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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1033 |
| Cds size | 735 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815740.2125597-UTR-S-ischiensis_contig15:125102..125175 | 1622815740.2125597-UTR-S-ischiensis_contig15:125102..125175 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig15 125103..125175 + |
| 1695739886.557534-UTR-S-ischiensis_contig15:125102..125175 | 1695739886.557534-UTR-S-ischiensis_contig15:125102..125175 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig15 125103..125175 + |
| 1622815740.2357888-UTR-S-ischiensis_contig15:125910..126135 | 1622815740.2357888-UTR-S-ischiensis_contig15:125910..126135 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig15 125911..126135 + |
| 1695739886.5798264-UTR-S-ischiensis_contig15:125910..126135 | 1695739886.5798264-UTR-S-ischiensis_contig15:125910..126135 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig15 125911..126135 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815740.2240124-CDS-S-ischiensis_contig15:125175..125910 | 1622815740.2240124-CDS-S-ischiensis_contig15:125175..125910 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig15 125176..125910 + |
| 1695739886.5676932-CDS-S-ischiensis_contig15:125175..125910 | 1695739886.5676932-CDS-S-ischiensis_contig15:125175..125910 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig15 125176..125910 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig15.3480.1 >prot_S-ischiensis_contig15.3480.1 ID=prot_S-ischiensis_contig15.3480.1|Name=mRNA_S-ischiensis_contig15.3480.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=245bp
MASVQATISASICATDRGCAGWPRAVACPADVGASTVRPAPAGLLGVATA
PRPASCLCAAPGVRNPICAWGLCDPAAAAAVAAVRPSSVCIAPAMGLSPS
LPATLPGSPSPLVGPEPLLSGLMSPAVVVTMFAGAAAWGVSGAEASSAAT
LATRAAIQANFASISANAKARDIPTTRILSPSQDANSDSMCTVVDTKVTN
IFVWLAARTRGSPDLPSRAAFANPSTSERLASRTCACTGAGMSL* back to topmRNA from alignment at S-ischiensis_contig15:125103..126135+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig15.3480.1 ID=mRNA_S-ischiensis_contig15.3480.1|Name=mRNA_S-ischiensis_contig15.3480.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1033bp|location=Sequence derived from alignment at S-ischiensis_contig15:125103..126135+ (Schizocladia ischiensis KU_0333)
CTCCGCCTCCTTTCGATTGGCCACGCGCAGCTCCTCCGCCACTGCCGCCA
GGTCTTTGAGCGCCGCCTGGGCCATGGCATCCGTGCAGGCCACCATCTCG
GCCTCTATCTGTGCCACGGACAGGGGCTGTGCCGGCTGGCCCCGCGCGGT
CGCCTGCCCAGCAGACGTCGGTGCTTCTACTGTGCGGCCGGCACCGGCCG
GCTTGCTCGGAGTCGCAACCGCTCCCCGCCCAGCCAGCTGCTTGTGCGCC
GCACCCGGCGTACGGAACCCCATCTGCGCCTGGGGGTTGTGTGATCCGGC
GGCGGCGGCGGCGGTGGCAGCGGTCCGTCCATCCTCCGTGTGCATTGCGC
CTGCGATGGGTCTGTCACCCTCGTTGCCAGCCACACTGCCCGGCTCCCCC
TCCCCCCTTGTTGGACCTGAGCCTTTGTTGTCCGGTTTGATGTCGCCTGC
CGTCGTTGTCACCATGTTTGCCGGTGCAGCTGCATGGGGCGTTTCTGGGG
CCGAGGCATCCTCCGCGGCCACCCTGGCCACGCGTGCCGCCATCCAGGCC
AATTTCGCGTCGATCTCGGCGAACGCAAAAGCGCGGGACATCCCAACCAC
GCGCATCCTCTCCCCCTCGCAAGACGCAAATAGCGACTCCATGTGCACCG
TGGTTGACACCAAAGTCACCAATATTTTCGTGTGGCTAGCCGCCCGGACA
CGTGGGTCGCCAGACCTTCCTTCGCGGGCGGCCTTTGCCAATCCCTCCAC
CTCTGAGAGACTGGCTTCCAGGACCTGCGCCTGCACAGGAGCCGGAATGT
CCTTGTAGAAAGCTTCAAGGGTTTTCCGCAACGCTCCCAAGACAGCCTCT
ATGTCTGCAGGCGGGGATGACAGAGCCCGGATGACCAAGCGGAACGTGTT
CGGCCGCAGCCCGGGAGGTCCCCGGCCCCGCACGGCAGCCGTGCTCGATG
CTGCGGCGATCGGACCTGGAGACGGGGCTGCGGCCATCCTGGACACCGGG
TCCCATTCAGATTCTGCCGCTGCCGCGACCGCC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig15:125103..126135+ >mRNA_S-ischiensis_contig15.3480.1 ID=mRNA_S-ischiensis_contig15.3480.1|Name=mRNA_S-ischiensis_contig15.3480.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1470bp|location=Sequence derived from alignment at S-ischiensis_contig15:125103..126135+ (Schizocladia ischiensis KU_0333)
ATGGCATCCGTGCAGGCCACCATCTCGGCCTCTATCTGTGCCACGGACAG
GGGCTGTGCCGGCTGGCCCCGCGCGGTCGCCTGCCCAGCAGACGTCGGTG
CTTCTACTGTGCGGCCGGCACCGGCCGGCTTGCTCGGAGTCGCAACCGCT
CCCCGCCCAGCCAGCTGCTTGTGCGCCGCACCCGGCGTACGGAACCCCAT
CTGCGCCTGGGGGTTGTGTGATCCGGCGGCGGCGGCGGCGGTGGCAGCGG
TCCGTCCATCCTCCGTGTGCATTGCGCCTGCGATGGGTCTGTCACCCTCG
TTGCCAGCCACACTGCCCGGCTCCCCCTCCCCCCTTGTTGGACCTGAGCC
TTTGTTGTCCGGTTTGATGTCGCCTGCCGTCGTTGTCACCATGTTTGCCG
GTGCAGCTGCATGGGGCGTTTCTGGGGCCGAGGCATCCTCCGCGGCCACC
CTGGCCACGCGTGCCGCCATCCAGGCCAATTTCGCGTCGATCTCGGCGAA
CGCAAAAGCGCGGGACATCCCAACCACGCGCATCCTCTCCCCCTCGCAAG
ACGCAAATAGCGACTCCATGTGCACCGTGGTTGACACCAAAGTCACCAAT
ATTTTCGTGTGGCTAGCCGCCCGGACACGTGGGTCGCCAGACCTTCCTTC
GCGGGCGGCCTTTGCCAATCCCTCCACCTCTGAGAGACTGGCTTCCAGGA
CCTGCGCCTGCACAGGAGCCGGAATGTCCTTGTAGATGGCATCCGTGCAG
GCCACCATCTCGGCCTCTATCTGTGCCACGGACAGGGGCTGTGCCGGCTG
GCCCCGCGCGGTCGCCTGCCCAGCAGACGTCGGTGCTTCTACTGTGCGGC
CGGCACCGGCCGGCTTGCTCGGAGTCGCAACCGCTCCCCGCCCAGCCAGC
TGCTTGTGCGCCGCACCCGGCGTACGGAACCCCATCTGCGCCTGGGGGTT
GTGTGATCCGGCGGCGGCGGCGGCGGTGGCAGCGGTCCGTCCATCCTCCG
TGTGCATTGCGCCTGCGATGGGTCTGTCACCCTCGTTGCCAGCCACACTG
CCCGGCTCCCCCTCCCCCCTTGTTGGACCTGAGCCTTTGTTGTCCGGTTT
GATGTCGCCTGCCGTCGTTGTCACCATGTTTGCCGGTGCAGCTGCATGGG
GCGTTTCTGGGGCCGAGGCATCCTCCGCGGCCACCCTGGCCACGCGTGCC
GCCATCCAGGCCAATTTCGCGTCGATCTCGGCGAACGCAAAAGCGCGGGA
CATCCCAACCACGCGCATCCTCTCCCCCTCGCAAGACGCAAATAGCGACT
CCATGTGCACCGTGGTTGACACCAAAGTCACCAATATTTTCGTGTGGCTA
GCCGCCCGGACACGTGGGTCGCCAGACCTTCCTTCGCGGGCGGCCTTTGC
CAATCCCTCCACCTCTGAGAGACTGGCTTCCAGGACCTGCGCCTGCACAG
GAGCCGGAATGTCCTTGTAG back to top
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