCGTGTTTTCTACGTGTCCAAGG
CCGCCAGCGCGGTGACAGATACACACCATTTCCTGTGGGCTAGAACATGT
CTGGTCGACCCGTCAAGGGCGACCATAAGGTGAGCGCGGCTGCAATATTG
GACTCTCCCGCACCTGTGTGCCCCCCTGCCTGCTCTGCCCACGTGACGAT
CTTCTGCTCGTCTGCCCGGCCACAGGTCAAAGCCAACCAGGGCGATGCAG
CTCTCCGTCGCAAGAGCCCCCACACGGTGGCTTCCGCTGGCGATGAAAAG
CTGCAGCGAAGAGGCGGCACCGTCCCGCGACGTGGCAGCCCGAGTCTCTC
CCGCACGCCGAGCCCGAGCCAGTCGATGCCCTACTCGCCGGCGCCTGGCT
CGGGCCATGGCCATCGCGCACACGGCCATGTGCACTCCCACGGGCCGACG
CGCCGCAGCCCAATATCCGCCAAACCCAGCGCCGCCATGAGCAACACCAG
GAGCGCTTTCCAAGAGCCAGGCAAGCGTTGGGGGAGCCCAGAAATCATGT
CAAGGAAGCCTCACAGCAGCGTGCACAGGGCCATGGGAAGGCAGAGTCCT
GCGGGCCACAAGGTGCCGCCACCCCCGCCGCCCGTGAGGCCCTCCACCCC
CAAAGCGAGCAAAGACGCCCCGCCAGCCCCTCCTCCCCCGCCCCCCCCAA
AAGCGGGGGGGGAGGAGCCGCGGGAGACGACTGAGCTCGACGACTACTTC
CTGGGCCGGAGCATCCTCGAGCAGGCCCCGGAGCGCGACGACATGGAGGA
CGACGACCTGCACGAGGAGCTCAAGCAGATCCAGGGCACCCTTCAGTCCA
CCGTGCACCACCAGGTGCTGGCCGCCCGCAGCTCCTCCGCCGGCAGCAGC
TTCCGGGCAGACTCCGGGGTGCAGAACCTGGGCGGATCGGTGGACATGCT
TGAGATGGAGCTCATCCCGGATGACGGGCGTGGCGGCGGCGGAGGCGGCG
GCGGCGGCGCTGGTGCTGCGGTGGCGGCGGCCGCCGCTGCTGCAGCAGCG
ACGACGTCCTTGGGGGCGGGCTCACCCCCGCAGTTCTCCGGCACCCCTGC
TAGCGCAGAAGAAGGCGTCGCCGCCGTCACCGCTGGTTCCAGGATACCCA
TGCCCCGACACGATGGCAGCAGCCCCCACTGGGGGACCTGTGTGGCCGGG
GGGGCGGCGCGCCAGAGGGAGGACCGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:895161..896537- >mRNA_S-ischiensis_contig8.19355.1 ID=mRNA_S-ischiensis_contig8.19355.1|Name=mRNA_S-ischiensis_contig8.19355.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2070bp|location=Sequence derived from alignment at S-ischiensis_contig8:895161..896537- (Schizocladia ischiensis KU_0333)
ATGTCTGGTCGACCCGTCAAGGGCGACCATAAGATGTCTGGTCGACCCGT
CAAGGGCGACCATAAGGTCAAAGCCAACCAGGGCGATGCAGCTCTCCGTC
GCAAGAGCCCCCACACGGTGGCTTCCGCTGGCGATGAAAAGCTGCAGCGA
AGAGGCGGCACCGTCCCGCGACGTGGCAGCCCGAGTCTCTCCCGCACGCC
GAGCCCGAGCCAGTCGATGCCCTACTCGCCGGCGCCTGGCTCGGGCCATG
GCCATCGCGCACACGGCCATGTGCACTCCCACGGGCCGACGCGCCGCAGC
CCAATATCCGCCAAACCCAGCGCCGCCATGAGCAACACCAGGAGCGCTTT
CCAAGAGCCAGGCAAGCGTTGGGGGAGCCCAGAAATCATGTCAAGGAAGC
CTCACAGCAGCGTGCACAGGGCCATGGGAAGGCAGAGTCCTGCGGGCCAC
AAGGTGCCGCCACCCCCGCCGCCCGTGAGGCCCTCCACCCCCAAAGCGAG
CAAAGACGCCCCGCCAGCCCCTCCTCCCCCGCCCCCCCCAAAAGCGGGGG
GGGAGGAGCCGCGGGAGACGACTGAGCTCGACGACTACTTCCTGGGCCGG
AGCATCCTCGAGCAGGCCCCGGAGCGCGACGACATGGAGGACGACGACCT
GCACGAGGAGCTCAAGCAGATCCAGGGCACCCTTCAGTCCACCGTGCACC
ACCAGGTGCTGGCCGCCCGCAGCTCCTCCGCCGGCAGCAGCTTCCGGGCA
GACTCCGGGGTGCAGAACCTGGGCGGATCGGTGGACATGCTTGAGATGGA
GCTCATCCCGGATGACGGGCGTGGCGGCGGCGGAGGCGGCGGCGGCGGCG
CTGGTGCTGCGGTGGCGGCGGCCGCCGCTGCTGCAGCAGCGACGACGTCC
TTGGGGGCGGGCTCACCCCCGCAGTTCTCCGGCACCCCTGCTAGCGCAGA
AGAAGGCGTCGCCGCCGTCACCGCTGGTTCCAGGATACCCATGCCCCGAC
ACGATGGCAGCAGCCCCCACTGGGGGACCTGTGTGGCCGGGGGGGCGGCG
CGCCAGAGGGAGGACCGGGTCAAAGCCAACCAGGGCGATGCAGCTCTCCG
TCGCAAGAGCCCCCACACGGTGGCTTCCGCTGGCGATGAAAAGCTGCAGC
GAAGAGGCGGCACCGTCCCGCGACGTGGCAGCCCGAGTCTCTCCCGCACG
CCGAGCCCGAGCCAGTCGATGCCCTACTCGCCGGCGCCTGGCTCGGGCCA
TGGCCATCGCGCACACGGCCATGTGCACTCCCACGGGCCGACGCGCCGCA
GCCCAATATCCGCCAAACCCAGCGCCGCCATGAGCAACACCAGGAGCGCT
TTCCAAGAGCCAGGCAAGCGTTGGGGGAGCCCAGAAATCATGTCAAGGAA
GCCTCACAGCAGCGTGCACAGGGCCATGGGAAGGCAGAGTCCTGCGGGCC
ACAAGGTGCCGCCACCCCCGCCGCCCGTGAGGCCCTCCACCCCCAAAGCG
AGCAAAGACGCCCCGCCAGCCCCTCCTCCCCCGCCCCCCCCAAAAGCGGG
GGGGGAGGAGCCGCGGGAGACGACTGAGCTCGACGACTACTTCCTGGGCC
GGAGCATCCTCGAGCAGGCCCCGGAGCGCGACGACATGGAGGACGACGAC
CTGCACGAGGAGCTCAAGCAGATCCAGGGCACCCTTCAGTCCACCGTGCA
CCACCAGGTGCTGGCCGCCCGCAGCTCCTCCGCCGGCAGCAGCTTCCGGG
CAGACTCCGGGGTGCAGAACCTGGGCGGATCGGTGGACATGCTTGAGATG
GAGCTCATCCCGGATGACGGGCGTGGCGGCGGCGGAGGCGGCGGCGGCGG
CGCTGGTGCTGCGGTGGCGGCGGCCGCCGCTGCTGCAGCAGCGACGACGT
CCTTGGGGGCGGGCTCACCCCCGCAGTTCTCCGGCACCCCTGCTAGCGCA
GAAGAAGGCGTCGCCGCCGTCACCGCTGGTTCCAGGATACCCATGCCCCG
ACACGATGGCAGCAGCCCCCACTGGGGGACCTGTGTGGCCGGGGGGGCGG
CGCGCCAGAGGGAGGACCGG back to top
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