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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 342 |
| Cds size | 339 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817199.5565941-CDS-S-ischiensis_contig73:564682..564767 | 1622817199.5565941-CDS-S-ischiensis_contig73:564682..564767 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig73 564683..564767 - |
| 1695740930.4056377-CDS-S-ischiensis_contig73:564682..564767 | 1695740930.4056377-CDS-S-ischiensis_contig73:564682..564767 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig73 564683..564767 - |
| 1622817199.5700336-CDS-S-ischiensis_contig73:565595..565720 | 1622817199.5700336-CDS-S-ischiensis_contig73:565595..565720 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig73 565596..565720 - |
| 1695740930.415722-CDS-S-ischiensis_contig73:565595..565720 | 1695740930.415722-CDS-S-ischiensis_contig73:565595..565720 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig73 565596..565720 - |
| 1622817199.5818374-CDS-S-ischiensis_contig73:566735..566864 | 1622817199.5818374-CDS-S-ischiensis_contig73:566735..566864 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig73 566736..566864 - |
| 1695740930.4304981-CDS-S-ischiensis_contig73:566735..566864 | 1695740930.4304981-CDS-S-ischiensis_contig73:566735..566864 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig73 566736..566864 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig73.18682.1 >prot_S-ischiensis_contig73.18682.1 ID=prot_S-ischiensis_contig73.18682.1|Name=mRNA_S-ischiensis_contig73.18682.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=113bp
ALSGRSGGGSPASTDGVSTGAGEAELPGTVEACVGLALEALLKACEASEK
ELSKEREKAKEREREKEDTLTETNVEIAVATDDGRIRTCAPGEVREHLRL
LESQGGRGGGGGG back to topmRNA from alignment at S-ischiensis_contig73:564682..566864- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig73.18682.1 ID=mRNA_S-ischiensis_contig73.18682.1|Name=mRNA_S-ischiensis_contig73.18682.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2183bp|location=Sequence derived from alignment at S-ischiensis_contig73:564682..566864- (Schizocladia ischiensis KU_0333)
GCGCTGTCTGGACGGTCGGGAGGGGGCAGCCCCGCCTCTACCGATGGGGT
TTCGACGGGAGCGGGGGAGGCAGAGCTTCCTGGGACGGTGGAGGCGTGTG
TGGGGCTGGCCCTGGAGGCGCTGCTGAAGGTGGGGAAGGCTTTGGGCCCG
GCTGGGGTGGTGAGGGAAGGGAGCAACTCTGGTAGCTACTGTAGTAAGAC
TATTCGGTTGTACAGTAGTGAGTTTCACTTGATAAGGACCCTACTGTACT
TGACGTATACCTTTATACTGGTACTTCGATGTATTGCCGTACTACGTAGT
ATAGTTGGAACTGCTCGGAAGCATATGTATGACAGGCGTGATCAGCCGTC
TCCGGGCTATGCGCGGCAAGCACGTATGTCAAGCTTGGAAGTACTTGGGT
GTAGTGCATGATTCCAAGTACACACACGTACCTACATCCAGCACAGGTTG
CCACAAGCGCAAGTACTGCGTCCCGAGACCACTGACCACACATGCGCCTT
GAACGAGACGGAGCAGACCCCCTCCCGTCCCTGGCAGAGCCAGAAAATGT
CGGGACAACAGCCACGGCGTGGATTTTCGTATCTTCTAGAGATACTTCGA
CACATTCCCCGTGAAATACACGGGATTTTTCGAACAAGGTACTTGCTACC
TTCGTTCCACCGTGTGCCAGTGATGGAATATCGATCAGCAGATAGTTATC
GGGCTCGACTGATTTTGTGGGTGGCGCTACTATCTGGTTGAATTTAGTGT
GGGTCAAACTATCAAATATCGACTATTGATAGACATATAGCTGCACGCTC
CTACAGGTATGTCCCGCAACGTGGCACCCTTAACACTAACCCCCCTACAT
TGCCCCTGTAGCGCCCGTGCATCGCCCCCCTTAGTGGCTTCTTTTCTTGA
TTTTTAGGCCCTGCGGGTGAAAAGGGCTTCTGCTGAGGTCCCCACCTTAG
GTTGTTGGGACGGGGCCCGGAACTCGCATGCCATCAAAATAATTTCAAAT
CAGTACTGTCGATGAATAGGTTGATTTGCTTAGATATTCCATCGCTGCCG
TGTGCACGCGTAGGTCTCAAAGATCGGTGCCGCTCAGGGGTCGCCCGCCC
TCCCGTCCCGGCCCTGTATGTTCGCCCCCGCCTCGCCGCTGCAGGCCTGC
GAGGCATCTGAGAAGGAGCTGTCAAAGGAGAGGGAGAAGGCCAAGGAGAG
GGAGAGGGAGAAGGAGGACACCCTCACCGAGACCAATGTGGAGATTGCCG
TGGCCACGGATGACGGCAGGTGTGGGCGCACAGACAAACTGTGCTTCCAA
AGTACGAGTACGAGTACTCACACTTCCGTACCCCACTTCCGGGAGTACTG
AGTACTGTACTCGTAGTCGACTATACCTAGTATATATATATATGTACTCA
CGTGGTGCTTGCCGTAGTCCCCAGACCATTGACCCCGCGCCTCGTTCGAG
ATGGAGCCTAGTACTTTGAAGTATTTCAGAAGTAATTTGAAGTGGTTGGG
ATAATGCCGCATTGGACATACTCGGCGTCTATAAACATACATTATAGTGC
ACTAAGCTTACTTGGTACTGTTCCATGAAACGCACGTCCTTGGAAGCACT
CGTATGCGCTTCCAAGCACACAGTACACGAAACCATGTTCGATGTTCTAT
ACACGAGGCATGTCCGTTCCGATATATATATATATACTCGTATATATACA
TACTCCAAGTATTCCTGAGAAGTGCTCTTGTATACTTGGTAGTCCCGAGA
CCATTGCTCTCGTGAGGAGAGACAAGATTGGGGTGGAAGATAGTGGAAAA
TAGAGGTGTCTCTACTTACTTGTGCAAGTTCCGGGCCCCAACACAGAAGC
CCTTCCTTCACTCGGCTTCACTCGCAGGGCAACAAATAGAAGAGCAAACC
AAGCTGATGTAATGGATCGGCTTCTTTGATATGATGTGATGTGCCTTCAC
CCGCATTCACTCGCAGGGCACCACAATGCACGATGCGCGAAAGTGCTGTA
CAGCAAGTGCTTGATTTTACTTGTCCGTTCAGGGGCCCGCATAACGGTGC
ATGAGTGTGCGTGCACACCCCTCTCCTGCCCCCCCCCCCATTGGCAGGAT
CCGTACCTGCGCACCCGGGGAAGTGAGGGAGCACCTACGTCTGCTTGAGT
CCCAGGGTGGCAGAGGCGGCGGCGGAGGGGGAG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig73:564682..566864- >mRNA_S-ischiensis_contig73.18682.1 ID=mRNA_S-ischiensis_contig73.18682.1|Name=mRNA_S-ischiensis_contig73.18682.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=678bp|location=Sequence derived from alignment at S-ischiensis_contig73:564682..566864- (Schizocladia ischiensis KU_0333)
GCGCTGTCTGGACGGTCGGGAGGGGGCAGCCCCGCCTCTACCGATGGGGT
TTCGACGGGAGCGGGGGAGGCAGAGCTTCCTGGGACGGTGGAGGCGTGTG
TGGGGCTGGCCCTGGAGGCGCTGCTGAAGGCGCTGTCTGGACGGTCGGGA
GGGGGCAGCCCCGCCTCTACCGATGGGGTTTCGACGGGAGCGGGGGAGGC
AGAGCTTCCTGGGACGGTGGAGGCGTGTGTGGGGCTGGCCCTGGAGGCGC
TGCTGAAGGCCTGCGAGGCATCTGAGAAGGAGCTGTCAAAGGAGAGGGAG
AAGGCCAAGGAGAGGGAGAGGGAGAAGGAGGACACCCTCACCGAGACCAA
TGTGGAGATTGCCGTGGCCACGGATGACGGCAGGCCTGCGAGGCATCTGA
GAAGGAGCTGTCAAAGGAGAGGGAGAAGGCCAAGGAGAGGGAGAGGGAGA
AGGAGGACACCCTCACCGAGACCAATGTGGAGATTGCCGTGGCCACGGAT
GACGGCAGGATCCGTACCTGCGCACCCGGGGAAGTGAGGGAGCACCTACG
TCTGCTTGAGTCCCAGGGTGGCAGAGGCGGCGGCGGAGGGGGAGATCCGT
ACCTGCGCACCCGGGGAAGTGAGGGAGCACCTACGTCTGCTTGAGTCCCA
GGGTGGCAGAGGCGGCGGCGGAGGGGGA back to top
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