mRNA_S-ischiensis_contig7.18066.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig7.18066.1
Unique NamemRNA_S-ischiensis_contig7.18066.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig7.18066.1 vs. uniprot
Match: A0A6H5KJB1_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJB1_9PHAE)

HSP 1 Score: 568 bits (1463), Expect = 6.010e-201
Identity = 284/310 (91.61%), Postives = 296/310 (95.48%), Query Frame = 1
Query:    1 MDRFQQLFNLPGMGGQGGGTPDAPVVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNPRAVSVVVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLNRKQWTQGLVMTRFEDHQAANQKTVEAMLKLSKEYNERVQEEEGKTAEELAVMNVGKVDPKRHLETDVVDLMAANIVQSLGAMLDTVIF 930
            M+RFQQLFN+ G G QGGG PD PVVDT+EK+HISSLALLKMLKHGRAGVPMEVMGLMLG FVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLN RAVS+VVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPS+QALIHGL RHYYSIVIDYRKNELEEQMLMNLNR+QWTQGLVM RFEDHQ +N+KTVEAMLKLSKEYNERVQEEEGKT +ELAV+NVGKVDPKRHLE DV +LMAANIVQSLG MLDTVIF
Sbjct:    1 MERFQQLFNMQGRG-QGGGAPDGPVVDTSEKLHISSLALLKMLKHGRAGVPMEVMGLMLGHFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNARAVSIVVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPSVQALIHGLQRHYYSIVIDYRKNELEEQMLMNLNREQWTQGLVMKRFEDHQTSNEKTVEAMLKLSKEYNERVQEEEGKTIDELAVLNVGKVDPKRHLENDVSELMAANIVQSLGVMLDTVIF 309          
BLAST of mRNA_S-ischiensis_contig7.18066.1 vs. uniprot
Match: A0A835ZIK0_9STRA (26S proteasome regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIK0_9STRA)

HSP 1 Score: 543 bits (1398), Expect = 4.610e-191
Identity = 271/310 (87.42%), Postives = 290/310 (93.55%), Query Frame = 1
Query:    1 MDRFQQLFNLPGMGGQGGGTPDAPVVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNPRAVSVVVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLNRKQWTQGLVMTRFEDHQAANQKTVEAMLKLSKEYNERVQEEEGKTAEELAVMNVGKVDPKRHLETDVVDLMAANIVQSLGAMLDTVIF 930
            M+RFQQ+F L  MG QG    D+PVVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYT+NC+DVFAMPQSGTGVSVEAVDPVFQT+ML+MLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFE LN RAV+VVVDPIQSVKGKVVID FRLINPQ MMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNL+RKQWT GLV+ RFEDHQ AN+KT+E ML+LSKEYN RV+EEEGKT EELA+M+VGKVDPKRHLE  V+DLMA+NIVQSLGAMLDTV+F
Sbjct:    1 MERFQQMF-LNSMGSQGAPAQDSPVVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTINCVDVFAMPQSGTGVSVEAVDPVFQTRMLEMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNTRAVAVVVDPIQSVKGKVVIDCFRLINPQSMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLHRKQWTDGLVLKRFEDHQTANEKTIEDMLRLSKEYNVRVEEEEGKTPEELAIMHVGKVDPKRHLEQHVLDLMASNIVQSLGAMLDTVVF 309          
BLAST of mRNA_S-ischiensis_contig7.18066.1 vs. uniprot
Match: K3W4W6_GLOUD (MPN domain-containing protein n=12 Tax=Oomycota TaxID=4762 RepID=K3W4W6_GLOUD)

HSP 1 Score: 529 bits (1363), Expect = 1.040e-185
Identity = 262/311 (84.24%), Postives = 286/311 (91.96%), Query Frame = 1
Query:    1 MDRFQQLF-NLPGMGGQGGGTPDAPVVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNPRAVSVVVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLNRKQWTQGLVMTRFEDHQAANQKTVEAMLKLSKEYNERVQEEEGKTAEELAVMNVGKVDPKRHLETDVVDLMAANIVQSLGAMLDTVIF 930
            MDR Q+LF NLPG+ GQGG + D P+VDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLG+FVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGR EMVVGWYHSHPGFGCWLSGVDINTQQSFE LN RAVS+VVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSN+GHLNKPSIQALIHGLNRHYYSI IDYRKNELEEQMLMNL++  W+ GLV+T+FEDH   N+KTV+AML L+++YN+RVQEEE KT EEL ++NVGK+DPK+HLE DV DLMA N VQ LGAMLDT++F
Sbjct:    1 MDRLQRLFGNLPGLPGQGGPSADGPLVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRAEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNNRAVSIVVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNIGHLNKPSIQALIHGLNRHYYSIAIDYRKNELEEQMLMNLHKNTWSDGLVLTKFEDHAVVNEKTVKAMLSLTEQYNKRVQEEEEKTPEELEILNVGKLDPKKHLEGDVYDLMALNTVQCLGAMLDTIVF 311          
BLAST of mRNA_S-ischiensis_contig7.18066.1 vs. uniprot
Match: H3G9L0_PHYRM (MPN domain-containing protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G9L0_PHYRM)

HSP 1 Score: 526 bits (1356), Expect = 1.200e-184
Identity = 261/311 (83.92%), Postives = 285/311 (91.64%), Query Frame = 1
Query:    1 MDRFQQLF-NLPGMGGQGGGTPDAPVVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNPRAVSVVVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLNRKQWTQGLVMTRFEDHQAANQKTVEAMLKLSKEYNERVQEEEGKTAEELAVMNVGKVDPKRHLETDVVDLMAANIVQSLGAMLDTVIF 930
            MDR Q+LF NLPG+ GQGG   D P+VDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLG+FVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQ KML+MLKQTGR EMVVGWYHSHPGFGCWLSGVDINTQQSFE LNPRAV+VVVDPIQSVKGKVVIDAFRLINPQLMM+GQEPRQTTSN+GHLNKPSIQALIHGLNRHYYSI IDYRKNELEEQMLMNL++K W+ GLV+T+FEDH   N+ TV+AML L+++YN+RVQEEE KT EEL V+NVGK+DPK+HLE DV DLMA N VQ LGAMLDT++F
Sbjct:    1 MDRLQRLFGNLPGLPGQGGPGADGPLVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQMKMLEMLKQTGRAEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVVDPIQSVKGKVVIDAFRLINPQLMMMGQEPRQTTSNIGHLNKPSIQALIHGLNRHYYSIAIDYRKNELEEQMLMNLHKKTWSDGLVLTKFEDHSKENETTVKAMLNLTEQYNKRVQEEEEKTPEELEVLNVGKLDPKKHLENDVYDLMALNTVQCLGAMLDTIVF 311          
BLAST of mRNA_S-ischiensis_contig7.18066.1 vs. uniprot
Match: W7TNI5_9STRA (26s proteasome non-atpase regulatory subunit 14 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNI5_9STRA)

HSP 1 Score: 517 bits (1332), Expect = 4.980e-181
Identity = 261/314 (83.12%), Postives = 283/314 (90.13%), Query Frame = 1
Query:    1 MDRFQQLF-NLPGMGGQGGG---TPDAPVVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNPRAVSVVVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLNRKQWTQGLVMTRFEDHQAANQKTVEAMLKLSKEYNERVQEEEGKTAEELAVMNVGKVDPKRHLETDVVDLMAANIVQSLGAMLDTVIF 930
            M R Q LF NL     QGGG   TPD PVVD++EKVHISSLALLKMLKHGRAGVPMEVMGLMLG FVDDYTVNCIDVFAMPQSGT V+VEAVDPVFQ KML+MLKQTGRPEMVVGWYHSHPGFGCWLSGVD+NTQQSFEQLN RAV+VV+DPIQSVKGKVVIDAFR INPQLM+L QEPRQTTSN+GHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNL++K WT GL M RFEDH  AN+ T+EAMLKLSK+YNERV+EEEGKTAE+L V NVGK+DPKRHL++DV  LMA+NIVQ LGAMLDT++F
Sbjct:    1 MHRLQDLFRNL-----QGGGQVPTPDGPVVDSSEKVHISSLALLKMLKHGRAGVPMEVMGLMLGNFVDDYTVNCIDVFAMPQSGTSVTVEAVDPVFQHKMLEMLKQTGRPEMVVGWYHSHPGFGCWLSGVDVNTQQSFEQLNQRAVAVVIDPIQSVKGKVVIDAFRTINPQLMLLNQEPRQTTSNIGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLHKKSWTHGLNMQRFEDHHRANETTIEAMLKLSKDYNERVKEEEGKTAEQLLVGNVGKIDPKRHLDSDVATLMASNIVQCLGAMLDTIVF 309          
BLAST of mRNA_S-ischiensis_contig7.18066.1 vs. uniprot
Match: A0A7S1FXH8_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FXH8_9STRA)

HSP 1 Score: 514 bits (1324), Expect = 7.600e-180
Identity = 253/311 (81.35%), Postives = 280/311 (90.03%), Query Frame = 1
Query:    1 MDRFQQLFN-LPGMGGQGGGTPDAPVVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNPRAVSVVVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLNRKQWTQGLVMTRFEDHQAANQKTVEAMLKLSKEYNERVQEEEGKTAEELAVMNVGKVDPKRHLETDVVDLMAANIVQSLGAMLDTVIF 930
            MDR QQL   +PG    GG  PDAP+ D +EKVH+SSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYT+NC+DVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQ SFE LNPRAV++VVDPIQSVKGKVVID FRLINPQLMMLGQEPRQTTSN+GHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNL++  WT+GL++ R+EDHQ  N+  VE MLKL+ EYNERVQ+EEGKTAE++ V NVGK+DPK+HLE+ V +LM+ NI+Q LG MLDTV+F
Sbjct:    1 MDRLQQLMRGMPG----GGVRPDAPIPDCSEKVHVSSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTINCVDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQSSFEALNPRAVALVVDPIQSVKGKVVIDCFRLINPQLMMLGQEPRQTTSNIGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLHKNNWTKGLIVDRYEDHQKQNETIVEKMLKLTVEYNERVQQEEGKTAEQIIVDNVGKIDPKKHLESSVSELMSTNIIQCLGTMLDTVVF 307          
BLAST of mRNA_S-ischiensis_contig7.18066.1 vs. uniprot
Match: A0A0P1AJS0_PLAHL (26s proteasome non-atpase regulatory subunit 14 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJS0_PLAHL)

HSP 1 Score: 522 bits (1345), Expect = 6.240e-178
Identity = 258/311 (82.96%), Postives = 284/311 (91.32%), Query Frame = 1
Query:    1 MDRFQQLF-NLPGMGGQGGGTPDAPVVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNPRAVSVVVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLNRKQWTQGLVMTRFEDHQAANQKTVEAMLKLSKEYNERVQEEEGKTAEELAVMNVGKVDPKRHLETDVVDLMAANIVQSLGAMLDTVIF 930
            MDR Q+LF NLPG+ GQGG   D P+VDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLG+FVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQ KML+MLKQTGR EMVVGWYHSHPGFGCWLSGVDINTQQSFE LNPRAV+VVVDPIQSVKGKVVIDAFRLINPQLMM+GQEPRQTTSN+GHLNKPSIQALIHGLNRHYYSI IDYRKNELEEQMLMNL++  W+ GLV+T+FEDH   N+KTV++ML L+++YN RVQEEE KT EEL V+NVGK+DPK+HLE DV ++MA N VQ LGAMLDT++F
Sbjct:  336 MDRLQRLFGNLPGLPGQGGPGSDGPLVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQMKMLEMLKQTGRAEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVVDPIQSVKGKVVIDAFRLINPQLMMMGQEPRQTTSNIGHLNKPSIQALIHGLNRHYYSIAIDYRKNELEEQMLMNLHKNTWSDGLVLTKFEDHSKENEKTVKSMLALTEQYNTRVQEEEEKTPEELEVLNVGKLDPKKHLENDVYEIMALNTVQCLGAMLDTIVF 646          
BLAST of mRNA_S-ischiensis_contig7.18066.1 vs. uniprot
Match: A0A3M6VIQ7_9STRA (MPN domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIQ7_9STRA)

HSP 1 Score: 521 bits (1341), Expect = 7.960e-177
Identity = 258/309 (83.50%), Postives = 282/309 (91.26%), Query Frame = 1
Query:    7 RFQQLF-NLPGMGGQGGGTPDAPVVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNPRAVSVVVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLNRKQWTQGLVMTRFEDHQAANQKTVEAMLKLSKEYNERVQEEEGKTAEELAVMNVGKVDPKRHLETDVVDLMAANIVQSLGAMLDTVIF 930
            R Q+LF NLPG+ GQGG   D P+VDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLG+FVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQ KML+MLKQTGR EMVVGWYHSHPGFGCWLSGVDINTQQSFE LNPRAV+VVVDPIQSVKGKVVIDAFRLINPQLMM+GQEPRQTTSN+GHLNKPSIQALIHGLNRHYYSI IDYRKNELEEQMLMNL++K W+ GL++T+FEDH   N+ TVE ML L+++YN+RVQEEE KT EEL V+NVGK+DPK+HLE DV DLMA N VQ LGAMLDT++F
Sbjct:  374 RLQRLFGNLPGLPGQGGPGADGPLVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQMKMLEMLKQTGRAEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVVDPIQSVKGKVVIDAFRLINPQLMMMGQEPRQTTSNIGHLNKPSIQALIHGLNRHYYSIAIDYRKNELEEQMLMNLHKKTWSDGLMLTKFEDHSKENETTVETMLALTEQYNKRVQEEEEKTPEELEVLNVGKLDPKKHLENDVYDLMALNTVQCLGAMLDTIVF 682          
BLAST of mRNA_S-ischiensis_contig7.18066.1 vs. uniprot
Match: A0A7S2WCS9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCS9_9STRA)

HSP 1 Score: 506 bits (1302), Expect = 9.350e-177
Identity = 248/290 (85.52%), Postives = 269/290 (92.76%), Query Frame = 1
Query:   61 PDAPVVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNPRAVSVVVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLNRKQWTQGLVMTRFEDHQAANQKTVEAMLKLSKEYNERVQEEEGKTAEELAVMNVGKVDPKRHLETDVVDLMAANIVQSLGAMLDTVIF 930
            PD PVVDTAEKV ISSLALLKMLKHGRAGVPMEVMGLMLGQFVD+YT+ C+DVFAMPQSGTGVSVEAVDPVFQTKML+MLKQTGRPEMVVGWYHSHPGFGCW+SGVDINTQQSFE LN RAV+VVVDPIQSVKGKVVID FRLINPQ MMLGQEPRQTTSNVGHL KPSIQALIHGLNRHYYS+V+DYRKNELEEQMLMNL++K WT GL   RFEDHQ +N+KT+++M++LSK+YN RVQEEEGKTAEELAV NVGK+DPKRHLE  V DLMAANI+QSLG ML TV+F
Sbjct:    2 PDGPVVDTAEKVQISSLALLKMLKHGRAGVPMEVMGLMLGQFVDEYTITCVDVFAMPQSGTGVSVEAVDPVFQTKMLEMLKQTGRPEMVVGWYHSHPGFGCWMSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDCFRLINPQSMMLGQEPRQTTSNVGHLKKPSIQALIHGLNRHYYSMVLDYRKNELEEQMLMNLHKKAWTDGLTTLRFEDHQTSNEKTLKSMVQLSKDYNTRVQEEEGKTAEELAVANVGKIDPKRHLENSVADLMAANIIQSLGTMLCTVVF 291          
BLAST of mRNA_S-ischiensis_contig7.18066.1 vs. uniprot
Match: A0A1E7FG62_9STRA (Mov34-domain-containing protein n=3 Tax=Bacillariophycidae TaxID=33850 RepID=A0A1E7FG62_9STRA)

HSP 1 Score: 506 bits (1303), Expect = 1.420e-176
Identity = 249/312 (79.81%), Postives = 277/312 (88.78%), Query Frame = 1
Query:    1 MDRFQQLFN-LPGMGGQGGGT-PDAPVVDTAEKVHISSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNPRAVSVVVDPIQSVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLNRKQWTQGLVMTRFEDHQAANQKTVEAMLKLSKEYNERVQEEEGKTAEELAVMNVGKVDPKRHLETDVVDLMAANIVQSLGAMLDTVIF 930
            M+R  QL   +PG GG GGG   D+P  D AEKVH+SSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYT+NC+DVFAMPQSGT VSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLS  DINTQ SFE LN RAV++VVDPIQSVKGKVVID FRLINPQLMMLGQEPRQTTSN+GHL KPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNL+++ WT GL + +FEDHQ +N+K VE MLKL+ +YNERV++EEGKT+E++ V NVGK+DPKRHLET V DLM++NI+Q LG MLDTV+F
Sbjct:    1 MERLHQLMRGMPGGGGLGGGAGSDSPTPDCAEKVHVSSLALLKMLKHGRAGVPMEVMGLMLGQFVDDYTINCVDVFAMPQSGTSVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSSTDINTQSSFEALNSRAVALVVDPIQSVKGKVVIDCFRLINPQLMMLGQEPRQTTSNIGHLQKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLHKRNWTSGLSLEKFEDHQQSNEKVVEKMLKLTTDYNERVKQEEGKTSEQILVDNVGKIDPKRHLETSVTDLMSSNIIQCLGTMLDTVVF 312          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig7.18066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJB1_9PHAE6.010e-20191.61MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZIK0_9STRA4.610e-19187.4226S proteasome regulatory subunit n=1 Tax=Tribonem... [more]
K3W4W6_GLOUD1.040e-18584.24MPN domain-containing protein n=12 Tax=Oomycota Ta... [more]
H3G9L0_PHYRM1.200e-18483.92MPN domain-containing protein n=22 Tax=Peronospora... [more]
W7TNI5_9STRA4.980e-18183.1226s proteasome non-atpase regulatory subunit 14 n=... [more]
A0A7S1FXH8_9STRA7.600e-18081.35Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]
A0A0P1AJS0_PLAHL6.240e-17882.9626s proteasome non-atpase regulatory subunit 14 n=... [more]
A0A3M6VIQ7_9STRA7.960e-17783.50MPN domain-containing protein n=1 Tax=Peronospora ... [more]
A0A7S2WCS9_9STRA9.350e-17785.52Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A1E7FG62_9STRA1.420e-17679.81Mov34-domain-containing protein n=3 Tax=Bacillario... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig7contigS-ischiensis_contig7:1368797..1377736 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score567.0
Seed ortholog evalue5.4e-159
Seed eggNOG ortholog2880.D7FTN9
Preferred namePSMD14
KEGG koko:K03030
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
GOsGO:0000266,GO:0000502,GO:0000724,GO:0000725,GO:0000726,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004175,GO:0004843,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0005838,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006310,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006974,GO:0006996,GO:0007005,GO:0007031,GO:0007088,GO:0007346,GO:0008047,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008237,GO:0008541,GO:0009056,GO:0009057,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010498,GO:0010564,GO:0010604,GO:0010638,GO:0010950,GO:0010952,GO:0010965,GO:0012505,GO:0016043,GO:0016192,GO:0016504,GO:0016559,GO:0016579,GO:0016787,GO:0019222,GO:0019538,GO:0019783,GO:0019941,GO:0022607,GO:0022624,GO:0030071,GO:0030141,GO:0030162,GO:0030163,GO:0030234,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031410,GO:0031597,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032268,GO:0032270,GO:0032436,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033554,GO:0034399,GO:0034515,GO:0034622,GO:0034641,GO:0034774,GO:0036211,GO:0036230,GO:0036459,GO:0042119,GO:0042176,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043248,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045055,GO:0045321,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046483,GO:0046903,GO:0048285,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051603,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0060205,GO:0060255,GO:0061133,GO:0061134,GO:0061135,GO:0061136,GO:0061578,GO:0062033,GO:0065003,GO:0065007,GO:0065009,GO:0070011,GO:0070013,GO:0070536,GO:0070628,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0090068,GO:0090304,GO:0097708,GO:0098772,GO:0099503,GO:0101002,GO:0101005,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1902906,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1904813,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
EggNOG free text desc.metallopeptidase activity
EggNOG OGsCOG1310@1,KOG1555@2759
COG Functional cat.ADK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01002,ko03051,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionJAB1/MPN/MOV34 metalloenzyme domain
Ec32 orthologEc-11_001640.1
Exons5
Model size1428
Cds size933
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig7.18066.1prot_S-ischiensis_contig7.18066.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig7 1369292..1377736 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817157.6288366-UTR-S-ischiensis_contig7:1368796..13692911622817157.6288366-UTR-S-ischiensis_contig7:1368796..1369291Schizocladia ischiensis KU_0333UTRS-ischiensis_contig7 1368797..1369291 -
1695740896.611407-UTR-S-ischiensis_contig7:1368796..13692911695740896.611407-UTR-S-ischiensis_contig7:1368796..1369291Schizocladia ischiensis KU_0333UTRS-ischiensis_contig7 1368797..1369291 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817157.639665-CDS-S-ischiensis_contig7:1369291..13694831622817157.639665-CDS-S-ischiensis_contig7:1369291..1369483Schizocladia ischiensis KU_0333CDSS-ischiensis_contig7 1369292..1369483 -
1695740896.6241288-CDS-S-ischiensis_contig7:1369291..13694831695740896.6241288-CDS-S-ischiensis_contig7:1369291..1369483Schizocladia ischiensis KU_0333CDSS-ischiensis_contig7 1369292..1369483 -
1622817157.6490743-CDS-S-ischiensis_contig7:1370448..13706161622817157.6490743-CDS-S-ischiensis_contig7:1370448..1370616Schizocladia ischiensis KU_0333CDSS-ischiensis_contig7 1370449..1370616 -
1695740896.6379905-CDS-S-ischiensis_contig7:1370448..13706161695740896.6379905-CDS-S-ischiensis_contig7:1370448..1370616Schizocladia ischiensis KU_0333CDSS-ischiensis_contig7 1370449..1370616 -
1622817157.6618948-CDS-S-ischiensis_contig7:1373030..13732821622817157.6618948-CDS-S-ischiensis_contig7:1373030..1373282Schizocladia ischiensis KU_0333CDSS-ischiensis_contig7 1373031..1373282 -
1695740896.6529224-CDS-S-ischiensis_contig7:1373030..13732821695740896.6529224-CDS-S-ischiensis_contig7:1373030..1373282Schizocladia ischiensis KU_0333CDSS-ischiensis_contig7 1373031..1373282 -
1622817157.6723125-CDS-S-ischiensis_contig7:1376182..13763671622817157.6723125-CDS-S-ischiensis_contig7:1376182..1376367Schizocladia ischiensis KU_0333CDSS-ischiensis_contig7 1376183..1376367 -
1695740896.6628373-CDS-S-ischiensis_contig7:1376182..13763671695740896.6628373-CDS-S-ischiensis_contig7:1376182..1376367Schizocladia ischiensis KU_0333CDSS-ischiensis_contig7 1376183..1376367 -
1622817157.6826644-CDS-S-ischiensis_contig7:1377600..13777361622817157.6826644-CDS-S-ischiensis_contig7:1377600..1377736Schizocladia ischiensis KU_0333CDSS-ischiensis_contig7 1377601..1377736 -
1695740896.673236-CDS-S-ischiensis_contig7:1377600..13777361695740896.673236-CDS-S-ischiensis_contig7:1377600..1377736Schizocladia ischiensis KU_0333CDSS-ischiensis_contig7 1377601..1377736 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig7.18066.1

>prot_S-ischiensis_contig7.18066.1 ID=prot_S-ischiensis_contig7.18066.1|Name=mRNA_S-ischiensis_contig7.18066.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=311bp
MDRFQQLFNLPGMGGQGGGTPDAPVVDTAEKVHISSLALLKMLKHGRAGV
PMEVMGLMLGQFVDDYTVNCIDVFAMPQSGTGVSVEAVDPVFQTKMLDML
KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNPRAVSVVVDPIQ
SVKGKVVIDAFRLINPQLMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRH
YYSIVIDYRKNELEEQMLMNLNRKQWTQGLVMTRFEDHQAANQKTVEAML
KLSKEYNERVQEEEGKTAEELAVMNVGKVDPKRHLETDVVDLMAANIVQS
LGAMLDTVIF*
back to top

mRNA from alignment at S-ischiensis_contig7:1368797..1377736-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig7.18066.1 ID=mRNA_S-ischiensis_contig7.18066.1|Name=mRNA_S-ischiensis_contig7.18066.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8940bp|location=Sequence derived from alignment at S-ischiensis_contig7:1368797..1377736- (Schizocladia ischiensis KU_0333)
ATGGATCGATTTCAGCAATTATTCAACCTCCCGGGGATGGGCGGGCAGGG GGGGGGGACTCCAGACGCACCGGTTGTGGACACAGCAGAGAAGGTCCACA TATCATCCCTCGCCTTGCTCAAGATGCTCAAGCACGGTGAGGGCTAGCGC GATACGCCCGTCCCGTCGCGGCACACCGGGGGACTAGTGCCTATGCTGGC GTGTGGGGTGCATATCACTGCGGTAGAAAGGCTCTTCACACTCTGCTGCC CCCCTCCCTACGCCCTCCGCCCGTTCTTCTTTTGTTGGAAAGGCCGCCGT TTTCGTGCTCCTCATCTGATGCAAGCGGCATATGTACATATGCCTAGTAG TGTATACCTACACGTGCTTAGCTCAAGATTAGGGCCGTTTGGTATAACTG GCCCCTGCAGCGCTTTTGCTACTCCTGTCGGGGGGCAAACCCGAAGTTTC GACTTAGGGCTGTCGGCCCTGCACGCGGGGTTATGTCGCAAGACTACTTA GCCAATAAGTACGTAGCACGTACTTGTACGTATATACTTCGAGTACATAT ATATACTCACGCTGTGCTTGCCGTAGTTCGGACGCCATTGACCCGTGTAG ACGTATATGCTTCGAAGTATATACTCGTATGTATATATACGTAGTATGTA CTCACGTTGTGCTTTGCCGTAGTCCCGAGACGGTTGACCACGTGCCTCGG TCGAGACGGAGCAGGCTATATATGTACTCGAGTACTCGTGCTATAAGTTA TATGTACTCACGTGGTGCTTGCCGTAGTCCCAAGACCATTGACCACGCGC CTCGGTCGAGCCGGAGCAGGATTATACTTCGTATTGAACGAACGGAGGGC AAACCCGAAGTTTCGACTTGGGGCTGTCGGCATTGCACGCACGGTTATGT CGCAAGGCAAACCAATGAGTACATATATAGTACATATATTGAACTCTCGA ATGTGATGTCAACCCCGCAGGGCGGGCGGGGGTCTCGATGGGTCTGATGC TGGGTCAGTTTGTGGACGGCTACACGGTGAACTGCATCGACGCGTAGTAG TAGTATATATATATATATATTGAACTACGTTTAGTATTGTCAGGAACAAC ACGGCAGTATATATATTGAACTCTCGAATGTGATGTCAACCCCGCAGGGC GGACAGGGGTCCCCATGGTGCTGGTGGGGCTGATTCTGGCTTCGGGTAGA GTAGATATTGTGTATACATTGGCGCGGGGTCAAATGGTCTCGGGACTACG GCAAGCGCCACGTGAGTACATACATATATATATATTAAACTATCGAATGT GACCTGTCAACCCCAAACTCATACACATGCGATTGTACCTCGTTGCAATT TATACGAATCACCCGGCAGGGCGGGCGGGGGTCCCCATGGAGGTGATGGG TCTGATGCTGGGGCAGTTTGTGGACGACTACACGGTGAACTGCATTGACG TCTTCGCCATGCCGCAGTCCGGCACGGGCGTGAGCGTCGAGGCGGTGGAC CCCGTGTTCCAGACCAAGATGCTCGACATGCTCAAGCAGACGGGGCGCCC TGAGGTGTGTACACTGTGCTGTATCGTACACTACTCGAGTAGGTGCAATC TGTATGTATTGCTCGTACTTACTATATATATAAACTTGCTATGCACCACG TGAGTACATATATATATATATATATATTGCTCGACCTTACTAAAAGGCGT GAGCGTCGAGGCGGTGGACCCCGTGTTCCAGACCAAGATGCTCGACATGC TCAAGCAGACGGGCCGCCCTGAGGTGTGTGCCCGTACCGTACAGCAGGTG CAATCTCTATGTATCGCTCGTACTAAAGTATCTTGGATCATTGATGGGTA TCTTGGGTCTGCCCCGGCCGTGTCCCGGCACGGTGAGGGACCCCCCTCCC CCGTTGGGCCTCGGTCTAGCAGGGGAGCCCCCCCCCCCACCCGGACTTTC ACAAGTCAGGGATGGGGGGGGGTATGGGCCACCCCTCCGCTTCTGGCGGG GGGTGGCCGCCCCCGCCCGCCCTGGCTCTGCCAGGGGAGGGAGGGGTCCT GGTCCGTCTCGACCGAGGCGCGTGGTCAATGGTCTCGGGACTACGGCAAG CACAACGTAAGTACATATAGTGCAATAGTATATATATAAGAGTACTTCGT AGATATATTGCTCGTACTAAAAAACTGGTCGCACTGCTTCCTGCTCATGA CAGCCAATCCTCCCCCGGCTTGCTCGCCCGGTCAAGGGACGATGGTAAAA TGCCGTTTGTCCCGGGGGCCCAATGGCGAGCCGGGGATCGGTGTGCGACC CACCGCCTGGCCGGTGAGAACCCGCTATGCTCCGTCCGGGCGAAATTGTA CTTAGGGACGCGTGGCCAATGGCCGAAAGGCTACCCTGCAGGGGCTGGCC GGCGGTCCAGCAAGTAGTGTACTGGGCCGACGGTCGGTGGCATGCACAGG ACGGGGTGTCCTGCCCAACATGAGTACTGACACGCTCATGACGCTGTGCT TGCCGTAGTTCGGAGACCGTTATTGTCAAACTATCCAAGTAGTTAAGGAG AACGGGTTAAAAAGAATTTGAGTACGAGTACCTATGGTTGAAGTTATGTA CTTGAAGTATATATGTACTCACGTTGTGCTTGCCGTAGTCCCAAGACCAT TGACCCCTTATGGCGCCTCGACCGAGACGGAGCAGCCCGTGGTGTGATGT GACGTGGGTTGATGTAATGTGTACTCTAAAGTACTGTAGCTTGACATCAC GTCACATCATTACTCGACCGAGACGGGACAGCCCCCCCCCTCCCCTGGCA GAGCCCACGTACTCAACAGCTCTTGTTTTCTCTCCCCCCCCGCCCCTCAC CCCGACAGTGAGTTGCTTGGGGATAGTTTTTGGTCCGGTGTGAGGAGTCC AGTTGACAAGATTGTAAAACATTGTCTGCGTTGCTTGTGGCAACAAAGAA CAGAGAGGTTGGCCGTAGCCAGCCTCCCCCCCCCCAAAGCACACGGTGCT CTGTCCCGTAGGGTCACCCCTGTGGGACTCGTGGTCAATGGCCGTATGGC TACGGCAGGCGACTCATGAGTACACCCCCCTCCCCCTCACCCCATCGTAG CCAGCCTCCCCAACAAGGAGAGGTTGGCTGTAGCAAGCCGCCTCCCCAAC AAGAGAGGAAGCAGCGCTCCGTCCTGCAGGGTAACCCCTGCGATGTGATG TCAAACTACTGCACTTTAGAGTGCACATCAAATCACATCACATCACACCA CATCACATAATTTTGTGATGCCAACCTACTGCACTTTAGAGTGCGCATCA AATCACATCACATCATTTTACACCACATCCAGTAGGGTCGCCCCTGTGGG ACTCGTGGTCAATGGCCACATGGCTACCGTGGCAGCCAACCCATGAATGC ACCCCCTCCCCTCTCACTACAATGTAAGAACACTCAAGTTCTTAATGGGA CAGCTACTACCGTAAAGGACGGTGTATAACGACACCCCACGCTACGCATT TTGGGCCGAAAAAATACCGACGGGGGGTCGCTATACAACGGGGGGTCGGT ATACTCCGTCACCCCCGCGAGAACGCACAGACCCACGGATATTTTATTTA TTTTGAAAAATGTCCATTTGTCGGGGATCGAACTCTCGCCAAATGCACGT CAGGGCGCTCGTTAGCCGCTGCACTAGCCACGCGGACCGAAAACAGCGCC CCAAAGCGCTCCTGAAACGTGAAACTCAAGGCTGAAAGTGGCTATTTGTG GGGGGGGTCCTCTTATACAGAGTCACCCCGCTGGTAAATTTGATGACCCC AAAATGTGCAAGGGGGGGTCCTTATACTAAGGGGGGCTGAAATACACCAT CCTTTACGGTAATACGAGAACCCTCAATCTCGCACACGTGCGATTGTACC TCATTACTACTTCGAAGTATATATATATACACCCGTATGTTGTCACGTGG TGCTTGCCGTACCCGAGACTGTTGACCCCGCGCCTCGTTCGAGGCGGAGC AGATATGTGAATCAACACCCCCTCCCCTCACCCCAATCGGGCGGGCCGGG CCGGGCCTCCCCGCCGCCAGCGATGGAATATCTAAGCAAATCAACCTTTT ATCGACAGTACTGATCTAGGTTGAGTGGTAGATAAGCGGCGAGTTCCAGG CCCCGTGCCAAAAGGCTCGTCCCAAAACAGGACTCAACGAAGCCCTTCTT CCCCTCGCAGAACAAAATGAAAACAAAAAATAAAGAAGGAAAGGGGCGGG GTAATGAGGAAAGGGAAGAGGCGCAGGGAAGTCTCTTGTGCTCACAGTGG GGCATGCGGGTGGGGCTGATCTATATATCTATCGATGGTCGATATTCGAC AGTTTGACCCACGCTAAATCCAAGTACTGTCGTATTGCCACCCACAAAAT CCATCGAGCCCGATAACTACCTACTGATCGATATTCCGTCACTGCCCGCC GCAGATGGTGGTGGGATGGTACCATTCCCACCCAGGCTTTGGCTGCTGGC TGTCAGGGGTGGACATCAACACGCAGCAGAGCTTTGAGCAGCTGAACCCG CGGGCGGTGTCGGTGGTGGTGGATCCCATCCAGTCGGTGAAGGGGAAGGT GGTCATAGACGCCTTTAGGCTGATAAACCCGCAGCTCATGATGCTCGGGC AGGAGCCGCGGCAGACGACGTCGAACGTGGGGCACCTGAACAAGCCCTCG ATTCAGGTGTGTGCGTGTGTGCGTGCGTGCGTGCGCGCGCATGTGTGTGT GTGTGTGTATATATATATATGTATGCGGCAGACGACGTCGAACGTGGGCC ACCTGAACAAGCCCTCGATTCAGGTGTGTGTGTGTGTGTGTGTGTGTGTG CATATATATATATACATATATATGCAGCAGACGACGTCGAACGTGGGCCC CTTGAACAGGCCCTCGATCCAGGTGTGTGTGTGTGTGTGTGCGTGCGCGT GTGTGTGCATACTCGTATACTACGTAATATATATTGCTCCGTCTCGAACG AGGCGCGGGTTCAATGGTCTCGGGACTACGGCAAGCACCACGTGTGTACA TATATATAATATATACACATATAGATGGCACGCAGCGTTGGCCACCTCAA CAAGCCCTCGATTCAGGTGTGTGTGTGTGTGTGATGTGCGTTACAAAAAC ACTGAGCTTTGACGTCACGTCACATCACGTTGTGTCATCGGTGTGGGTGT GTGTGTGTATGTGTGATGTGCGATAAAAAGCACTTACTTTTGGCATCACA TCACATCACATTGTGTCATCGGCGCGCGCGTGCGTGTGTGTGTGCATATA CGAGTATACTACGTAGTATATATGACATGCAACGTTGGCCGCCTCAACAA TCTCTTGGTTCAGGTGTCTGTGTGTCTATTTGTGTTTGTATAGAGTACGT GTGCTACTGTAGTACTATACACACTGGCAGTTCTCGAGTTGTGCTTGCAT TAGCCTGAAGACAATGGACCGCGTGCCTCTTCTGAGAGTCATGTGGTGCC ACTTAGAGCTCTACGAGTACACTACCTCTCCTCCTCCTCCTCCTCCTCCC CCTCCCCCTCCTCCCCCCCCACCACCTTCCTGCTTTGTGAAAAAGGAAGC CCTTTCGTTGAGGTCATTGGTGACATAGGCCCCACCTTGCTTGGCACCTT CTCTAGAGTAGTGTGTACTCACGCTCGGACGAGGTTTCTCGTCTCTGTGC ATGCCCTGGACCCGAGCGATGCTCGTCTTTGCTCCTTCTCGTGGATCGCT GGCCAGCTGTAGCTTTCGCCATTGGCCACGTGTTCTGTATAGAGTGGTGC TCCAGTTACTCAAGAGTACGCCAGTACATAGTACATACAGTGGACCGGCG TGACGTGCCGTCTGAGGAGGCGTGTAGTTGCTACTGTACATGGCACTCCC ACATACTGTACTGTGCTCCCTTCCGTGTTCTGTACTGTACAAGTGTGCTG TACAAGACCCTCCAAGGATGCGTATGGTTGCTACTGCACATGGCACTCCC ACATACTGTACTCTTCTTCCTTCCGTGTCATGTACTGTACTCGTACTGTA CTGTACACAAGTGTACTGTACAGTACCTACTTCTATGTAGTCAGTACGTA CTCGTAGTACAGCATACTACACAACGTGGACCGGCGTGACATGCCCTCCG AGGAGGCGTGTGGTTGCTACCTGATACTGTACTGTTCTTCCTTCCTTGTT CTGTACGGTACTGTACTGTACTGTACAAGTGCACCGAGGAGGCGTGTGGT TGCTACTTCGAAGTACGTGGCACTCCCACATACTGTGCTGTTCTTCCTTC CGTCAAGAACTTGATTCAAATTGTATCGAGGTACAATCGCACATGTGTGA GATTGAATGTTCTCGTATAGTGAGGTCCTGCGCCGCTGTACTCGTAGTAC TACAGTCAAGCGAACTAGTTCAAAAATGATTTGCGGATTTTCACATGTCG ACAACGGCTGAACTGCTGCCCCGATCGCGCTGCAAATCGGCGTGCAATGA GCCGGGGGCATGGGCAACACAATCCCACCTCCTCAGCACCATACTGCCCA AAATGGACAGCGAAGGTGCCCCTGTTATCTGGGAAAATGTGTTTTTAACT ACGTCGACTGACTGTACAGTAGTGCGAGGCTTGCGGTTCCTGCAGACTTT GCCCCATGGCTTACCCAACTAACACTCCCGCTAATTTATAGAGGACAGTC TTGGTATCGAACGTCTGACCCGTGGTTACTTGCACGCGTCCGTACATTTG TCCATCTGCTTGTCTGTCATGCGTGATGCATTGACGGCGACAATGGGGAT GCCGGGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGGAGGGGGGGG GTTATGTCCAGGGATGGAATATCTAGGCAAATCAACCCATTTATCTACAG TACTGATCTATATATCTATCGATAGTCGATATTCGATGTTTTGACCCACA CTCTATCCAAGCAGTTCGAGTAGTTAGTAGCGCCACCCACAAAATCAGTC GAGCCCGATAACTATCTTCTGATCCATATTCCATCACTGGTTTTTGCATG AAGATAAACAAGCGAATGAGAAAGAAGAGGTGTTCCTACTTACGCGAGCT ATGTCCCGTTGTTGTTGCAGGCGCTAATCCATGGGCTGAACCGGCACTAC TACAGCATTGTGATTGACTACCGCAAGAACGAGCTGGAGGAACAGATGCT GATGAACCTCAACCGGAAGCAGTGGACGCAGGGGCTGGTGATGACCCGCT TCGAGGACCACCAGGCCGCCAACCAGAAGACCGTTGAGGTGCATTGGTTC ATATAGGAAGGGCTTCCGTTGAGTCGTGTTTTGGGACGAGCCTTTTGGCA CGGGGCCTGGAAGTCGCCGCCTATCTACCACTCAAATACTTCCAAGTAAA TTGTAACGAGGTACAACCGCACGTGTGTGAGATTGACTGTCCTTCTATTA CCGTGCAGTTGTTCCATTTAAGAATTGAGTGTTCTTATACTAGTGATTAT CGCATCAAGTAACTAAGAACAGGGAGGGGGGGGGGAGGGGGGAAAGTTGA GGTGCGCTTCCACTCGCTACCGCTGCCACTACTAGTAGGTACAGTAGTAC GAGTGGCACTGCAGTAGAGTATAGGACGGCGGTAAAAACTAGTCTATCCC CTGCTTTGTGGCACAAGAGACCCCTTCTCCACTGTTATTCCTCCCGCCCT CCTCCGTCCTTGTTTTTCTTTGTTTTCTGCCCTGTATGGTCTGCGAGTGA AGGAGAGTGAAAGGACGGGCTTCCTGGGGGTGGGGCCCTGAGCTTGCATA TGTAGGGACACCTCTTCTTTCCCACTCGCTCGCTTGTCTTCTTCAGGGCC CCACGTGTCCTGGTTGTTGTTGAGTCCGTGGGGTTTTGTCTGTCCTACAA GCTTTTTGGGTAGGGTTGTGAACTGGTGCCGGTTTTTACCGGTCGGTATC AGTTAACTGGTTGAACCGGTTAACCGACCAGTGGCCTATCCTGTAGCCGG AGCGGGTGGCATGACCGTTAGCCATTACCGGCAACCGGTTCCAACCGACC GGTCACAAGACCGGTTAACAGTTGAACTGGTAGGCCTTGCCACTTCACAA CTCTAGTGCTGGGACATAGTTGGTCATTGCCGTTGCCACCAGTCACCGCC AGTTGTGGACCAAACGTATAGGTGATCGAAGTACTCTCATCACGACCATG CCCCCTGCACACGCACACACACACACACACACACACACGCATACACACAC CAGGCCATGCTCAAGCTGAGCAAGGAATACAACGAGCGGGTGCAGGAGGA GGAGGGCAAGACGGCCGAGGAGCTGGCGGTCATGAACGTCGGGAAGGTAG ACCCCAAGCGCCACCTAGAAACGGACGTCGTCGACCTCATGGCTGCAAAC ATCGTACAGTCCCTCGGTGCCATGCTGGACACCGTGATATTCTGAGAAGG CGGGGCCCGGCCCGAGGCCGAGGGAGTTCATCCGCTTGCTTGTGTCCGGG GTTGGCACTTGGAGGTTAATTAGGGCCTAATTAACCTTCGTTTTAGGTCT AATTGGCCCTAGCTACCTCTAATGAAGGGCCTAGAAGGGCACTTCTTAGG GGTTAAGTGCCACCCCTGCCGGCCCGAGGCCGAGGGAGTCGTTCGTCGAG TCCGCTTGCTTGTGTCTGCCTGAGGCTGTCGGAACCGCTGACAGTAGAGT GTATCTGTCGCAGGCCGGCACTGGCTGTGGCCGCCTCCGAGTTCGGGCCG CCGCTGGCGCCGCCGCCGCGGCTGTGCCGTCTCAGTTGCGGGTCACTTTC CGAGCCATGAAGTAGGGGGGGCATGTGTCCATGGGGCATTGTGCTCTGCG TGGCAATAACTGAATCAATTCGAAAACGAAACTGTAAACAAGAATGTGGC CCGCACCGGCACCTCGACTTGTGTTGTTCCTGTCGATGCA
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig7:1368797..1377736-

>mRNA_S-ischiensis_contig7.18066.1 ID=mRNA_S-ischiensis_contig7.18066.1|Name=mRNA_S-ischiensis_contig7.18066.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1866bp|location=Sequence derived from alignment at S-ischiensis_contig7:1368797..1377736- (Schizocladia ischiensis KU_0333)
ATGGATCGATTTCAGCAATTATTCAACCTCCCGGGGATGGGCGGGCAGGG
GGGGGGGACTCCAGACGCACCGGTTGTGGACACAGCAGAGAAGGTCCACA
TATCATCCCTCGCCTTGCTCAAGATGCTCAAGCACGATGGATCGATTTCA
GCAATTATTCAACCTCCCGGGGATGGGCGGGCAGGGGGGGGGGACTCCAG
ACGCACCGGTTGTGGACACAGCAGAGAAGGTCCACATATCATCCCTCGCC
TTGCTCAAGATGCTCAAGCACGGGCGGGCGGGGGTCCCCATGGAGGTGAT
GGGTCTGATGCTGGGGCAGTTTGTGGACGACTACACGGTGAACTGCATTG
ACGTCTTCGCCATGCCGCAGTCCGGCACGGGCGTGAGCGTCGAGGCGGTG
GACCCCGTGTTCCAGACCAAGATGCTCGACATGCTCAAGCAGACGGGGCG
CCCTGAGGGCGGGCGGGGGTCCCCATGGAGGTGATGGGTCTGATGCTGGG
GCAGTTTGTGGACGACTACACGGTGAACTGCATTGACGTCTTCGCCATGC
CGCAGTCCGGCACGGGCGTGAGCGTCGAGGCGGTGGACCCCGTGTTCCAG
ACCAAGATGCTCGACATGCTCAAGCAGACGGGGCGCCCTGAGATGGTGGT
GGGATGGTACCATTCCCACCCAGGCTTTGGCTGCTGGCTGTCAGGGGTGG
ACATCAACACGCAGCAGAGCTTTGAGCAGCTGAACCCGCGGGCGGTGTCG
GTGGTGGTGGATCCCATCCAGTCGGTGAAGGGGAAGGTGGTCATAGACGC
CTTTAGGCTGATAAACCCGCAGCTCATGATGCTCGGGCAGGAGCCGCGGC
AGACGACGTCGAACGTGGGGCACCTGAACAAGCCCTCGATTCAGATGGTG
GTGGGATGGTACCATTCCCACCCAGGCTTTGGCTGCTGGCTGTCAGGGGT
GGACATCAACACGCAGCAGAGCTTTGAGCAGCTGAACCCGCGGGCGGTGT
CGGTGGTGGTGGATCCCATCCAGTCGGTGAAGGGGAAGGTGGTCATAGAC
GCCTTTAGGCTGATAAACCCGCAGCTCATGATGCTCGGGCAGGAGCCGCG
GCAGACGACGTCGAACGTGGGGCACCTGAACAAGCCCTCGATTCAGGCGC
TAATCCATGGGCTGAACCGGCACTACTACAGCATTGTGATTGACTACCGC
AAGAACGAGCTGGAGGAACAGATGCTGATGAACCTCAACCGGAAGCAGTG
GACGCAGGGGCTGGTGATGACCCGCTTCGAGGACCACCAGGCCGCCAACC
AGAAGACCGTTGAGGCGCTAATCCATGGGCTGAACCGGCACTACTACAGC
ATTGTGATTGACTACCGCAAGAACGAGCTGGAGGAACAGATGCTGATGAA
CCTCAACCGGAAGCAGTGGACGCAGGGGCTGGTGATGACCCGCTTCGAGG
ACCACCAGGCCGCCAACCAGAAGACCGTTGAGGCCATGCTCAAGCTGAGC
AAGGAATACAACGAGCGGGTGCAGGAGGAGGAGGGCAAGACGGCCGAGGA
GCTGGCGGTCATGAACGTCGGGAAGGTAGACCCCAAGCGCCACCTAGAAA
CGGACGTCGTCGACCTCATGGCTGCAAACATCGTACAGTCCCTCGGTGCC
ATGCTGGACACCGTGATATTCTGAGCCATGCTCAAGCTGAGCAAGGAATA
CAACGAGCGGGTGCAGGAGGAGGAGGGCAAGACGGCCGAGGAGCTGGCGG
TCATGAACGTCGGGAAGGTAGACCCCAAGCGCCACCTAGAAACGGACGTC
GTCGACCTCATGGCTGCAAACATCGTACAGTCCCTCGGTGCCATGCTGGA
CACCGTGATATTCTGA
back to top