mRNA_S-ischiensis_contig14.3364.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig14.3364.1 vs. uniprot
Match: A0A4P9XH67_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XH67_9FUNG) HSP 1 Score: 136 bits (343), Expect = 3.890e-37 Identity = 67/124 (54.03%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 232 VSLRPPK------VAYSGQSPWIQSGTIRDNVLFGRGMRRGRYREVLEACALLPDLRALPRGDLTRVGDRGATLSGGQRARVSLARCAYADADLYLLDDPLSALDPETRASVSARCILGILRDR 585
V R PK +AY+ QS WI SGT+RDN+LFG R R VL+ACAL DLRALP GD+T +G+RG TLSGGQ+AR+S+AR Y+ ADLY+ DDPLSA+DP + + G+L+DR
Sbjct: 7 VRARSPKANETQHIAYAAQSAWILSGTVRDNILFGNAYNAKRMRAVLDACALEEDLRALPHGDMTFIGERGITLSGGQKARISIARAVYSQADLYIFDDPLSAVDPHVAQYLFQHVVCGLLKDR 130
BLAST of mRNA_S-ischiensis_contig14.3364.1 vs. uniprot
Match: UPI0008741688 (multidrug resistance-associated protein 4-like isoform X2 n=1 Tax=Lates calcarifer TaxID=8187 RepID=UPI0008741688) HSP 1 Score: 135 bits (340), Expect = 6.830e-36 Identity = 63/112 (56.25%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 250 KVAYSGQSPWIQSGTIRDNVLFGRGMRRGRYREVLEACALLPDLRALPRGDLTRVGDRGATLSGGQRARVSLARCAYADADLYLLDDPLSALDPETRASVSARCILGILRDR 585
++ Y+ Q PW+ GTIR N+LFGR + RY V+ ACAL DL LP GDLT +GDRGATLSGGQ+AR++LAR Y +AD+YLLDDPLSA+D E + +CI G+LR++
Sbjct: 80 QLTYASQQPWVFPGTIRSNILFGRELNLQRYERVIRACALKKDLELLPYGDLTLIGDRGATLSGGQKARLNLARAVYQEADIYLLDDPLSAVDAEVGKHLFEQCICGLLRNK 191
BLAST of mRNA_S-ischiensis_contig14.3364.1 vs. uniprot
Match: UPI001C2CD718 (ATP-binding cassette sub-family C member 4 n=1 Tax=Haplochromis burtoni TaxID=8153 RepID=UPI001C2CD718) HSP 1 Score: 135 bits (341), Expect = 6.990e-36 Identity = 63/112 (56.25%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 250 KVAYSGQSPWIQSGTIRDNVLFGRGMRRGRYREVLEACALLPDLRALPRGDLTRVGDRGATLSGGQRARVSLARCAYADADLYLLDDPLSALDPETRASVSARCILGILRDR 585
++ Y+ Q PW+ GTIR N+LFGR + +Y +VL ACAL DL P GDLT +GDRGATLSGGQ+ARV+LAR Y DAD+YLLDDPLSA+D E + +CI G+L+++
Sbjct: 69 QLTYASQQPWVFPGTIRSNILFGRELNPKKYEQVLRACALKKDLEMFPDGDLTLIGDRGATLSGGQKARVNLARAVYEDADIYLLDDPLSAVDAEVGKHLFDKCICGLLKNK 180
BLAST of mRNA_S-ischiensis_contig14.3364.1 vs. uniprot
Match: Q4SEF2_TETNG ((spotted green pufferfish) hypothetical protein n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4SEF2_TETNG) HSP 1 Score: 144 bits (362), Expect = 7.060e-36 Identity = 69/112 (61.61%), Postives = 84/112 (75.00%), Query Frame = 1
Query: 250 KVAYSGQSPWIQSGTIRDNVLFGRGMRRGRYREVLEACALLPDLRALPRGDLTRVGDRGATLSGGQRARVSLARCAYADADLYLLDDPLSALDPETRASVSARCILGILRDR 585
+V Y+ Q PW+ GTI+ N+LFGR M GRY VLEACAL DL LP GDLT +GDRGATLSGGQRARV+LAR Y DAD+YLLDDPLSA+D E + +C+ G+L+D+
Sbjct: 532 QVTYAAQQPWVFPGTIQSNILFGREMIPGRYETVLEACALKRDLDLLPSGDLTLIGDRGATLSGGQRARVNLARAVYQDADIYLLDDPLSAVDAEVGKHLFEQCVCGLLKDK 643
BLAST of mRNA_S-ischiensis_contig14.3364.1 vs. uniprot
Match: A0A6J0C746_NEOLC (probable multidrug resistance-associated protein lethal(2)03659 n=16 Tax=Neodiprion TaxID=270857 RepID=A0A6J0C746_NEOLC) HSP 1 Score: 141 bits (356), Expect = 4.610e-35 Identity = 67/118 (56.78%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 232 VSLRPPKVAYSGQSPWIQSGTIRDNVLFGRGMRRGRYREVLEACALLPDLRALPRGDLTRVGDRGATLSGGQRARVSLARCAYADADLYLLDDPLSALDPETRASVSARCILGILRDR 585
+S R +++YSGQ PW+ S ++RDN+LFG+ RY+EV EACAL D LP GDL+ VG+RGA+LSGGQRARV+LAR Y DADLYLLDDPLSA+D + + +CI G L+D+
Sbjct: 538 ISSRDIRISYSGQDPWLFSASVRDNILFGQPYDEERYQEVTEACALAKDFEQLPHGDLSLVGERGASLSGGQRARVNLARAVYRDADLYLLDDPLSAVDTQVSRHLFNKCIKGFLKDK 655
BLAST of mRNA_S-ischiensis_contig14.3364.1 vs. uniprot
Match: A0A4Z2BRL4_9TELE (Uncharacterized protein n=1 Tax=Takifugu bimaculatus TaxID=433685 RepID=A0A4Z2BRL4_9TELE) HSP 1 Score: 140 bits (352), Expect = 8.310e-35 Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = 1
Query: 250 KVAYSGQSPWIQSGTIRDNVLFGRGMRRGRYREVLEACALLPDLRALPRGDLTRVGDRGATLSGGQRARVSLARCAYADADLYLLDDPLSALDPETRASVSARCILGILRDR 585
+V Y+ Q PW+ GTIR N+LFGR + +Y VL+ACAL DL LP GDLT +GDRGATLSGGQ+ARV+LAR Y DAD+YLLDDPLSA+D E + +CI G+L+D+
Sbjct: 477 RVTYAAQQPWVFPGTIRSNILFGRELNPNKYETVLKACALKRDLDLLPSGDLTLIGDRGATLSGGQKARVNLARAVYEDADIYLLDDPLSAVDAEVGKHLFEQCICGLLKDK 588
BLAST of mRNA_S-ischiensis_contig14.3364.1 vs. uniprot
Match: UPI002025DA27 (ATP-binding cassette sub-family C member 4 isoform X1 n=2 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002025DA27) HSP 1 Score: 140 bits (354), Expect = 8.500e-35 Identity = 66/112 (58.93%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 250 KVAYSGQSPWIQSGTIRDNVLFGRGMRRGRYREVLEACALLPDLRALPRGDLTRVGDRGATLSGGQRARVSLARCAYADADLYLLDDPLSALDPETRASVSARCILGILRDR 585
K+AY Q PW+ SGT+R+N+LFG+ +G Y +VL ACAL DL LP GDLT +GDRGATLSGGQ+ARV+LAR Y DAD+YLLDDPLSA+D E + +CI LR +
Sbjct: 481 KIAYVSQQPWVFSGTVRENILFGKAYEKGNYEKVLRACALKKDLELLPDGDLTVIGDRGATLSGGQKARVNLARAVYQDADIYLLDDPLSAVDAEVSRHLFEKCICQALRKK 592
BLAST of mRNA_S-ischiensis_contig14.3364.1 vs. uniprot
Match: UPI001601479E (multidrug resistance-associated protein 4-like isoform X1 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001601479E) HSP 1 Score: 140 bits (354), Expect = 8.510e-35 Identity = 66/112 (58.93%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 250 KVAYSGQSPWIQSGTIRDNVLFGRGMRRGRYREVLEACALLPDLRALPRGDLTRVGDRGATLSGGQRARVSLARCAYADADLYLLDDPLSALDPETRASVSARCILGILRDR 585
KV Y+ Q PW+ SGT+R N+LFGR + YR+ ++ACAL DL LP GD+T VGDRG TLSGGQ+AR++LAR Y DAD+YLLDDPLSA+D E + RCI G LRD+
Sbjct: 481 KVGYASQQPWVFSGTVRQNILFGRPYKEEDYRKTIQACALKKDLELLPHGDMTLVGDRGVTLSGGQKARINLARAVYHDADVYLLDDPLSAVDAEVGRHLFNRCIQGALRDK 592
BLAST of mRNA_S-ischiensis_contig14.3364.1 vs. uniprot
Match: A0A3Q2QRM3_FUNHE (Multidrug resistance-associated protein 4 n=2 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2QRM3_FUNHE) HSP 1 Score: 140 bits (352), Expect = 1.560e-34 Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = 1
Query: 250 KVAYSGQSPWIQSGTIRDNVLFGRGMRRGRYREVLEACALLPDLRALPRGDLTRVGDRGATLSGGQRARVSLARCAYADADLYLLDDPLSALDPETRASVSARCILGILRDR 585
++ Y+ Q PW+ GTIR N+LFGR M R +Y VL ACAL DL LP GDLT +GDRGATLSGGQ+AR++LAR Y DAD+YLLDDPLSA+D E + +CI G+L+++
Sbjct: 476 QLTYASQQPWVFPGTIRSNILFGREMNRKKYERVLRACALKKDLELLPDGDLTLIGDRGATLSGGQKARINLARAVYQDADIYLLDDPLSAVDAEVGKHLFEQCICGLLKNK 587
BLAST of mRNA_S-ischiensis_contig14.3364.1 vs. uniprot
Match: B3RTE6_TRIAD (Uncharacterized protein (Fragment) n=2 Tax=Trichoplax TaxID=10227 RepID=B3RTE6_TRIAD) HSP 1 Score: 140 bits (352), Expect = 1.570e-34 Identity = 62/112 (55.36%), Postives = 85/112 (75.89%), Query Frame = 1
Query: 250 KVAYSGQSPWIQSGTIRDNVLFGRGMRRGRYREVLEACALLPDLRALPRGDLTRVGDRGATLSGGQRARVSLARCAYADADLYLLDDPLSALDPETRASVSARCILGILRDR 585
K+ Y+ Q PW+ SGT++DN+LFG + +Y +VLEACAL DL++LP DLT VG+RG LSGGQ+AR+SLAR AY DAD+Y++DDPLSA+D + + +CI G+L+DR
Sbjct: 446 KIGYASQQPWVFSGTVKDNILFGSEYKEDKYIKVLEACALTKDLQSLPHNDLTYVGERGVRLSGGQKARISLARAAYCDADIYIMDDPLSAVDVDVAQHLFTKCICGLLKDR 557 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig14.3364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig14.3364.1 >prot_S-ischiensis_contig14.3364.1 ID=prot_S-ischiensis_contig14.3364.1|Name=mRNA_S-ischiensis_contig14.3364.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=168bp MIIRTPAVKGLRLYGPSIIVTCCFAVSLRPPKVAYSGQSPWIQSGTIRDNback to top mRNA from alignment at S-ischiensis_contig14:2217603..2219538+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig14.3364.1 ID=mRNA_S-ischiensis_contig14.3364.1|Name=mRNA_S-ischiensis_contig14.3364.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1936bp|location=Sequence derived from alignment at S-ischiensis_contig14:2217603..2219538+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig14:2217603..2219538+ >mRNA_S-ischiensis_contig14.3364.1 ID=mRNA_S-ischiensis_contig14.3364.1|Name=mRNA_S-ischiensis_contig14.3364.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1008bp|location=Sequence derived from alignment at S-ischiensis_contig14:2217603..2219538+ (Schizocladia ischiensis KU_0333)back to top |