mRNA_S-ischiensis_contig14.3229.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig14.3229.1 vs. uniprot
Match: A0A6H5L7F0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F0_9PHAE) HSP 1 Score: 206 bits (524), Expect = 1.350e-60 Identity = 90/138 (65.22%), Postives = 110/138 (79.71%), Query Frame = 1
Query: 52 GRVREVVVANTHLLFPHDRLFSILRIREVKKLLGFLECYLQVHDLHHVPIILCGDFNGRIKGRVYEYLCDKGFRCAYEDSLGEGADFGKWISHRNHRGEELGVDYIWFLNPHTRQGPLETGWEKLVYQSTRTRILSKY 465
G REVVVANTHLLFPH R + ILRIRE++KLL FLECY + +DL H+P++LCGDFNGR GRVY +L ++GFRC+YED LG GAD +WI+H NHRGEE+GVDYIWF NP R P+E WE +VYQST+ ++LS Y
Sbjct: 240 GDRREVVVANTHLLFPHARTYEILRIRELRKLLAFLECYTRTNDLAHLPVVLCGDFNGRSSGRVYRHLAERGFRCSYEDMLGPGADTSRWITHLNHRGEEVGVDYIWFRNPDPRLEPMEPAWESIVYQSTKQQLLSSY 377
BLAST of mRNA_S-ischiensis_contig14.3229.1 vs. uniprot
Match: D7G0H3_ECTSI (Carbon catabolite repressor protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H3_ECTSI) HSP 1 Score: 169 bits (427), Expect = 9.180e-47 Identity = 80/145 (55.17%), Postives = 101/145 (69.66%), Query Frame = 1
Query: 52 GRVREVVVANTHLLFPHDRLFSILRIREVKKLLGFLECYLQVHDLHHVPIILCGDFNGRIKGRVYEYLCDKGFRCAYEDSLGEGADFGKWISHRNHRGEELGVDYIWFLNPHTRQGPLETGWEKLVYQSTRTRILSKYSPPVDPP 486
G REVVVANTHLLFPH RL+ + + + +DL H+P++LCGDFNGR GRVY +L ++GFRC+YE +LG GAD +WI+H NHRGEELGVDYIWF NP R P+E WE +VYQST+ ++LS Y P +PP
Sbjct: 198 GDRREVVVANTHLLFPHARLW-----------VDWSLVANETNDLAHLPVVLCGDFNGRSSGRVYRHLAERGFRCSYEVTLGPGADISRWITHLNHRGEELGVDYIWFRNPDPRLEPMEPAWESIVYQSTKQQLLSSY--PDEPP 329
BLAST of mRNA_S-ischiensis_contig14.3229.1 vs. uniprot
Match: A0A2H9ZTF1_9ASPA (Putative calcium-binding protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZTF1_9ASPA) HSP 1 Score: 137 bits (346), Expect = 1.760e-35 Identity = 63/139 (45.32%), Postives = 91/139 (65.47%), Query Frame = 1
Query: 61 REVVVANTHLLFPHDRLFSILRIREVKKLLGFLECYLQVHDLHHVPIILCGDFNGRIKGRVYEYLCDKGFRCAYEDS---LGEGADFGKWISHRNHRGEELGVDYIWFLNPHTRQGPLETGWEKLVYQSTRTRILSKYS 468
+E+++ NTHLLFPHD I+R+ +V K+L ++E YL+ H L +P+ILCGD+NG +G VY++L +GF +Y+ + AD KW+SHRNHRG GVD+IW LNP Q PL T W + V+ T+ +L + S
Sbjct: 191 QEILIVNTHLLFPHDYTLCIVRLHQVYKILQYVESYLREHKLKPIPVILCGDWNGSKRGHVYKFLRSQGFVSSYDVAHQYSDSDADAHKWVSHRNHRGNICGVDFIWLLNPSKCQKPLRTSWIEAVFGITKVHLLYQAS 329
BLAST of mRNA_S-ischiensis_contig14.3229.1 vs. uniprot
Match: UPI0019298DE2 (uncharacterized calcium-binding protein At1g02270-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0019298DE2) HSP 1 Score: 137 bits (344), Expect = 3.190e-35 Identity = 59/138 (42.75%), Postives = 93/138 (67.39%), Query Frame = 1
Query: 52 GRVREVVVANTHLLFPHDRLFSILRIREVKKLLGFLECYLQVHDLHHVPIILCGDFNGRIKGRVYEYLCDKGFRCAYEDS---LGEGADFGKWISHRNHRGEELGVDYIWFLNPHTRQGPLETGWEKLVYQSTRTRIL 456
G ++++++ NTHL+FPHD + I+R+R+V K+L +++ Y + HD + VPIILCGD+NG +G VY++L +GF +Y+ + AD KW+SHRNHRG GVD+IW LNP+ + PL+ W + V+ + +L
Sbjct: 184 GTLKQILIVNTHLMFPHDHSYCIIRLRQVYKILQYVDTYQKEHDANLVPIILCGDWNGSKRGHVYKFLRSQGFVSSYDAAHCYTDGDADAHKWVSHRNHRGNICGVDFIWLLNPNKHRKPLKCSWNEAVFGIIKNLLL 321
BLAST of mRNA_S-ischiensis_contig14.3229.1 vs. uniprot
Match: UPI001929ED3E (uncharacterized calcium-binding protein At1g02270-like isoform X1 n=3 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929ED3E) HSP 1 Score: 135 bits (340), Expect = 8.760e-35 Identity = 59/127 (46.46%), Postives = 89/127 (70.08%), Query Frame = 1
Query: 61 REVVVANTHLLFPHDRLFSILRIREVKKLLGFLECYLQVHDLHHVPIILCGDFNGRIKGRVYEYLCDKGFRCAYEDS---LGEGADFGKWISHRNHRGEELGVDYIWFLNPHTRQGPLETGWEKLVY 432
+++++ NTHLLFPHD + I+R+R+V K+L ++E Y Q H+L +PI+LCGD+NG +G VY++L +GF +Y+ + AD +W+SHRNHRG GVD+IW LNP+ + PLET W + V+
Sbjct: 164 QQILIVNTHLLFPHDCSYCIVRLRQVYKILQYVEAYQQEHNLTPMPIMLCGDWNGSKRGHVYKFLRSQGFVSSYDTAHCYTDSDADAHRWVSHRNHRGNICGVDFIWLLNPNKHRKPLETTWNEAVF 290
BLAST of mRNA_S-ischiensis_contig14.3229.1 vs. uniprot
Match: YC22_ARATH (Uncharacterized calcium-binding protein At1g02270 n=11 Tax=Camelineae TaxID=980083 RepID=YC22_ARATH) HSP 1 Score: 135 bits (341), Expect = 1.040e-34 Identity = 60/132 (45.45%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 61 REVVVANTHLLFPHDRLFSILRIREVKKLLGFLECYLQVHDLHHVPIILCGDFNGRIKGRVYEYLCDKGFRCAYEDSLG-EGADFGKWISHRNHRGEELGVDYIWFLNPHTRQGPLETGWEKLVYQSTRTRI 453
+EV++ NTHLLFPHD SI+R+ +V K+L +LE Y + + L+H+PIILCGD+NG +G VY++L +GF +Y+D+ +D +W+SHRNHRG GVD+IW NP + PL T W + V+ + ++
Sbjct: 209 QEVIIVNTHLLFPHDSSLSIVRLHQVYKILEYLEAYQKENKLNHMPIILCGDWNGSKRGHVYKFLRSQGFISSYDDAHQYTDSDAHRWVSHRNHRGNICGVDFIWLCNPSDSRKPLRTSWVEAVFSIIKYQL 340
BLAST of mRNA_S-ischiensis_contig14.3229.1 vs. uniprot
Match: A0A7G2DS85_ARATH ((thale cress) hypothetical protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A7G2DS85_ARATH) HSP 1 Score: 135 bits (341), Expect = 1.040e-34 Identity = 60/132 (45.45%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 61 REVVVANTHLLFPHDRLFSILRIREVKKLLGFLECYLQVHDLHHVPIILCGDFNGRIKGRVYEYLCDKGFRCAYEDSLG-EGADFGKWISHRNHRGEELGVDYIWFLNPHTRQGPLETGWEKLVYQSTRTRI 453
+EV++ NTHLLFPHD SI+R+ +V K+L +LE Y + + L+H+PIILCGD+NG +G VY++L +GF +Y+D+ +D +W+SHRNHRG GVD+IW NP + PL T W + V+ + ++
Sbjct: 209 QEVIIVNTHLLFPHDSSLSIVRLHQVYKILEYLEAYQKENKLNHMPIILCGDWNGSKRGHVYKFLRSQGFISSYDDAHQYTDSDAHRWVSHRNHRGNICGVDFIWLCNPSDSRKPLRTSWVEAVFSIIKYQL 340
BLAST of mRNA_S-ischiensis_contig14.3229.1 vs. uniprot
Match: A0A1J3IHM2_NOCCA (Putative calcium-binding protein n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IHM2_NOCCA) HSP 1 Score: 133 bits (334), Expect = 1.090e-34 Identity = 60/132 (45.45%), Postives = 89/132 (67.42%), Query Frame = 1
Query: 61 REVVVANTHLLFPHDRLFSILRIREVKKLLGFLECYLQVHDLHHVPIILCGDFNGRIKGRVYEYLCDKGFRCAYEDSLG-EGADFGKWISHRNHRGEELGVDYIWFLNPHTRQGPLETGWEKLVYQSTRTRI 453
+EV++ NTHLLFPHD SI+R+ +V K+L +LE Y Q + L H+PIILCGD+NG +G VY++L +GF +Y+ + +D +W+SHRNHRG GVD+IW NP+ + PL T W + V+ + ++
Sbjct: 63 QEVLIVNTHLLFPHDSSLSIVRLHQVYKILEYLEAYQQENKLTHMPIILCGDWNGSKRGHVYKFLRSQGFISSYDVAHQYTDSDAHRWVSHRNHRGNICGVDFIWLCNPNNSRKPLRTSWVEAVFSIIKYQL 194
BLAST of mRNA_S-ischiensis_contig14.3229.1 vs. uniprot
Match: A0A1J3D143_NOCCA (Putative calcium-binding protein (Fragment) n=3 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D143_NOCCA) HSP 1 Score: 133 bits (334), Expect = 2.060e-34 Identity = 60/132 (45.45%), Postives = 89/132 (67.42%), Query Frame = 1
Query: 61 REVVVANTHLLFPHDRLFSILRIREVKKLLGFLECYLQVHDLHHVPIILCGDFNGRIKGRVYEYLCDKGFRCAYEDSLG-EGADFGKWISHRNHRGEELGVDYIWFLNPHTRQGPLETGWEKLVYQSTRTRI 453
+EV++ NTHLLFPHD SI+R+ +V K+L +LE Y Q + L H+PIILCGD+NG +G VY++L +GF +Y+ + +D +W+SHRNHRG GVD+IW NP+ + PL T W + V+ + ++
Sbjct: 229 QEVLIVNTHLLFPHDSSLSIVRLHQVYKILEYLEAYQQENKLTHMPIILCGDWNGSKRGHVYKFLRSQGFISSYDVAHQYTDSDAHRWVSHRNHRGNICGVDFIWLCNPNNSRKPLRTSWVEAVFSIIKYQL 360
BLAST of mRNA_S-ischiensis_contig14.3229.1 vs. uniprot
Match: A0A834ZTC0_9MAGN (EF-hand domain-containing protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834ZTC0_9MAGN) HSP 1 Score: 133 bits (335), Expect = 4.130e-34 Identity = 59/127 (46.46%), Postives = 89/127 (70.08%), Query Frame = 1
Query: 61 REVVVANTHLLFPHDRLFSILRIREVKKLLGFLECYLQVHDLHHVPIILCGDFNGRIKGRVYEYLCDKGFRCAYEDS---LGEGADFGKWISHRNHRGEELGVDYIWFLNPHTRQGPLETGWEKLVY 432
+EV++ NTHLLFPH+ +SI+R+ +V K+L ++E Y + + L+ +PIILCGD+NG +G VY++L +GF +Y+ + AD KW+SHRNHRG GVD+IW LNP+ + PL+T W + V+
Sbjct: 157 QEVLIVNTHLLFPHNSSYSIIRLHQVYKILQYVESYQKENKLNPIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDSDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKPLKTSWSEAVF 283 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig14.3229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig14.3229.1 >prot_S-ischiensis_contig14.3229.1 ID=prot_S-ischiensis_contig14.3229.1|Name=mRNA_S-ischiensis_contig14.3229.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=164bp EGDEAASANARRRRRRRGRVREVVVANTHLLFPHDRLFSILRIREVKKLLback to top mRNA from alignment at S-ischiensis_contig14:847396..851528- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig14.3229.1 ID=mRNA_S-ischiensis_contig14.3229.1|Name=mRNA_S-ischiensis_contig14.3229.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4133bp|location=Sequence derived from alignment at S-ischiensis_contig14:847396..851528- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig14:847396..851528- >mRNA_S-ischiensis_contig14.3229.1 ID=mRNA_S-ischiensis_contig14.3229.1|Name=mRNA_S-ischiensis_contig14.3229.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=984bp|location=Sequence derived from alignment at S-ischiensis_contig14:847396..851528- (Schizocladia ischiensis KU_0333)back to top |