mRNA_S-ischiensis_contig14.3303.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig14.3303.1
Unique NamemRNA_S-ischiensis_contig14.3303.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig14.3303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig14contigS-ischiensis_contig14:1549820..1552083 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size2266
Cds size2262
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815719.2476494-CDS-S-ischiensis_contig14:1549819..15520811622815719.2476494-CDS-S-ischiensis_contig14:1549819..1552081Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1549820..1552081 +
1695739873.228252-CDS-S-ischiensis_contig14:1549819..15520811695739873.228252-CDS-S-ischiensis_contig14:1549819..1552081Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 1549820..1552081 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig14.3303.1prot_S-ischiensis_contig14.3303.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig14 1549820..1552081 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig14.3303.1

>prot_S-ischiensis_contig14.3303.1 ID=prot_S-ischiensis_contig14.3303.1|Name=mRNA_S-ischiensis_contig14.3303.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=754bp
NSGGGGEWHSCLTSDRARDPDFAPSWLDMGQELGRGGTMGVYVVHPWSPF
SDERAEGLTLGVVSRAPGAGFLVTVLRARPEDSKTPRLGVEKEKTVALPV
SHVPLQQARCVMDGQRAVFGHAAAGGGGQVTVVSLNPSRPDAAAGFRLPP
CESVGGVALVPMGGANDAQRGAWVMVWSNAGLYRVDLTDQTPPVHNGRHD
DAAAIARRALVAGANEDGRDTHALLRWLIYWRGPGNNGQRDRPSEAASAS
ALSLEHFLMGEEPVYHYDPAMAARLLQEHGLVNLALRAGIARGTLPTMLD
ALAAVSWLPGLGSEDVRVVCEAGWGSELVRAGGGVLLSSLPPHLSVRVLL
SGREIIFGDSGGDGVPAIAMAGGLKQHLAPLLSTLSNEELTLIAVQLARW
SCDRPAAAADGSADPPATALAEVLEVELTSLLFLSNNAAMGSERRAIRQR
LGCIGMFDGTLNAAGGGVVGGELTGTRDWHAAAVAVRGVLEEEGVQRYGA
GAGGAAAAQRSLLRALALVYRLVDPAFLILLAQDLENWSVAALALQLAGR
GTDAVATCMVGLMTLLEEEAGPHKKKLILQARSPPPAAGEPSFRLVSRET
ASSYILWVVRHMVLKHRDTLESASMLAQALCVWHHFNLPLAPMENLLEEK
LSPLAPVLAALYFPQHDRPGEDGRRGGPSATQTALVRALPFSPRFYLALL
QACTGIAQPPAAQATAPPGESVWRCLQEHHRAWGELSGITCVGDVGGGGG
PSVP
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mRNA from alignment at S-ischiensis_contig14:1549820..1552083+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig14.3303.1 ID=mRNA_S-ischiensis_contig14.3303.1|Name=mRNA_S-ischiensis_contig14.3303.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2264bp|location=Sequence derived from alignment at S-ischiensis_contig14:1549820..1552083+ (Schizocladia ischiensis KU_0333)
AACAGCGGGGGCGGGGGTGAGTGGCACTCCTGCCTGACCTCAGACCGAGC
CCGGGATCCCGATTTTGCACCTTCATGGCTGGACATGGGCCAAGAGCTCG
GCAGGGGGGGAACGATGGGCGTGTATGTAGTGCACCCATGGTCGCCCTTT
TCTGACGAGCGGGCCGAAGGCCTTACCCTCGGGGTTGTGTCACGAGCCCC
GGGCGCGGGGTTCTTGGTGACCGTTCTGCGGGCCCGGCCAGAAGACTCCA
AGACGCCGCGGCTTGGTGTGGAGAAGGAGAAGACCGTCGCCCTACCGGTG
TCGCACGTCCCACTGCAGCAGGCTCGCTGTGTGATGGATGGGCAGCGGGC
TGTGTTTGGCCACGCTGCTGCCGGTGGGGGCGGGCAGGTCACGGTGGTGA
GCCTCAACCCCTCTAGGCCCGACGCTGCTGCAGGTTTCCGACTCCCCCCA
TGCGAGAGTGTGGGGGGGGTCGCTCTGGTGCCCATGGGCGGGGCCAACGA
TGCTCAACGGGGTGCGTGGGTTATGGTTTGGAGCAACGCCGGTTTGTACC
GCGTGGACCTCACAGATCAGACGCCGCCCGTCCATAACGGCAGGCACGAC
GACGCGGCCGCAATAGCCAGGCGCGCGCTCGTTGCCGGCGCGAACGAGGA
CGGTCGAGACACCCACGCCCTCCTGCGGTGGCTGATCTATTGGCGGGGGC
CGGGCAACAACGGGCAGCGTGATCGCCCCTCCGAGGCTGCATCTGCTTCT
GCGCTGTCCCTGGAGCACTTCCTCATGGGCGAAGAGCCCGTGTACCACTA
CGACCCCGCCATGGCGGCGAGGCTGCTGCAGGAGCACGGCCTGGTCAACC
TGGCCCTGCGGGCTGGCATAGCCCGCGGCACCCTGCCCACCATGCTGGAC
GCCCTCGCGGCAGTGTCTTGGCTGCCCGGCCTGGGGAGCGAGGATGTCCG
TGTGGTGTGTGAAGCCGGCTGGGGCTCCGAGCTCGTGCGCGCAGGAGGCG
GGGTCCTGTTGAGCTCCTTGCCGCCGCACTTGAGCGTGCGTGTGCTGCTG
TCCGGCCGAGAAATAATTTTTGGCGACAGTGGCGGGGACGGGGTCCCGGC
GATCGCCATGGCGGGCGGCCTCAAGCAGCACCTGGCGCCGCTGCTGTCCA
CCCTGTCCAACGAGGAGCTCACCTTGATCGCCGTTCAGCTCGCCCGGTGG
TCCTGCGACCGCCCCGCGGCCGCGGCCGACGGCTCTGCCGATCCGCCGGC
CACGGCCCTCGCGGAGGTGCTGGAGGTGGAGCTAACCTCCCTGCTTTTCC
TCAGCAACAATGCCGCGATGGGGAGCGAACGGAGGGCGATCCGGCAGAGG
CTGGGGTGCATCGGAATGTTTGACGGCACGCTCAACGCCGCCGGCGGAGG
GGTGGTGGGGGGTGAGCTGACCGGAACCCGGGACTGGCATGCAGCGGCGG
TGGCCGTGCGGGGCGTGCTCGAGGAGGAGGGCGTGCAGCGTTACGGGGCC
GGGGCGGGCGGGGCGGCCGCGGCGCAGAGGAGTCTGCTGCGAGCCTTGGC
CCTCGTCTACCGTCTGGTAGATCCGGCCTTTCTCATCCTGCTAGCGCAGG
ATCTCGAAAATTGGTCGGTGGCGGCTCTTGCGCTGCAGCTGGCGGGGCGG
GGCACGGATGCGGTGGCGACGTGCATGGTCGGGCTCATGACCCTGCTGGA
GGAAGAGGCGGGGCCGCACAAGAAGAAGCTCATCCTGCAGGCCCGATCCC
CTCCGCCTGCCGCCGGCGAACCCAGCTTCCGCTTGGTAAGCCGGGAGACG
GCGTCCTCATACATCCTGTGGGTTGTGCGGCACATGGTCTTGAAGCACCG
GGACACCCTGGAGAGCGCGTCCATGCTGGCCCAAGCCCTGTGTGTGTGGC
ACCACTTCAATCTGCCCCTGGCCCCCATGGAAAACTTACTGGAGGAGAAG
CTGTCCCCACTGGCCCCTGTACTAGCCGCTCTATACTTTCCCCAGCACGA
CAGGCCTGGGGAGGATGGGCGGCGCGGGGGACCCAGTGCAACCCAAACCG
CGCTTGTGCGGGCTCTGCCTTTTTCCCCCCGTTTCTACCTCGCCCTGTTG
CAGGCGTGCACGGGGATTGCGCAGCCACCGGCCGCGCAGGCCACGGCACC
CCCGGGCGAGTCGGTGTGGCGATGTTTGCAAGAGCACCATCGCGCTTGGG
GGGAGTTGTCGGGCATCACGTGCGTTGGTGACGTGGGGGGCGGGGGGGGT
CCGTCCGTTCCGGC
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Coding sequence (CDS) from alignment at S-ischiensis_contig14:1549820..1552083+

>mRNA_S-ischiensis_contig14.3303.1 ID=mRNA_S-ischiensis_contig14.3303.1|Name=mRNA_S-ischiensis_contig14.3303.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=4524bp|location=Sequence derived from alignment at S-ischiensis_contig14:1549820..1552083+ (Schizocladia ischiensis KU_0333)
AACAGCGGGGGCGGGGGTGAGTGGCACTCCTGCCTGACCTCAGACCGAGC
CCGGGATCCCGATTTTGCACCTTCATGGCTGGACATGGGCCAAGAGCTCG
GCAGGGGGGGAACGATGGGCGTGTATGTAGTGCACCCATGGTCGCCCTTT
TCTGACGAGCGGGCCGAAGGCCTTACCCTCGGGGTTGTGTCACGAGCCCC
GGGCGCGGGGTTCTTGGTGACCGTTCTGCGGGCCCGGCCAGAAGACTCCA
AGACGCCGCGGCTTGGTGTGGAGAAGGAGAAGACCGTCGCCCTACCGGTG
TCGCACGTCCCACTGCAGCAGGCTCGCTGTGTGATGGATGGGCAGCGGGC
TGTGTTTGGCCACGCTGCTGCCGGTGGGGGCGGGCAGGTCACGGTGGTGA
GCCTCAACCCCTCTAGGCCCGACGCTGCTGCAGGTTTCCGACTCCCCCCA
TGCGAGAGTGTGGGGGGGGTCGCTCTGGTGCCCATGGGCGGGGCCAACGA
TGCTCAACGGGGTGCGTGGGTTATGGTTTGGAGCAACGCCGGTTTGTACC
GCGTGGACCTCACAGATCAGACGCCGCCCGTCCATAACGGCAGGCACGAC
GACGCGGCCGCAATAGCCAGGCGCGCGCTCGTTGCCGGCGCGAACGAGGA
CGGTCGAGACACCCACGCCCTCCTGCGGTGGCTGATCTATTGGCGGGGGC
CGGGCAACAACGGGCAGCGTGATCGCCCCTCCGAGGCTGCATCTGCTTCT
GCGCTGTCCCTGGAGCACTTCCTCATGGGCGAAGAGCCCGTGTACCACTA
CGACCCCGCCATGGCGGCGAGGCTGCTGCAGGAGCACGGCCTGGTCAACC
TGGCCCTGCGGGCTGGCATAGCCCGCGGCACCCTGCCCACCATGCTGGAC
GCCCTCGCGGCAGTGTCTTGGCTGCCCGGCCTGGGGAGCGAGGATGTCCG
TGTGGTGTGTGAAGCCGGCTGGGGCTCCGAGCTCGTGCGCGCAGGAGGCG
GGGTCCTGTTGAGCTCCTTGCCGCCGCACTTGAGCGTGCGTGTGCTGCTG
TCCGGCCGAGAAATAATTTTTGGCGACAGTGGCGGGGACGGGGTCCCGGC
GATCGCCATGGCGGGCGGCCTCAAGCAGCACCTGGCGCCGCTGCTGTCCA
CCCTGTCCAACGAGGAGCTCACCTTGATCGCCGTTCAGCTCGCCCGGTGG
TCCTGCGACCGCCCCGCGGCCGCGGCCGACGGCTCTGCCGATCCGCCGGC
CACGGCCCTCGCGGAGGTGCTGGAGGTGGAGCTAACCTCCCTGCTTTTCC
TCAGCAACAATGCCGCGATGGGGAGCGAACGGAGGGCGATCCGGCAGAGG
CTGGGGTGCATCGGAATGTTTGACGGCACGCTCAACGCCGCCGGCGGAGG
GGTGGTGGGGGGTGAGCTGACCGGAACCCGGGACTGGCATGCAGCGGCGG
TGGCCGTGCGGGGCGTGCTCGAGGAGGAGGGCGTGCAGCGTTACGGGGCC
GGGGCGGGCGGGGCGGCCGCGGCGCAGAGGAGTCTGCTGCGAGCCTTGGC
CCTCGTCTACCGTCTGGTAGATCCGGCCTTTCTCATCCTGCTAGCGCAGG
ATCTCGAAAATTGGTCGGTGGCGGCTCTTGCGCTGCAGCTGGCGGGGCGG
GGCACGGATGCGGTGGCGACGTGCATGGTCGGGCTCATGACCCTGCTGGA
GGAAGAGGCGGGGCCGCACAAGAAGAAGCTCATCCTGCAGGCCCGATCCC
CTCCGCCTGCCGCCGGCGAACCCAGCTTCCGCTTGGTAAGCCGGGAGACG
GCGTCCTCATACATCCTGTGGGTTGTGCGGCACATGGTCTTGAAGCACCG
GGACACCCTGGAGAGCGCGTCCATGCTGGCCCAAGCCCTGTGTGTGTGGC
ACCACTTCAATCTGCCCCTGGCCCCCATGGAAAACTTACTGGAGGAGAAG
CTGTCCCCACTGGCCCCTGTACTAGCCGCTCTATACTTTCCCCAGCACGA
CAGGCCTGGGGAGGATGGGCGGCGCGGGGGACCCAGTGCAACCCAAACCG
CGCTTGTGCGGGCTCTGCCTTTTTCCCCCCGTTTCTACCTCGCCCTGTTG
CAGGCGTGCACGGGGATTGCGCAGCCACCGGCCGCGCAGGCCACGGCACC
CCCGGGCGAGTCGGTGTGGCGATGTTTGCAAGAGCACCATCGCGCTTGGG
GGGAGTTGTCGGGCATCACGTGCGTTGGTGACGTGGGGGGCGGGGGGGGT
CCGTCCGTTCCGAACAGCGGGGGCGGGGGTGAGTGGCACTCCTGCCTGAC
CTCAGACCGAGCCCGGGATCCCGATTTTGCACCTTCATGGCTGGACATGG
GCCAAGAGCTCGGCAGGGGGGGAACGATGGGCGTGTATGTAGTGCACCCA
TGGTCGCCCTTTTCTGACGAGCGGGCCGAAGGCCTTACCCTCGGGGTTGT
GTCACGAGCCCCGGGCGCGGGGTTCTTGGTGACCGTTCTGCGGGCCCGGC
CAGAAGACTCCAAGACGCCGCGGCTTGGTGTGGAGAAGGAGAAGACCGTC
GCCCTACCGGTGTCGCACGTCCCACTGCAGCAGGCTCGCTGTGTGATGGA
TGGGCAGCGGGCTGTGTTTGGCCACGCTGCTGCCGGTGGGGGCGGGCAGG
TCACGGTGGTGAGCCTCAACCCCTCTAGGCCCGACGCTGCTGCAGGTTTC
CGACTCCCCCCATGCGAGAGTGTGGGGGGGGTCGCTCTGGTGCCCATGGG
CGGGGCCAACGATGCTCAACGGGGTGCGTGGGTTATGGTTTGGAGCAACG
CCGGTTTGTACCGCGTGGACCTCACAGATCAGACGCCGCCCGTCCATAAC
GGCAGGCACGACGACGCGGCCGCAATAGCCAGGCGCGCGCTCGTTGCCGG
CGCGAACGAGGACGGTCGAGACACCCACGCCCTCCTGCGGTGGCTGATCT
ATTGGCGGGGGCCGGGCAACAACGGGCAGCGTGATCGCCCCTCCGAGGCT
GCATCTGCTTCTGCGCTGTCCCTGGAGCACTTCCTCATGGGCGAAGAGCC
CGTGTACCACTACGACCCCGCCATGGCGGCGAGGCTGCTGCAGGAGCACG
GCCTGGTCAACCTGGCCCTGCGGGCTGGCATAGCCCGCGGCACCCTGCCC
ACCATGCTGGACGCCCTCGCGGCAGTGTCTTGGCTGCCCGGCCTGGGGAG
CGAGGATGTCCGTGTGGTGTGTGAAGCCGGCTGGGGCTCCGAGCTCGTGC
GCGCAGGAGGCGGGGTCCTGTTGAGCTCCTTGCCGCCGCACTTGAGCGTG
CGTGTGCTGCTGTCCGGCCGAGAAATAATTTTTGGCGACAGTGGCGGGGA
CGGGGTCCCGGCGATCGCCATGGCGGGCGGCCTCAAGCAGCACCTGGCGC
CGCTGCTGTCCACCCTGTCCAACGAGGAGCTCACCTTGATCGCCGTTCAG
CTCGCCCGGTGGTCCTGCGACCGCCCCGCGGCCGCGGCCGACGGCTCTGC
CGATCCGCCGGCCACGGCCCTCGCGGAGGTGCTGGAGGTGGAGCTAACCT
CCCTGCTTTTCCTCAGCAACAATGCCGCGATGGGGAGCGAACGGAGGGCG
ATCCGGCAGAGGCTGGGGTGCATCGGAATGTTTGACGGCACGCTCAACGC
CGCCGGCGGAGGGGTGGTGGGGGGTGAGCTGACCGGAACCCGGGACTGGC
ATGCAGCGGCGGTGGCCGTGCGGGGCGTGCTCGAGGAGGAGGGCGTGCAG
CGTTACGGGGCCGGGGCGGGCGGGGCGGCCGCGGCGCAGAGGAGTCTGCT
GCGAGCCTTGGCCCTCGTCTACCGTCTGGTAGATCCGGCCTTTCTCATCC
TGCTAGCGCAGGATCTCGAAAATTGGTCGGTGGCGGCTCTTGCGCTGCAG
CTGGCGGGGCGGGGCACGGATGCGGTGGCGACGTGCATGGTCGGGCTCAT
GACCCTGCTGGAGGAAGAGGCGGGGCCGCACAAGAAGAAGCTCATCCTGC
AGGCCCGATCCCCTCCGCCTGCCGCCGGCGAACCCAGCTTCCGCTTGGTA
AGCCGGGAGACGGCGTCCTCATACATCCTGTGGGTTGTGCGGCACATGGT
CTTGAAGCACCGGGACACCCTGGAGAGCGCGTCCATGCTGGCCCAAGCCC
TGTGTGTGTGGCACCACTTCAATCTGCCCCTGGCCCCCATGGAAAACTTA
CTGGAGGAGAAGCTGTCCCCACTGGCCCCTGTACTAGCCGCTCTATACTT
TCCCCAGCACGACAGGCCTGGGGAGGATGGGCGGCGCGGGGGACCCAGTG
CAACCCAAACCGCGCTTGTGCGGGCTCTGCCTTTTTCCCCCCGTTTCTAC
CTCGCCCTGTTGCAGGCGTGCACGGGGATTGCGCAGCCACCGGCCGCGCA
GGCCACGGCACCCCCGGGCGAGTCGGTGTGGCGATGTTTGCAAGAGCACC
ATCGCGCTTGGGGGGAGTTGTCGGGCATCACGTGCGTTGGTGACGTGGGG
GGCGGGGGGGGTCCGTCCGTTCCG
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