mRNA_S-ischiensis_contig15.3474.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig15.3474.1 vs. uniprot
Match: D8LK86_ECTSI (Harp (Smarcal1)-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK86_ECTSI) HSP 1 Score: 320 bits (819), Expect = 2.840e-94 Identity = 172/350 (49.14%), Postives = 232/350 (66.29%), Query Frame = 2
Query: 5 EEVRFRMSKIPEKLAEALYRFQEESVRFAICKEGRMLMGDEMGLGKTLQALAVACCYREDWPLLVICPSSVRRNWQKEALKWVPGLLKSKVKVVENSKSDLRE-ADVFVLSYDIASRLSDRGVLKPGTFQFVVADESHYLKSRDAKRTQVVVPLMQMAARALCVTGTPALARPQELFPQLNALLPDSFKDFYTFAVRYCDAKQGPWGFDASGCSNAAELKLLLELSIMKRRLKEEVLSDMLPEKDRQMVKVPLDSKVMQEVAELMVEKTQVDAQIASLDFNADEDERNALNAAKRGCMSRLYNATGRAKISGVIAHLLKLLDSTPGDGTLERQGHLDAAFPSEGHAKGDG 1051
+E+ RM +PE L LY+FQ E +RFAI K+G++L+GDEMGLGKTLQALAVAC YREDWP+LV+ PSS++ NW+ EA+KWVPGL K +++V ++K +R+ A + ++SYD+A+R+ ++ +L G F+ V+ADESHYLKS DAKR+Q VVPLMQ A+RA+CVTGTPAL+RP ELF QL AL+P +F+ F+ FAVRYC A QGP+G D +G SN+AELK++LE +IM RRLKEEV AELM +K + + + S+ AD+ E L + ++LY +GRAKI GV+ HL +G L P+EGH G G
Sbjct: 99 DEISLRMESVPEDLMSTLYQFQVECLRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKEAIQIVRDAKMGVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRYCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEV-------------------------AELMEQKEAIKSSLGSV---ADDAEMGRLVGQMKSLTTKLYIESGRAKIQGVLDHL---------------RGMLTEELPAEGHPPGGG 405
BLAST of mRNA_S-ischiensis_contig15.3474.1 vs. uniprot
Match: L1JAD3_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JAD3_GUITC) HSP 1 Score: 242 bits (617), Expect = 1.000e-70 Identity = 142/328 (43.29%), Postives = 205/328 (62.50%), Query Frame = 2
Query: 26 SKIPEKLAEALYRFQEESVRFAICKEGRMLMGDEMGLGKTLQALAVACCYREDWPLLVICPSSVRRNWQKEALKWVPGLLKS--KVKVVENSKSDLREADVFVLSYDIASRLSDRGVLKPGTFQFVVADESHYLKSRDAKRTQVVVPLMQMAARALCVTGTPALARPQELFPQLNALLPDSFKDFYTFAVRYCDAKQGPWGFDASGCSNAAELKLLLELSIMKRRLKEEVLSDMLPEKDRQMVKVPLDSKVMQEVAELMVEKTQVDAQIAS---LDFNADEDERNALNAA----KRGCM-----SRLYNATGRAKISGVIAHLLKLLD 967
S +P L +L FQ + VRFA+ ++GR+L+GDEMGLGKTLQALAVA Y+ +WPLL+ICPSS+R NW +E +W+ G+ + +V+VV ++ DV ++SYD+A+R+SD +K +F+ V+ADESHY+K+ A RT+ +PL++ A+RA+ ++GTPAL+RP EL QL L P F F RYC+AKQG WG D SG S EL +LL S+M RRLK EVL + LP K RQ V + + +K ++++ +M VD + +S DE E+ N +RG M + Y TG AK+ V ++L L++
Sbjct: 7 SALPSLLKSSLLPFQRDGVRFALKRKGRVLIGDEMGLGKTLQALAVAAAYKREWPLLIICPSSLRLNWAQECSRWLEGMKEEPLEVQVVMKGSDAIKGVDVTIVSYDLATRMSD--AIKASSFKVVIADESHYIKTDKALRTRACMPLLRQASRAILLSGTPALSRPVELLSQLQCLQPKIFSSKREFQRRYCNAKQGRWGLDTSGASCLQELSILLSSSVMIRRLKREVLVE-LPAKRRQKVFINVANKDLKKIQSIMNRIDSVDMRPSSSPPAGHAGDEKEQVGENGGERKRRRGSMLDSLITEAYLETGLAKLPEVCSYLADLIE 331
BLAST of mRNA_S-ischiensis_contig15.3474.1 vs. uniprot
Match: A0A1Y1UYY1_9FUNG (Uncharacterized protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1UYY1_9FUNG) HSP 1 Score: 239 bits (609), Expect = 3.500e-70 Identity = 137/314 (43.63%), Postives = 203/314 (64.65%), Query Frame = 2
Query: 29 KIPEKLAEALYRFQEESVRFAICKEGRMLMGDEMGLGKTLQALAVACCYREDWPLLVICPSSVRRNWQKEALKWVPGLLKSKVKVVENSKSDLREAD-VFVLSYDIASRLSDRGVLKPGTFQFVVADESHYLKSRDAKRTQVVVPLMQMAARALCVTGTPALARPQELFPQLNALLPDSFKDFYTFAVRYCDAKQGPWGFDASGCSNAAELKLLLELSIMKRRLKEEVLSDMLPEKDRQMVKVPLDSKVMQEVAELMVEKTQVDAQIASLDFNADEDERNALNAAKRGCMSRLYNATGRAKISGVIAHLLKLLD 967
+IP L + L RFQ VR AI K GR+ + DEMGLGKT+QALA+ Y+ DWP L+ICPSS+R W E KW+ L + ++V+ +K LR+ + +LSYDI SR +K F VVADESHYLK++DAKRT+++ P+++ + AL +TGTPAL+RP EL+ QLN+L+P + + F +RYCDAK+ +G+D +G SN +ELK LLE ++M RRLK++VL + LP K RQ + + + K ++E+ +LM E ++D I + ++ +E + L K+ + LYN++ I V AH +LL+
Sbjct: 4 RIPNYLLKKLMRFQFMGVRDAILKCGRVFLCDEMGLGKTIQALAICSYYKNDWPCLIICPSSLRLTWASEIKKWL-NLDEDDIQVIFTTKDSLRKTSKIVILSYDIISRKGIEDQIKSIKFNVVVADESHYLKNKDAKRTKIICPIIKNSKYALLLTGTPALSRPIELYTQLNSLIPRAISNPIKFGLRYCDAKETKFGWDFNGSSNLSELKQLLEKTVMIRRLKKDVLEE-LPAKVRQCIMIDIPKKSLKEIDKLMNESKKLDISINKMKYSNNETAKKKLEMQKKALL--LYNSSDSKFI--VFAHHQELLN 311
BLAST of mRNA_S-ischiensis_contig15.3474.1 vs. uniprot
Match: A0A0L0H6Z5_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0H6Z5_SPIPD) HSP 1 Score: 246 bits (628), Expect = 1.110e-69 Identity = 141/317 (44.48%), Postives = 206/317 (64.98%), Query Frame = 2
Query: 26 SKIPEKLAEALYRFQEESVRFAICKEGRMLMGDEMGLGKTLQALAVACCYREDWPLLVICPSSVRRNWQKEALKWVPGLLKSKVKVVENSKSDLREADVFVL-SYDIASRLSDRGVLKPGTFQFVVADESHYLKSRDAKRTQVVVPLMQMAARALCVTGTPALARPQELFPQLNALLPDSFKDFYTFAVRYCDAKQGPWGFDASGCSNAAELKLLLELSIMKRRLKEEVLSDMLPEKDRQMVKVPLDSKVMQEVAELMVEKTQVDAQIASLDFNADEDERNALNAAKRGCMSRLYNATGRAKISGVIAHLLKLLDST 973
+KIP + E L FQ+ V AI K+G++L+GDEMGLGKT+QA+A+ YR +WP++VICPSS+R WQ E KW+ L + +++V+ SK + FV+ SYD+ASR + L+ ++ VVADESH+LKSR+AKRT+ ++PL++ A RAL ++GTPAL+RP ELF Q++ALLP SF F VRYCD KQ +G+D +G SN AEL LE +++ RRLK++VL + LP K RQ V V + +K Q A LM + +++ ++ ++ R + KR + ++Y TG AK+ V +L +L D T
Sbjct: 192 TKIPPYVYERLMDFQKVGVLEAIKKQGKVLLGDEMGLGKTIQAIAICAFYRSEWPVMVICPSSLRLTWQAEICKWLD-LPEERIQVIFASKDRVSSESHFVITSYDLASREDIKKQLEKAKYRIVVADESHFLKSREAKRTKTIIPLLKGAKRALLLSGTPALSRPIELFTQISALLP-SFTTAVQFGVRYCDGKQNRYGWDFTGNSNIAELHWFLEQTVLIRRLKKDVLKE-LPSKTRQCVYVDIAAKSKQTFAALMAQNEEINERLEDAKTASNTKHRQEVTLEKRTLLIQMYRETGIAKLPAVQEYLRELHDHT 505
BLAST of mRNA_S-ischiensis_contig15.3474.1 vs. uniprot
Match: A0A507EUN4_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507EUN4_9FUNG) HSP 1 Score: 243 bits (619), Expect = 5.980e-69 Identity = 139/317 (43.85%), Postives = 204/317 (64.35%), Query Frame = 2
Query: 26 SKIPEKLAEALYRFQEESVRFAICKEGRMLMGDEMGLGKTLQALAVACCYREDWPLLVICPSSVRRNWQKEALKWVPGLLKSKVKVVENSKSDLREADVFVL-SYDIASRLSDRGVLKPGTFQFVVADESHYLKSRDAKRTQVVVPLMQMAARALCVTGTPALARPQELFPQLNALLPDSFKDFYTFAVRYCDAKQGPWGFDASGCSNAAELKLLLELSIMKRRLKEEVLSDMLPEKDRQMVKVPLDSKVMQEVAELMVEKTQVDAQIASLDFNADEDERNALNAAKRGCMSRLYNATGRAKISGVIAHLLKLLDST 973
+KIP + E L FQ+ V AI K+G++L+GDEMGLGKT+QA+A+ YR +WP++VICPSS+R WQ E KW+ L + ++V+ SK + FV+ SYD+ASR + L+ +Q VVADESH+LKSR+AKRT+ +VPL++ A RAL ++GTPAL+RP ELF Q++AL+P SF F +RYCD KQ +G+D +G SN EL LE +++ RRLK++VL + LP K RQ V V + ++ Q A LM + +++ ++ ++ R + KR + ++Y TG AK+ V +L +L D T
Sbjct: 94 TKIPPSVYERLMEFQKVGVLEAIKKQGKVLLGDEMGLGKTIQAIAICAFYRNEWPVMVICPSSLRLTWQAEICKWLD-LPEETIQVIFASKDRVSSERHFVITSYDLASREDIKKQLEKAKYQIVVADESHFLKSREAKRTKKIVPLLKRAKRALLLSGTPALSRPIELFTQISALVP-SFTTAVQFGIRYCDGKQNRYGWDFTGNSNIGELHWFLEQTVLIRRLKKDVLKE-LPSKTRQCVYVDIAAQSKQTFAVLMAQNEEINERLEDAKRASNTKHRQEVTLEKRSFLIQMYRQTGIAKLPAVQEYLRELHDHT 407
BLAST of mRNA_S-ischiensis_contig15.3474.1 vs. uniprot
Match: A0A6G1RIW1_9GRUI (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 (Fragment) n=1 Tax=Hypotaenidia okinawae TaxID=2861861 RepID=A0A6G1RIW1_9GRUI) HSP 1 Score: 235 bits (599), Expect = 6.060e-69 Identity = 132/316 (41.77%), Postives = 192/316 (60.76%), Query Frame = 2
Query: 23 MSKIPEKLAEALYRFQEESVRFAICKEGRMLMGDEMGLGKTLQALAVACCYREDWPLLVICPSSVRRNWQKEALKWVPGLLKSKVKVVENSKSDLREADVFVLSYDIASRLSDRGVLKPGTFQFVVADESHYLKSRDAKRTQVVVPLMQMAARALCVTGTPALARPQELFPQLNALLPDSFKDFYTFAVRYCDAKQGPWGFDASGCSNAAELKLLLELSIMKRRLKEEVLSDMLPEKDRQMVKVPLDSKVMQEVAELMVEKTQVDAQIASLDFNADEDERNALNAAKRGCMSRLYNATGRAKISGVIAHLLKLLDS 970
+S + K+ +L FQ E V FAI ++GR+L+ D+MGLGKT+QA+ +A YRE+WPLLV+ PSSVR W + +W+P L V+ K L + + ++S+D+ S++ G TFQ V+ DESH+LK+ R Q +PL++ A R + ++GTPA++RP EL+ Q+ A+ P F F+TF +RYCDAK+ PWG+D +G SN ELK+LLE SIM RRLK VLS LP K R+MV V + + A L E A+ + + + + E+ AL YN T AKI V+ ++L+LL+S
Sbjct: 98 LSVVDSKIVMSLMPFQREGVNFAILRDGRLLLADDMGLGKTIQAICIAAYYREEWPLLVVTPSSVRFTWAEAFHRWLPSLSPGSTNVIVTGKDSLTASLINIISFDLLSKM---GKQLKSTFQVVIIDESHFLKNMKTARCQAAMPLLKAAKRVILLSGTPAMSRPSELYTQIVAVQPAFFPQFHTFGLRYCDAKKMPWGWDYTGSSNLTELKVLLEESIMIRRLKSNVLSQ-LPAKQRKMVVVAPEGISARTKAALAAE-----AKKMAKGYESKQQEKEALLL--------FYNKTAEAKIHSVVEYILELLES 396
BLAST of mRNA_S-ischiensis_contig15.3474.1 vs. uniprot
Match: A0A1Y1XQA7_9FUNG (Uncharacterized protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XQA7_9FUNG) HSP 1 Score: 243 bits (620), Expect = 4.590e-68 Identity = 131/311 (42.12%), Postives = 203/311 (65.27%), Query Frame = 2
Query: 44 LAEALYRFQEESVRFAICKEGRMLMGDEMGLGKTLQALAVACCYREDWPLLVICPSSVRRNWQKEALKWVPGLLKSKVKVVENSKSDLREAD-VFVLSYDIASRLSDRGVLKPGTFQFVVADESHYLKSRDAKRTQVVVPLMQMAARALCVTGTPALARPQELFPQLNALLPDSFKDFYTFAVRYCDAKQGPWGFDASGCSNAAELKLLLELSIMKRRLKEEVLSDMLPEKDRQMVKVPLDSKVMQEVAELMVEKTQVDAQIASLDFNADEDERNALNAAKRGCMSRLYNATGRAKISGVIAHLLKLLDST 973
L L RFQ VR AI K GR+ + DEMGLGKT+QALA+ Y+ +WP L+ICPSS+R W E KW+ + + ++V+ ++K +R + + SYD+ SR +K F VVADESHYLK++DAKRT+++ P+++ + AL +TGTPAL+RP EL+ QLN+L+P + + F +RYCDAK+ +G+D +G SN +ELKLLLE ++M RRLK++VL + LP K RQ + + + K M+E+ +L++E +DA + +++D + L K+ + +LY+ T RAKI V ++ +L +++
Sbjct: 251 LLSKLMRFQYMGVREAILKNGRVFLCDEMGLGKTIQALAICSYYKTNWPCLIICPSSLRLTWASEIHKWL-NIDEEFIQVIFSAKDVIRTTSKIIIASYDLISRKGMDEQIKKAKFNVVVADESHYLKNKDAKRTKIICPIIKNSKYALLLTGTPALSRPIELYTQLNSLIPRAISNPVKFGLRYCDAKETKFGWDFTGSSNLSELKLLLERTVMIRRLKKDVLME-LPPKVRQCIMIEIPKKSMKELDKLLLESKSIDASMNKYRYSSDNTTKQKLELQKKSLLVKLYSETARAKIPSVQEYIGELYNNS 559
BLAST of mRNA_S-ischiensis_contig15.3474.1 vs. uniprot
Match: R0KCM2_ANAPL (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 (Fragment) n=1 Tax=Anas platyrhynchos TaxID=8839 RepID=R0KCM2_ANAPL) HSP 1 Score: 241 bits (614), Expect = 4.940e-68 Identity = 138/316 (43.67%), Postives = 197/316 (62.34%), Query Frame = 2
Query: 23 MSKIPEKLAEALYRFQEESVRFAICKEGRMLMGDEMGLGKTLQALAVACCYREDWPLLVICPSSVRRNWQKEALKWVPGLLKSKVKVVENSKSDLREADVFVLSYDIASRLSDRGVLKPGTFQFVVADESHYLKSRDAKRTQVVVPLMQMAARALCVTGTPALARPQELFPQLNALLPDSFKDFYTFAVRYCDAKQGPWGFDASGCSNAAELKLLLELSIMKRRLKEEVLSDMLPEKDRQMVKVPLDSKVMQEVAELMVEKTQVDAQIASLDFNADEDERNALNAAKRGCMSRLYNATGRAKISGVIAHLLKLLDS 970
+S + K+ +L FQ E V FAI + GR+L+ D+MGLGKT+QA+ VA YR++WPLLV+ PSSVR W + +W+P L V+ K +L + + ++S+D+ S++ + LK TFQ V+ DESHYLK+ R + +PL++ A R + ++GTPA++RP EL+ Q+ A+ PD F F+TF +RYCDAKQ PWG+D SG SN AELK+LLE SIM RRLK +VLS LP K R+MV V + + A L VE A+ + + + E+ AL YN T AKI V+ ++L+LL+S
Sbjct: 198 LSVVDSKIVTSLMPFQREGVNFAIFRNGRLLLADDMGLGKTIQAICVAAYYRKEWPLLVVTPSSVRFTWAEAFHRWLPSLRPGSTNVIVTGKDNLTGSLINIISFDLLSKMDKQ--LK-NTFQVVIIDESHYLKNVKTARCRAAMPLLKAARRVILLSGTPAMSRPMELYTQIAAVQPDFFPQFHTFGLRYCDAKQMPWGWDYSGSSNLAELKILLEESIMIRRLKSDVLSQ-LPAKQRKMVVVSPEGINAKTKAALAVE-----AKKMAKGYGNKQQEKEALLL--------FYNRTAEAKIHSVVEYILELLES 496
BLAST of mRNA_S-ischiensis_contig15.3474.1 vs. uniprot
Match: A0A3S1BYG0_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1BYG0_ELYCH) HSP 1 Score: 239 bits (609), Expect = 6.400e-67 Identity = 140/316 (44.30%), Postives = 198/316 (62.66%), Query Frame = 2
Query: 23 MSKIPEKLAEALYRFQEESVRFAICKEGRMLMGDEMGLGKTLQALAVACCYREDWPLLVICPSSVRRNWQKEALKWVPGLLKSKVKVVENSKSDLREADVFVLSYDIASRLSDRGVLKPGTFQFVVADESHYLKSRDAKRTQVVVPLMQMAARALCVTGTPALARPQELFPQLNALLPDSFKDFYTFAVRYCDAKQGPWGFDASGCSNAAELKLLLELSIMKRRLKEEVLSDMLPEKDRQMVKVPLDSKVMQEVAELMVEKTQVDAQIASLDFNADEDERNALNAAKRGCMSRLYNATGRAKISGVIAHLLKLLDS 970
+S +PE L L FQ E V AI ++GR+L+ D+MGLGKTLQA+ VA YREDWPLLV+ PSSVR +W ++ +W+P + V VV++SK+ V ++SYD+ +R + LK F+ ++ DESH+LK+ + RT+V +PL+ A R L ++GTPAL+RP EL+ Q++A+ P FK F+ F +RYCDAKQ PWG+D SG SN EL+LLLE +M RR K++VLS LP K RQMV LD + + +L KT + D+ KRG + + + T RAK+S V ++L LL+S
Sbjct: 208 LSSVPEGLVNTLKAFQREGVNIAIHRKGRLLLADDMGLGKTLQAICVAAYYREDWPLLVVAPSSVRFDWAQQICRWLPNVSNCDVNVVQSSKTSATSGLVNIISYDLLARKALE--LKQKNFRIIIMDESHFLKNYKSGRTRVAMPLLMSAKRVLLLSGTPALSRPSELYCQISAVCPHMFK-FHDFGLRYCDAKQLPWGWDYSGSSNMLELQLLLEKQVMIRRQKKDVLSQ-LPAKTRQMV--VLDPGSVNQHKDL---KTALKIM----------DKVKKKGQEKRGALLQYFQETARAKMSAVREYILDLLES 504
BLAST of mRNA_S-ischiensis_contig15.3474.1 vs. uniprot
Match: A0A2P4TA46_BAMTH (Uncharacterized protein (Fragment) n=1 Tax=Bambusicola thoracicus TaxID=9083 RepID=A0A2P4TA46_BAMTH) HSP 1 Score: 234 bits (597), Expect = 6.790e-67 Identity = 135/316 (42.72%), Postives = 195/316 (61.71%), Query Frame = 2
Query: 23 MSKIPEKLAEALYRFQEESVRFAICKEGRMLMGDEMGLGKTLQALAVACCYREDWPLLVICPSSVRRNWQKEALKWVPGLLKSKVKVVENSKSDLREADVFVLSYDIASRLSDRGVLKPGTFQFVVADESHYLKSRDAKRTQVVVPLMQMAARALCVTGTPALARPQELFPQLNALLPDSFKDFYTFAVRYCDAKQGPWGFDASGCSNAAELKLLLELSIMKRRLKEEVLSDMLPEKDRQMVKVPLDSKVMQEVAELMVEKTQVDAQIASLDFNADEDERNALNAAKRGCMSRLYNATGRAKISGVIAHLLKLLDS 970
+S + K+ +L FQ E V FAI K GR+L+ D+MGLGKT+QA+ +A Y+++WPLLV+ PSSVR W + +W+P L V+ SK L + + ++S+D+ S++ + LK TFQ V+ DESHYLK+ R + +PL++ A R + ++GTPA++RP EL+ Q+ A+ P F F+TF +RYCDAK+ PWG+D SG SN AELK+LLE SIM RRLK +VLS LP K R+MV V + + A L E A+ + + + + E+ AL +N T AKI VI ++L LL+S
Sbjct: 41 LSVVDSKIVTSLMPFQREGVNFAILKNGRLLLADDMGLGKTVQAICIAAYYQKEWPLLVVTPSSVRFTWAEAFHRWLPSLRPGSTNVIVTSKDSLTASLINIISFDLLSKMDKQ--LK-STFQVVIIDESHYLKNIKTARCRAAMPLLKAARRVILLSGTPAMSRPAELYTQIAAVQPGFFPQFHTFGLRYCDAKKMPWGWDYSGSSNLAELKILLEESIMIRRLKSDVLSQ-LPAKQRKMVVVAPEGINAKTKAMLAAE-----AKKMAKGYESKQQEKEALLL--------FFNKTAEAKIHSVIEYILDLLES 339 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig15.3474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig15.3474.1 >prot_S-ischiensis_contig15.3474.1 ID=prot_S-ischiensis_contig15.3474.1|Name=mRNA_S-ischiensis_contig15.3474.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=492bp MSKIPEKLAEALYRFQEESVRFAICKEGRMLMGDEMGLGKTLQALAVACCback to top mRNA from alignment at S-ischiensis_contig15:104167..112944+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig15.3474.1 ID=mRNA_S-ischiensis_contig15.3474.1|Name=mRNA_S-ischiensis_contig15.3474.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8778bp|location=Sequence derived from alignment at S-ischiensis_contig15:104167..112944+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig15:104167..112944+ >mRNA_S-ischiensis_contig15.3474.1 ID=mRNA_S-ischiensis_contig15.3474.1|Name=mRNA_S-ischiensis_contig15.3474.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2952bp|location=Sequence derived from alignment at S-ischiensis_contig15:104167..112944+ (Schizocladia ischiensis KU_0333)back to top |