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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 715 |
| Cds size | 450 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817265.2640297-UTR-S-ischiensis_contig8:274358..274460 | 1622817265.2640297-UTR-S-ischiensis_contig8:274358..274460 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 274359..274460 + |
| 1695740980.2563748-UTR-S-ischiensis_contig8:274358..274460 | 1695740980.2563748-UTR-S-ischiensis_contig8:274358..274460 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 274359..274460 + |
| 1622817265.2859688-UTR-S-ischiensis_contig8:274910..275010 | 1622817265.2859688-UTR-S-ischiensis_contig8:274910..275010 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 274911..275010 + |
| 1695740980.2791007-UTR-S-ischiensis_contig8:274910..275010 | 1695740980.2791007-UTR-S-ischiensis_contig8:274910..275010 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 274911..275010 + |
| 1622817265.2971184-UTR-S-ischiensis_contig8:276936..276999 | 1622817265.2971184-UTR-S-ischiensis_contig8:276936..276999 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 276937..276999 + |
| 1695740980.289369-UTR-S-ischiensis_contig8:276936..276999 | 1695740980.289369-UTR-S-ischiensis_contig8:276936..276999 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 276937..276999 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817265.275091-CDS-S-ischiensis_contig8:274460..274910 | 1622817265.275091-CDS-S-ischiensis_contig8:274460..274910 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 274461..274910 + |
| 1695740980.269547-CDS-S-ischiensis_contig8:274460..274910 | 1695740980.269547-CDS-S-ischiensis_contig8:274460..274910 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 274461..274910 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19268.1 >prot_S-ischiensis_contig8.19268.1 ID=prot_S-ischiensis_contig8.19268.1|Name=mRNA_S-ischiensis_contig8.19268.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=150bp
MPNSRPLQEICVEHVPIAGLLLRLRQLRVHRAQTQRRPLPLTLAARVTVT
HTRHRCQRCLRRRRSAATLNLKLLGTIMVWTQTRLRATTWMVSLNLKVLG
TIMVWTQTRLRAIPQAARAAVSQARAPVAITQPQPGPGLRCPAWRTGAR* back to topmRNA from alignment at S-ischiensis_contig8:274359..276999+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19268.1 ID=mRNA_S-ischiensis_contig8.19268.1|Name=mRNA_S-ischiensis_contig8.19268.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2641bp|location=Sequence derived from alignment at S-ischiensis_contig8:274359..276999+ (Schizocladia ischiensis KU_0333)
CAGCTTTCCTCAATCCCCTGTCAATTACAGAAGCTGACGTTCAATGTCAT
GCTCCTCCGTCTTTAGTGTGCCCCACACCGGCTCTAGCCTGAGCACCTGT
TCATGCCAAACTCTCGACCACTACAGGAAATCTGCGTAGAGCATGTCCCC
ATCGCTGGCCTCCTGCTGAGACTGCGCCAGCTCCGCGTCCACCGCGCTCA
GACTCAGCGCCGGCCCTTGCCCCTCACTCTGGCTGCCCGCGTCACCGTCA
CCCACACCCGCCACCGCTGCCAGCGCTGCCTCAGGAGAAGACGCTCTGCG
GCCACCTTGAACCTGAAACTGCTGGGCACGATCATGGTTTGGACTCAAAC
ACGCCTCCGAGCTACCACCTGGATGGTGTCCCTGAACTTGAAAGTGCTGG
GCACAATCATGGTTTGGACTCAAACACGCCTCCGAGCTATACCTCAGGCT
GCCCGGGCCGCCGTTTCTCAGGCTCGGGCCCCCGTGGCCATCACCCAGCC
GCAGCCCGGGCCCGGCCTGAGGTGCCCAGCCTGGCGCACAGGGGCCCGCT
GACCTGGAGCCTGAGCCCGTCATGCAGCCCCCCCCGGCCGAGGGACGGAA
GCCGCCGCCAGCCCAGGCCGCAGACGCGTGGCACGTGCCGCTGCCAGTGG
CCGCGCCGCCGCCCCGCCGCCGCCGCCGCCGCCCCGCCGCCGCCCGCGCC
GCCGCGCCGCCGCTGTGGCTGCCATGGCGCGGGCCGCTGCCGCCACCGTT
TCGGCTCCATGCCAGGTGCCTGCTGTGGCCGGGCCCAACAGGAGTCCCGG
GGGGGCTTGGGGTGCGACGGCCCGGGGGCGAGGCGCACGTGGCCGCGAGG
CTAGGCGGTTGCCCAGACACCAGTGGCAGGGCCACCTCAGGCTGCCCTGG
GGCTGCTGCCGGGGACAGTGGCAGCGCGGAGACTGGGGCAGCGGGGGTGC
CGGGCCCAGCGGGGGCGTGCACCAGTGGATGCGGAGGCGTGACCTCAGGA
TCTCGAAGACTTGCCGCCGCAGCCGCAGCCACGGCCGTCACAGCGGCCTT
GTTACGCGGGGCGTCCGCGCCGGCGGCCTGAGGGCCCACCGGCAGCAACG
TTCCCGGACCCCTGAGTCCCCCCCCGGGCCCGCCCCCGCGTCCCGGTGCT
GCTGCTGCTGCCGCTCCTTCTGCAGCTGCAGCGGTCACTGGCATGGCAGG
GTCGGCAGGGCCAGCTACCTCCTCCCCCACCCGCTCCTCCCCCTCCTCCT
CTTGTTTTACATGACCATGCCCCCCCGCCCTCCATGGCACCGTGACGCCC
TGGTCCCGGCCCTGGTCCTGGCCCTGGCCCTGGTCCTGCCCCGGCGCCTG
GCGCCCGGCCTGGCCCGCAGATGGACCCGGGGGGGGGCTGACCCCCGCTG
TCTGCGTCTGCGGCCCCTTGGCCTGCTCGCTCGCACGTGCCGCGGCACGG
GCAGCAGAGCTTGCTTTGCGTGTCTGGACGTACCCGGGTGCTTCGAGGAA
GAGCTGGCGGAGTAGCATACGCCAGTCGAGGGCGGAGGGGTGTACGTGCG
TGTGTGTGCGGGGGGTAGTTGATGGGTTAGGTTTGCTCACTGGGGGGCGC
TTGGTAGACACCACGGCTGGCTCTTGCTTGGGAAGAAAACCGTCTTTGCA
ACTGGGAAATGTACTCGGAAGTACTGCGCATTGCTCACTGCTTGGAAGTA
CTTGTGCAAGCGCAAGTGTTTCACTGCAAAGAGCGTACAATGACCGTACC
GTACTGTCCTACCACATCCCCTCCAACCCACACCACCACATTCCTTCTCC
ACCGTCCCTCCCTTGCCTCCCCCATCCCTTGGACCCACCTTGTCCAACAC
AACCATCATATCCCCCAGCGTGCGGTAGCTCTTCACGTGGCTGCGTATCC
AGCACGCGAGATGCCCCGTGTGTTTCCCAGAGGCGTGCCTCTCGTCCACA
AGGATTATGGCCCCGTAGTCAAACATGTGCCGGATGCAGCGCCCGAGCGC
CTGCGGTCGGGAGGGCGGGGGGGGGGGGCTCACGGTTCTGGTCCATTCAA
TACGCCGTGGTTCGAAACATGCTTGGTGGCACATCAGACCTATGTAAAGT
CCTAGCAAAGTGCTTGCTCGCGAACTTCAAAGCATGTACTTCCGGAAGTA
CTTCGAAGTACTTGCACAACACCCACGTCTGTGAAAGGATATTCCCCGTC
CCGGGGCCTGCCAGGGGACGGGCCCAGTGCAAGGAAGCAATCGCAGGAGC
AGCCAGGGGTGCTCTGCAGTGCAATACAGTAAGTACACTACACTACAGTA
CAGTGCGGTACAACACAGTACACTACACTGCAGTGCAGTACAGCACAGTA
CACTACAGTACACTACACTACAGTAGTGCAGTACAGTACAGTGCAATACA
GTACAGGATCCGAAATTAATCTGCACTCCACACAGTACTGTAGTCTACCT
GGTTGAGCGCCCGAAAGGCCTGCTGCTCGTACCACTCATCCCCGGTAAGC
AGCGCCACGCCGCCCAAACCGGCGCTCCCCCGCACGATTCCTCCTGTGGC
CGTGTTCTCGTCCCCCCCCCGGGCGGCGGCGGCGGCCGCCGCGGCAGCCT
TGAGCTGCTCTTTCCGCATGTGATTGTTGTATTTCCTTTTC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:274359..276999+ >mRNA_S-ischiensis_contig8.19268.1 ID=mRNA_S-ischiensis_contig8.19268.1|Name=mRNA_S-ischiensis_contig8.19268.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=900bp|location=Sequence derived from alignment at S-ischiensis_contig8:274359..276999+ (Schizocladia ischiensis KU_0333)
ATGCCAAACTCTCGACCACTACAGGAAATCTGCGTAGAGCATGTCCCCAT
CGCTGGCCTCCTGCTGAGACTGCGCCAGCTCCGCGTCCACCGCGCTCAGA
CTCAGCGCCGGCCCTTGCCCCTCACTCTGGCTGCCCGCGTCACCGTCACC
CACACCCGCCACCGCTGCCAGCGCTGCCTCAGGAGAAGACGCTCTGCGGC
CACCTTGAACCTGAAACTGCTGGGCACGATCATGGTTTGGACTCAAACAC
GCCTCCGAGCTACCACCTGGATGGTGTCCCTGAACTTGAAAGTGCTGGGC
ACAATCATGGTTTGGACTCAAACACGCCTCCGAGCTATACCTCAGGCTGC
CCGGGCCGCCGTTTCTCAGGCTCGGGCCCCCGTGGCCATCACCCAGCCGC
AGCCCGGGCCCGGCCTGAGGTGCCCAGCCTGGCGCACAGGGGCCCGCTGA
ATGCCAAACTCTCGACCACTACAGGAAATCTGCGTAGAGCATGTCCCCAT
CGCTGGCCTCCTGCTGAGACTGCGCCAGCTCCGCGTCCACCGCGCTCAGA
CTCAGCGCCGGCCCTTGCCCCTCACTCTGGCTGCCCGCGTCACCGTCACC
CACACCCGCCACCGCTGCCAGCGCTGCCTCAGGAGAAGACGCTCTGCGGC
CACCTTGAACCTGAAACTGCTGGGCACGATCATGGTTTGGACTCAAACAC
GCCTCCGAGCTACCACCTGGATGGTGTCCCTGAACTTGAAAGTGCTGGGC
ACAATCATGGTTTGGACTCAAACACGCCTCCGAGCTATACCTCAGGCTGC
CCGGGCCGCCGTTTCTCAGGCTCGGGCCCCCGTGGCCATCACCCAGCCGC
AGCCCGGGCCCGGCCTGAGGTGCCCAGCCTGGCGCACAGGGGCCCGCTGA back to top
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