mRNA_S-ischiensis_contig8.19332.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig8.19332.1
Unique NamemRNA_S-ischiensis_contig8.19332.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig8.19332.1 vs. uniprot
Match: A0A6H5L0V5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0V5_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 1.150e-111
Identity = 177/260 (68.08%), Postives = 212/260 (81.54%), Query Frame = 1
Query:    1 FVHLGCVGEGGFSVVWKVRARGTGRMSAVKRSKREFRSVRERDRALQEARTLQCLGGHPSVLRFERAWQEDGHFCLQTELCELGSLKDFMERLPVGVVIPERALWQVLHDVGEGLRHIHGRALVHLDVKPSNVLIAEDG-RLKIADFGMATVYGTD---VGDGQEGDTRYLARELLSSTERLPSADIFSLGLTLFEMAARVRLPGEGDTWHQLREGRSGLLPEGRYSTQLGDVVAQMMHPDPGQRPTAEDLCAHPRVAEV 768
            FV +G +GEGGFSVVWKVRA+GTGR+ A+KRSKREFR  R+RDR L EA+ LQ LG HP V+RFERAWQE+GHFCLQTELCELG+LKDF+ERLP    IPE A+WQVL D+G+ L H+H   LVHLDVKPSN+LI ++G RLK+ADFGMAT YG     +GDGQEGDT Y+A+ELLSST RLPSAD+FSLGLT++E+A R+ LPG+G+ WH +R+GR+  LP  R S  LGDV+ Q+MHPDP QRPTA+ LC HPRVA V
Sbjct: 1182 FVQMGPIGEGGFSVVWKVRAKGTGRLYAIKRSKREFRGKRDRDRCLLEAKALQRLGQHPGVIRFERAWQEEGHFCLQTELCELGTLKDFLERLPSRREIPESAVWQVLQDIGQALSHVHAMGLVHLDVKPSNLLIGDEGGRLKLADFGMATAYGEGMEGIGDGQEGDTLYMAKELLSSTARLPSADMFSLGLTVYEVATRIELPGDGEDWHAMRDGRAVGLPSSR-SRDLGDVLRQLMHPDPRQRPTADALCEHPRVANV 1440          
BLAST of mRNA_S-ischiensis_contig8.19332.1 vs. uniprot
Match: B8LBM9_THAPS (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBM9_THAPS)

HSP 1 Score: 208 bits (529), Expect = 1.130e-62
Identity = 124/274 (45.26%), Postives = 168/274 (61.31%), Query Frame = 1
Query:    1 FVHLGCVGEGGFSVVWKVRARGTGRMSAVKRSKREFRSVRERDRALQEARTLQCLGGHPSVLRFERAWQEDGHFCLQTELCE-------LGSLKDFMERLPVGVVIPERALWQVLHDVGEGLRHIHGRALVHLDVKPSNVLIAEDGR----LKIADFGMATVYGTDVGDGQEGDTRYLARELLSSTERLPSADIFSLGLTLFEMAARV--RLPGEGDTWHQLREGRS-GLLPEGRYSTQLGDVVAQMMHPDPGQRPTAEDLCAHPRVAEVAATS 780
            F +LG +G G F+ V+KVR++      A+K+++R+FR V++R+RA+ E +T+Q  G +  +L F RAWQE+G+F  QTELC         G   +   RL     +PERA+WQV HD+  GL HIH   +VH D+KPSN+    + R     KI DFG+A   GT   DGQEGDT Y+  ELLS+  + P ADIFSLGLTL+E+AA V   +P EGD WH+LR G     +P  R S  LG ++  M+ PD  QRP+AED+  H  V   +A S
Sbjct:    5 FNNLGILGSGAFADVYKVRSKRDRGFYAIKQARRQFRGVKDRERAMTEVQTMQRYGLY--LLFFIRAWQENGYFFCQTELCSRATPTPSTGDSANVQNRL-----LPERAIWQVCHDISRGLFHIHSHGMVHYDIKPSNIFFVSNPRWGTICKIGDFGLAGDIGTK-DDGQEGDTAYMPNELLSTCVKHPGADIFSLGLTLYEIAASVDWTVPREGDRWHELRRGSHVPEIPTSR-SDSLGKLIQLMLQPDAKQRPSAEDISEHIDVKRASALS 269          
BLAST of mRNA_S-ischiensis_contig8.19332.1 vs. uniprot
Match: A0A8K1FF92_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF92_PYTOL)

HSP 1 Score: 216 bits (549), Expect = 1.070e-61
Identity = 118/256 (46.09%), Postives = 159/256 (62.11%), Query Frame = 1
Query:   10 LGCVGEGGFSVVWKVRARGTGRMSAVKRSKREFRSVRERDRALQEARTLQCLGGHPS----VLRFERAWQEDGHFCLQTELCELGSLKDFMERLPVGVVIPERALWQVLHDVGEGLRHIHGRALVHLDVKPSNVLIAEDGRLKIADFGMATVYG--TDVGDGQEGDTRYLARELLSSTERLPSADIFSLGLTLFEMAARVRLPGEGDTWHQLREGRSGLLPEGRYSTQLGDVVAQMMHPDPGQRPTAEDLCAHPRV 759
            +G +G G  + V KV ++      AVK++K + RS RERD  LQE   ++ L    +    ++R+ RAWQ DG   +QTELCE G+L+DF+  L  G  IPE  LW ++HD+ +GL  +H    +HLD+KP N+ I  +G LKI DFGMA  +   ++    QEGD  Y+A+ELLSS ERLPSADIF LG+ + E+A  V LP  G+ WH LREG+   LP   YS  L  ++A MMHPDP  RPTA  + AH +V
Sbjct:  260 VGWLGAGVSAEVLKVYSQRNKEHFAVKKTKHQLRSERERDMLLQEIVIIEHLAASGASFDHIVRYYRAWQMDGFLFVQTELCEGGNLRDFLT-LREGSSIPEDCLWSIIHDIAQGLEVVHSNQTIHLDIKPDNIFITREGVLKIGDFGMAHEFSKPSNRDADQEGDAVYMAKELLSSQERLPSADIFCLGIMMLELATAVELPTSGEEWHALREGQLPALPA-EYSGDLSALIAHMMHPDPSSRPTASSILAHSQV 513          
BLAST of mRNA_S-ischiensis_contig8.19332.1 vs. uniprot
Match: A0A329RW56_9STRA (Protein kinase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RW56_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.480e-59
Identity = 122/258 (47.29%), Postives = 163/258 (63.18%), Query Frame = 1
Query:   19 VGEGGFSVVWKVRARGTGRMSAVKRSKREFRSVRERDRALQEARTLQCLGGH----PSVLRFERAWQEDGHFCLQTELCELGSLKDFMERLPVGVVIPERALWQVLHDVGEGLRHIHGRALVHLDVKPSNVLIAEDGRLKIADFGMA------TVYGTDVGDGQEGDTRYLARELLSSTERLPSADIFSLGLTLFEMAARVRLPGEGDTWHQLREGR-SGLLPEGRYSTQLGDVVAQMMHPDPGQRPTAEDLCAHPRV 759
            +G G  + V+KVR   +G + AVK+SK+E R+ RERD   QE   L+ L        +++R+ +AWQE+G F LQ ELCE G+L+DF+      V +PE  +W +L DV  GL+ +    LVHLD+KP N+ I EDGRLKI DFGMA      T   + + D  EGD +Y+A+ELLSS +RLPSADIF LG+ L E+A  + LP  GD WH LR G    L PE  YS +L +++ QMMHPDP +RP+A D+    RV
Sbjct:  176 LGAGVSAEVFKVRDPQSGALFAVKKSKQELRNDRERDLLAQEIVILEKLSSSRHNFDNIVRYYQAWQENGFFFLQMELCEGGTLQDFITTRNQEV-LPESYVWSILRDVASGLKILDEHGLVHLDIKPDNIFITEDGRLKIGDFGMAGKVVTSTKASSKISD-LEGDAKYMAKELLSSADRLPSADIFCLGIMLLEIATGMVLPEAGDKWHDLRNGDLPSLSPE--YSKELSEMIRQMMHPDPTKRPSAADILKSSRV 429          
BLAST of mRNA_S-ischiensis_contig8.19332.1 vs. uniprot
Match: A0A836CB62_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB62_9STRA)

HSP 1 Score: 201 bits (512), Expect = 2.920e-59
Identity = 127/287 (44.25%), Postives = 162/287 (56.45%), Query Frame = 1
Query:    1 FVHLGCVGEGGFSVVWKVRARGTGRMSAVKRSKREFRSVRERDRALQEARTLQCLG---------GHPSVLRFERAWQEDGHFCLQTELCELGSLKDF--MERLPVGVVIPERALWQVLHDVGEGLRHIHGRALVHLDVKPSNVLIAEDGRLKIADFGMATVY--GTDVGD---------GQEGDTRYLARELLSSTERLPSADIFSLGLTLFEMAARVRLPGEGDTWHQLREGRSGL-------LPEGRYSTQLGDVVAQMMHPDPGQRPTA-EDLCAHPRVAEVA 771
            FV LG VG G F+ V +   R  GR  AVKR+   FR   +R RAL E   L+ +          G   V+ F RAWQE GH   Q ELCELGS++     ++       PE ALW+V HDV   LR IH   +VHLD+KPSN+L++ DGR+K+ DFG+AT    G+D             +EGD RY+A ELL+S ERLPSAD+FSLG+TL+E+A  ++LP  G+ WH LR G  G        LP+        D+VA +M P   QRP+A E L   P VA VA
Sbjct:   61 FVDLGSVGAGSFAEVRRALCRADGRQYAVKRAAHAFRGRADRARALAEVHALRRVAARGGSSGXXGSAHVVAFVRAWQEGGHLYAQLELCELGSVRASPPQQQQHQRRGFPEAALWKVAHDVAAALRAIHAAGIVHLDIKPSNLLLSADGRIKVGDFGVATASTAGSDSXXXXXXXXXALAEEGDARYMAPELLASAERLPSADMFSLGITLYELATALQLPERGELWHALRGGSGGAGRAPPPPLPQALLPA-FHDLVAALMAPSAAQRPSAAEVLEGQPEVAAVA 346          
BLAST of mRNA_S-ischiensis_contig8.19332.1 vs. uniprot
Match: G4ZPH2_PHYSP (Protein kinase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZPH2_PHYSP)

HSP 1 Score: 204 bits (519), Expect = 4.060e-59
Identity = 116/258 (44.96%), Postives = 159/258 (61.63%), Query Frame = 1
Query:   19 VGEGGFSVVWKVRARGTGRMSAVKRSKREFRSVRERDRALQEARTLQCLGGHP----SVLRFERAWQEDGHFCLQTELCELGSLKDFMERLPVGVVIPERALWQVLHDVGEGLRHIHGRALVHLDVKPSNVLIAEDGRLKIADFGMATVYGTD------VGDGQEGDTRYLARELLSSTERLPSADIFSLGLTLFEMAARVRLPGEGDTWHQLREG-RSGLLPEGRYSTQLGDVVAQMMHPDPGQRPTAEDLCAHPRV 759
            +G G  + V+KVR   +G + A+K+S++E R+ RERD   QE   L+ L        +++R+ +AWQE+G F LQ ELCE G+L+DFM        +PE  +W +L D+  GL+ +H   +VHLDVKP N+ I EDGRLKI DFGMA    T        GD  EGD +Y+A+ELLSS +RLPSADIF LG+ + E+   + LP  G  WH+LREG      PE  YS  L  ++ QMM PDP +RP+A  +  +PR+
Sbjct:  177 LGAGVSAEVFKVRDPDSGELFAIKKSQQELRNDRERDLMSQEIGVLEKLAASQHNFDNIVRYYQAWQENGFFFLQMELCEGGTLQDFMATRNRDENLPENYVWNILRDIASGLKVLHDHDIVHLDVKPDNIFITEDGRLKIGDFGMAGKVVTSSKPSSQFGD-LEGDAKYMAKELLSSADRLPSADIFCLGIMMLEIVTGMTLPEAGKDWHELREGVLPSFSPE--YSEDLSALIRQMMDPDPARRPSAAAILKNPRM 431          
BLAST of mRNA_S-ischiensis_contig8.19332.1 vs. uniprot
Match: W2QLT1_PHYPN (WEE protein kinase n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QLT1_PHYPN)

HSP 1 Score: 201 bits (512), Expect = 6.080e-58
Identity = 117/257 (45.53%), Postives = 159/257 (61.87%), Query Frame = 1
Query:   19 VGEGGFSVVWKVRARGTGRMSAVKRSKREFRSVRERDRALQEARTLQCLGGH----PSVLRFERAWQEDGHFCLQTELCELGSLKDFMERLPVGVVIPERALWQVLHDVGEGLRHIHGRALVHLDVKPSNVLIAEDGRLKIADFGMA-----TVYGTDVGDGQEGDTRYLARELLSSTERLPSADIFSLGLTLFEMAARVRLPGEGDTWHQLREGR-SGLLPEGRYSTQLGDVVAQMMHPDPGQRPTAEDLCAHPRV 759
            +G G  + V+KVR   +G + AVK+SK+E R+ RERD   QE   L+ L        +++R+ +AWQE+G F LQ ELCE G+L+DF+        +PE  LW +L DV  GL  +    LVHLD+KP N+ I  DGRLKI DFGMA     +   +      EGD +Y+A+ELLSS +RLPSADIF LG+ + E+A  + LP  G  WH LR+G    L PE  YS +LG+++ QMMHPDP +RP+A  +  + RV
Sbjct:  198 LGAGVSAEVFKVRDPKSGELFAVKKSKQELRNDRERDLLAQEITILEKLASSRHNFDNIVRYYQAWQENGFFYLQMELCEGGTLQDFIMTRN-REALPESYLWSILRDVASGLEVLGDHGLVHLDIKPDNIFITGDGRLKIGDFGMAGKVVISAKASRKISDLEGDAKYMAKELLSSADRLPSADIFCLGIMMLEIATGMVLPEAGKKWHDLRDGDLPSLSPE--YSKELGEIILQMMHPDPTKRPSAAAIMKNSRV 451          
BLAST of mRNA_S-ischiensis_contig8.19332.1 vs. uniprot
Match: A0A225X3Y1_9STRA (WEE protein kinase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3Y1_9STRA)

HSP 1 Score: 201 bits (510), Expect = 6.650e-58
Identity = 119/250 (47.60%), Postives = 160/250 (64.00%), Query Frame = 1
Query:   19 VGEGGFSVVWKVRARGTGRMSAVKRSKREFRSVRERDRALQEARTLQCLGGHP----SVLRFERAWQEDGHFCLQTELCELGSLKDF-MERLPVGVVIPERALWQVLHDVGEGLRHIHGRALVHLDVKPSNVLIAEDGRLKIADFGMA------TVYGTDVGDGQEGDTRYLARELLSSTERLPSADIFSLGLTLFEMAARVRLPGEGDTWHQLREGRSGLL-PEGRYSTQLGDVVAQMMHPDPGQRPTA 732
            +G G  + V KVR    G + AVK+SK+E RS RERD   QE   L  L        +++R+ +AWQE+G F LQ ELC+ G+L+DF MER   G++  E  LW +L D+  GL+ +H   +VHLD+KP N+ I EDGRLKI DFGMA      T   + + D  EGD +Y+A+ELLSS++R+PSADIF LG+ + E+A  + LP +G  WH LREG    L PE  YS +L  ++ QMMHPDP +RP+A
Sbjct:  171 LGAGVSAEVLKVRDPKNGAVFAVKKSKQELRSDRERDLLAQEIAVLDKLTASRHNFNNIVRYYQAWQENGFFFLQLELCDGGTLQDFIMERNGEGLL--ENDLWSILRDIVSGLKVLHEHDIVHLDIKPDNIFITEDGRLKIGDFGMAGKVIISTKTSSKISD-LEGDAKYMAKELLSSSDRVPSADIFCLGIMMLEIATGMGLPIDGKEWHDLREGGLPFLSPE--YSDELNKMIRQMMHPDPTKRPSA 415          
BLAST of mRNA_S-ischiensis_contig8.19332.1 vs. uniprot
Match: A0A6A4A4I7_9STRA (Protein kinase domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A4I7_9STRA)

HSP 1 Score: 204 bits (519), Expect = 9.130e-58
Identity = 119/257 (46.30%), Postives = 158/257 (61.48%), Query Frame = 1
Query:   19 VGEGGFSVVWKVRARGTGRMSAVKRSKREFRSVRERDRALQEARTLQCLGGHPS----VLRFERAWQEDGHFCLQTELCELGSLKDFMERLPVGVVIPERALWQVLHDVGEGLRHIHGRALVHLDVKPSNVLIAEDGRLKIADFGMA----TVYGTD--VGDGQEGDTRYLARELLSSTERLPSADIFSLGLTLFEMAARVRLPGEGDTWHQLREGRSGLLPEGRYSTQLGDVVAQMMHPDPGQRPTAEDLCAHPRV 759
            +G G  + V+K R    G + A+K+SK E R+ RERD   QE   L+ L         ++R+ +AWQE+G F LQ ELCE G+L+DFM        +PE+ +W ++ DV  GL+ +H   +VHLDVKP N+ I EDGRLKI DFGMA    T  GT   +GD  EGD +Y+A+ELLSS +RLPSADIF LG+ + E+   V LP  G  WH +REG     P   YS  LG ++ +MM PDP +RP+A  L  +PRV
Sbjct:  190 LGAGVSAEVFKSRDPNGGELFAIKKSKLELRNDRERDIMAQEIVVLEKLTASQHNFEHIVRYYQAWQENGFFYLQMELCEGGTLQDFMRMRNREEDLPEKYVWVIMRDVTSGLKVLHDHDIVHLDVKPDNIFITEDGRLKIGDFGMAGKVVTSSGTSSQIGD-LEGDAKYMAKELLSSADRLPSADIFCLGIMMLEIVTGVTLPEAGKEWHDIREGILPPFPP-EYSYDLGALIRKMMDPDPARRPSAAALLKNPRV 444          
BLAST of mRNA_S-ischiensis_contig8.19332.1 vs. uniprot
Match: Q4RG27_TETNG ((spotted green pufferfish) hypothetical protein n=2 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4RG27_TETNG)

HSP 1 Score: 197 bits (500), Expect = 1.470e-57
Identity = 112/260 (43.08%), Postives = 152/260 (58.46%), Query Frame = 1
Query:    1 FVHLGCVGEGGFSVVWKVRARGTGRMSAVKRSKREFRSVRERDRALQEARTLQCLGGHPSVLRFERAWQEDGHFCLQTELCELGSLKDFMERLPVGVVIPERALWQVLHDVGEGLRHIHGRALVHLDVKPSNVLIAEDGRLKIADFGMATVYGTDVGDG---------QEGDTRYLARELLSSTERLPSADIFSLGLTLFEMAARVRLPGEGDTWHQLREGRSGLLPEGRYSTQLGDVVAQMMHPDPGQRPTAEDLCAHP 753
            F +LG +G G F  V+KVR+   GR  AVKRS   FR   ER+R+++EAR  + L  HP +L FE AW++ G   +QTELC   SL   +E  P+G  + E   W  L D+   L H+H +  VHLD+KP+NVL+   GRLK+ DFG+        GDG         QEGD RY+A ELL   E  P+AD+FSLG+T+ E+A  + +P  G+ W QLR+GR      G  S +L  V+  M+ P+P +RPT  +L A P
Sbjct:  109 FTNLGLLGRGSFGEVYKVRSNKDGRQYAVKRSAHRFRGNSERNRSVREARNHERLCPHPHILNFESAWKKCGRLYIQTELCST-SLLLHVENQPLG--LDEPTAWGYLCDLLSALEHLHSQGFVHLDLKPANVLVTPSGRLKLGDFGLLLELKRTTGDGAQGKVKEDMQEGDPRYMAPELLRG-EYGPAADVFSLGVTILELACNMEVPNGGEGWQQLRQGRLPSQFTGGLSDELQSVLQMMLKPEPSERPTVSELLALP 364          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0V5_9PHAE1.150e-11168.08Protein kinase domain-containing protein n=2 Tax=E... [more]
B8LBM9_THAPS1.130e-6245.26Protein kinase domain-containing protein (Fragment... [more]
A0A8K1FF92_PYTOL1.070e-6146.09Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A329RW56_9STRA1.480e-5947.29Protein kinase domain-containing protein n=2 Tax=P... [more]
A0A836CB62_9STRA2.920e-5944.25Kinase-like domain-containing protein n=1 Tax=Trib... [more]
G4ZPH2_PHYSP4.060e-5944.96Protein kinase domain-containing protein n=1 Tax=P... [more]
W2QLT1_PHYPN6.080e-5845.53WEE protein kinase n=7 Tax=Phytophthora parasitica... [more]
A0A225X3Y1_9STRA6.650e-5847.60WEE protein kinase n=1 Tax=Phytophthora megakarya ... [more]
A0A6A4A4I7_9STRA9.130e-5846.30Protein kinase domain-containing protein n=5 Tax=P... [more]
Q4RG27_TETNG1.470e-5743.08(spotted green pufferfish) hypothetical protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:758164..762604 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score364.4
Seed ortholog evalue4.6e-98
Seed eggNOG ortholog2880.D7FKY7
KEGG koko:K06633
KEGG Pathwayko04110,ko04114,ko04914,map04110,map04114,map04914
EggNOG free text desc.protein kinase activity
EggNOG OGsKOG0601@1,KOG0601@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko01009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein kinase
Ec32 orthologEc-21_002340.1
Exons5
Model size815
Cds size813
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19332.1prot_S-ischiensis_contig8.19332.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig8 758164..762604 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817275.352378-CDS-S-ischiensis_contig8:758163..7582801622817275.352378-CDS-S-ischiensis_contig8:758163..758280Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 758164..758280 -
1695740987.6039069-CDS-S-ischiensis_contig8:758163..7582801695740987.6039069-CDS-S-ischiensis_contig8:758163..758280Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 758164..758280 -
1622817275.3654287-CDS-S-ischiensis_contig8:759114..7592561622817275.3654287-CDS-S-ischiensis_contig8:759114..759256Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 759115..759256 -
1695740987.6163929-CDS-S-ischiensis_contig8:759114..7592561695740987.6163929-CDS-S-ischiensis_contig8:759114..759256Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 759115..759256 -
1622817275.3770826-CDS-S-ischiensis_contig8:760152..7602911622817275.3770826-CDS-S-ischiensis_contig8:760152..760291Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 760153..760291 -
1695740987.6260076-CDS-S-ischiensis_contig8:760152..7602911695740987.6260076-CDS-S-ischiensis_contig8:760152..760291Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 760153..760291 -
1622817275.38901-CDS-S-ischiensis_contig8:760985..7611241622817275.38901-CDS-S-ischiensis_contig8:760985..761124Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 760986..761124 -
1695740987.636607-CDS-S-ischiensis_contig8:760985..7611241695740987.636607-CDS-S-ischiensis_contig8:760985..761124Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 760986..761124 -
1622817275.4007323-CDS-S-ischiensis_contig8:762328..7626041622817275.4007323-CDS-S-ischiensis_contig8:762328..762604Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 762329..762604 -
1695740987.6472273-CDS-S-ischiensis_contig8:762328..7626041695740987.6472273-CDS-S-ischiensis_contig8:762328..762604Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 762329..762604 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig8.19332.1

>prot_S-ischiensis_contig8.19332.1 ID=prot_S-ischiensis_contig8.19332.1|Name=mRNA_S-ischiensis_contig8.19332.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=271bp
FVHLGCVGEGGFSVVWKVRARGTGRMSAVKRSKREFRSVRERDRALQEAR
TLQCLGGHPSVLRFERAWQEDGHFCLQTELCELGSLKDFMERLPVGVVIP
ERALWQVLHDVGEGLRHIHGRALVHLDVKPSNVLIAEDGRLKIADFGMAT
VYGTDVGDGQEGDTRYLARELLSSTERLPSADIFSLGLTLFEMAARVRLP
GEGDTWHQLREGRSGLLPEGRYSTQLGDVVAQMMHPDPGQRPTAEDLCAH
PRVAEVAATSAVPLSVAAAAG
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mRNA from alignment at S-ischiensis_contig8:758164..762604-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig8.19332.1 ID=mRNA_S-ischiensis_contig8.19332.1|Name=mRNA_S-ischiensis_contig8.19332.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4441bp|location=Sequence derived from alignment at S-ischiensis_contig8:758164..762604- (Schizocladia ischiensis KU_0333)
TTTGTGCACCTGGGGTGTGTTGGGGAGGGCGGTTTCTCCGTGGTGTGGAA GGTGCGGGCGCGGGGCACGGGTCGGATGTCGGCGGTGAAGCGCAGCAAGC GGGAGTTCCGCAGCGTGCGGGAGAGGGACCGCGCGCTGCAGGAGGCACGG ACGCTGCAGTGCCTGGGGGGGCACCCCTCGGTGCTGCGGTTCGAGCGGGC GTGGCAGGAGGACGGCCACTTCTGCCTGCAGACGGAGCTGTGCGAGCTGG GCAGCCTCAAGGACTTCATGGAGCGGGTGAGTTTTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGCGCGCGCGCTTGTGTGTGTGCGTGTGCGTCTCGG TTTCGTGCCGACGGGGCGTGTGGAAGGCCATGTGTTGCGCACTTGCGGAA AAAGAGCTCCAAGCGCGCTTCATTTCGCCCGGGGCGCCTCGCGGCGGGGA GAGCAGGGGGGGGAGGGCCTTCTGCGTCACTCGCCGCAACAGGTTTGTAG TTCCAAGCACAGCGCAGCTTGGGCAATGTTGATAGGTTAGCGCCACGTAT CGATGATATTTTATGTTTATCAGGCGGGGATGCGGGAGGGAAAATGCTCC GTCGTCAGCGGCGCGTGGTCAATGGTCTCGGGACTACAGCAAGCACACCA TGAGCACATATATATGTATGTACATGTACTTCGTAAGTATTATACTCCTC CCACCCTGGCTCTGCCAGGGGAGGGAGGGGACCTGCTCCGTCTCGGACGA GGCGCGGGGTCAATGTCTCGGGACTACGGCAAGCACCACGTGAGTACATA TATATATACTCGGGTACATATATGTCAGGCGGGAATGTCTACACTTTGTA CATATATACATGTACTCATTGTCTTGTCTTGCGACAGAACCTTGCGTGCT TTACCGACAGCCCTAGGTAAAAATACTTCGGGTTTGCCCTCCGACAGGAG TAGCTATTTAGCCATGGGCTCTCGCATCCCAACTAGGCCGTGACGGAGCA TACTTCGAAGTACCGGGTTTGCACCGGCCAGCCCGCGCACTGGCCAAGCC CGGAATGCCATGATGGCTTGGCGTCGGCAAACCGGATGAGGGGCCGTTCG CTAGCCGACGATAAGGCGTAGCCATCGGCGACTACTTGTGAGTCTGCAGA GTTGCTCTTGGGCGCTCCATCACCCTATTGGTCACGGGGGGAACAAGCGG CAAAATTGATCCCGACCGCTACAATAGGTTGCCGGACAATGCTCTTAGTC GATGTGTGTTCGTTGTTGATCGATTTTACTACTTGAAGTCACTGCGATAA ACTGATAGACTGTCGTCTCGCTATGTTTCAACGACAAATAGACGGTTCTG TTTCGACGTATATATTGATCGGACTCAATACGCCTCCGGCCCCTGGCAGA GTGCATTTTAACGCTCAGAAAACAGCGCCCTCCACCCTCCTCCTCCCCCT CCGTCCCTGCCCCCCTCGGTCTCCCCGCAGCTGCCGGTGGGAGTGGTGAT CCCTGAGCGGGCGCTGTGGCAGGTGCTGCACGACGTGGGGGAGGGCCTGC GCCACATCCACGGGCGGGCCCTGGTGCACCTGGACGTCAAGCCATCCAAC GTGCTCATCGCAGAGGACGGTGAGAGGTGGCGGGGGCGGTGGCGGCGGCG CGCGGCGCTAGGTGTTTGTCCATTCGTGTTGTGTGTGTGTGTGTGTGTTT TCTCTATTTAATTTGGCAACGCGCCCAGACCCGTGGGCAGCCCCTTTGTT CTCGAGCTGAAAGGGGGATCGGCCGAGCCTGCTAGCCCGCTGTATACCTG TATCGCCAAACTTGAAAGTGCAGAAGGTGTTTTTGGTAGTGTCGTCCGAC AGACCCTGCCCCCGTCCTCCTAAACTCCCTGCCGGTATGGTCCGCCTGAT CCCCACGGCCACTGCCTCCCGCCCCCTTCTCCTCCCCGCCCCCCCCGCCG CTCCTCCCCTCGTGGGATCTCTGTGCACTGTATCTGTGCGCCTGTGTGGT CATGGCCACCTGTCTGTCTGTCTCCCTGCCTGTCTGTCTATCTGTCTGCC TGCTTGTCTGGCTGGCTGGCTGGCTGCCTGGCTGCCTGCTGCCTGCCTGC CTGCCTGCTTTTCCATCTACTACCTCCCTGCCTGGCACGTGTGTATCTGT GATTCATATAAATGGTAACCAGGCACAATCGCACGTGTGCGAGATTGACT GCTCTAGTATTTGTAGTTGTCCCATTTAAGAATTGAGTGTTCTTACATTG GCGATTATCACATCAAGGACCTAAAAAATGTGCTGTCGGGCCGGGCCGGG CTGGCCCTTGCAGGACGCCTCAAGATTGCCGACTTTGGCATGGCCACAGT CTACGGCACGGATGTGGGGGACGGGCAGGAGGGGGACACACGCTACCTGG CCCGGGAGCTCCTCTCCTCCACGGAACGCCTCCCATCTGCTGACATATTC AGGCAAGTACTAGTACTTCGAAGTACTTGTCCTTGTGCACCGGCTATCCA TCTGTCCGTCCGTCAGTCCCTCTCTCCTCTGTCCCTGCCTCTGTCCCTCC CTCTCCCTCCCTCCCTCCCTCCTTCCCTCTGTCCGCCCCTCACTCCGTCC CTCCCATGCCTGCCCTCCTCTCTCCCTGCCTCACGCACTCACTAGCAGTG TGCAGCCAGAAGAGCGATCGGACGTAGAGTACGGACGGTACTGTGCTCAT ACTCGAGTACACATTATCACAAGTGCGCCTTTTATTGCGCGCGGCACTCT CTCGTACCGTCCGCGTCCAATACCGTCCACAAGTAGCCTGAACAGTGGAT AGTGCATGTCGAACCAAAACGACAGCCATCGACGGCGACGCTCACGCTTG AACCTTGAGCCACACACGCGCGTGCACGCAGTGTTTGGATAACGTATGGG CATCGATCGTAAATGTATCACCATGAAATGTCTAGTGTACATGACATGTC TAGGTAGACAGGTTGCAGGGAAACTATCGAGGGAACTATCGACCGTTTTA CGGGCCCTCAAACAGCACCTATCCACGTGCTTGGTTTTAGTATGGGCCAA AACTATCTGTGCTAGATGCAGTAGCGGTCGATAGACACCAAGAACCGAAA TACCGACCTGTCGATGGATGATACAGATCATACCCCGCCGATATTCCGCC GCTGCACACACCCATACACCCACACCCACACATGTACAGCATCGCATGTA CTCACGCGCGTGCGTGTCGTTCCGGCCCGCGCTGTGCCCCCGGGCTCCAC CCGCTCCCTCTTACCACCACACTCGTTTGCGTCTGTGTTGCGTGCCGCTG CTCGGGCGGGCGGGGCTGCTGGGCTGGGTTGGGCTGTTGCGCGCTCAGCC TCGGACTGACGCTCTTTGAGATGGCGGCGAGGGTGCGGCTGCCAGGCGAG GGGGACACATGGCATCAGCTCAGGGAGGGCCGCTCAGGGTTGCTGCCGGA GGGACGCTACTCCACGCAGCTGGGCGATGTGGTGGCACAGGTACTACATA TTCATCTACAGTACTGTCTCTGTCTCTCTCTCTCTCACCCTCTGCCTGTT TCCCTACCTCTCTAGAGCTCTATCCCCTCTCCCGCTCTGTCCGTCTCTGC CGCTGCCTCTCTCTCACTCTCCCTACGTCTCCAGAGCGAGAGCTCTACAC GCGCTTCCTCCCCTATCCATCGCTTTTGAGAGTTGAGTGTGTTTCTCGGG GCTCCAGGGCCTGGGATGGGTGTCTACTGTGCCGGGGCAAGCGCCGCCCC CCATGCACCACTGCAAAGCAGGGGCGCGCCCGCACGCCATGCCACTGTAG CTACTGTAGTGATGTGAGCATATGTATGTACGAGTACTTCGAAGTACTCA CATGTGCTTGCCGTATTCCCCAGACCATCGACCACGCGCCTCGATCGAGA CGGAGCAGGCCCCCTCCCTCCCCTGGCAGAGCCAGGGTCGGAGGAGGGGG TGGCCACCCCACCGCCAGAGGCGGAGGGGTGGCCAAGTCCATATCCCCTG CATCCCCGACTCCTGAGAGTCCAGGCGGGGGGGGGGGGGTCCCTCACCGT GCCGGGGCACTGCGGGGGATCCAAGATACCCGTCTATGCTACCCACTTGC TCCAACCGGACACTCCGCACAGACACCAGAAACTCACACACAGCACACTC GACACAACTCTGTTCCTCCGCTGGCCAGCCACACGTGAACATGGCTGTAG CTATATTGAGTTCCGCTGGCACAGGCTATATTCTAGGTGCGCTTGGTGTG CTCCTACTCACTCTTCGTGCTTCAAAGTACTTGGAAGAACTCACCACGTG CCCCCAACAAAAACCTTCCATCAGATGATGCACCCAGACCCTGGCCAGCG CCCCACAGCGGAGGACCTGTGCGCCCACCCGCGTGTGGCCGAGGTGGCTG CAACCTCCGCTGTGCCCTTGTCTGTGGCGGCTGCGGCGGGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig8:758164..762604-

>mRNA_S-ischiensis_contig8.19332.1 ID=mRNA_S-ischiensis_contig8.19332.1|Name=mRNA_S-ischiensis_contig8.19332.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1626bp|location=Sequence derived from alignment at S-ischiensis_contig8:758164..762604- (Schizocladia ischiensis KU_0333)
TTTGTGCACCTGGGGTGTGTTGGGGAGGGCGGTTTCTCCGTGGTGTGGAA
GGTGCGGGCGCGGGGCACGGGTCGGATGTCGGCGGTGAAGCGCAGCAAGC
GGGAGTTCCGCAGCGTGCGGGAGAGGGACCGCGCGCTGCAGGAGGCACGG
ACGCTGCAGTGCCTGGGGGGGCACCCCTCGGTGCTGCGGTTCGAGCGGGC
GTGGCAGGAGGACGGCCACTTCTGCCTGCAGACGGAGCTGTGCGAGCTGG
GCAGCCTCAAGGACTTCATGGAGCGGTTTGTGCACCTGGGGTGTGTTGGG
GAGGGCGGTTTCTCCGTGGTGTGGAAGGTGCGGGCGCGGGGCACGGGTCG
GATGTCGGCGGTGAAGCGCAGCAAGCGGGAGTTCCGCAGCGTGCGGGAGA
GGGACCGCGCGCTGCAGGAGGCACGGACGCTGCAGTGCCTGGGGGGGCAC
CCCTCGGTGCTGCGGTTCGAGCGGGCGTGGCAGGAGGACGGCCACTTCTG
CCTGCAGACGGAGCTGTGCGAGCTGGGCAGCCTCAAGGACTTCATGGAGC
GGCTGCCGGTGGGAGTGGTGATCCCTGAGCGGGCGCTGTGGCAGGTGCTG
CACGACGTGGGGGAGGGCCTGCGCCACATCCACGGGCGGGCCCTGGTGCA
CCTGGACGTCAAGCCATCCAACGTGCTCATCGCAGAGGACGCTGCCGGTG
GGAGTGGTGATCCCTGAGCGGGCGCTGTGGCAGGTGCTGCACGACGTGGG
GGAGGGCCTGCGCCACATCCACGGGCGGGCCCTGGTGCACCTGGACGTCA
AGCCATCCAACGTGCTCATCGCAGAGGACGGACGCCTCAAGATTGCCGAC
TTTGGCATGGCCACAGTCTACGGCACGGATGTGGGGGACGGGCAGGAGGG
GGACACACGCTACCTGGCCCGGGAGCTCCTCTCCTCCACGGAACGCCTCC
CATCTGCTGACATATTCAGGACGCCTCAAGATTGCCGACTTTGGCATGGC
CACAGTCTACGGCACGGATGTGGGGGACGGGCAGGAGGGGGACACACGCT
ACCTGGCCCGGGAGCTCCTCTCCTCCACGGAACGCCTCCCATCTGCTGAC
ATATTCAGCCTCGGACTGACGCTCTTTGAGATGGCGGCGAGGGTGCGGCT
GCCAGGCGAGGGGGACACATGGCATCAGCTCAGGGAGGGCCGCTCAGGGT
TGCTGCCGGAGGGACGCTACTCCACGCAGCTGGGCGATGTGGTGGCACAG
CCTCGGACTGACGCTCTTTGAGATGGCGGCGAGGGTGCGGCTGCCAGGCG
AGGGGGACACATGGCATCAGCTCAGGGAGGGCCGCTCAGGGTTGCTGCCG
GAGGGACGCTACTCCACGCAGCTGGGCGATGTGGTGGCACAGATGATGCA
CCCAGACCCTGGCCAGCGCCCCACAGCGGAGGACCTGTGCGCCCACCCGC
GTGTGGCCGAGGTGGCTGCAACCTCCGCTGTGCCCTTGTCTGTGGCGGCT
GCGGCGGGGATGATGCACCCAGACCCTGGCCAGCGCCCCACAGCGGAGGA
CCTGTGCGCCCACCCGCGTGTGGCCGAGGTGGCTGCAACCTCCGCTGTGC
CCTTGTCTGTGGCGGCTGCGGCGGGG
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