mRNA_S-ischiensis_contig76.18950.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig76.18950.1 vs. uniprot
Match: Q2NPG0_9CAUD (HNH endonuclease family protein n=1 Tax=Xanthomonas virus OP1 TaxID=329254 RepID=Q2NPG0_9CAUD) HSP 1 Score: 72.0 bits (175), Expect = 3.690e-13 Identity = 39/84 (46.43%), Postives = 53/84 (63.10%), Query Frame = 1
Query: 1 LHHRDGNKANNSTRNLEFVSQVANCRKREGRQSNNTSGVNGVHWHKDKRKWQADVPVDGRRKHLGLFVVKSDAKKARCAAEKKY 252
L H DG K NN NL S N + R G+ SNNTSGV GV+WHK+ +KW+A + +DG++ LGLF +A AR AA+ ++
Sbjct: 76 LDHIDGCKTNNRISNLRECSNAENQQNR-GKSSNNTSGVPGVYWHKEAKKWRARIMLDGKQISLGLFNTLEEAAAAREAAKAQH 158
BLAST of mRNA_S-ischiensis_contig76.18950.1 vs. uniprot
Match: Q7Y5F9_9CAUD (57R n=1 Tax=Xanthomonas virus Xp10 TaxID=232237 RepID=Q7Y5F9_9CAUD) HSP 1 Score: 71.6 bits (174), Expect = 5.190e-13 Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 1
Query: 1 LHHRDGNKANNSTRNLEFVSQVANCRKREGRQSNNTSGVNGVHWHKDKRKWQADVPVDGRRKHLGLFVVKSDAKKARCAAEKKY 252
L H +G K +N NL + N + R G+ SNNTSGV GV WHK ++KW+A + V+G+ HLG F +A AR AA++KY
Sbjct: 76 LDHINGIKTDNRIVNLRECTDAENKQNR-GKSSNNTSGVPGVGWHKQRKKWRAQIKVNGKNIHLGWFDTIEEAAAARAAAKEKY 158
BLAST of mRNA_S-ischiensis_contig76.18950.1 vs. uniprot
Match: A5H1K2_9CAUD (p31.1 n=1 Tax=Xanthomonas virus Xop411 TaxID=470314 RepID=A5H1K2_9CAUD) HSP 1 Score: 66.6 bits (161), Expect = 3.760e-11 Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 1 LHHRDGNKANNSTRNLEFVSQVANCRKREGRQSNNTSGVNGVHWHKDKRKWQADVPVDGRRKHLGLFVVKSDAKKARCAAEKKY 252
+ H +G K +N NL S N ++ G++S+NTSGV GV WHK KW+A + V+G++ +LGLF ++A AR AA+++Y
Sbjct: 67 IDHINGQKDDNRIDNLRECSNAEN-QQNAGKRSDNTSGVQGVGWHKQAGKWRARIKVNGKQINLGLFHTLAEAAAARAAAKQQY 149
BLAST of mRNA_S-ischiensis_contig76.18950.1 vs. uniprot
Match: A0A8G1I690_9CAUD (Homing endonuclease n=1 Tax=Klebsiella phage vB_KpnS_MK54 TaxID=2783667 RepID=A0A8G1I690_9CAUD) HSP 1 Score: 66.2 bits (160), Expect = 6.530e-11 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 1 LHHRDGNKANNSTRNLEFVSQVANCRKREGRQSNNTSGVNGVHWHKDKRKWQADVPVDGRRKHLGLFVVKSDAKKARCAAEKKY 252
+ H + N +N NL ++ N K + + S+N+SGV GVHW KDKRKWQA + V+ + HLG F DA+ AR AE++Y
Sbjct: 81 IDHINHNPGDNRIENLRLTNRGGNL-KNKSKYSSNSSGVTGVHWRKDKRKWQAKIRVNKKFIHLGYFNDILDAELARKKAEEEY 163
BLAST of mRNA_S-ischiensis_contig76.18950.1 vs. uniprot
Match: UPI000D59E02B (HNH endonuclease n=1 Tax=Morganella morganii TaxID=582 RepID=UPI000D59E02B) HSP 1 Score: 64.7 bits (156), Expect = 2.260e-10 Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 1
Query: 1 LHHRDGNKANNSTRNLEFVSQVANCRKREGRQSNNTSGVNGVHWHKDKRKWQADVPVDGRRKHLGLFVVKSDAKKARCAAEKK 249
+ H +GNK++N NL + N R R+ ++N TSGV GV+W ++K+KW+A + DG+ K+LG F S A +A C A ++
Sbjct: 75 IDHINGNKSDNRISNLRLATHQENMRNRKMPKTN-TSGVKGVYWDREKKKWRAGLRFDGKSKNLGYFTDLSVAARAVCKAREE 156
BLAST of mRNA_S-ischiensis_contig76.18950.1 vs. uniprot
Match: Q7Y5G7_9CAUD (49L n=1 Tax=Xanthomonas virus Xp10 TaxID=232237 RepID=Q7Y5G7_9CAUD) HSP 1 Score: 63.5 bits (153), Expect = 7.320e-10 Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 1
Query: 1 LHHRDGNKANNSTRNLEFVSQVANCRKREGRQSNNTSGVNGVHWHKDKRKWQADVPVDGRRKHLGLFVVKSDAKKARCAAEKKY 252
L H G + +N NL ++ N + R G SNNTSGV GV WHK +KW+A + V G+ LG F +A AR AA+++Y
Sbjct: 78 LDHISGQRDDNRFSNLRECNKSENGQNR-GMSSNNTSGVQGVCWHKQTKKWRARIMVQGKHISLGYFTTIEEAAAARAAAKQQY 160
BLAST of mRNA_S-ischiensis_contig76.18950.1 vs. uniprot
Match: A0A2A3B879_9HYPH (Uncharacterized protein n=1 Tax=Mesorhizobium sp. WSM3866 TaxID=422271 RepID=A0A2A3B879_9HYPH) HSP 1 Score: 63.2 bits (152), Expect = 1.160e-9 Identity = 33/87 (37.93%), Postives = 49/87 (56.32%), Query Frame = 1
Query: 1 LHHRDGNKANNSTRNLEFVSQVANCR---KREGRQSNNTSGVNGVHWHKDKRKWQADVPVDGRRKHLGLFVVKSDAKKARCAAEKKY 252
+ H +G+ +N NL VS + NCR +R + SGVNGV+WHK RKW A + ++G+ +LG + +A + R AEK Y
Sbjct: 79 IDHINGDGKDNRIENLRLVSHLENCRNLGRRLPKNPERDSGVNGVYWHKQSRKWMARIKINGKWIYLGTYSHLDEAVRIRKDAEKAY 165
BLAST of mRNA_S-ischiensis_contig76.18950.1 vs. uniprot
Match: UPI001573DCA1 (HNH endonuclease n=1 Tax=Agrobacterium rhizogenes TaxID=359 RepID=UPI001573DCA1) HSP 1 Score: 62.0 bits (149), Expect = 3.160e-9 Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = 1
Query: 1 LHHRDGNKANNSTRNLEFVSQVANCRKREGRQSNNTSGVNGVHWHKDKRKWQADVPVDGRRKHLGLFVVKSDAKKARCAAEKKY 252
+ H + N+++N NL ++ N SNNTSG+ GVHW D KW+A + V G KHLG F A AR AA+++Y
Sbjct: 89 IDHLNHNRSDNRWENLREADRITNGHNMS-LNSNNTSGITGVHWRADAGKWRARIQVSGSWKHLGYFDTIEAAAAARKAADREY 171
BLAST of mRNA_S-ischiensis_contig76.18950.1 vs. uniprot
Match: UPI001BCDC1EA (HNH endonuclease n=3 Tax=Enterobacter TaxID=547 RepID=UPI001BCDC1EA) HSP 1 Score: 62.0 bits (149), Expect = 3.480e-9 Identity = 36/87 (41.38%), Postives = 47/87 (54.02%), Query Frame = 1
Query: 1 LHHRDGNKANNSTRNLEFVSQVANCRKR---EGRQSNNTSGVNGVHWHKDKRKWQADVPVDGRRKHLGLFVVKSDAKKARCAAEKKY 252
+ H DGN+ANNS RNL V++ N R G N +G +GV WHK KW A + + +LG+F DA AR AAE K+
Sbjct: 92 IDHIDGNRANNSIRNLREVTREQNHMNRALINGPSRTNKTGCHGVTWHKKSGKWMAKIIYQNKSHYLGIFDDVEDAISARKAAEIKF 178
BLAST of mRNA_S-ischiensis_contig76.18950.1 vs. uniprot
Match: R9TPQ7_9CAUD (HNH endonuclease n=3 Tax=Siphoviridae TaxID=10699 RepID=R9TPQ7_9CAUD) HSP 1 Score: 61.2 bits (147), Expect = 3.780e-9 Identity = 36/84 (42.86%), Postives = 47/84 (55.95%), Query Frame = 1
Query: 1 LHHRDGNKANNSTRNLEFVSQVANCRKREGRQSNNTSGVNGVHWHKDKRKWQADVPVDGRRKHLGLFVVKSDAKKARCAAEKKY 252
+ H D NK NN NL V+ N + R +N SGV GV W K +KW +++ VDG + HLGLF + A +AR AE KY
Sbjct: 63 IDHIDHNKTNNKIDNLRLVTPKENNHNMKFRVTNK-SGVTGVSWDKQHKKWASNIKVDGVKIHLGLFSDLNMAAEARRKAEVKY 145 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig76.18950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig76.18950.1 >prot_S-ischiensis_contig76.18950.1 ID=prot_S-ischiensis_contig76.18950.1|Name=mRNA_S-ischiensis_contig76.18950.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=87bp LHHRDGNKANNSTRNLEFVSQVANCRKREGRQSNNTSGVNGVHWHKDKRKback to top mRNA from alignment at S-ischiensis_contig76:539496..539902+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig76.18950.1 ID=mRNA_S-ischiensis_contig76.18950.1|Name=mRNA_S-ischiensis_contig76.18950.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=407bp|location=Sequence derived from alignment at S-ischiensis_contig76:539496..539902+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig76:539496..539902+ >mRNA_S-ischiensis_contig76.18950.1 ID=mRNA_S-ischiensis_contig76.18950.1|Name=mRNA_S-ischiensis_contig76.18950.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=522bp|location=Sequence derived from alignment at S-ischiensis_contig76:539496..539902+ (Schizocladia ischiensis KU_0333)back to top |