mRNA_S-ischiensis_contig14.3327.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig14.3327.1
Unique NamemRNA_S-ischiensis_contig14.3327.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig14.3327.1 vs. uniprot
Match: D8LFC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC9_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 4.770e-112
Identity = 171/267 (64.04%), Postives = 213/267 (79.78%), Query Frame = 1
Query:   43 RKWTQDGTRYPALPGVAITYVNGIFHNRTDWEQLSSQLQQIFGHEVRAFYNPTSGWWIADASRAGYHLVRKPNDDSVAQALAEHLAAAVSDVGPKGRVLHLAHSGGALLTYLAAKYHLSPEQAAQIDVVTFGGARSLTRKYFSGRAVNYYARNDPLVHLDRRANSVMKSTRNTKYEQ-----------VVAKHNTTFVFLEGKARHAIRDHSLEGPTYMRALRSEAKAFRRRHFGPLSPMTWGYESSLLRVIRKKAAEATGVHDFFT 810
            R  + DG R+PA  GV ITY+NGIFH+  +WE ++ QLQ +FGHEVR+FYNP+SGWWI DAS+AGYH++RKP + ++AQAL +HLA AV DVG +GRVLH+AHSGGAL+TYLAA++HL+  Q  +IDVVTFGGARS+TRKYFSGR VNYYARNDPLV LDRRA  +MK T NTK+++           +  KHNTTFVFLEG+AR  + DHSLEGPTY  AL  EAKAFRR HFGPLSP++W Y+ S+LR++RKK A+ +G+HDFF+
Sbjct:   33 RHSSTDGRRWPANDGVVITYINGIFHSVPEWESITQQLQALFGHEVRSFYNPSSGWWITDASKAGYHMLRKPANHTIAQALGDHLAQAVEDVG-RGRVLHIAHSGGALITYLAAQHHLTRRQRDKIDVVTFGGARSITRKYFSGRVVNYYARNDPLVKLDRRAAELMKLTNNTKFQEGARRTKNGIWKINEKHNTTFVFLEGRARQFVLDHSLEGPTYQHALMKEAKAFRRAHFGPLSPLSWDYDQSILRLVRKKVAQLSGLHDFFS 298          
BLAST of mRNA_S-ischiensis_contig14.3327.1 vs. uniprot
Match: A0A6H5K5Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Y0_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 1.780e-102
Identity = 168/306 (54.90%), Postives = 211/306 (68.95%), Query Frame = 1
Query:   43 RKWTQDGTRYPALPGVAITYVNGIFHNRTDWEQLSSQLQQIFGHEVRAFYNPTSGWWIADASRAGYHLVRKPNDDSVAQALAEHLAAAVSDVGPKGRVLHLAHSGGALLTYLAAKYHLSPEQAAQIDVVTFGGARSLTRKYFSGRA------------------------------------VNYYARNDPLVHLDRRANSVMKSTRNTKYEQVVAKHNTTFVFLEGKARHAIRDHSLEGPTYMRALRSEAKAFRRR--------------HFGPLSPMTWGYESSLLRVIRKKAAEATGVHDFFT 810
            R  + DG R+PA  GV ITY+NGIFH+  +WE ++ QLQ +FGHEVR+FYNP+SGWWI DAS+AGYH++RKP + ++AQAL +HLA AV DVG +GRVLH+AHSGGAL+TYLAA++HL+  Q  +IDVVTFGGARS+TRKYFSGR                                     VNYYARNDPLV LDRRA  +MK T NTK++++  KHNTTFVFLEG+AR  + DHSLEGPTY  AL  EAK  +R               HFGPLSP++W Y+ S+LR++RKK A+ +G+HDFF+
Sbjct:   28 RHSSTDGRRWPANDGVVITYINGIFHSVPEWESITQQLQALFGHEVRSFYNPSSGWWITDASKAGYHMLRKPANHTIAQALGDHLAQAVEDVG-RGRVLHIAHSGGALITYLAAQHHLTRRQRDKIDVVTFGGARSITRKYFSGRVGEAASLLFLTLILGCSLTPVLLFLLLTHRRLLVLFPVNYYARNDPLVKLDRRAAELMKLTNNTKFQEINEKHNTTFVFLEGRARQFVLDHSLEGPTYQHALMKEAKGKKREDLGVQRTVCWGEWAHFGPLSPLSWDYDQSILRLVRKKVAQLSGLHDFFS 332          
BLAST of mRNA_S-ischiensis_contig14.3327.1 vs. uniprot
Match: A0A836CL88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL88_9STRA)

HSP 1 Score: 299 bits (765), Expect = 7.370e-91
Identity = 161/292 (55.14%), Postives = 197/292 (67.47%), Query Frame = 1
Query:    4 GYGWCSLDWGWDGRKWTQDGTRYPA-----LPGVA-----------ITYVNGIFHNRTDWEQLSSQLQQIFGHEVRAFYNPTSGWWIADASRAGYHLVRKPNDDSVAQALAEHLAAAVSDVGPKGRVLHLAHSGGALLTYLAAKYHLSPEQAAQIDVVTFGGARSLTRKYFSGRAVNYYARNDPLVHLDRRANSVMKSTRNTKYEQVV-AKHNTTFVFLEGKARHAIRDHSLEGPTYMRALRSEAKAFRRRHFGPLSPMTW-GYESSLLRVIRKKAAEATGVHDFFTDWPGV 825
            GYGW +L+W W     T   +   A     LPG             IT+VNGIFH+  DW++++ QL  IF  EVRAFYNP++GWW+AD + AG+ LVR+ +  SVA+ALA HL  A+   GP+GRVLHLAHSGGAL+TYLAAKYHL   + A+IDVVTFGGARS+TRKYFSGR VNYYARNDPLV LDRRA S+MK   N  Y++VV AKHNTTFVF+EG  R    DHSLEGPTY  AL  EA+    R     SP+    Y +S +R  RK+AA ATG+H F+ +  G+
Sbjct:   23 GYGWSTLEWQWPTVNTTTIASYINANITTLLPGTTPVPPPVPSRQIITFVNGIFHSEEDWQRITEQLDDIFKQEVRAFYNPSTGWWVADLAGAGFDLVRRSDTHSVARALALHLREALELSGPRGRVLHLAHSGGALMTYLAAKYHLRAAERARIDVVTFGGARSITRKYFSGRTVNYYARNDPLVILDRRAASLMKGAANETYQEVVYAKHNTTFVFMEGMTRSPFMDHSLEGPTYKIALEIEARNLLDRARESPSPLPGQAYATSWVRAARKRAAAATGLHSFWDETLGL 314          
BLAST of mRNA_S-ischiensis_contig14.3327.1 vs. uniprot
Match: A0A482SJI3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJI3_9ARCH)

HSP 1 Score: 264 bits (675), Expect = 5.490e-82
Identity = 130/246 (52.85%), Postives = 175/246 (71.14%), Query Frame = 1
Query:   82 PGVAITYVNGIFHNRTDWEQLSSQLQQIFGHEVRAFYNPTSGWWIADASRAGYHLVRKPNDDSVAQALAEHLAAAVSDVGPKGRVLHLAHSGGALLTYLAAKYHLSPEQAAQIDVVTFGGARSLTRKYFSGRAVNYYARNDPLVHLDRRANSVMKSTRNTKYEQVVA-KHNTTFVFLEGKARHAIRDHSLEGPTYMRALRSEAKAFRRRHFGPLSPMTWGYESSLLRVIRKKAAEATGVHDFFTDW 816
            P   IT+VNGI+H+  DW  +S+ + ++F  EVR FYNP+SG W+ DA+RAG  LV +P+D  +A+ LA HL  A++DV PKGRVLHLAHSGGA+LTYLAAK+HL+ ++ ++ID+VTFG  +S+TRKYF GR  NYYARNDPL  +D+R N ++K  RN  Y ++   KHNTTFVFL  +A H I DHS+ GPTY  A+  EA+ F+ R    +  M    E  ++R++RK+AA ATG H F+ DW
Sbjct:   81 PATIITFVNGIYHSIDDWRNISADISELFNAEVRPFYNPSSGVWVKDATRAGIDLVMRPSDQDLAKGLANHLRLALNDVEPKGRVLHLAHSGGAILTYLAAKHHLTTQETSRIDIVTFGAGKSITRKYFKGRVYNYYARNDPLTIVDKRTNQLIKRVRNHTYHEIRDHKHNTTFVFLAPQANHPIVDHSMLGPTYRYAMALEAEQFKDRL--KMFLMLKAKEKDVIRLLRKQAANATGFHHFW-DW 323          
BLAST of mRNA_S-ischiensis_contig14.3327.1 vs. uniprot
Match: K8YTC9_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YTC9_NANGC)

HSP 1 Score: 246 bits (628), Expect = 3.910e-75
Identity = 128/277 (46.21%), Postives = 179/277 (64.62%), Query Frame = 1
Query:   43 RKWTQDGTRY--PAL-PGVAITYVNGIFHNRTDWEQLSSQLQQIFGHEVRAFYNPTSGWWIADASRAGYHLVRKPNDDSVAQALAEHLAAAVSDVGPKGRVLHLAHSGGALLTYLAAKYHLSPEQAAQIDVVTFGGARSLTRKYFSGRAVNYYARNDPLVHLDRRANSVMKSTRNTKY--EQVVAKHNTTFVFLEGKARHAIRDHSLEGPTYMRALRSEAKAFRRRHFGPL--------SPMTWGYESSLLRVIRKKAAEATGVHDFFTDWPGVRRF 834
            ++W +D  R+  P+L P +A+T+VNGI +   + E+ +  L  +FG  VR +YNP+ GWW+ D +R  Y  +R P +D V   LA HL+  + +VGPKGRV+HLAHSGGALLTYL AKYHL      +IDV+ FGGARS+T+KYF G+A NYYARNDP++ ++RRA ++M+   N     E +  KHNT+FVFL+G+A  A+ DHS  GPTY+ AL  EA  FRR ++ P          P   G+     R +RK+ A ATG H++F++   VR +
Sbjct:   51 KEWVRDTWRWGEPSLNPSIALTWVNGINYTNEEMEEQARFLSSLFGCRVRPYYNPSLGWWLRDLTRVSYMYIRSPTEDPVVTGLARHLSRVLLEVGPKGRVIHLAHSGGALLTYLVAKYHLKETDRRRIDVLNFGGARSITQKYF-GKATNYYARNDPILLVNRRAMNLMQQLLNESADGEVIYLKHNTSFVFLQGRAGDALTDHSFIGPTYLMALNKEAAVFRRSYYRPYWLDGLIIAKPPDMGWA----RFVRKRVAAATGFHNYFSNSTLVRLY 322          
BLAST of mRNA_S-ischiensis_contig14.3327.1 vs. uniprot
Match: W7U1H3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1H3_9STRA)

HSP 1 Score: 246 bits (628), Expect = 3.880e-70
Identity = 128/277 (46.21%), Postives = 179/277 (64.62%), Query Frame = 1
Query:   43 RKWTQDGTRY--PAL-PGVAITYVNGIFHNRTDWEQLSSQLQQIFGHEVRAFYNPTSGWWIADASRAGYHLVRKPNDDSVAQALAEHLAAAVSDVGPKGRVLHLAHSGGALLTYLAAKYHLSPEQAAQIDVVTFGGARSLTRKYFSGRAVNYYARNDPLVHLDRRANSVMKSTRNTKY--EQVVAKHNTTFVFLEGKARHAIRDHSLEGPTYMRALRSEAKAFRRRHFGPL--------SPMTWGYESSLLRVIRKKAAEATGVHDFFTDWPGVRRF 834
            ++W +D  R+  P+L P +A+T+VNGI +   + E+ +  L  +FG  VR +YNP+ GWW+ D +R  Y  +R P +D V   LA HL+  + +VGPKGRV+HLAHSGGALLTYL AKYHL      +IDV+ FGGARS+T+KYF G+A NYYARNDP++ ++RRA ++M+   N     E +  KHNT+FVFL+G+A  A+ DHS  GPTY+ AL  EA  FRR ++ P          P   G+     R +RK+ A ATG H++F++   VR +
Sbjct:   51 KEWVRDTWRWGEPSLNPSIALTWVNGINYTNEEMEEQARFLSSLFGCRVRPYYNPSLGWWLRDLTRVSYMYIRSPTEDPVVTGLARHLSRVLLEVGPKGRVIHLAHSGGALLTYLVAKYHLKETDRRRIDVLNFGGARSITQKYF-GKATNYYARNDPILLVNRRAMNLMQQLLNESADGEVIYLKHNTSFVFLQGRAGDALTDHSFIGPTYLMALNKEAAVFRRSYYRPYWLDGLIIAKPPDMGWA----RFVRKRVAAATGFHNYFSNSTLVRLY 322          
BLAST of mRNA_S-ischiensis_contig14.3327.1 vs. uniprot
Match: A0A7S4PRT6_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PRT6_GUITH)

HSP 1 Score: 128 bits (321), Expect = 1.640e-29
Identity = 94/272 (34.56%), Postives = 136/272 (50.00%), Query Frame = 1
Query:   88 VAITYVNGIFHNRTDWEQLSSQLQQIFGHEVRAFYNPTSGWWIADASRAGYHLVRKPNDDSVAQALAEHLAAAVSDVGPKGRVLHLAHSGGALLTYLAAKYHLSPEQAAQIDVVTFGGARSLTRKYFSGRAVNYYARNDPLVHLDRRANSVMKST---------------RNTKYEQ------------------VVAKHNTTFVFLEGKA--RHAIRDHSLEGPTYMRALRSEAKAFRRRHFGPLSPMTWGYESSLLRVIRKKAAEATGVH 798
            V +TY+NGI  ++ D    +S +  +FG +   F+N T+G  +AD S+A    +       V   LAEHL   + +VG  G V+H+AHS GAL+T+L  K+ LS  Q A+I V+ FGGA SLT   + G  VNYY+ N+P++++D RA+  +K                 RN   ++                   V +  T+F+FL   A  R  + DHS  G TYM+ALR EA+ FR +HF   S +    E+S     R     A G H
Sbjct:    2 VRLTYINGIRTDKRDCLTAASVISGLFGCDCYPFWNKTAGA-LADLSQAARQKIFNVETSEVKD-LAEHLKLHLREVGKDGIVVHIAHSQGALITFLCKKF-LSVAQRARILVIVFGGASSLTNDDY-GDTVNYYSTNEPMLYIDARASKALKKLEAEGVASAQHGILLRRNASDDEGRKWFSFIGKSPAFPPGVQVEQDGTSFIFLHPVAGGRFGLVDHSFLGATYMKALRFEAEKFRTQHFSWWSRLVRSIETSEFMRSRSSQMSAPGDH 269          
BLAST of mRNA_S-ischiensis_contig14.3327.1 vs. uniprot
Match: A0A7S3GYT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GYT0_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.110e-25
Identity = 53/100 (53.00%), Postives = 77/100 (77.00%), Query Frame = 1
Query:   88 VAITYVNGIFHNRTDWEQLSSQLQQIFGHEVRAFYNPTSGWWIADASRAGYHLVRKPNDDSVAQALAEHLAAAVSDVGPK-GRVLHLAHSGGALLTYLAA 384
            + +T+VNGI+H+  +  +L+  L+ +F  +VR FYNP+SG W+ DA +AG+ LV +PND  +A+ LAEHL +A+ +V PK GRVLH+AHSGGA++TYLAA
Sbjct:   92 MVLTFVNGIYHSEKEVRELAIYLRCMFRSDVRTFYNPSSGSWVKDAYKAGFELVLRPNDLILAKQLAEHLRSALREVHPKKGRVLHIAHSGGAIITYLAA 191          
BLAST of mRNA_S-ischiensis_contig14.3327.1 vs. uniprot
Match: A0A7S2XT02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XT02_9STRA)

HSP 1 Score: 108 bits (269), Expect = 5.630e-23
Identity = 75/224 (33.48%), Postives = 120/224 (53.57%), Query Frame = 1
Query:   79 LPGVAITYVNGIFHNRTDWEQLSSQLQQIFG-HEVRAFYNPTSGW-------WIADASRAGYHLVRKPNDDSVAQALAEHLAAAVSDVGPKGRVLHLAHSGGALLTYLAAKYHLSPEQAAQIDVVTFGGARSLTRKYFSG--RAVNYYARNDPLVHLDRRANSVMKSTRNTKYEQVVAKHNTTFVFLEGKARHAIRDHSLEGPTYMRALRSEAKAFRRRHFGPL 720
            +P   +T+VNGI HN     +    +  +FG  +V   +NPT+         +I D ++AG H   +   +    AL  HL  A+  VG +GRV+H+AHS GAL+T LA +   S  + ++++V+ FGG   + +  F    R VNYY+ NDPL++++ RA   + S           +++  FVFL  +    I +HSL GPTYM+AL  E + F+++   P+
Sbjct:   48 VPRSRLTWVNGIGHNLQHMGEGVVDISSLFGGKKVEFCHNPTAMTSDDDYVGYIGDLTQAGIHKWGRITGE--VDALVIHLKQALKAVGSRGRVVHIAHSQGALITNLALR-RFSESELSRMEVLCFGGGAVIGKADFPALRRVVNYYSVNDPLLNINPRAVQALNSG-------FTFQNDPEFVFLTPRVSDPIIEHSLTGPTYMQALAWEGQRFQQQFQSPV 261          
BLAST of mRNA_S-ischiensis_contig14.3327.1 vs. uniprot
Match: A0A7S2KM92_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KM92_9STRA)

HSP 1 Score: 102 bits (253), Expect = 7.050e-21
Identity = 77/242 (31.82%), Postives = 122/242 (50.41%), Query Frame = 1
Query:   49 WTQDGTRYPALPG-VAITYVNGIFHNRTDWEQLSSQLQQIFGH-EVRAFYNPTSGW-------WIADASRAGYHLVRK---PNDDSVAQALAEHLAAAVSDVGPKGRVLHLAHSGGALLTYLAAKYHLSPEQAAQIDVVTFGGARSL-TRKYFSGRAVNYYARNDPLVHLDRRANSVMKS--TRNTKYEQVVAKHNTTFVFLEGKARHAIRDHSLEGPTYMRALRSEAKAFRRRHFGPLSPM 729
            WT        LP    +T+VNGI H        +  +  IFG  +V   +NP+S         ++ D  +A  H++     P  DS    L EHL  A+  VG  GRV+H+AHS G+++T+LAAK  L PE+  +I++++FGGA ++ T ++   R +NYY+ NDP++++   A   +KS  +     +Q +       +FL  +      DH L  PTY+ AL  E + ++     PL  M
Sbjct:   19 WTAHSCYGKLLPRRTKLTWVNGIAHMPEHMSDPTFVISTIFGGVKVDYCHNPSSMTSESDYLGFVKDGIQASTHVMMSRFTPEVDS----LVEHLRDALKQVGRNGRVIHIAHSQGSVITWLAAK-RLKPEECKRIEIISFGGAATICTSEFPFARCINYYSVNDPILNVVPSAVKALKSGFSFGDGMQQEI-------IFLASRTGDPATDHGLLNPTYLEALVWEGQRYQSLFVSPLGQM 248          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig14.3327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LFC9_ECTSI4.770e-11264.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5Y0_9PHAE1.780e-10254.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CL88_9STRA7.370e-9155.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482SJI3_9ARCH5.490e-8252.85Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
K8YTC9_NANGC3.910e-7546.21Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
W7U1H3_9STRA3.880e-7046.21Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S4PRT6_GUITH1.640e-2934.56Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A7S3GYT0_9STRA1.110e-2553.00Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2XT02_9STRA5.630e-2333.48Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S2KM92_9STRA7.050e-2131.82Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig14contigS-ischiensis_contig14:1866835..1878007 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score363.6
Seed ortholog evalue1.1e-97
Seed eggNOG ortholog2880.D8LFC9
EggNOG OGs2E49U@1,2SB7M@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-07_005830.1
Exons8
Model size1149
Cds size1146
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig14.3327.1prot_S-ischiensis_contig14.3327.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig14 1866835..1878005 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815721.597905-CDS-S-ischiensis_contig14:1866834..18669931622815721.597905-CDS-S-ischiensis_contig14:1866834..1866993Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1866835..1866993 +
1695739874.9258313-CDS-S-ischiensis_contig14:1866834..18669931695739874.9258313-CDS-S-ischiensis_contig14:1866834..1866993Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1866835..1866993 +
1622815721.6093209-CDS-S-ischiensis_contig14:1868965..18690861622815721.6093209-CDS-S-ischiensis_contig14:1868965..1869086Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1868966..1869086 +
1695739874.9354823-CDS-S-ischiensis_contig14:1868965..18690861695739874.9354823-CDS-S-ischiensis_contig14:1868965..1869086Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1868966..1869086 +
1622815721.62033-CDS-S-ischiensis_contig14:1870145..18702691622815721.62033-CDS-S-ischiensis_contig14:1870145..1870269Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1870146..1870269 +
1695739874.9438713-CDS-S-ischiensis_contig14:1870145..18702691695739874.9438713-CDS-S-ischiensis_contig14:1870145..1870269Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1870146..1870269 +
1622815721.6317418-CDS-S-ischiensis_contig14:1870764..18708411622815721.6317418-CDS-S-ischiensis_contig14:1870764..1870841Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1870765..1870841 +
1695739874.9537115-CDS-S-ischiensis_contig14:1870764..18708411695739874.9537115-CDS-S-ischiensis_contig14:1870764..1870841Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1870765..1870841 +
1622815721.6424778-CDS-S-ischiensis_contig14:1872097..18721891622815721.6424778-CDS-S-ischiensis_contig14:1872097..1872189Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1872098..1872189 +
1695739874.9667146-CDS-S-ischiensis_contig14:1872097..18721891695739874.9667146-CDS-S-ischiensis_contig14:1872097..1872189Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1872098..1872189 +
1622815721.6579046-CDS-S-ischiensis_contig14:1874728..18748461622815721.6579046-CDS-S-ischiensis_contig14:1874728..1874846Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1874729..1874846 +
1695739874.974668-CDS-S-ischiensis_contig14:1874728..18748461695739874.974668-CDS-S-ischiensis_contig14:1874728..1874846Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1874729..1874846 +
1622815721.6770363-CDS-S-ischiensis_contig14:1876987..18771651622815721.6770363-CDS-S-ischiensis_contig14:1876987..1877165Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1876988..1877165 +
1695739874.9824345-CDS-S-ischiensis_contig14:1876987..18771651695739874.9824345-CDS-S-ischiensis_contig14:1876987..1877165Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1876988..1877165 +
1622815721.6914515-CDS-S-ischiensis_contig14:1877728..18780051622815721.6914515-CDS-S-ischiensis_contig14:1877728..1878005Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1877729..1878005 +
1695739874.9904404-CDS-S-ischiensis_contig14:1877728..18780051695739874.9904404-CDS-S-ischiensis_contig14:1877728..1878005Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1877729..1878005 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig14.3327.1

>prot_S-ischiensis_contig14.3327.1 ID=prot_S-ischiensis_contig14.3327.1|Name=mRNA_S-ischiensis_contig14.3327.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=382bp
SGYGWCSLDWGWDGRKWTQDGTRYPALPGVAITYVNGIFHNRTDWEQLSS
QLQQIFGHEVRAFYNPTSGWWIADASRAGYHLVRKPNDDSVAQALAEHLA
AAVSDVGPKGRVLHLAHSGGALLTYLAAKYHLSPEQAAQIDVVTFGGARS
LTRKYFSGRAVNYYARNDPLVHLDRRANSVMKSTRNTKYEQVVAKHNTTF
VFLEGKARHAIRDHSLEGPTYMRALRSEAKAFRRRHFGPLSPMTWGYESS
LLRVIRKKAAEATGVHDFFTDWPGVRRFRKAVARVTGQHGFFSDKLHDLV
EGELDIAPPFPEWAGPHTPPTASAAAAGRSNIDGNRSSSSSSSSGPGGRG
GVGTWVSRLWPLSNASADKGIYSDEEEEALAE
back to top

mRNA from alignment at S-ischiensis_contig14:1866835..1878007+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig14.3327.1 ID=mRNA_S-ischiensis_contig14.3327.1|Name=mRNA_S-ischiensis_contig14.3327.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=11173bp|location=Sequence derived from alignment at S-ischiensis_contig14:1866835..1878007+ (Schizocladia ischiensis KU_0333)
TCGGGATACGGTTGGTGCTCTCTCGACTGGGGCTGGGACGGGCGGAAGTG GACCCAGGATGGCACGCGCTACCCGGCGCTCCCCGGCGTGGCTATCACGT ATGTCAACGGCATCTTCCACAACAGAACGGACTGGGAACAGCTCTCGTCG CAGCTTCAGGTTAGGTCAGCGAGCTCTCCGCTGCCCGTCCTCTGCTGCAG CTGCCATTGTTGGCTGTTCTTTCACATACGAGCACGGCAGGTGCTCTGTG CCCACAAACCTATTCCCAAAATGAATGGGGTGCGCATGGTCAGTAGGCTC TGGGCTTCGGCACGCACGGCGCAAGCACACGGCAGCAGACACAGTGTAGC ATGCATGCAAAAAGAAGCGAAACCAACTTTACTTTGACAGGCCGACCCAC CTGCGGGGGCCCTTTCTGTGTCGAGCCAGATTCAGTATGGGGCGGAAAAT TCTTTGCGTGGAAACAGCGGCGGCTTGCCTCTCCCTCCGTGCCTTCACCT CTCCCATTTGAAATCGAACACCGCTGCCGAGCCTACCGGAGAAACTGCCG TCACTTGAAAGCTGTGGGTGGCTGAGCGTGAATTGTAGTCACTCCGATAC TGCGGCTGCAGCTGACAATCACTACTGTATACTGATATATGCACACTCAA TTCTTAAACAGGACAACTACTAGTACGAGAACACTCAATCTGATACGCGT GCTACTGTACCTCGTTACAGTTTATATGAATCACTGCGGCTGCAGCTGCT GTGCTTTTTCACTTGTTCAAGGCTCGCTTGGCTTGCCACAGAAGTGTCTG GCGCATGCTACATACAAAGTATGCAGAGGGCTACTGCAGCTGCGTGCTGC AGCAGTATGTGCAGTGCTGTGCACTGTGAAACTGCTAGGTATTACGAAGT ACTCAAGTATAGTACTGCGCAGAGGTACAGTAAGGTACCTACCGTACCGT ACAGCAACTATATGCATACACTCTACAGCCCCACTTAGCCGTCGCGCTTC GACTTAGCCCCGAGCCTGTCGTTGCCCGCGGCGCGCCTCATTGGTGCCAT GTGATGACGCGCCGCAGCGCTTCAAACTGCACATCACATTACATCACGTC ACATCACGTCATGTCAGTGATGGAATATCCAAGCAAATCAACCTATTTAT CGACGGCACTGATCTATTTTAGATTGTGTTGATGGCATGCTATCGATGGT CGATATTCGATCGTTTGACCCACACTAAATCCAAGCAGTTAGTAACGGCA CCCACAAAATCAGTCGAGCCCGATACCTAGCTACTGATCGATATTCCATC GCTGCCAGCAAATATTCCGGCACGAGGTGCGCGCCTTCTACAACCCCACC AGCGATACTGCAGTCGATATTCGATAGGTGGACCCGTTCAATAGTTTGAC CCACACTAAATCCAACTACGAAGTACGATGTAGTAACGCCACCCACAATA TCAGTCGAGCCCGATAACTGGCTACTGATCAATATTCCGGCATTGCCAGC AAATCTTCGGGCACGAGGTGCGCGCCTTCTACAACCCCACCAGCGATAGT CGATATTCGATAGTTTGATCCACTCTAAATCCAAGCAGTTAGTTAATAAC GCCACACACAAATCAGTCGAGCCCGATAGCCATCTACTGATCGATATTTC ATCACCGCCAGCAATGTCCCCTGGCGAGCTATAAGGAAGGGCCGCTGCTG AGGTCTCTAGTGACGTGGCCCGCACCTCGCCCCGTGTTGTTCCTATTAGC ACTGCCAGCAAATCTTCGGGCACGAGGTGCGCGACTTCTACAACCCCACC AGCGATACTGTAGTCAATATTCAATTGTTTGACCCACACTAAATCCAAGT AGTTGGCAACACCGCCCACAAACTCAGTCGAGCCCGATAACTATCTACTG ATCGATATAGGGAAGGGCCACTGCTGAGGTCTCTAGTGACGTGTCTCGCA CCTCGCCACGTGTTGTTCCTGTTAATACTGATCGATATTCCACCACTGCC AGCAAATCTTCGAGCGCGAGGTGCGCGACCTCTACAACCCCACCAGCGAT AGTCGACATTCGATAGTTTGACCCACACTAGCCCTAAGCCCAGCAACTAT CTACTGATCGATGATATTCCATCACTGGCAGCAAATCTTCGGGCACGAGG TGCGCGCCTTCTACAACCCCACCAGCGGCTGGTGGATCGCGGATGCCTCT AGGGCGGGGTACCACCTGGTGCGCAAGCCCAATGACGACTCCGTCGCCCA AGGTGAGGTTGTGTGTGCGTGGGTGTGTGCGTGTGCTTGTGTGTGTGTGT GTGTATGTGTGCGTGTGTGTGTGCTTGTGTGTGTGTATGTGTGTGTGTGT GCGTGGGCCGGGTACCACCTAGTGCGCAAGCCCAACGACAACTCCGTCGC CCAAGGTGATGTGTACTATACTCTAGTGTACTGTAGGTAGTTTGACATGA TGTGTACTTTACTCTAATTTACTGTAGTTTGACATCACATTACATCACAT CACATCAACCTACAGTATGTCGTGTCCCGTCGCCGTGTGTGTGTGTGCCG GTGTGCCTGCGCGCACCCGTGTGCGTTTGTGTGTGTGTGTGTGTGTGTGT GTGTGCGTGTGTGCCTTTGTGTGTGTGTGCGCGCAAGCCCAACGACGACT CCGTCGCCCAAGGTGAGGTTGTGTGTGTATGCATGTGTGTGTGTGTGTGG GGGGTGCCCCTGGTGCGCAAGCCCAACGACGAATCCGTCACCCAAGGTGG GGTTGTGTGTGTGTGTGTCCGTGTGTGTGTGTGCGCGTGTGTGTGTGCAT GCGCAAGCCCAACGATGACTCCGTCGCCGTGTGTGTGTGTGTGTGTGTGC GGACGCGCGTGTGTGTGTAGTAGCGCCACCCACAAAATCAGTTGAGCCCG ATAACTATCTGCTGATCGATATTCCATCGCTGCTCGTTGATGATGCGCAA CCCACGCGGAGCACCTGGCCGCGGCAGATTCGGACGTGTGCCCTGATCTA CTTCGAAGTACGAAATGCTCGTATCTATCTATCGATAGTCGATATTCGAG TGTTTGACCCGCACTAGATGCAAGTAGGTAGTCAGTAACGCCACTCACAA AGTCAGTCGAGCCTGATAACTATCTCCTGATCAGTATTCCATCACTTCTT CTCAATAAAAATCGTACGAGAACACTCAATCTCACACACGTGCGATTGCA CCTCGTTACATTTTTTTGAATGATTGTTTGACATGCGAGTTCCAGGCTCC GTCCCAACAACCTAAGGTGGGGGATTTACATGAATCATCACTGCTTGTTG ATTATGCGCAGCCCTGGCGGAGCACCTGGCGGCGGCGGTTTCGGACGTGG GCCCCAAGGGCAGGGTGTTGCACCTCGCACACAGCGGGGGGGCCCTTCTC ACGTACCTGGCCGCCAAGTACCACCTCTCCCCCGAGTGAGTGTGTGTGTG TGTGCGCGCGCCCTTCTCACTTACCTGGGGGCCAAGCACCACCTCTCCCC CGAGTGAGTGAATGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG CGTGCGTGTGTGTGTGTGTGCGCGCCCTTCTCACTTACCTGGGGGCCAAG TACCACCTCTCCCCCGAGTGAGTGAGTGTGTGTGTGTGTGTGTGTGTGTG TGCGTGCCTGCCATGGATGCGAGGTTGGGCTCTCATTGGCCTTCACGCCC GTCTCGCCAGCCATCCCACCAACCCGACACCATGCTGCTGCTGCTGCTTG CTGCGGCTGCTGCTGCTGCTGCTGTTGCTGCTGACGATGATGATGATGAT GATGGTGACGATGATCCAAGTACTGTAGTTGGAAATGCCACCCACAAAAT GAGTCGGGCCCGATAACTATCTACTGATCGATAGAACATCACTGCTCCCA CCGCCGCCGCCACAATGGGCATGGCATCAGGCAAGCGGCGCAGATCGACG TGGTGACCTTTGGCGGCGCGAGAAGCCTCACGCGCAAGTACTTCAGCGGC CGAGCAGGTCAGTGCGGTGCCAGTGATGGAATATCTAAGTAAATCAACCT ATTTATCGACAGTACTGATCTGTATGTCTATCGATATTGTAGTCGATATT CGTTAGTTTGACCGCAAGCACTTCCGCGGCCGAGCAGGTCAGTCGGTGCC AGTGGTGGAATATCGATCAGTGGACACTATCGGGCTCGATTGATTTTGTG GGCGCTACTACAGTAACTACTTGGATCTAGTCTGGGTCAAACTATCGAAT ATCGACTATCGATGGTGACCTTTGGCGGGGCGAGAAGCCTCACGCGCAAG TACTTCAGCGGTCAAGCAGGTCAGTCGGTGCCAATGATGGAATATCTAAG CAAATCAACCTATTTACCGACAGTACTGATCTGTATATCTATCGATTTTG TAGTCGATATTTGATAGTTTGACCGCAAGCACTTCCGCGGCCGAGCAGGT CAGTCGGTGCCAGTGATGGAATATCTAAGCGAATCAACCTATTTATTGAC AGTGCTGATCTATACTTGAGTGGTAGAAAAGTGGCGAGTTCCAGGCCCCG TGCCAAAAGGCTCGTCCCGAAACAGGACTCAACGAACCCCTCCCCTTCCC TTGCAGGGCAAGAAGAAAACAAAAATTGAAGAAAGAAAGGGGATCCATAT ATCTATCGATAGTCGATATTCGATAGTTTGACCCACACTAAATGCAACGA AGTAGTTAGTAGCGCCACCCACAAAATCGTGTCGCAAGAGACCCGGATTT ATCCCCCACTGCCCCCTTCCCCTTTCCCCTTGGTTTCTTTATATTTCCCC CTACTGCCCCCTTTCCCTCTTGATTTTTCGCCCTGCGAGTGAAGCCGGGG AATTGACGGGCTTCCGTGTTGGGGCCCGGGACTCGCACAAGTAGGATCGC CTCTATTTCCCACTCGCTTCTTGTCTTTCCACCCACAAAATCAGTTGAAC CCGATCACTGACCTCGCGTAAGTAGGAACACCTCTTCTTTTCCACTCGCT TTTCATCTTCATGCCAAAAAACACTGTATCTACTGATCGATATTCCGTCA CTGTTCCGCCACCACCGCTGTCAGTGAACTACTACGCCCGGAACGACCCC CTGGTGCGCTTGGACCGCCGGGCCAACTCCGTGATGTTGATGTGATGTGA TGCTATGTCAAACTACAGTACTTCGAAGTAAATCAGAGTGCACTTAACAT CACATCACATCATTGCTGATCGATATTCCATCACTGACCTTGATGCTCCG CTGCCGCTGTCAGTGAACTACTACGCCCGGAACGACCCCCTGGTGCACTT GGACCGCCGGGCCAACTCCGTGATGAAGAGCACCCGCAACACCAAGTATG AGCAAGTGAGTCATTTCGCTGGTCGTTTTTTTTGTTTTTTTTATTTGCCC CTTCTCTATACCTGCACATTTCCCACTTGGACCGAAGGGCCAACTCAGTG ATGAAGAGCACCCGCAACACGAAGTATGAGCAAGTGAGTCATTTGGCCAG TGATGGAATATCGATCAGTAGATAGGTATCGGGAATATCGATCAATAGAT AGGTATCGGGAATATCGATCAGTGGATAGTCATTGGGCTCGACTGATTTT GTGGCACCTGGACCGACGGGCCAACTCCGTCATGGAGAGCACCCGCAACA CCAAGTATGAGCAAGTGAGTCATTTGGCTGCCCGTTTTTACTTCGAAGTA CTTCCCCCCCCCCTTCTCTATGCCTACACAAGCAACACACAGTATGAGGC CGTGAGTCGTTTGGGCGATTTTTTTCTGTCATGAGGAGTACACGCAACAC ACACCTTGAGGCCGTGAGTCATTTGGCTGGTCGTTTTTTCCCCCCTTCTC TATACCTACACAAGCAACATGCAGTATGAGGCCGTGAGTCGGTGATTCAT ATAAATTGTAGCGAGGTACAATCGTACGTGTGTGAGATTGACTGTTCTCG TTTGGCTGGTCGCTTTTTTCCCGACGGGCCAACTCCGTCGTGAAGAGCAC GCGCAACACCCAGTATGATACAGTGAGTCATTTGCTTCTTCGCTGTTATT TTTAAGTCCCAAGGAACCCCGCATTTGCTCACTACTCCAGGTAAATGATC CATTTGTGGACGTCGGCTTGATACCATTTTGCGCCGTCGCGGTAATCTGA AGGAAACGCATGGTGAACATCATGCCAATTTTCACCAAGGAGCAAAACTG CAGGCTGGTCGTTGTTTTCCCCCATCTCTATACCTGCACAAGTCCGTCAC TCGCAGGGCCAGCAACACGCAGTCTGCCGCCGTGAGTCATTGCCTGGTTG GTCGTccccccCCCCCCCCTTCTTTTCCCCCGCCCCGTCGCACGGAGGAC AAGAAATGCACGGCGCGGACTGCTGTCTGTGTGAGGCCGCGAGTCACTCG GCCGATGCAGCAGCGAGCAGCAGTAGCCACCAATACGAGAACGCTCAATC TCACACCCGTGCGATTGTACCTCGTAGCAATTCAAGTGAGGCACCGCAGC AGTAGCCACTGTGCCAAGCGCACGAGGTAGTGCTGTGCATCGTATCGCTC ATCGCGTACTGTATATCGCGCATCACTTATCGCGGCCAAGTTGGGAGGTA TCACACATGGAGCGTCTGTCTGTCTGTCTGTCTGTGTGAGGCCACGAGTC ACTTGGCTGATGCGGTAGCGCGCACCAGTACCTAGCCAGTGTGCCAAACA CACGAGGTAGTGCTGTGCATCATATTGCTTATCTCGTATCTCGCATCGCT TATCGTGGCCAAATTGGGAGGTATCGCATGTGGAGCATGCGGCCGCAATG CTTGCCATGCCGAACCGGTTTAGGTTCATGGTGTGTTCGAGGCGACGGCA GCACTGCAGTAGTCGGTGACTTTGCACACTACGTATATACATACACGAAG TGTATATATCATCTCCGGCAACCACCGGGATATAGCCATTGCCAACATCG CGCATCTGGTCGTCAATGCGCCCGTTGCCTGACATCGAAATCGATGCACC GAAACCTCCCTTTTTTGTTTTCGATCCCTTGATGTGATAGTCACTAGTGC GAGAACACTCAATTTCTTAAACGTGACAAGCACTAGTACGAGAGCACTCA ATCTCACACACGTGCGATTGTACCTCGTTGCATTTTTTTTTTGAATTGTT GTTTGACATGCGAGTTCCGGGCCCGGTCCCAAAAACCGAAGGTCACCAGA AGCCCTTCTTGTCACCCGCAGGGCACAAAAATCAAGAAAAGAAGCCACAA AGAGGGGCAAGGCAGGGGCAATATGGGGGGGTCTCTGTCGTGCCGCGTTG CTGACATACCTGCGAGAGCGTGCGCACGTTGAAGTTGGAGGTGCGGACAG CAAGAGAAGTCATCAGCAAGTGCGATGGGGAGTAACGCGCACTAGCCATG TGAACATACGAGCGTACCAACGCTAGGCCAACGTGTAGTACTTGGAAGTA TGAATCACTGATGGACCCCGCAGCCGCGACCAGTCGTGCCGACCGACCCA TCGTTTTTATTTCGTCCAGTCGGCTCGCGATTTTGACCGATTGCCCCCTG GTGGTCCCATCGACTCACATGAAACCCCCCGGGGACCCACCATGATAAGC ACTAAAACGAGAACGCTCGATTCTTAAGTGTGATGGCCACTACAGCACAT GCGAGAATTCTCAATTCTTAAAATGTGATCACCACTAATTCGAGAACACT CAATTCTTAATGGTGATAGCCACTAATACGAGAAACACTCAATGCTTAGT CAGGTGGTGGCGAAGCACAACACGACGTTTGCTTTTGGAGGGCAAGGCCA AGCACGCCATCCGCGACCATAGGCACTAGTACGATAACACTTAATTGTTA AATGTGATAACCACTAATCCGAGCAACACTCAATGCTTATTCAGGTGGTA GCGAAGCACAACACCACGTTTGTTTTCTTGGAGGGCAAGGCCAGGCACGC CATCCGCGACCACTCCCTGGAGGGGCCCACGTACATGCGTGCGCTCCGCA GCGAGGCCAAGGGTGAGCAGAGTACATAGTGATTCACATAAATTGAAACT CCGCCTCGCACGAGGCGCGGGGTCACTGGTCTCGGGACTACGGCAAGCAC CACGTGAGCACATATATATACACTTCGTAATTGTAACTGAAAGTGCCCTG CGGGTGAAAAGAAGGGCTTCTGGTGAGGTCCCCACCTTAGGGTTGTTGGG ACGGGGCCCGGAACTCGCATGCCATCCAACTAATGTAAAAATCGTAACGA GGTACAATCGCACATGTGCGAGATTGAGTGTTCTCGTGTTGGTGGTGATC ACATTTAAGGTTTGAGGGCATAGTGAAGTTTTTTTGGTTTTTTTGCACGG CACGCCCAACTTTGTGGGTGAGTCGATTACATTTTACCATACATAATTGT CGCAGAGATCTTGCCCCCCCATGCCAATTTTCGGGAGATTTTTTCTCGCC GAATACTGGCCGGATTCGCGCAGGAAGGAAAACTCGGAAAATCTCCCTCA GGACCTGGGGGAACCTTTCTGAGAGTTTTCGGGACAATTCAGTGACCTTC CGGGCTAGAAATACTCCTCCGAAAATTGGCCCGTGAGGGCAAAATCTCTC CGACGATTACGGTACCTGTATGTCGAACACCAGAGCGTATTCCCCCCCCC CCCCCTCTCTTTAGGGGCCCACATACTTCATGCGTGTGCTCCGCAGCGAG GCCAAGGAGTACGTACCATAGTCGTCGGAGAGATCTTGCCCCCCCATTAC AATGTTCGGGAGAACTTTTCTCCTCGCCGAATGCTACTGGTCGGATTCGC GCGGGAAAACTCGGAAAATCTCCCTCAGGACCTGGGGGAACTTTTCCGAG GGCTTTCGGGAACGATTTAGGACCTTCCCGTCTAGAAAGATTGGCCATTG CCATTCCCCTCCCCTCTCTCATTGGCCGCCGCCCCTTCCCGCACCCTCTC ATTGGCCATTGCCACTCCCCGCCCCTCTGTCATTGGCCGCTGCCCCTTCC CGCCCCTCTCTCATTGGCCGCTGCCCCTTCCCTCCCCTCTCTCATTGGCC GCTGCCCCTTCCCGCCCCTCTGTCATTGGCCACTGCCCCTTCCCGCGCCC TCTCGTTCGCCATTGCCCCTTCCCGCCCTGTTCCTCTCATTCGGCGCGCC TGCAGCCTTCCGGCGCCGGCACTTCGGCCCCCTCTCTCGTTGGCCGCCGC CCCTTCCCGCCCCTCCGTCATTGGCCGCTGCCCCTTCCCTCCCCTCTCTC ATTGGCCGCTGCCCCTTCCCGCCCCTCTGTCATTGGCCACTGCCCCTTCC CGCGCCCTCTCATTTGCCATTACCCCTTCCCGCCCTGCTCCTCTCATTCG GCGTGCCTGCAGCCTTCCGGCGCCGGCACTTCGGCCCCCTCTCTCATTGG CCGCCGCCCCTTCCCGCCCCTCCGTCATTGGCCGCTGCCCCTTGCCTCCC CTCTCTCATTGGCCGCTGTCCCGTCCCGCACGCTCTCATTGGCCATTGCC ACTCCCTGCCCCTCTGTCATTGGCCGCTGCCCCTTCCCTCCCCTCTCTCA TTGGCCGGCGCCCCTCCCCTCCCCTCTCTCATTGGACGCCGCCCCTTCCC CTTCCTGCCCTGCTCCTCCTCTTTCGGCGCCGCGCAGCCTTCCGGCGCCC GCAATTCGGCCCCCTCTCCCCGATGACCACTACTGTAGTACGAGAACACT CACTTCTGAAATGGGATAACCACTACTGTAATACGAGAACACTCAATCTC ACGCACGCGCGGTTGTACCTCGTTGCATTTGATATGAATCACCGCCCCTT CCCTTCCCGCCCTGCTCCTCTCATTCAGCGCGCACTGCAGCCTTCCGGCA CCGGCACTTCGGCCCCCTCTCCCGATGATGTGGGGTAGAGGTATTTAGGG GTAATGAGACCTAAAATGAAGGCTAATTAGGCCGTACTTAACCTCTAAGT GCCAACCCTGCTCTCATTGGCCGCCGTGCAGCCTTCCGGCGCCGGCACTG CGGCCACCTCTCCCCGATGACGTTGGGATAGCCACTACTGCAATACCAGA ACACTCAATCTCACACACGTGCGATTGTACCTCGCTACGATTTGCTTCGA AGTATATGAATCACCGCCCCTCCCCGCCCTGCTCTCATTCGGCGCGCCTG CAGCCTTCCGGCGCCGGCACTTCGGCCCCCTCTCCCCAATGACCTGGGGC TACGAGTCCTCGCTGCTAAGGGTCATCCGGAAGAAGGCGGCGGAGGCGAC GGGCGTCCACGATTTCTTCACCGACTGGCCGGGAGTTCGGCGCTTTAGGA AGGCGGTGGCGAGGGTCACGGGGCAGCACGGGTGAGAGCCAGTGATGGAA ATGTTTTAAAAATGGAATATCGATAAGTAGATATTTATCGGGCTCAACTG ATTTTGTGGGTGGCGTTACTAACGCAGTGTCATTTGACATCACGTCGCAT CACATAGTTATCGGGCTCAACTGGTTTTGTGGGTGGCGTTACTATTGTAA CTACTTGGATTTAGTGTGGGTCAAACTATCGAATATCGACTATCGATAGA TACATAGATCAGTACCGTCGACAAGTGCTGCGGGTGATCCGGAAGAAGGC GGCGGAGGCGACGGGCGTACACGACTTCTTCGCCGACTGGCCGGGAGTTC GGCGCTTTAGGAAGGCAGTGGCGAGGATCACGGGGCAGCACGGGTGAGAA TATCGATCAGTAGATAGTTGTCGGGCTCGACTGATTTTGTGGGCGGCGTT GCTAGCTAAGTACTTGGTGTAGTGTGGGCCAAGCTATCGAATATCGACTA TCGATGGATATACTTCATATAGGTTTGTACTGTCGATAATTGATTTGCTT AGATGACGTGGCGAGCGGCTCACGGGTACAACCCCCAAACACAGGTTCTT CAGCGATAAGCTCCATGACCTTGTGGAGGGAGAACTGGACATCGCCCCTC CCTTCCCCGAGTGGGCCGGCCCGCACACGCCCCCTACCGCCTCCGCCGCC GCCGCCGGGCGCAGCAACATTGACGGCAACCGCTCCTCCTCCTCCTCCTC CTCCTCCGGTCCCGGCGGCCGCGGCGGCGTTGGCACGTGGGTCTCCCGCC TGTGGCCGTTGAGCAACGCCTCGGCCGACAAGGGGATCTACAGCGACGAG GAAGAGGAGGCATTGGCGGAGGA
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig14:1866835..1878007+

>mRNA_S-ischiensis_contig14.3327.1 ID=mRNA_S-ischiensis_contig14.3327.1|Name=mRNA_S-ischiensis_contig14.3327.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2292bp|location=Sequence derived from alignment at S-ischiensis_contig14:1866835..1878007+ (Schizocladia ischiensis KU_0333)
TCGGGATACGGTTGGTGCTCTCTCGACTGGGGCTGGGACGGGCGGAAGTG
GACCCAGGATGGCACGCGCTACCCGGCGCTCCCCGGCGTGGCTATCACGT
ATGTCAACGGCATCTTCCACAACAGAACGGACTGGGAACAGCTCTCGTCG
CAGCTTCAGTCGGGATACGGTTGGTGCTCTCTCGACTGGGGCTGGGACGG
GCGGAAGTGGACCCAGGATGGCACGCGCTACCCGGCGCTCCCCGGCGTGG
CTATCACGTATGTCAACGGCATCTTCCACAACAGAACGGACTGGGAACAG
CTCTCGTCGCAGCTTCAGCAAATCTTCGGGCACGAGGTGCGCGCCTTCTA
CAACCCCACCAGCGGCTGGTGGATCGCGGATGCCTCTAGGGCGGGGTACC
ACCTGGTGCGCAAGCCCAATGACGACTCCGTCGCCCAAGCAAATCTTCGG
GCACGAGGTGCGCGCCTTCTACAACCCCACCAGCGGCTGGTGGATCGCGG
ATGCCTCTAGGGCGGGGTACCACCTGGTGCGCAAGCCCAATGACGACTCC
GTCGCCCAAGCCCTGGCGGAGCACCTGGCGGCGGCGGTTTCGGACGTGGG
CCCCAAGGGCAGGGTGTTGCACCTCGCACACAGCGGGGGGGCCCTTCTCA
CGTACCTGGCCGCCAAGTACCACCTCTCCCCCGACCCTGGCGGAGCACCT
GGCGGCGGCGGTTTCGGACGTGGGCCCCAAGGGCAGGGTGTTGCACCTCG
CACACAGCGGGGGGGCCCTTCTCACGTACCTGGCCGCCAAGTACCACCTC
TCCCCCGAGCAAGCGGCGCAGATCGACGTGGTGACCTTTGGCGGCGCGAG
AAGCCTCACGCGCAAGTACTTCAGCGGCCGAGCAGGCAAGCGGCGCAGAT
CGACGTGGTGACCTTTGGCGGCGCGAGAAGCCTCACGCGCAAGTACTTCA
GCGGCCGAGCAGTGAACTACTACGCCCGGAACGACCCCCTGGTGCACTTG
GACCGCCGGGCCAACTCCGTGATGAAGAGCACCCGCAACACCAAGTATGA
GCAATGAACTACTACGCCCGGAACGACCCCCTGGTGCACTTGGACCGCCG
GGCCAACTCCGTGATGAAGAGCACCCGCAACACCAAGTATGAGCAAGTGG
TAGCGAAGCACAACACCACGTTTGTTTTCTTGGAGGGCAAGGCCAGGCAC
GCCATCCGCGACCACTCCCTGGAGGGGCCCACGTACATGCGTGCGCTCCG
CAGCGAGGCCAAGGGTGGTAGCGAAGCACAACACCACGTTTGTTTTCTTG
GAGGGCAAGGCCAGGCACGCCATCCGCGACCACTCCCTGGAGGGGCCCAC
GTACATGCGTGCGCTCCGCAGCGAGGCCAAGGCCTTCCGGCGCCGGCACT
TCGGCCCCCTCTCCCCAATGACCTGGGGCTACGAGTCCTCGCTGCTAAGG
GTCATCCGGAAGAAGGCGGCGGAGGCGACGGGCGTCCACGATTTCTTCAC
CGACTGGCCGGGAGTTCGGCGCTTTAGGAAGGCGGTGGCGAGGGTCACGG
GGCAGCACGGCCTTCCGGCGCCGGCACTTCGGCCCCCTCTCCCCAATGAC
CTGGGGCTACGAGTCCTCGCTGCTAAGGGTCATCCGGAAGAAGGCGGCGG
AGGCGACGGGCGTCCACGATTTCTTCACCGACTGGCCGGGAGTTCGGCGC
TTTAGGAAGGCGGTGGCGAGGGTCACGGGGCAGCACGGGTTCTTCAGCGA
TAAGCTCCATGACCTTGTGGAGGGAGAACTGGACATCGCCCCTCCCTTCC
CCGAGTGGGCCGGCCCGCACACGCCCCCTACCGCCTCCGCCGCCGCCGCC
GGGCGCAGCAACATTGACGGCAACCGCTCCTCCTCCTCCTCCTCCTCCTC
CGGTCCCGGCGGCCGCGGCGGCGTTGGCACGTGGGTCTCCCGCCTGTGGC
CGTTGAGCAACGCCTCGGCCGACAAGGGGATCTACAGCGACGAGGAAGAG
GAGGCATTGGCGGAGGTTCTTCAGCGATAAGCTCCATGACCTTGTGGAGG
GAGAACTGGACATCGCCCCTCCCTTCCCCGAGTGGGCCGGCCCGCACACG
CCCCCTACCGCCTCCGCCGCCGCCGCCGGGCGCAGCAACATTGACGGCAA
CCGCTCCTCCTCCTCCTCCTCCTCCTCCGGTCCCGGCGGCCGCGGCGGCG
TTGGCACGTGGGTCTCCCGCCTGTGGCCGTTGAGCAACGCCTCGGCCGAC
AAGGGGATCTACAGCGACGAGGAAGAGGAGGCATTGGCGGAG
back to top