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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1011 |
| Cds size | 1011 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817256.934953-CDS-S-ischiensis_contig8:818552..819490 | 1622817256.934953-CDS-S-ischiensis_contig8:818552..819490 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 818553..819490 - |
| 1695740974.5795655-CDS-S-ischiensis_contig8:818552..819490 | 1695740974.5795655-CDS-S-ischiensis_contig8:818552..819490 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 818553..819490 - |
| 1622817256.9476802-CDS-S-ischiensis_contig8:819527..819600 | 1622817256.9476802-CDS-S-ischiensis_contig8:819527..819600 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 819528..819600 - |
| 1695740974.5957596-CDS-S-ischiensis_contig8:819527..819600 | 1695740974.5957596-CDS-S-ischiensis_contig8:819527..819600 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 819528..819600 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19345.1 >prot_S-ischiensis_contig8.19345.1 ID=prot_S-ischiensis_contig8.19345.1|Name=mRNA_S-ischiensis_contig8.19345.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=337bp
MTEVGPTQQRRVGLPQHVARGQRKAGAASWWPWPSASAEAMATLCRGPPV
PDAATATAPPAAGGTGVVAPRGDPSAVADMSESAEGNRGILRPACGSRRW
ARSGITTGPAGPAASLDSDHSGGGGTSEWPPLLGTVLPRPGGSTCATGPG
GQVAAAAAAAAAAAAPPSAGAVSAAAVAAVGRVVWQTALGSDDRTATAAA
AAVVVAAVAAAAASVAAAPVAACDVVGWAAWAVAAAAAASAWAAASLMEA
SSACAAASALATAPGSPWATACCRSASCSACCCCCTAGGSIWNRSGGRAR
ASATMRGPAGGTSSTEPMPSASTNSASSASISCVCAR back to topmRNA from alignment at S-ischiensis_contig8:818553..819600- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19345.1 ID=mRNA_S-ischiensis_contig8.19345.1|Name=mRNA_S-ischiensis_contig8.19345.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1048bp|location=Sequence derived from alignment at S-ischiensis_contig8:818553..819600- (Schizocladia ischiensis KU_0333)
ATGACGGAGGTAGGCCCCACCCAACAGCGACGCGTGGGGCTGCCCCAACA
CGTAGCCCGGGGGCAACGCAAGGGCCGGCGCCGGCGCCGCCGCCGCCGGC
CCTCGGGAAGCCGGTGCCGCCAGCTGGTGGCCCTGGCCATCGGCGTCGGC
GGAGGCCATGGCGACGCTATGCAGAGGCCCCCCGGTCCCGGACGCCGCCA
CTGCCACCGCCCCCCCCGCGGCGGGGGGGACGGGGGTGGTCGCGCCACGC
GGGGACCCGAGCGCGGTTGCAGACATGAGCGAGTCCGCCGAGGGCAACCG
CGGCATATTACGCCCCGCGTGCGGGTCACGGAGGTGGGCCCGCTCGGGCA
TCACGACCGGCCCCGCGGGCCCGGCGGCCAGCCTCGACAGCGACCACAGC
GGTGGCGGCGGCACCAGCGAGTGGCCGCCGCTGCTGGGGACGGTGCTACC
ACGGCCCGGGGGCAGTACCTGCGCTACCGGTCCAGGGGGGCAAGTAGCCG
CAGCGGCAGCTGCGGCGGCTGCGGCGGCGGCGCCCCCCTCAGCCGGGGCA
GTATCCGCCGCGGCCGTTGCTGCGGTCGGCAGGGTTGTGTGGCAAACAGC
GCTTGGCTCGGATGACCGCACAGCCACCGCTGCCGCCGCCGCCGTCGTCG
TTGCCGCCGTCGCCGCCGCCGCTGCCTCCGTTGCCGCCGCCCCCGTCGCC
GCCTGCGACGTGGTAGGCTGGGCGGCGTGGGCGGTGGCGGCGGCGGCGGC
GGCATCGGCCTGGGCTGCCGCCTCCTTGATGGAGGCTTCGAGCGCTTGCG
CGGCGGCCTCGGCCTTGGCCACGGCGCCCGGTTCCCCCTGGGCGACCGCC
TGCTGCAGAAGCGCCAGCTGCAGTGCGTGCTGCTGCTGCTGCACCGCCGG
CGGGAGCATCTGGAACAGGTCCGGCGGCAGGGCGAGGGCGTCCGCAACCA
TGAGAGGGCCGGCCGGCGGGACCTCCTCCACGGAGCCGATGCCCTCCGCC
TCGACAAACTCCGCCAGCAGCGCGTCAATCTCCTGCGTGTGCGCCCGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:818553..819600- >mRNA_S-ischiensis_contig8.19345.1 ID=mRNA_S-ischiensis_contig8.19345.1|Name=mRNA_S-ischiensis_contig8.19345.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2022bp|location=Sequence derived from alignment at S-ischiensis_contig8:818553..819600- (Schizocladia ischiensis KU_0333)
ATGACGGAGGTAGGCCCCACCCAACAGCGACGCGTGGGGCTGCCCCAACA
CGTAGCCCGGGGGCAACGCAAGGATGACGGAGGTAGGCCCCACCCAACAG
CGACGCGTGGGGCTGCCCCAACACGTAGCCCGGGGGCAACGCAAGGCCGG
TGCCGCCAGCTGGTGGCCCTGGCCATCGGCGTCGGCGGAGGCCATGGCGA
CGCTATGCAGAGGCCCCCCGGTCCCGGACGCCGCCACTGCCACCGCCCCC
CCCGCGGCGGGGGGGACGGGGGTGGTCGCGCCACGCGGGGACCCGAGCGC
GGTTGCAGACATGAGCGAGTCCGCCGAGGGCAACCGCGGCATATTACGCC
CCGCGTGCGGGTCACGGAGGTGGGCCCGCTCGGGCATCACGACCGGCCCC
GCGGGCCCGGCGGCCAGCCTCGACAGCGACCACAGCGGTGGCGGCGGCAC
CAGCGAGTGGCCGCCGCTGCTGGGGACGGTGCTACCACGGCCCGGGGGCA
GTACCTGCGCTACCGGTCCAGGGGGGCAAGTAGCCGCAGCGGCAGCTGCG
GCGGCTGCGGCGGCGGCGCCCCCCTCAGCCGGGGCAGTATCCGCCGCGGC
CGTTGCTGCGGTCGGCAGGGTTGTGTGGCAAACAGCGCTTGGCTCGGATG
ACCGCACAGCCACCGCTGCCGCCGCCGCCGTCGTCGTTGCCGCCGTCGCC
GCCGCCGCTGCCTCCGTTGCCGCCGCCCCCGTCGCCGCCTGCGACGTGGT
AGGCTGGGCGGCGTGGGCGGTGGCGGCGGCGGCGGCGGCATCGGCCTGGG
CTGCCGCCTCCTTGATGGAGGCTTCGAGCGCTTGCGCGGCGGCCTCGGCC
TTGGCCACGGCGCCCGGTTCCCCCTGGGCGACCGCCTGCTGCAGAAGCGC
CAGCTGCAGTGCGTGCTGCTGCTGCTGCACCGCCGGCGGGAGCATCTGGA
ACAGGTCCGGCGGCAGGGCGAGGGCGTCCGCAACCATGAGAGGGCCGGCC
GGCGGGACCTCCTCCACGGAGCCGATGCCCTCCGCCTCGACAAACTCCGC
CAGCAGCGCGTCAATCTCCTGCGTGTGCGCCCGGCCGGTGCCGCCAGCTG
GTGGCCCTGGCCATCGGCGTCGGCGGAGGCCATGGCGACGCTATGCAGAG
GCCCCCCGGTCCCGGACGCCGCCACTGCCACCGCCCCCCCCGCGGCGGGG
GGGACGGGGGTGGTCGCGCCACGCGGGGACCCGAGCGCGGTTGCAGACAT
GAGCGAGTCCGCCGAGGGCAACCGCGGCATATTACGCCCCGCGTGCGGGT
CACGGAGGTGGGCCCGCTCGGGCATCACGACCGGCCCCGCGGGCCCGGCG
GCCAGCCTCGACAGCGACCACAGCGGTGGCGGCGGCACCAGCGAGTGGCC
GCCGCTGCTGGGGACGGTGCTACCACGGCCCGGGGGCAGTACCTGCGCTA
CCGGTCCAGGGGGGCAAGTAGCCGCAGCGGCAGCTGCGGCGGCTGCGGCG
GCGGCGCCCCCCTCAGCCGGGGCAGTATCCGCCGCGGCCGTTGCTGCGGT
CGGCAGGGTTGTGTGGCAAACAGCGCTTGGCTCGGATGACCGCACAGCCA
CCGCTGCCGCCGCCGCCGTCGTCGTTGCCGCCGTCGCCGCCGCCGCTGCC
TCCGTTGCCGCCGCCCCCGTCGCCGCCTGCGACGTGGTAGGCTGGGCGGC
GTGGGCGGTGGCGGCGGCGGCGGCGGCATCGGCCTGGGCTGCCGCCTCCT
TGATGGAGGCTTCGAGCGCTTGCGCGGCGGCCTCGGCCTTGGCCACGGCG
CCCGGTTCCCCCTGGGCGACCGCCTGCTGCAGAAGCGCCAGCTGCAGTGC
GTGCTGCTGCTGCTGCACCGCCGGCGGGAGCATCTGGAACAGGTCCGGCG
GCAGGGCGAGGGCGTCCGCAACCATGAGAGGGCCGGCCGGCGGGACCTCC
TCCACGGAGCCGATGCCCTCCGCCTCGACAAACTCCGCCAGCAGCGCGTC
AATCTCCTGCGTGTGCGCCCGG back to top
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