mRNA_S-ischiensis_contig14.3369.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig14.3369.1
Unique NamemRNA_S-ischiensis_contig14.3369.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig14.3369.1 vs. uniprot
Match: A0A5N6P6T5_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P6T5_9ASTR)

HSP 1 Score: 157 bits (397), Expect = 3.990e-40
Identity = 109/251 (43.43%), Postives = 147/251 (58.57%), Query Frame = 1
Query:    4 SRSIHVLDIYVNDLLITGSNPDAVEDMLKSMKAKFDTQDLGNATSVLGMEMHHNRDSKVLHLSQRKYADNILRRFGMEMCNSAPTP--GDFDAFHPVGKELLSSIDHGTYREIVRSLLCLCRLTRPDISCAVMQLSRVVSKP-----DALLRLERGAGSILKGTLSMGIKYVGKDVSSSGPVLEGYCDADYRGDLATRRSTTGYVYVYVLAQGPIVWDSKLQ-TIAQSSTESEYIGLASAGNEAVYLRELL 732
            SR + VL +YV+DL+ITG   D ++ +  ++  +F  ++LG     LG+E+H+  D  VLH  Q KYA ++L RF M MC  A TP       +   GKEL    D   YR+IV SL+ L  +TRPDIS  V  LSR +  P      A+ RL R     +KG+++ GI++  K    S P L GYCDADY GDL TRRST GYV++Y   Q PI+W SK Q T++ S+TE+EY   A A  E V++  LL
Sbjct:  945 SRVVMVL-VYVDDLVITGDVEDEIQQLKYNLNIQFKMKNLGKLVHFLGLEIHYGDDKLVLH--QSKYALDLLSRFKMNMCKPAVTPMEASLKLYADDGKELA---DPTEYRKIVGSLIYL-TITRPDISFTVGVLSRYMENPCKSHMHAVKRLLR----YVKGSVTQGIEF--KREFESEPKLVGYCDADYAGDLNTRRSTIGYVFMY--GQSPILWCSKRQPTVSLSTTEAEYRAAAMAAQECVWVMLLL 1180          
BLAST of mRNA_S-ischiensis_contig14.3369.1 vs. uniprot
Match: A0A6H5LCH2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCH2_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 5.680e-37
Identity = 88/242 (36.36%), Postives = 139/242 (57.44%), Query Frame = 1
Query:   28 IYVNDLLITGSNPDAVEDMLKSMKAKFDTQDLGNATSVLGMEMHHNRDSKVLHLSQRKYADNILRRFGMEMCNSAPTPGDFDAFHPVGKELLSSIDHGT-YREIVRSLLCLCRLTRPDISCAVMQLSRVVSKPDA-----LLRLERGAGSILKGTLSMGIKYVGKDVSSSGPVLEGYCDADYRGDLATRRSTTGYVYVYVLAQGPIVWDSKLQTI-AQSSTESEYIGLASAGNEAVYLRELL 732
            +YV+D+L+TG+N + V  +++ MK +F+T DLG+A  ++GM +H NRD+  + L+Q  Y   +L +FGM   +   TP +      V +E   + D  T +R    S L +CR +RPD+S  ++ L++ ++KP       L RL R     LKGT S+GI Y   + +S+G  L  Y D+D+ GD+  R+STTG +    LA G +   +  QT+ A SS E+EY+ ++ A    +Y R LL
Sbjct:    2 VYVDDILLTGTNEELVSTIIEQMKERFETVDLGDAKFIVGMAIHRNRDAGTILLTQEAYTKAVLAKFGMADLHPTKTPAEVGPMSTVVEEETLTPDETTMFRSATGSALYICRKSRPDLSHTILVLTKSMAKPGTKAWAKLKRLMR----YLKGTASLGITY--SEDASNGGKLTTYVDSDFAGDIDDRKSTTGVIIE--LAGGVVDSTATKQTVTAVSSAEAEYVAMSKACKIILYWRHLL 235          
BLAST of mRNA_S-ischiensis_contig14.3369.1 vs. uniprot
Match: A0A094G7N8_9PEZI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pseudogymnoascus sp. VKM F-4516 (FW-969) TaxID=1420910 RepID=A0A094G7N8_9PEZI)

HSP 1 Score: 143 bits (360), Expect = 2.280e-36
Identity = 91/240 (37.92%), Postives = 133/240 (55.42%), Query Frame = 1
Query:   19 VLDIYVNDLLITGSNPDAVEDMLKSMKAKFDTQDLGNATSVLGMEMHHNRDSKVLHLSQRKYADNILRRFGMEMCNSAPTPGDFDAFHPVGKELLSSIDHGTYREIVRSLLCLCRLTRPDISCAVMQLSRVVSKPDAL-LRLERGAGSILKGTLSMGIKYVGKDVSSSGPVLEGYCDADYRGDLATRRSTTGYVYVYVLAQGPIVWDSKLQTI-AQSSTESEYIGLASAGNEAVYLRELL 732
            ++ +YV+DL I G N D ++  +K +K  F  +DLG     LG+E+ ++  +  L L Q KY   +L RF +   +   TP   +      KE  +  +   ++  + SLL L   TRPDI+ A + L+R  S P    +         L  T  +GI Y  +  ++    L GYCDADY GDLAT +ST GY++   LA+GPI+W SKLQ+I AQS+TE+EYI +  A  EAVY++ LL
Sbjct:  192 IISLYVDDLAIIGPNLDTIKAFIKELKNYFKLKDLGIIKDYLGVEISYDIKNGKLKLGQSKYIQKVLDRFNINNKSPKYTPIKANIKLEPNKEQATPKEIKWFQMAIGSLLYLAMATRPDITYATILLARFASNPSIEHVNAINNIFKYLSKTKDLGIIYTREGDNTD--YLSGYCDADYAGDLATAKSTNGYIFY--LAKGPIMWKSKLQSIIAQSTTEAEYIAINIASKEAVYIKSLL 427          
BLAST of mRNA_S-ischiensis_contig14.3369.1 vs. uniprot
Match: A0A0V0IN51_SOLCH (Putative ovule protein n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0IN51_SOLCH)

HSP 1 Score: 142 bits (359), Expect = 5.690e-36
Identity = 94/248 (37.90%), Postives = 138/248 (55.65%), Query Frame = 1
Query:   13 IHVLDIYVNDLLITGSNPDAVEDMLKSMKAKFDTQDLGNATSVLGMEMHHNRDSKVLHLSQRKYADNILRRFGMEMCNSAPTPGDFDAFHPVGKELLSSIDHG------TYREIVRSLLCLCRLTRPDISCAVMQLSRVVSKPDAL-LRLERGAGSILKGTLSMGIKYVGKDVSSSGPVLEGYCDADYRGDLATRRSTTGYVYVYVLAQGPIVWDSKLQ-TIAQSSTESEYIGLASAGNEAVYLRELL 732
            + V+ +YV+DLL+TGSN   V   ++ M+ KF+  DLG  +  LGME+H  + +  + +SQRKYA +IL+RF ME C S PTP        V  E +S  + G       YR ++ SLL L   TRPD+      LSR +  P  + L + +     +KGT   GI +  ++       L GY D+D+ G +   +ST+GY +   L  G   W+SK Q  +AQSS E+EYI  A A N+A++LR++L
Sbjct:  147 VFVVSLYVDDLLVTGSNKAMVNQFMQEMETKFEMSDLGEMSYFLGMEIH--QVTAGIFISQRKYAWDILKRFKMERCKSVPTP-------LVHNEKISKFEGGYRADPTVYRSLIGSLLYL-TATRPDLMFTTSLLSRFMQAPSQVHLGVAKRTLRYIKGTADYGIWFKREEQGQ----LMGYSDSDWAGSVDDMKSTSGYAFT--LGSGMFSWNSKKQEVVAQSSAEAEYIAAAGATNQALWLRKIL 378          
BLAST of mRNA_S-ischiensis_contig14.3369.1 vs. uniprot
Match: UPI000B8F0685 (secreted RxLR effector protein 161-like n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F0685)

HSP 1 Score: 137 bits (344), Expect = 6.450e-36
Identity = 104/251 (41.43%), Postives = 142/251 (56.57%), Query Frame = 1
Query:    4 SRSIHVLDIYVNDLLITGSNPDAVEDMLKSMKAKFDTQDLGNATSVLGMEMHHNRDSKVLHLSQRKYADNILRRFGMEMCNSAPTPGDFDA--FHPVGKELLSSIDHGTYREIVRSLLCLCRLTRPDISCAVMQLSRVVSKP-----DALLRLERGAGSILKGTLSMGIKYVGKDVSSSGPVLEGYCDADYRGDLATRRSTTGYVYVYVLAQGPIVWDSKLQ-TIAQSSTESEYIGLASAGNEAVYLRELL 732
            S+ + VL +Y +DL+ITG +   +E + +++  +F  +D+G  +  LG+E+ +   + +LH  Q+KY  ++L RFGM  C    TP D  A      GKEL    D   YR+IV SL+ L  LTR DI+  V  LSR V  P     DA+ R+ R     +K TL  GIK+ G+        L GYCDADY GDL TRRSTT YV+   L +G I W SK Q TI+ S+TE+EY     A  E V+L+ LL
Sbjct:    5 SKLVVVL-VYEDDLIITGDDKKGIEQLKRNVCVRFHMKDIGRLSHFLGLEIKYEERALILH--QQKYCIDLLTRFGMLDCKPINTPMDVTAKLCADKGKELE---DPTMYRKIVGSLIYL-TLTRQDIAFEVGVLSRYVQNPRKPHLDAVRRVMR----YVKMTLGFGIKFDGEVKLD----LVGYCDADYAGDLDTRRSTTRYVFK--LGRGVITWCSKRQPTISLSTTEAEYRAATMAAQEIVWLQLLL 238          
BLAST of mRNA_S-ischiensis_contig14.3369.1 vs. uniprot
Match: A0A150FV84_GONPE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FV84_GONPE)

HSP 1 Score: 143 bits (360), Expect = 1.580e-35
Identity = 94/239 (39.33%), Postives = 140/239 (58.58%), Query Frame = 1
Query:   28 IYVNDLLITGSNPDAVEDMLKSMKAKFDTQDLGNATSVLGMEMHHNRDSKVLHLSQRKYADNILRRFGMEMCNSAPTPGDFDAFHPVGKELLSSIDHGT-YREIVRSLLCLCRLTRPDISCAVMQLSRVVSKPD-ALLRLERGAGSILKGTLSMGIKYVGKDVSSSGPVLEGYCDADYRGDLATRRSTTGYVYVYVLAQGPIVWDSKLQ-TIAQSSTESEYIGLASAGNEAVYLRELLA 735
            ++V+D LI G N DA   +L S+K KF+ ++L  AT  LG+E+ ++R    L +SQRKYA  +L RF M  CN    P    A      E     D  + +RE++ +L+ L   TRPDI+  V +L+R ++KP  A     +G    L+GT  +G+ + G       PV+  + D+D+ GDL TRRSTTG+V+V+  A   + W S+LQ T+A SS E+EY+  +SA  EA++L +LLA
Sbjct:  323 VHVDDFLIAGEN-DAEVRILASLKGKFEMRELDGATYFLGIEIAYDRGKGELRMSQRKYAMEVLERFEMADCNPRVVPMAPSAVLRRAGEKEEPFDEASRFRELIGALMYLAVYTRPDIAQGVYRLARYMAKPTKAHWEHAKGILRYLRGTCDLGLVFGG----DGKPVVTAFSDSDWAGDLDTRRSTTGFVFVFNGAA--VSWRSRLQPTVAASSVEAEYMAASSATREALWLEQLLA 554          
BLAST of mRNA_S-ischiensis_contig14.3369.1 vs. uniprot
Match: Q94EV3_MAIZE (Fourf gag/pol protein n=2 Tax=Zea mays TaxID=4577 RepID=Q94EV3_MAIZE)

HSP 1 Score: 144 bits (362), Expect = 1.900e-35
Identity = 97/241 (40.25%), Postives = 137/241 (56.85%), Query Frame = 1
Query:   19 VLDIYVNDLLITGSNPDAVEDMLKSMKAKFDTQDLGNATSVLGMEMHHNRDSKVLHLSQRKYADNILRRFGMEMCNSAPTPGDFDAFHPVGKELLSSIDHGTYREIVRSLLCLCRLTRPDISCAVMQLSRVVSKP--DALLRLERGAGSILKGTLSMGIKYVGKDVSSSGPVLEGYCDADYRGDLATRRSTTGYVYVYVLAQGPIVWDSKLQTIAQSST-ESEYIGLASAGNEAVYLRELL 732
            +L +YV+D+LI GSN + +E++   + + F+ +DLG A  +L +++    D  V  L Q  Y + +L RFG   C+ APTP  +D    + K    + D  TY +I+ SL+ L   TRPDIS AV +LSR VSKP  D    LER     LKGT++ GI Y G        VLEGYCDA++  D     +T+GYV+++    G + W S  QTI   ST E+E   L +AG EA +LR+ L
Sbjct:  959 MLCLYVDDILIFGSNLNVIEEVKNLLSSNFEMKDLGEADVILNIKLVRKADGGVT-LLQSHYVEKVLSRFGFSDCDPAPTP--YDPSVLLRKNRRIARDQLTYSQIIGSLMYLASATRPDISYAVSKLSRFVSKPGDDHWCALERVL-RYLKGTMTYGIHYTGNP-----KVLEGYCDANWISDADELYATSGYVFLF--GGGAVSWKSCKQTILTKSTMEAELAALDTAGAEAEWLRDFL 1188          
BLAST of mRNA_S-ischiensis_contig14.3369.1 vs. uniprot
Match: Q9LH44_ARATH (Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9LH44_ARATH)

HSP 1 Score: 144 bits (362), Expect = 1.940e-35
Identity = 95/249 (38.15%), Postives = 146/249 (58.63%), Query Frame = 1
Query:    4 SRSIHVLDIYVNDLLITGSNPDAVEDMLKSMKAKFDTQDLGNATSVLGMEMHHNRDSKVLHLSQRKYADNILRRFGMEMCNSAPTPGDFDAFHPVGK--ELLSSI--DHGTYREIVRSLLCLCRLTRPDISCAVMQLSRVVSKP-DALLRLERGAGSILKGTLSMGIKYVGKDVSSSGPVLEGYCDADYRGDLATRRSTTGYVYVYVLAQGPIVWDS-KLQTIAQSSTESEYIGLASAGNEAVYLRELL 732
            S+ I V+ +YV+D+++TGSN   +E   + MK +F+  DLG  +  LGME+  N+D + + LSQ  YA  +L++FGM+ C S  TP       P GK  E+LS    D   YR ++  +L LC  +RPDI  A   LSR +  P    L+  +     +KGTL+ GI +  K V    P L G+ D+D+ G +  ++ST+GYV+   +  G   W+S K +T+AQS+ E+EYI + SA N+A++L+ L+
Sbjct: 1025 SKEILVVSLYVDDIIVTGSNVKEIERFKEEMKNEFEMTDLGELSYFLGMEV--NQDDEGIFLSQENYAKKLLKKFGMQECKSVSTP-----LTPHGKIEEVLSEKLEDVTMYRSMIGGMLYLCA-SRPDIMYASSYLSRYMRSPLKQHLQEAKRVLRYVKGTLTYGIHF--KRVEK--PELVGFSDSDWAGSVEDKKSTSGYVFT--IGSGAFCWNSSKQKTVAQSTAEAEYIAVCSAANQAIWLQRLV 1259          
BLAST of mRNA_S-ischiensis_contig14.3369.1 vs. uniprot
Match: A0A438CPW6_VITVI (Putative disease resistance RPP13-like protein 1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CPW6_VITVI)

HSP 1 Score: 142 bits (359), Expect = 5.160e-35
Identity = 91/242 (37.60%), Postives = 142/242 (58.68%), Query Frame = 1
Query:   19 VLDIYVNDLLITGSNPDAVEDMLKSMKAKFDTQDLGNATSVLGMEMHHNRDSKVLHLSQRKYADNILRRFGMEMCNSAPTPGDFDAFHPVGKELLSSIDH-GTYREIVRSLLCLCRLTRPDISCAVMQLSRVVSKPDAL-LRLERGAGSILKGTLSMGIKYVGKDVSSSGPVLEGYCDADYRGDLATRRSTTGYVYVYVLAQGPIVWDSKLQ-TIAQSSTESEYIGLASAGNEAVYLRELLA 735
            V+ +YV+D+L+TGSN   + D    M+  F+  DLG     LGME++  + S  + +SQRKYA +IL++F +E C    TP        + K     ++    YR +V SLL L  +TRPD+      LSR +S P  + +R+ +     +KGT ++GI Y+     + G  L+GY D+D+ G +   +ST+GY +   +  G I W+S+ Q  +AQS+TE+EYI LA+A N+A++LR+LLA
Sbjct: 2223 VVSLYVDDMLVTGSNVKLLADFKMEMQDVFEMSDLGIMNYFLGMEIY--QCSWGIFISQRKYAMDILKKFKLESCKEVATP--LAQNEKISKNDGEKLEEPSAYRSLVGSLLYL-TVTRPDLMFPASLLSRFMSSPSNVHMRVAKRVLKYVKGTTNLGIWYL----KTGGVKLDGYADSDWAGSVDDMKSTSGYAFT--IGSGVICWNSRKQEVVAQSTTEAEYISLAAAANQAIWLRKLLA 2453          
BLAST of mRNA_S-ischiensis_contig14.3369.1 vs. uniprot
Match: A0A1J3DEI6_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3DEI6_NOCCA)

HSP 1 Score: 140 bits (353), Expect = 5.390e-35
Identity = 94/249 (37.75%), Postives = 141/249 (56.63%), Query Frame = 1
Query:   19 VLDIYVNDLLITGSNPDAVEDMLKSMKAKFDTQDLGNATSVLGMEMHHNRDSKVLHLSQRKYADNILRRFGMEMCNSAPTP--GDFD---AFHPVGKELLSSIDHGTYREIVRSLLCLCRLTRPDISCAVMQLSRVVSKP-----DALLRLERGAGSILKGTLSMGIKYVGKDVSSSGPVLEGYCDADYRGDLATRRSTTGYVYVYVLAQGPIVWDSKLQTI-AQSSTESEYIGLASAGNEAVYLRELL 732
            +L +YV+D+LI GSN D + ++ + +  +F+ +DLG A  +LGME+   R SK L LSQ+ Y   +L RF M       TP    F+   A  P   E +  ++   Y   V  L+     TRPD++ AV Q+S+ +SKP     +A+  + R     LKGT   G+ + G++  S    + G+ D+DY GDL  RRSTTG+V+   LA G I W S LQTI A S+TE+EY+ +  A  EA++++ L+
Sbjct:  197 ILLLYVDDMLIAGSNMDDIVELKRLLGREFEMKDLGAAKKILGMEIRRERSSKRLWLSQKAYIQKVLERFDMSGAKPVSTPLANHFNLETAQSPKTGEEIKDMEQVPYASAVGCLMYAMVCTRPDLAQAVSQVSKYMSKPGREHWNAVKWVLR----YLKGTAEDGLMFGGQECGS----VVGFVDSDYAGDLDNRRSTTGFVFT--LAGGAICWRSVLQTIVAMSTTEAEYMAMGEAAKEALWVQGLV 435          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig14.3369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5N6P6T5_9ASTR3.990e-4043.43Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A6H5LCH2_9PHAE5.680e-3736.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A094G7N8_9PEZI2.280e-3637.92Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0V0IN51_SOLCH5.690e-3637.90Putative ovule protein n=1 Tax=Solanum chacoense T... [more]
UPI000B8F06856.450e-3641.43secreted RxLR effector protein 161-like n=1 Tax=He... [more]
A0A150FV84_GONPE1.580e-3539.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q94EV3_MAIZE1.900e-3540.25Fourf gag/pol protein n=2 Tax=Zea mays TaxID=4577 ... [more]
Q9LH44_ARATH1.940e-3538.15Copia-like retrotransposable element n=1 Tax=Arabi... [more]
A0A438CPW6_VITVI5.160e-3537.60Putative disease resistance RPP13-like protein 1 n... [more]
A0A1J3DEI6_NOCCA5.390e-3537.75Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig14contigS-ischiensis_contig14:2240084..2240911 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score148.7
Seed ortholog evalue3.7e-33
Seed eggNOG ortholog15368.BRADI1G51145.1
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs37V5Q@33090,3GFFK@35493,3IKJW@38820,3M7B5@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size750
Cds size750
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815724.3529754-CDS-S-ischiensis_contig14:2240083..22403711622815724.3529754-CDS-S-ischiensis_contig14:2240083..2240371Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 2240084..2240371 -
1695739876.8120983-CDS-S-ischiensis_contig14:2240083..22403711695739876.8120983-CDS-S-ischiensis_contig14:2240083..2240371Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 2240084..2240371 -
1622815724.3629415-CDS-S-ischiensis_contig14:2240449..22409111622815724.3629415-CDS-S-ischiensis_contig14:2240449..2240911Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 2240450..2240911 -
1695739876.8242915-CDS-S-ischiensis_contig14:2240449..22409111695739876.8242915-CDS-S-ischiensis_contig14:2240449..2240911Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 2240450..2240911 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig14.3369.1prot_S-ischiensis_contig14.3369.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig14 2240084..2240911 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig14.3369.1

>prot_S-ischiensis_contig14.3369.1 ID=prot_S-ischiensis_contig14.3369.1|Name=mRNA_S-ischiensis_contig14.3369.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=250bp
ESRSIHVLDIYVNDLLITGSNPDAVEDMLKSMKAKFDTQDLGNATSVLGM
EMHHNRDSKVLHLSQRKYADNILRRFGMEMCNSAPTPGDFDAFHPVGKEL
LSSIDHGTYREIVRSLLCLCRLTRPDISCAVMQLSRVVSKPDALLRLERG
AGSILKGTLSMGIKYVGKDVSSSGPVLEGYCDADYRGDLATRRSTTGYVY
VYVLAQGPIVWDSKLQTIAQSSTESEYIGLASAGNEAVYLRELLASRLY*
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mRNA from alignment at S-ischiensis_contig14:2240084..2240911-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig14.3369.1 ID=mRNA_S-ischiensis_contig14.3369.1|Name=mRNA_S-ischiensis_contig14.3369.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=828bp|location=Sequence derived from alignment at S-ischiensis_contig14:2240084..2240911- (Schizocladia ischiensis KU_0333)
GAGTCTAGATCTATTCATGTCTTAGATATCTACGTGAACGATCTACTGAT CACAGGCTCAAATCCAGATGCTGTGGAAGATATGCTCAAATCTATGAAAG CTAAGTTTGACACCCAGGATCTAGGGAATGCTACTTCTGTGCTAGGCATG GAGATGCACCACAACAGAGACAGTAAGGTCCTCCACCTTAGCCAGAGAAA GTACGCAGACAATATTCTCCGCAGATTTGGTATGGAGATGTGCAACAGTG CCCCTACCCCTGGTGATTTCGATGCATTTCATCCAGTAGGCAAGGAGCTG TTATCCTCCATTGACCATGGCACCTACCGGGAAATAGTTCGATCCTTGCT ATGTTTGTGCCGGCTCACAAGGCCAGACATTTCATGCGCCGTGATGCAAC TCTCCCGAGTGGTTTCTAAACCTGATGCCCTGCTCCGTCTCGAACGAGGC GCGGGGTCAATTGTCTCGGGACTACGGCAAGCACCACGTGAATACATATA TGGCATACACATGGCTGCTGCAAGGCGCCTACTTAGATAGTTAAAAGGCA CCCTCTCTATGGGTATCAAGTATGTGGGCAAGGATGTATCTTCTTCAGGC CCAGTGCTGGAAGGCTACTGTGATGCAGATTATAGGGGTGACCTTGCTAC TCGAAGGAGTACAACTGGCTACGTATACGTATACGTTCTAGCCCAAGGCC CCATCGTATGGGATTCCAAATTGCAGACCATAGCGCAGAGCTCCACCGAA TCGGAGTACATAGGCTTAGCCTCCGCAGGAAATGAAGCCGTATACCTGCG CGAACTGCTTGCTTCTCGCTTGTACTGA
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Coding sequence (CDS) from alignment at S-ischiensis_contig14:2240084..2240911-

>mRNA_S-ischiensis_contig14.3369.1 ID=mRNA_S-ischiensis_contig14.3369.1|Name=mRNA_S-ischiensis_contig14.3369.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1500bp|location=Sequence derived from alignment at S-ischiensis_contig14:2240084..2240911- (Schizocladia ischiensis KU_0333)
GAGTCTAGATCTATTCATGTCTTAGATATCTACGTGAACGATCTACTGAT
CACAGGCTCAAATCCAGATGCTGTGGAAGATATGCTCAAATCTATGAAAG
CTAAGTTTGACACCCAGGATCTAGGGAATGCTACTTCTGTGCTAGGCATG
GAGATGCACCACAACAGAGACAGTAAGGTCCTCCACCTTAGCCAGAGAAA
GTACGCAGACAATATTCTCCGCAGATTTGGTATGGAGATGTGCAACAGTG
CCCCTACCCCTGGTGATTTCGATGCATTTCATCCAGTAGGCAAGGAGCTG
TTATCCTCCATTGACCATGGCACCTACCGGGAAATAGTTCGATCCTTGCT
ATGTTTGTGCCGGCTCACAAGGCCAGACATTTCATGCGCCGTGATGCAAC
TCTCCCGAGTGGTTTCTAAACCTGATGCCCTGCTCCGTCTCGAACGAGGC
GCGGGGTCAATTGAGTCTAGATCTATTCATGTCTTAGATATCTACGTGAA
CGATCTACTGATCACAGGCTCAAATCCAGATGCTGTGGAAGATATGCTCA
AATCTATGAAAGCTAAGTTTGACACCCAGGATCTAGGGAATGCTACTTCT
GTGCTAGGCATGGAGATGCACCACAACAGAGACAGTAAGGTCCTCCACCT
TAGCCAGAGAAAGTACGCAGACAATATTCTCCGCAGATTTGGTATGGAGA
TGTGCAACAGTGCCCCTACCCCTGGTGATTTCGATGCATTTCATCCAGTA
GGCAAGGAGCTGTTATCCTCCATTGACCATGGCACCTACCGGGAAATAGT
TCGATCCTTGCTATGTTTGTGCCGGCTCACAAGGCCAGACATTTCATGCG
CCGTGATGCAACTCTCCCGAGTGGTTTCTAAACCTGATGCCCTGCTCCGT
CTCGAACGAGGCGCGGGGTCAATTTTAAAAGGCACCCTCTCTATGGGTAT
CAAGTATGTGGGCAAGGATGTATCTTCTTCAGGCCCAGTGCTGGAAGGCT
ACTGTGATGCAGATTATAGGGGTGACCTTGCTACTCGAAGGAGTACAACT
GGCTACGTATACGTATACGTTCTAGCCCAAGGCCCCATCGTATGGGATTC
CAAATTGCAGACCATAGCGCAGAGCTCCACCGAATCGGAGTACATAGGCT
TAGCCTCCGCAGGAAATGAAGCCGTATACCTGCGCGAACTGCTTGCTTCT
CGCTTGTACTGATTAAAAGGCACCCTCTCTATGGGTATCAAGTATGTGGG
CAAGGATGTATCTTCTTCAGGCCCAGTGCTGGAAGGCTACTGTGATGCAG
ATTATAGGGGTGACCTTGCTACTCGAAGGAGTACAACTGGCTACGTATAC
GTATACGTTCTAGCCCAAGGCCCCATCGTATGGGATTCCAAATTGCAGAC
CATAGCGCAGAGCTCCACCGAATCGGAGTACATAGGCTTAGCCTCCGCAG
GAAATGAAGCCGTATACCTGCGCGAACTGCTTGCTTCTCGCTTGTACTGA
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