mRNA_S-ischiensis_contig13.3133.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig13.3133.1
Unique NamemRNA_S-ischiensis_contig13.3133.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig13.3133.1 vs. uniprot
Match: D8LNX4_ECTSI (ATP-dependent protease peptidase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNX4_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 8.330e-85
Identity = 141/200 (70.50%), Postives = 159/200 (79.50%), Query Frame = 1 
Query:  136 AGAVRPSARSS----LHSRAPDHAGWHGTTIVCVRKAGKVVMMGDGQVSVGDMVIKPNAKKVRRLGDG-IMAGYAGSTADAFTLIERLESKLEANPGQLTRACVELATDWRTDKYLRRLEAVLLVADSAVSFKLTGQGDVLEPYDGVMAVGSGQPYALAAARALMGQADLSAQEVAQRAMEITSELCVYTNSSFMMEVLD 720
            A AV P  +S+    +HS A      HGTTI+CVRK GKVVMMGDGQVS GDMV+KPNA KVR+LGDG ++AGYAGSTADA TL+ERLE KLE + GQL  ACV LA DWRTDKYLRRLEAV+LVADS  S K+TG GDVL P  GV+AVGSGQPYALAAARAL GQ DLSA+EVA+++MEI SELCVYTN+ F M  LD
Sbjct:    5 AAAVLPFGKSAESKRMHSSASSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEGQLMNACVALAKDWRTDKYLRRLEAVVLVADSKFSLKVTGLGDVLAPNGGVIAVGSGQPYALAAARALSGQEDLSAEEVARKSMEIASELCVYTNNHFTMHSLD 204
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BLAST of mRNA_S-ischiensis_contig13.3133.1 vs. uniprot
Match: A0A7S2WBX0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBX0_9STRA)

HSP 1 Score: 256 bits (654), Expect = 3.720e-83
Identity = 128/180 (71.11%), Postives = 153/180 (85.00%), Query Frame = 1 
Query:  181 APDHAGWHGTTIVCVRKAGKVVMMGDGQVSVGDMVIKPNAKKVRRLGDGIMAGYAGSTADAFTLIERLESKLEANPGQLTRACVELATDWRTDKYLRRLEAVLLVADSAVSFKLTGQGDVLEPYDGVMAVGSGQPYALAAARALMGQADLSAQEVAQRAMEITSELCVYTNSSFMMEVLD 720
            A D +G HGTTI+CVRK GKVV++GDGQVS G MV+KPNAKKVRR+GDG++ G+AGSTADAFTL+ERLE +LE +PGQLTRACV+LA  WRTDKYLRRLEAVLLVAD  VSF+LTG GDVLEP DG+MAVGSG  YALAAARAL    D+  +++AQ+AM I ++LCVYTN +F +EVL+
Sbjct:   28 AADGSGRHGTTILCVRKEGKVVVIGDGQVSQGSMVVKPNAKKVRRMGDGVLVGFAGSTADAFTLLERLEERLEEHPGQLTRACVDLAKAWRTDKYLRRLEAVLLVADKDVSFELTGNGDVLEPKDGIMAVGSGGAYALAAARALADVPDMDPEDIAQKAMTIAADLCVYTNHNFTVEVLE 207
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BLAST of mRNA_S-ischiensis_contig13.3133.1 vs. uniprot
Match: A0A6G0WXK0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXK0_9STRA)

HSP 1 Score: 246 bits (629), Expect = 1.460e-79
Identity = 125/193 (64.77%), Postives = 156/193 (80.83%), Query Frame = 1 
Query:  142 AVRPSARSSLHSRAPDHAGWHGTTIVCVRKAGKVVMMGDGQVSVGDMVIKPNAKKVRRLGDGIMAGYAGSTADAFTLIERLESKLEANPGQLTRACVELATDWRTDKYLRRLEAVLLVADSAVSFKLTGQGDVLEPYDGVMAVGSGQPYALAAARALMGQADLSAQEVAQRAMEITSELCVYTNSSFMMEVLD 720
            A RP A   L S        HGTTI+CVRK GKVV++GDGQVS+G  ++KPNA+KVRR+ D ++AG+AGSTADAFTLIERLESKLE  PGQLTRACVELA  WRTDKYLR LEA+L+V D+  SF LTG GDVL+P+DG++ +GSG  YALAAARAL+ +  LSA+EVA+R+M+I +++C+YTN +F+MEVLD
Sbjct:    9 ATRPGALP-LRSHFSSSPTMHGTTILCVRKNGKVVVIGDGQVSLGHTIVKPNAQKVRRINDNVIAGFAGSTADAFTLIERLESKLEEYPGQLTRACVELAKAWRTDKYLRALEALLIVTDNKQSFTLTGNGDVLQPHDGIIGIGSGGTYALAAARALIEEPHLSAEEVARRSMKIAADICIYTNHNFVMEVLD 200
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BLAST of mRNA_S-ischiensis_contig13.3133.1 vs. uniprot
Match: A0A2A4U280_9PROT (ATP-dependent protease subunit HslV n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2A4U280_9PROT)

HSP 1 Score: 241 bits (614), Expect = 1.320e-77
Identity = 123/175 (70.29%), Postives = 146/175 (83.43%), Query Frame = 1 
Query:  199 WHGTTIVCVRKAGKVVMMGDGQVSVGDMVIKPNAKKVRRLGDG-IMAGYAGSTADAFTLIERLESKLEANPGQLTRACVELATDWRTDKYLRRLEAVLLVADSAVSFKLTGQGDVLEPYDGVMAVGSGQPYALAAARALMGQADLSAQEVAQRAMEITSELCVYTNSSFMMEVLD 720
            WHGTTI+ VRKA  V+M+GDGQV++GD VIK  A+KVRRLGDG ++AG+AG+TADAFTL ERLE+KLE  P QLTRACVELA DWRTD+YLRRLEA++LVAD  VS  LTGQGDVLEP DGVMA+GSG  YALAAARAL  Q ++SA+++  RAM I SE+CVYTN +F ME +D
Sbjct:    9 WHGTTILSVRKANSVIMIGDGQVTLGDTVIKGGARKVRRLGDGSVIAGFAGATADAFTLFERLEAKLEQYPKQLTRACVELAKDWRTDRYLRRLEAMMLVADKEVSLTLTGQGDVLEPDDGVMAIGSGGNYALAAARALFPQDEVSAEDICTRAMTIASEICVYTNGNFTMEKID 183
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BLAST of mRNA_S-ischiensis_contig13.3133.1 vs. uniprot
Match: A0A485LKE5_9STRA (Aste57867_22011 protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485LKE5_9STRA)

HSP 1 Score: 241 bits (614), Expect = 2.940e-77
Identity = 125/199 (62.81%), Postives = 158/199 (79.40%), Query Frame = 1 
Query:  130 LSAGAVRPSARSSLHS--RAPDHAGWHGTTIVCVRKAGKVVMMGDGQVSVGDMVIKPNAKKVRRLGDGIMAGYAGSTADAFTLIERLESKLEANPGQLTRACVELATDWRTDKYLRRLEAVLLVADSAVSFKLTGQGDVLEPYDGVMAVGSGQPYALAAARALMGQADLSAQEVAQRAMEITSELCVYTNSSFMMEVLD 720
            L+  A R  A    HS   AP     HGTTI+CVRK GKVV++GDGQVS+G  ++KPNA+KVRR+ + ++AG+AGSTADAFTLIERLESKLE  PGQLTRACVELA  WRTDKYLR LEA+L+V D+  SF LTG GDVL+P+DG++ +GSG  YALAAARAL+ +  LSA+EVA+R+M+I +++CVYTN + ++EVLD
Sbjct:    5 LATAAARHGALPLRHSFSSAPT---MHGTTILCVRKNGKVVVIGDGQVSLGHTIVKPNAQKVRRINENVIAGFAGSTADAFTLIERLESKLEEYPGQLTRACVELAKAWRTDKYLRALEALLIVTDNKQSFTLTGNGDVLQPHDGIIGIGSGGTYALAAARALIDEPHLSAEEVARRSMKIAADICVYTNHNVVVEVLD 200
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BLAST of mRNA_S-ischiensis_contig13.3133.1 vs. uniprot
Match: W7UCI7_9STRA (Heat shock protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UCI7_9STRA)

HSP 1 Score: 242 bits (618), Expect = 4.530e-77
Identity = 131/215 (60.93%), Postives = 158/215 (73.49%), Query Frame = 1 
Query:  115 SIGWPLSAGAVRPSARSSLHSRAP-----------DHAG---WHGTTIVCVRKAGKVVMMGDGQVSVGDMVIKPNAKKVRRLGDGIMAGYAGSTADAFTLIERLESKLEANPGQLTRACVELATDWRTDKYLRRLEAVLLVADSAVSFKLTGQGDVLEPYDGVMAVGSGQPYALAAARALMGQADLSAQEVAQRAMEITSELCVYTNSSFMMEVL 717
            SI W   A    P     LH  A            DHAG    H TTI+CVRK  KVVMMGDGQVS G  V+KPNAKKVRRLG+ I+AG+AGSTAD FTL+ERLE KLE +PGQLTRACV+LA  WRTDKYLRRLEA LLVAD  VSF++TG GDVLEP DGV+A+GSG  +ALAAA+AL+ + D+ A+++A +AM I +E+CVYTN++F+ EV+
Sbjct:   42 SINWDTDASG--PGGCRRLHQAAALRHPRSGFYGGDHAGHLTMHATTILCVRKGDKVVMMGDGQVSQGATVVKPNAKKVRRLGEDIIAGFAGSTADCFTLMERLERKLEEHPGQLTRACVDLAKAWRTDKYLRRLEASLLVADKNVSFEITGLGDVLEPKDGVIAIGSGGTFALAAAKALLDREDMDAEQIAHKAMSIAAEICVYTNNNFVTEVV 254
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BLAST of mRNA_S-ischiensis_contig13.3133.1 vs. uniprot
Match: A0A7S2D616_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D616_9STRA)

HSP 1 Score: 241 bits (615), Expect = 4.570e-77
Identity = 124/202 (61.39%), Postives = 158/202 (78.22%), Query Frame = 1 
Query:  142 AVRPSARSSLHSRA----PDHAGWHGTTIVCVRKAGKVVMMGDGQVSVGDMVIKPNAKKVRRLGDGIMAGYAGSTADAFTLIERLESKLEANPGQLTRACVELATDWRTDKYLRRLEAVLLVADSAVSFKLTGQGDVLEPYD-----GVMAVGSGQPYALAAARALMGQADLSAQEVAQRAMEITSELCVYTNSSFMMEVLD 720
            A RPS+ + + +RA    PD   WHGTTI+CVRK GK V++GDGQVS G +V+KPNAKKVRRL  G++AG+AGSTADAFTL+ERLE +LE +PGQLTRACV+LA  WRTDKYLRRLEAVLLV DS V+F++TG GDVLEP +      VM VGSG  YAL+AARAL     + A+ +A+++ME+ +++CVYTN +F++E LD
Sbjct:   16 AARPSSMAGMATRAFGGAPD---WHGTTILCVRKEGKTVLIGDGQVSQGSIVVKPNAKKVRRLEGGVLAGFAGSTADAFTLLERLEERLEEHPGQLTRACVDLAKAWRTDKYLRRLEAVLLVCDSKVAFEITGNGDVLEPRETEGGVSVMGVGSGGAYALSAARALADMPGVDAETIARKSMEVAADMCVYTNHNFVIETLD 214
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BLAST of mRNA_S-ischiensis_contig13.3133.1 vs. uniprot
Match: UPI00115E9A24 (ATP-dependent protease subunit HslV n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115E9A24)

HSP 1 Score: 239 bits (609), Expect = 6.880e-77
Identity = 122/174 (70.11%), Postives = 146/174 (83.91%), Query Frame = 1 
Query:  199 WHGTTIVCVRKAGKVVMMGDGQVSVGDMVIKPNAKKVRRLGDG-IMAGYAGSTADAFTLIERLESKLEANPGQLTRACVELATDWRTDKYLRRLEAVLLVADSAVSFKLTGQGDVLEPYDGVMAVGSGQPYALAAARALMGQADLSAQEVAQRAMEITSELCVYTNSSFMMEVL 717
            WHGTTI+CVRK GKVV+ GDGQVS+G  VIK NA+KVRRLGDG ++ G+AG+TADAFTL ERLE+KLE  PGQLTRACVELA DWRTD+YLRRLEA++ VAD++VS  LTG GDVLEP DGV+ +GSG  YALAAARALM   DL A+ VA+RAM+I +E+CVYTN + ++E L
Sbjct:    9 WHGTTILCVRKGGKVVIAGDGQVSLGQTVIKSNARKVRRLGDGSVIGGFAGATADAFTLFERLEAKLEQYPGQLTRACVELAKDWRTDRYLRRLEAMMAVADASVSLVLTGTGDVLEPEDGVIGIGSGGNYALAAARALMTVEDLDAETVARRAMKIAAEICVYTNHNVVVESL 182
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BLAST of mRNA_S-ischiensis_contig13.3133.1 vs. uniprot
Match: A0A4D9D968_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D968_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.480e-76
Identity = 119/172 (69.19%), Postives = 145/172 (84.30%), Query Frame = 1 
Query:  202 HGTTIVCVRKAGKVVMMGDGQVSVGDMVIKPNAKKVRRLGDGIMAGYAGSTADAFTLIERLESKLEANPGQLTRACVELATDWRTDKYLRRLEAVLLVADSAVSFKLTGQGDVLEPYDGVMAVGSGQPYALAAARALMGQADLSAQEVAQRAMEITSELCVYTNSSFMMEVL 717
            H TTI+CVRK  KVVMMGDGQVS G  V+KPNAKKVRRLG  I+AG+AGSTAD FTL+ERLE KLE +PGQLTRACV+LA  WRTDKYLRRLEA LLVAD  VSF++TG GDVLEP DGV+A+GSG  +ALAAA+AL+ + D+ A+++A +AM I +E+CVYTN++F+ EV+
Sbjct:    2 HATTILCVRKGDKVVMMGDGQVSQGATVVKPNAKKVRRLGQDIIAGFAGSTADCFTLMERLERKLEEHPGQLTRACVDLAKAWRTDKYLRRLEASLLVADKNVSFEITGLGDVLEPKDGVIAIGSGGTFALAAAKALLDREDMDAEQIAHKAMSIAAEICVYTNNNFVTEVV 173
[Close]
BLAST of mRNA_S-ischiensis_contig13.3133.1 vs. uniprot
Match: A0A8D5WMG4_9PROT (ATP-dependent protease subunit HslV n=1 Tax=Alphaproteobacteria bacterium SO-S41 TaxID=2829083 RepID=A0A8D5WMG4_9PROT)

HSP 1 Score: 237 bits (605), Expect = 3.520e-76
Identity = 123/183 (67.21%), Postives = 148/183 (80.87%), Query Frame = 1 
Query:  175 SRAPDHAGWHGTTIVCVRKAGKVVMMGDGQVSVGDMVIKPNAKKVRRLGDG-IMAGYAGSTADAFTLIERLESKLEANPGQLTRACVELATDWRTDKYLRRLEAVLLVADSAVSFKLTGQGDVLEPYDGVMAVGSGQPYALAAARALMGQADLSAQEVAQRAMEITSELCVYTNSSFMMEVLD 720
            S + D A WHGTTIV VRK GKVV+ GDGQVS+G  +IK NA+KVRRLG G ++ G+AG+TADAFTL ERLE+KLE  PG LTRACVELA DWRTD+YLRRLEA+++VAD +VS  LTGQGDVLEP DGV+ +GSG  YALAAARAL+ Q DL A+ +A+RAMEI + +CVYTN +  +E LD
Sbjct:    6 SASDDKANWHGTTIVSVRKGGKVVIAGDGQVSMGQTIIKGNARKVRRLGKGDVIVGFAGATADAFTLFERLEAKLETYPGNLTRACVELAKDWRTDRYLRRLEALMVVADKSVSLLLTGQGDVLEPEDGVIGIGSGGNYALAAARALVDQ-DLPAEAIARRAMEIAARICVYTNGNVTLEALD 187
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig13.3133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNX4_ECTSI8.330e-8570.50ATP-dependent protease peptidase subunit n=2 Tax=E... [more]
A0A7S2WBX0_9STRA3.720e-8371.11Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6G0WXK0_9STRA1.460e-7964.77Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2A4U280_9PROT1.320e-7770.29ATP-dependent protease subunit HslV n=1 Tax=Rhodos... [more]
A0A485LKE5_9STRA2.940e-7762.81Aste57867_22011 protein n=5 Tax=Aphanomyces TaxID=... [more]
W7UCI7_9STRA4.530e-7760.93Heat shock protein n=1 Tax=Nannochloropsis gaditan... [more]
A0A7S2D616_9STRA4.570e-7761.39Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
UPI00115E9A246.880e-7770.11ATP-dependent protease subunit HslV n=1 Tax=Telmat... [more]
A0A4D9D968_9STRA1.480e-7669.19Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8D5WMG4_9PROT3.520e-7667.21ATP-dependent protease subunit HslV n=1 Tax=Alphap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig13contigS-ischiensis_contig13:2921494..2928983 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.2
Seed ortholog evalue4.9e-67
Seed eggNOG ortholog2880.D8LNX4
Preferred nameHslV
KEGG koko:K01419
GOsGO:0000002,GO:0000266,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006264,GO:0006508,GO:0006725,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008233,GO:0009058,GO:0009059,GO:0009295,GO:0009376,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0031597,GO:0031974,GO:0032042,GO:0032991,GO:0033955,GO:0034641,GO:0034645,GO:0042623,GO:0042645,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048285,GO:0070011,GO:0070013,GO:0070581,GO:0071704,GO:0071840,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901576,GO:1902494,GO:1904949,GO:1905368,GO:1905369
EggNOG free text desc.Proteasome subunit
EggNOG OGs2RS9W@2759,COG5405@1
EC3.4.25.2
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionATP-dependent protease, HslV subunit
Ec32 orthologEc-08_005470.1
Exons7
Model size721
Cds size720
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815697.067801-CDS-S-ischiensis_contig13:2921493..29215501622815697.067801-CDS-S-ischiensis_contig13:2921493..2921550Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2921494..2921550 -
1695739858.7052011-CDS-S-ischiensis_contig13:2921493..29215501695739858.7052011-CDS-S-ischiensis_contig13:2921493..2921550Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2921494..2921550 -
1622815697.0802615-CDS-S-ischiensis_contig13:2922757..29228251622815697.0802615-CDS-S-ischiensis_contig13:2922757..2922825Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2922758..2922825 -
1695739858.7271612-CDS-S-ischiensis_contig13:2922757..29228251695739858.7271612-CDS-S-ischiensis_contig13:2922757..2922825Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2922758..2922825 -
1622815697.0904672-CDS-S-ischiensis_contig13:2923451..29234811622815697.0904672-CDS-S-ischiensis_contig13:2923451..2923481Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2923452..2923481 -
1695739858.7352474-CDS-S-ischiensis_contig13:2923451..29234811695739858.7352474-CDS-S-ischiensis_contig13:2923451..2923481Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2923452..2923481 -
1622815697.1016657-CDS-S-ischiensis_contig13:2924119..29242041622815697.1016657-CDS-S-ischiensis_contig13:2924119..2924204Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2924120..2924204 -
1695739858.7491345-CDS-S-ischiensis_contig13:2924119..29242041695739858.7491345-CDS-S-ischiensis_contig13:2924119..2924204Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2924120..2924204 -
1622815697.111639-CDS-S-ischiensis_contig13:2925199..29252701622815697.111639-CDS-S-ischiensis_contig13:2925199..2925270Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2925200..2925270 -
1695739858.7573938-CDS-S-ischiensis_contig13:2925199..29252701695739858.7573938-CDS-S-ischiensis_contig13:2925199..2925270Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2925200..2925270 -
1622815697.123138-CDS-S-ischiensis_contig13:2925649..29258151622815697.123138-CDS-S-ischiensis_contig13:2925649..2925815Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2925650..2925815 -
1695739858.767517-CDS-S-ischiensis_contig13:2925649..29258151695739858.767517-CDS-S-ischiensis_contig13:2925649..2925815Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2925650..2925815 -
1622815697.1399148-CDS-S-ischiensis_contig13:2928740..29289831622815697.1399148-CDS-S-ischiensis_contig13:2928740..2928983Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2928741..2928983 -
1695739858.7777977-CDS-S-ischiensis_contig13:2928740..29289831695739858.7777977-CDS-S-ischiensis_contig13:2928740..2928983Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 2928741..2928983 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig13.3133.1prot_S-ischiensis_contig13.3133.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig13 2921494..2928983 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig13.3133.1

>prot_S-ischiensis_contig13.3133.1 ID=prot_S-ischiensis_contig13.3133.1|Name=mRNA_S-ischiensis_contig13.3133.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=240bp
MVARRAGATVPGLSMLGSARRGLLRGIDLATGRYGGRGSIGWPLSAGAVR
PSARSSLHSRAPDHAGWHGTTIVCVRKAGKVVMMGDGQVSVGDMVIKPNA
KKVRRLGDGIMAGYAGSTADAFTLIERLESKLEANPGQLTRACVELATDW
RTDKYLRRLEAVLLVADSAVSFKLTGQGDVLEPYDGVMAVGSGQPYALAA
ARALMGQADLSAQEVAQRAMEITSELCVYTNSSFMMEVLD
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mRNA from alignment at S-ischiensis_contig13:2921494..2928983-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig13.3133.1 ID=mRNA_S-ischiensis_contig13.3133.1|Name=mRNA_S-ischiensis_contig13.3133.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7490bp|location=Sequence derived from alignment at S-ischiensis_contig13:2921494..2928983- (Schizocladia ischiensis KU_0333)
ATGGTTGCCAGGCGCGCGGGCGCGACGGTGCCTGGCTTGTCGATGCTTGG
CAGCGCGAGGCGGGGGCTGCTCAGAGGCATCGACCTCGCCACTGGCCGGT
ATGGGGGTCGCGGTAGCATTGGCTGGCCGTTGAGCGCAGGAGCGGTTCGC
CCAAGCGCCCGCAGCAGTCTCCATTCCAGGGCCCCGGATCATGCTGGATG
GCACGGGACGACCATTGTTTGTGTGCGCAAGGCGGGCAAGGTGGTGAGTT
TTTCTCGTGCTTGCTGCTGGACGGGAGTGCAACTGGCCTTGCCTTGCCGC
CTGGGAGTGTTGCCAAATGCCTGGGGCTAAAAGCCGGCTAAGCACGCACG
GTTAGGGGCAACAGCTGACGAGTGCATGTGTGGGTATATCTGTTTGTCAC
ATCACATCGCATGTGATGTGATGTGGTGTGATGTCAAACTGCAGCGAATT
AGAGCGCACATTACATCGCATCGCATCACATTGCATCAAATGGCAGCGTA
CATATGTATATGTGCACATATATGTACTTCCAAGTATATATGTATTGTCA
AGCGATGCCATCCCGACGTTTCCTGTCCTGTTCCGTGCATTAGGCCCAAT
TTCATGTGATATCCGCACTGGACGTGTTGGTTTGTCCTCCGGCATGGCCT
TGCGTGCTTCGCCGACTGTAATCTTAGCCCTACGTACGGTAATACACGTC
GGGTTCGCCCTCCGACAGGAGGGCCAGCTGTTTAGCCGTAGACTCCGCCT
AGTTCGATGCGATGTGATATGATGTGATGTGTAGTCTAACGTACTTGTAG
ATTACAGTGGTCGAAGTTGGTGCAGACGTCATTATTACACCACACCGTAC
GGCAGCCCGGAACTTCCCAAGGCTGTGCCCAATGTTTGTCAAGCCGGCGA
GTGTGCCCCTGATAGGTTGAGCCGAGCCCCGGCGGCTCGACAGGCGGTAT
ATCGGCTAGCACACGTGCAATACTCTTACGAGTACAGAACTACCGTACTG
CCAGTACTACTGTACCTACAGTAGATTACAGTACCTACACTACAGTACAG
CAGTACAGCTCTGGTGAGGCAATCAGTGACGTGGCCTGCACACCTCACCC
TGTGTTCTTCTTCGCAATACAGTACGATTACGTACTGCCCCCCCTCCTAC
CATTTCTCCCCTTCCCCACACAAACTTCCCCTGGCGAGCTATAAGGAAGG
GCCACTGTTGAGGTCTTTCGTGGCATGGGCTGCACTTTGCCCTGTGTTGT
TCCTGATAATACTGCAGAATCGCCCCGCTACGTGCCCCCCTTGCCCCCCC
CCCGCAATGCGAAACGCCTGCGGAGGTGACGATAATTTCGGCGGCCAACC
AAAAGCCGGCATGCCCCGCTGCTTGTCCCATTCAAGCCCCAGATCGCCCC
GCGGCGCGCCCATCTCGGCAGTGGTGGAATATTGAATATTTAAATATATA
CAACAAAACGTTATATCGAATAAATATGACGATCACTGCATATATCGATG
TTATATCGACTGATGTATTCTTATTATTAAGTTTGAGCACGTCAGGATGA
CCTGGGCAAACGCCTCCCATGGAAGAAACTACTTGGTTTTAGTATGGGCT
ACAATATCACTGTGTCCATATATCGACATATATAACAAAGTCGTTATATC
GATACATGTGTCAATATATATATGACAAATCGGGTCGATATTCCATCACT
GCATCTCGGCCGCAATGTACAACGAACGCACAGCAGTGATCGATTATCGA
TCGAGGTAGATAGTTTTCGGGCTCGACTGATTTTGTGGGTGGCGTTCCGA
AATACTTACCCACACCAAATTTCCCCTGGCGAGCTATTGTAGGGAAGGGC
CACTGCTGAGGTCTTTAGTGACATGCCCTGCACCTCACCCTGTGCTGTTC
CTGTTAGTACTAACTACTTGGATTTAGTGTGGGTCAAACTATTAAATATC
GACTACAAACCGATAGATACTTCGTATATACTCTAGATGAGTACCTGCTG
TCGATAAATAGGCTGATTTGCACAGATATTCCATCGCTGCCACAACAGGT
GATGATGGGCGATGGGCAGGTGAGCGTCGGGGACATGGTGATCAAGCCCA
AACTATCGAATATTGACTATCGATAGATGAATAGATCAGTGCTGTCGATA
AACAGGTTGATTTGCTTAGATATTCCATCGCTATCGCTGCCGCAGCGCAG
GTGATGATGGGCGATGGGCAGGTGAGCGTCGGGGACATGGTGATAGAGCA
CATAGATCAGTGCTGTCGATAAAAATATGTTGATTTGCTTAGATATTCCA
TCGCTATCGCTGCCGCACAGGTGATTGTCGATAGATATACAGATCAGCAC
TTCACCTAGCCTTTGGTGTGATGTCCGTGGCTCTCTGGCGCTGGCCACGC
CATTGTGACGTTGGCTTCGTGTTCGTTAGAGTTCGTTCTCTGTGGTCACC
TGGCTCGTGCGCGGTATACACCGTGGCATTTGCTCACACTCTCTTATCTA
CGTGCGCTCCTACAGGTACGTCGTGGTCTCGGTGTTCGTGTCTGGTCTCG
CCCCCACCCGCCCTACCTGCATGCCCCACTTTGAGCACAAGAGACTCCCT
TTCCCCGCCCTTTCCTTTTCCCTGCCCCGCCCCGTTCCTTCTTTATATTT
TGTTTTCTTTTTGCCCTGCGAGGGAAAGAAGGGCTTCGTTGCGTCCCGTT
TCGGGACGAGCCTTTTGGTGCGGGGCCTGGAACTCGCCGCTTATCTACCA
CTAGAAATGGATCAGCATTGCCGGTCAATAGGTTGATTTGCTTACACGAT
ATTCCATCGCTATTGCTGCCGCACAAGCGATGATGGGCGATGGGCAGGTG
AGCGTTGGGGACATGTTGATCACGCCCAATCTATTGAATATCCACTATCG
ATAGATAGATGGATATAGACCAGCGGAATAAGGGCTTCGTTGAGTCCCGT
CTCGGGACGAGCCTTTTGGCACGGGGCCTGGAACTTGCCGCTTATCTACC
GCTCAAAATAGAGCAATACTGTCGATAAATAGGTCGTTTACTTAGATTTC
CATCGCTATCGTCCTGCTCCTTCTCGCACGAGGCGCGGGGTCCATGGTCT
CGGGACTACGGCAAGCACCACGTGAGTACATATATATGTGTATATATATA
TATATCGCTGCCGCACAGGTGATGATGGGCGATGGGCAGGTGAGCGTCGG
GGACATGGTGATCAAGCCCAACGCCAAGAAGGTGCGGCGCCTGGGGGACG
GCATCATGGCGGGCTACGCGGGCTCCACCGCGGACGCCTTCACGCTGATT
GAACGCCTGGAGTCCAAGCTGGAGGCGAACCCGGGTGGGCAGCGCAAATG
CGTACTTCGAAGTGTGCACACATGGCGGGAGGGGGGAAAGGAGATGAGGA
CGCAGAGAGAGAGACAGATAGACAGACGGAGACACACACACATAGCGAGA
GGGGGGGGGACAGATGACGACGCAGAGAGAGAGACAGAGGCAGAGAGGGA
GATGGGGAGGGGGGGGGGGTGAAAGGGGGGGGGGGGGGCTCTCACACGCT
GGTGATATGTGCACGCGCGCACGCGCGCGTGCACAAACACACACGTCCCG
GTCTCTCACGCGCAACAATGCAAACGCACACACACGCGCGCGGACCCAAG
CGCGCGCGCGCGCACACACACACACAAACACAGACACATGACACGCCGTG
TTCTGTGGTGCAGGGCAACTGACACGAGCATGCGTGGAGCTGGCGACGGA
CTGGCGGACCGACAAGTACCTCAGGCGGCTTGAGGTGAGTGTGTTGGATT
TTGCAATAGTCTAGTAGTTAGGGGACCACTTTTCGAGATATCCAAGTAGT
TCAGGGAAGTGAGTTTCGAGGTAGGTATCAAGTACTTAAGGTAGCTGAGT
TTCCGAATACTCTACAGTAGTAGTGTAGTTATCCCCACCCAAATTTCCCC
TGGCGGGCTATACGGAAGGGCCACTTCTGAGGTCTATAGTGACGTGGCCT
GCACTTCGCCCTGTGTTGTTCCTGTTAGCGCTGTATTTAGGAGACTGATT
TTCAAGACAGGACCAGAGGCCATGTGGCGTATGTGTTGTTTTGCCGTGAC
GGATACGGATGTTGTGACACTTGCAATGTGACGGTATCACCACTGATGTT
CTGACACTTGCAGCGTACTTCGAAGTAGTGGGATCACTACGGATGTTGCG
ACACGTGCTGTGTAATGGGATCACTCCTGATGCCCTGGCGCTTGCAATGT
GATGGGATCTCCCTCCTGCTGTTCTTGCGCTTGCAATGCGATGGGATCTC
ACTCCTGAGGTTCTGACACGTTCAATGTGACGGGGCCACTCCTGAGGTTC
TGACGCTTTCAATGTGATGGTATCAGGGTTGGCACTTAGCCCCTAGGTGG
TGCCACTTTTGGGCCCTGAATTAGATGTAATTAGGGGCAATTAGACCTAA
AATGAAGACTGATTAGGCCCTTATTAACCCCCAAGTGCCGACCCTGGTGA
TGAGGGGTGGTGGCAATGGGCGAGGGTTGGGATGGGGCCGGTGCCAATCA
GTGATGGAATATCGATCAGCAGATAGTTATCGGGCTCGGCTGATTTTGGG
GTGGCGTTGCTATTAGCTCCCTTGCGCAGGCGGTGCTGCTGGTGGCGGAC
TCCACGGTGTCCTTCAAGCTCACCGGGCAGGGGGATGTGTAGTTAGGGGT
GATTAGACCTACAATGAAGACTGAATAGGCCCTAGGTTACCCCTAGGTGC
CAACCCTGTCACCCCCTCACCTTGCGCAGGCGGTGCTGCTGGTGGCGGAC
TCTGCGGTGTCCTTCAAGCTCACGGGGCAGGGGGATGTCTTGGAGCCCTA
CGACGGAGTCATGGGTGGGTGTGGTGTGATTGGGTGGGATGCGATGCGAT
TATGTGTATGCGAGTATGTGTATGTCATGCGGTGTGATGTGATCTGATGG
GATGGGATGGAATGCGATGAGTATGTGTACGTGCTGCGATGCGATGGGAT
GTGATGGGATGGGATGGGATGCGATACGAGTATATATATGTGATGTGGTG
CGATGTGATGTGATGTCCCAACTACCGTGCTGTAGAGTGCACATCACATC
CATCAGGATGATACCGCGTGTGATGTGATGTGATGTCAAAACAGCAAGGA
AGCAGGCCTGTGCGGCCAGGTACATACAACATCATTTGGTGAGACGATTG
TGATGTGATGTGATTTGAAACTACGGTTCGGTACTGCGCTCTACATTGCT
CGGGAGTAACAGCCGCGGACATAAATTCTTAAAACTCCAGTGCACTAAAC
TTTCAATTATCCCTCCCCCCTTCCTCCCCCGCTGCCACTTGTCTACTCTC
CCTGTGGCCAAACTGGGGATAATCACCCGCTTCTCCTGGGATATTGGCAT
GCGTGCGTGCGTGCATGCGTGCGTGTGTGTGTGCGTGCGTGCGTGCGTGC
GTGCGTGCGTGCGTGCGTGCGTGTGTGCGTGCCCCCCTGGCCGGCGTCGC
AGCTGTGGGGTCGGGACAGCCGTACGCTCTGGGTGAGTCAGGTTGTGTGG
TGTGCGTGCGTGCGTGTGTGTGTGTGTGTTCGTGCGTGCGTGCGTGCCTG
TGTGTGTGTGTGTGTGTGTGTGTCACAGGCCGTGATGTGATGTGATGTGA
TGTGACGTGATGTGATTTGATGTGGCGTGATGTGATGTCAGTCATGTCAT
GTACCACTATGAAGTTTGCAATCGCGTATTTTATGTGTGTGTGTGTGTTT
GTGTGTGTGACACGGGTGCCGCAAACAAGTTATTCGCAGCAGTGCAGTTT
GGACATTGCATCATGTCACATCTTCGGTGTGCATGTGTTTGTGTGTGTGT
AGCGTTGCTTGTTTTTGCGTGTGTATTCCTTCCGTCCTCAGCTAGCGTGC
CCCCTGGTCGACTGACCAACACCTTGAGCCAATCAACTCGTGCTTACAAC
ATTGTCCACCAATGAAATCTGTTTACCCAGTTTTCTCAACCAATCACATT
GACCGAACCCTGCCATCTCTGCCCATCAACTCGCGAGTAACCCCCGGATG
CCGCCATCTCTCCTCTTCCCTCCCTCCCTCTCTCTCTCTCTCTCCCTCCC
TCCCTGTGTATGTCTGTCTCGTCCGCTGTGGAAACTGTAATCTAACTGTG
TTTTTCAGCCGCTGCCCGCGCTCTCATGGGTCAAGCTGACTTGAGTGCCC
AAGAGGTAGCGCAGAGGGCGATGGAGGTGAGAGAGGGGGGGGGGGAGAGA
GAGAGAGAGAATGGGAGAGAGGAGGGACAACAAGTGATAGAGAATGACTG
TCATTAGAGAATGTGGCGACGGTTATAGTAGTAGTCCCGGCCTACCTAAT
TGGGATGCGAGAGTCCATGGCTCAATAGCTACTTCTGTCGGAGGGCAAAC
CCGAAGTTTCGACTTGCGGTAGGGCTGTCGGCAATGCACGCAGGGCTATG
TCGCAGGCCAAGCCAATGTACATGGTATTAGAGAATTTAAATCTCTTGTA
AGTATATATCTAGCTACTTGGAAGCATGTCTGTATCTACTGTACATACTC
ACCCCCAACCCCCCCCAAACAAAAACGGTTTGCCAGCCCGACCCCCCCCC
CTCCCCAAAAGTTTGATCGCCGTCTGCGTCTACTTCGAAGCACATGCATA
TGAGTATGATACACAATATGTTACGATGGACCCGCGCAGGTAGACGTGTT
GGGTTGGGGGACAACGGCCTCCTCGCCGACCTCGCCCACCACTGCGATAG
CCACTAATACGAGAACACTCAATTCTTGAAGGGGATAACCACTAATACGG
GAATACTCAATGTCACATGCGTGCGATTGTACCTCGTTACATTTTTTTTG
AAATTATTGTGAGAGATGTGAGTTCCGGGCCCCGTCCCCAACAACCTAAG
GTGGGGACCTCACCAGAAGCGCTTCTTTTCACCGCATGGCACAAAAATCA
GCAAAGAAGCCACAGAGTGGGGCAATGCAGGGGGATCTCTCTCGTGCCGC
GTTGGGCATACCTGTGAGAGTATGCACACATTGAAGTAGCGAACAGCGGG
ACATCCGCAAGTGCGACGACGAGTACCTACCCCACACTAGCAACGTGACC
ATGAGAGAGTACCTAGAGGTGTTCTACGCGAGGGGGGGGGGCAAATCGCC
CGGTTCCTTACATGTCACCGCTTCGGCTTTCCAGCCCTAACTCGAGAACA
AATGCGAATTGGCGTGTGACAGTATGTACGTCGTCTGGCCGTATCGTCAT
GCACACGTTGGCAAAGTTTCACGCTGCAATTCGAAGTGGTTCCGAGAACA
GGGTGAGCGGGGGCCGCCGCGCATGCAAGGTTCCCACCCCCCGCCTCGCG
TAGAACGCCTCCTACACTAGTCAATCAATTATATGAATCACTCGCCCACC
ACCGCGCCACCGCTGCCCCCCTTCCTTCCCCAGATAACGTCGGAGCTGTG
CGTGTATACCAACTCCTCCTTCATGATGGAGGTATTGGAC
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Coding sequence (CDS) from alignment at S-ischiensis_contig13:2921494..2928983-

>mRNA_S-ischiensis_contig13.3133.1 ID=mRNA_S-ischiensis_contig13.3133.1|Name=mRNA_S-ischiensis_contig13.3133.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1440bp|location=Sequence derived from alignment at S-ischiensis_contig13:2921494..2928983- (Schizocladia ischiensis KU_0333)
ATGGTTGCCAGGCGCGCGGGCGCGACGGTGCCTGGCTTGTCGATGCTTGG
CAGCGCGAGGCGGGGGCTGCTCAGAGGCATCGACCTCGCCACTGGCCGGT
ATGGGGGTCGCGGTAGCATTGGCTGGCCGTTGAGCGCAGGAGCGGTTCGC
CCAAGCGCCCGCAGCAGTCTCCATTCCAGGGCCCCGGATCATGCTGGATG
GCACGGGACGACCATTGTTTGTGTGCGCAAGGCGGGCAAGGTGATGGTTG
CCAGGCGCGCGGGCGCGACGGTGCCTGGCTTGTCGATGCTTGGCAGCGCG
AGGCGGGGGCTGCTCAGAGGCATCGACCTCGCCACTGGCCGGTATGGGGG
TCGCGGTAGCATTGGCTGGCCGTTGAGCGCAGGAGCGGTTCGCCCAAGCG
CCCGCAGCAGTCTCCATTCCAGGGCCCCGGATCATGCTGGATGGCACGGG
ACGACCATTGTTTGTGTGCGCAAGGCGGGCAAGGTGGTGATGATGGGCGA
TGGGCAGGTGAGCGTCGGGGACATGGTGATCAAGCCCAACGCCAAGAAGG
TGCGGCGCCTGGGGGACGGCATCATGGCGGGCTACGCGGGCTCCACCGCG
GACGCCTTCACGCTGATTGAACGCCTGGAGTCCAAGCTGGAGGCGAACCC
GGGTGATGATGGGCGATGGGCAGGTGAGCGTCGGGGACATGGTGATCAAG
CCCAACGCCAAGAAGGTGCGGCGCCTGGGGGACGGCATCATGGCGGGCTA
CGCGGGCTCCACCGCGGACGCCTTCACGCTGATTGAACGCCTGGAGTCCA
AGCTGGAGGCGAACCCGGGGCAACTGACACGAGCATGCGTGGAGCTGGCG
ACGGACTGGCGGACCGACAAGTACCTCAGGCGGCTTGAGGGCAACTGACA
CGAGCATGCGTGGAGCTGGCGACGGACTGGCGGACCGACAAGTACCTCAG
GCGGCTTGAGGCGGTGCTGCTGGTGGCGGACTCTGCGGTGTCCTTCAAGC
TCACGGGGCAGGGGGATGTCTTGGAGCCCTACGACGGAGTCATGGGCGGT
GCTGCTGGTGGCGGACTCTGCGGTGTCCTTCAAGCTCACGGGGCAGGGGG
ATGTCTTGGAGCCCTACGACGGAGTCATGGCTGTGGGGTCGGGACAGCCG
TACGCTCTGGCTGTGGGGTCGGGACAGCCGTACGCTCTGGCCGCTGCCCG
CGCTCTCATGGGTCAAGCTGACTTGAGTGCCCAAGAGGTAGCGCAGAGGG
CGATGGAGCCGCTGCCCGCGCTCTCATGGGTCAAGCTGACTTGAGTGCCC
AAGAGGTAGCGCAGAGGGCGATGGAGATAACGTCGGAGCTGTGCGTGTAT
ACCAACTCCTCCTTCATGATGGAGGTATTGGACATAACGTCGGAGCTGTG
CGTGTATACCAACTCCTCCTTCATGATGGAGGTATTGGAC
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