mRNA_S-ischiensis_contig13.3128.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig13.3128.1 vs. uniprot
Match: D8LLR0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR0_ECTSI) HSP 1 Score: 185 bits (469), Expect = 1.940e-51 Identity = 136/307 (44.30%), Postives = 164/307 (53.42%), Query Frame = 3
Query: 120 LEDLDTGDLVLFDRPCSQMGSLFGGLVCVGAKLLSGSTWDHVGFVVRGEDGVNMLAEASFSGVKLRPLEERVRRSSANCVCVRRLRQVGITEAQRESQRAKAREFVGEVSGHHYK-GS--LSEMLSAAITFHPAKNHRRRLHAEVVRLDEAMASLRRELWPSAPSPPPSRGHYIM----LEEELRLAERMRKQALRKLAQSERSV------------------------------------------------LEHFPEGASP----------GVFCSELVALLYQRLGLLDNAFPSSSDYTPADFA 845
LE LDTGDLVLFDRPC +MG FG +C AK++ G +DH+G VV+ E G+N++ EASFSGV +RPL ERVRRSSA+ +CVRRL Q TE RE +AR FV EVS YK GS L +M+SAA FHPAK RRR+HAE V L ++ASL +EL +A P G + +E LR A R++AL LA S + H P SP G+FCSELVA LYQRLGLLD FP+ DY PADFA
Sbjct: 21 LEGLDTGDLVLFDRPCLKMGGFFGAAICAAAKVVGGVPFDHIGVVVKDEKGLNVMVEASFSGVAVRPLCERVRRSSASQICVRRL-QAHRTEEMRE----EARRFVSEVSHLPYKEGSEGLLQMVSAAFRFHPAKEQRRRVHAETVALSASIASLEKELELTAK--PEMDGDAAVRVDATKERLRQAITRRRRALVYLAASGAAPEPSGRPXXXXXXXXXXXXXXXXXXXXXXXAPSNDSLPLRQTPIGPLAPASHTPLSPSPPPPSAEPFDGGLFCSELVAALYQRLGLLDAGFPARHDYVPADFA 320
BLAST of mRNA_S-ischiensis_contig13.3128.1 vs. uniprot
Match: A0A6H5L9T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T0_9PHAE) HSP 1 Score: 167 bits (424), Expect = 2.550e-42 Identity = 125/313 (39.94%), Postives = 157/313 (50.16%), Query Frame = 3
Query: 129 LDTGDLVLFDRPCSQMGSLFGGLVCVGAKLLSGSTWDHVGFVVRGEDGVNMLAEASFSGVKLRPLEERVRRSSANCVCVRRLRQVGITEAQRESQRAKAREFVGEVSGHHYK-GS--LSEMLSAAITFHPAKNHRRRLHAEVVRLDEAMASLRRELWPSAPSPPPSRGHYIMLEEELRLAERMRKQALR--------------------------------------------------------KLAQSERSVLEHFPEGASP---------------GVFCSELVALLYQRLGLLDNAFPSSSDYTPADFA 845
LDTGDLV FDRPC +MG FG +C AK++ G +DH+G VV+ E G+N++ EASFSGV +RPL ERVRRSSA+ +CVRRL Q TE RE +AR FV EVS YK GS L +M+SAA FHPAK RRR+HAE V L ++ASL +EL + P + G + + + ER+R+ R L + + P +P G+FCSELVA LYQRLGLLD FP+ DY PADFA
Sbjct: 10 LDTGDLVFFDRPCLKMGGFFGAAICAAAKVVGGVPFDHIGVVVKDEKGLNVMVEASFSGVAVRPLCERVRRSSASQICVRRL-QAHRTEEMRE----EARRFVSEVSHLPYKEGSEGLLQMVSAAFRFHPAKEQRRRVHAETVALSASIASLEKEL--ELIAKPETGGDAAVRVDATK--ERLRRAITRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDDSLPSRQAPIGPVAPHSHTPLSPSXXXXXAEPFDGGLFCSELVAALYQRLGLLDAGFPARHDYVPADFA 313
BLAST of mRNA_S-ischiensis_contig13.3128.1 vs. uniprot
Match: A0A4D9CVQ8_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVQ8_9STRA) HSP 1 Score: 147 bits (371), Expect = 6.860e-35 Identity = 110/245 (44.90%), Postives = 146/245 (59.59%), Query Frame = 3
Query: 120 LEDLDTGDLVLFDRPCSQMGSLFGGLVCVGAKLLSGSTWDHVGFVVR---GEDGVNMLAEASFSGVKLRPLEERVRRSSANCVCVRRLRQVGITEAQRESQRAKAREFVGEVSGHHYKGSLSEMLSAAITFHPAKNHRRRLHAEVVRLDEAMASLRRELWPSAPSPPPSRGHYIMLEEELRLAERMRKQALRKLAQSERSVLEHFPEGASPGVFCSELVALLYQRLGLLDNAFPSSSDYTPADFA 845
L LDTGDLVLF+R C MG + G VC+ AKL +DH+G VVR E G ML +A F+GV+ L+ERVRRS ++ + VRRL T A RE+ RA +V EV G+ YK S+ +M+++ + PA+ R L+ EV + +E + L+REL S P R L++ L A R R ALR L +E SV E+ E G+FCSELVA YQRLGLL +A+P+S+ Y P DFA
Sbjct: 35 LPHLDTGDLVLFNRRCGTMGPV-GAAVCLAAKLYG--RYDHLGVVVREDEAEGGRLMLIDAGFNGVQYVDLKERVRRSKSHDIAVRRLHHFTRTPALREAMRA----YVEEVRGYQYKQSILQMVASGLVT-PAQWRREMLYLEVRQWEERVQGLKRELGGSQPFTSLERR---ALDKALEEARRQRLLALRALEGAEVSVFEN-KEDMGSGLFCSELVAAAYQRLGLL-SAYPASNTYIPTDFA 266
BLAST of mRNA_S-ischiensis_contig13.3128.1 vs. uniprot
Match: A0A835ZEA6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA6_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.790e-29 Identity = 67/153 (43.79%), Postives = 98/153 (64.05%), Query Frame = 3
Query: 129 LDTGDLVLFDRPCSQMGSLFGGLVCVGAKLLSGSTWDHVGFVVRGEDGVNMLAEASFSGVKLRPLEERVRRSSANCVCVRRLRQVGITEAQRESQRAKAREFVGEVSGHHYKGSLSEMLSAAITFHPAKNHRRRLHAEVVRLDEAMASLRREL 587
LDTGD+VLF RPC +MG L G ++C+G K + + WDH+G VV+ +DG N + EA+FSGVK L R++RSSA + VRRL TE + ++ R AR++V E+ YK S ++++ A++ +PAK RR LH + RL+E + EL
Sbjct: 1 LDTGDIVLFSRPCQRMGVL-GCILCLGTKTVHATPWDHIGVVVKDKDGTNRIWEAAFSGVKHYDLHARLQRSSAYMIAVRRL----YTE-RNDAMRESARQYVAEIEQRPYKASYAQLVRVAVSQYPAKRRRRDLHRSMRRLEEDATFVESEL 147
BLAST of mRNA_S-ischiensis_contig13.3128.1 vs. uniprot
Match: M1VD17_CYAM1 (Similar to mitochondrial calcium-dependent solute carrier n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VD17_CYAM1) HSP 1 Score: 129 bits (325), Expect = 6.690e-29 Identity = 103/245 (42.04%), Postives = 134/245 (54.69%), Query Frame = 3
Query: 129 LDTGDLVLFDRPCSQMGSLFGGLVCVGAKLLSGSTWDHVGFVVRGEDGVNMLAEASFSGVKLRPLEERVRRSSANCVCVRRLRQVGITEAQRESQRAKAREFVGEVSGHHYKGSLSEMLSAAITFHPAK-NHRRRLHAEVVRLDEAMASLRRELWPSAPSPPPSRG----HYIMLEEELRLAERMRKQALRKLAQSERSVLEHFPEGASP--GVFCSELVALLYQRLGLLDNAFPSSSDYTPADF 842
LD GD+VLF+R C M L G L+C AK +S S WDHVG VVR EDG L EA+ SGV LRPL+ER+RRS +N + RRL + + E R + F +V YK L ML + I HPA R RLHA +V + REL +A + I+L+ E ++ E +R R+LA ++ F EG++ VFCSELVA YQRLGLL ++FP + Y P DF
Sbjct: 92 LDAGDIVLFNRRCLAMAPL-GALICAVAKAMSNSRWDHVGIVVRKEDGSLHLLEANLSGVTLRPLDERIRRSRSNEIAFRRLSII-----RTERFRTELLHFAEQVLETPYKNDLGAMLVSVI--HPADMQERERLHALLVSRRAQRMEVERELREAALTAFQRNSLLEQRRILLQSEEKIEEVLR----RELAATKGG----FFEGSNDLSRVFCSELVAAAYQRLGLL-SSFPPADSYVPKDF 319
BLAST of mRNA_S-ischiensis_contig13.3128.1 vs. uniprot
Match: A0A7J7IKN1_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IKN1_9RHOD) HSP 1 Score: 129 bits (323), Expect = 1.150e-28 Identity = 100/243 (41.15%), Postives = 131/243 (53.91%), Query Frame = 3
Query: 129 LDTGDLVLFDRPCSQMGSLFGGLVCVGAKLLSGSTWDHVGFVVRGEDGVNMLAEASFSGVKLRPLEERVRRSSANCVCVRRLRQVGITEAQRESQRAKAREFVGEVSGHHYKGSLSEMLSAAITFHPAK-NHRRRLHAEVVRLDEAMASLRRELWPSAPSPPPSRG----HYIMLEEELRLAERMRKQALRKLAQSERSVLEHFPEGASPGVFCSELVALLYQRLGLLDNAFPSSSDYTPADF 842
LD GD+VLF+R C M L G L+C AK +S S WDHVG VVR EDG L EA+ SGV LRPL+ER+RRS +N + RRL V +RE + F +V YK ML + I HPA R RLHA +V + REL +A + ++L+ E ++ E +R R+LA ++ E + + VFCSELVA YQRLGLL ++FP + Y P DF
Sbjct: 90 LDAGDIVLFNRRCLAMAPL-GALICAVAKAMSNSRWDHVGIVVRKEDGSLHLLEANLSGVTLRPLDERIRRSRSNEIAFRRLSIVRTDRFRRELEH-----FAEQVLETPYKNDFGAMLVSVI--HPADMQERERLHALLVSRHAQRMEVERELREAALTAFQRNSLMEQRRLLLQSEEKIEEVLR----RELAAAKGGYFEGSNDLSR--VFCSELVAAAYQRLGLL-SSFPPADSYVPKDF 317
BLAST of mRNA_S-ischiensis_contig13.3128.1 vs. uniprot
Match: M2Y5W0_GALSU (Mitochondrial carrier n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5W0_GALSU) HSP 1 Score: 123 bits (309), Expect = 7.700e-27 Identity = 98/247 (39.68%), Postives = 126/247 (51.01%), Query Frame = 3
Query: 129 LDTGDLVLFDRPCSQMGSLFGGLVCVGAKLLSGSTWDHVGFVVRGEDGVNMLAEASFSGVKLRPLEERVRRSSANCVCVRRLRQVGITEAQRESQRAKAREFVGEVSGHHYKGSLSEMLSAAITFHPA-KNHRRRLHAEVVRLDEAMASLRRELWPSAPSPPPSRGHYIMLEEELRLAERMRKQALRKLAQSERSVLEHFPEGASP--------GVFCSELVALLYQRLGLLDNAFPSSSDYTPADF 842
LD+GDLVLF+R C M S +G L+C +KL S S WDHVG +VR EDG L EA+ SGVKLRPLEER++RS ++ + +RRL V + E R K +FV Y+ S S +LS I P K R RLHA ++ + + EL G + AER R + ++ L +G SP VFCSELVA YQ LGLLD +P + Y P DF
Sbjct: 15 LDSGDLVLFNRRCLSM-SPYGALICGLSKLFSKSRWDHVGLIVRKEDGNLFLLEANLSGVKLRPLEERLKRSHSHEIAIRRLSIV-----RTEVFRGKLLDFVNRTINLPYETSTSSLLSTIID--PVDKQERERLHALLLEKKTQLNEIDLEL---------KEGALTAFQRRSLQAERARVAGNLEALEAR---LNQVMKGKSPFEGKEDLNRVFCSELVAAAYQHLGLLDK-YPPAGGYAPKDF 240
BLAST of mRNA_S-ischiensis_contig13.3128.1 vs. uniprot
Match: A0A485KX26_9STRA (Aste57867_12999 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KX26_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.120e-25 Identity = 89/241 (36.93%), Postives = 133/241 (55.19%), Query Frame = 3
Query: 129 LDTGDLVLFDRPCSQMGSLFGGLVCVGAKLLSGSTWDHVGFVVRGEDGVNMLAEASFSGVKLRPLEERVRRSSANCVCVRRLRQVGITEAQRESQRAKAREFVGEVSGHH--YKGSLSEMLSAAITFHPAKNHRRRLHAEVVRLDEAMASLRRELWPSAPSPPPSRGHYIMLEEELRLAERMRKQALRKLAQSERSVLEHFPEGA-SPGVFCSELVALLYQRLGLLDNAFPSSSDYTPADF 842
LDTGD+VLFDR CS M SL+GGL+C AK G+ WDH G VV+ +DG M EA+ +GVKLRPL +R+R S + V R+++V + QRA EFV V Y+ + +++A F P++ R +L ++V L M +++ ++ P + L EL+ + +L +ERSV E+ A + FCS+LVA LYQ +GLL +P+++ Y P +F
Sbjct: 25 LDTGDVVLFDRKCSAM-SLYGGLICYSAKAWGGTRWDHNGVVVKTDDGKLMFLEAAMTGVKLRPLIDRIRYSKSYEV---RIQKVEVNRTPEFRQRAA--EFVQRVIAQDIPYEDRVQVLINAGADFVPSRVAREQLFNDIVDLKRRMKTIQDDMTHRTKMSPFEQNS---LRTELQHLREQHDALVEQLDATERSVFENKASKADATRYFCSQLVAALYQHVGLL-LPYPAANSYRPHNF 255
BLAST of mRNA_S-ischiensis_contig13.3128.1 vs. uniprot
Match: W4H8U0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8U0_9STRA) HSP 1 Score: 117 bits (293), Expect = 8.980e-25 Identity = 82/244 (33.61%), Postives = 136/244 (55.74%), Query Frame = 3
Query: 126 DLDTGDLVLFDRPCSQMGSLFGGLVCVGAKLLSGSTWDHVGFVVRGEDGVNMLAEASFSGVKLRPLEERVRRSSANCVCVRRLRQVGITEAQRESQ-RAKAREFVGEVSGHH--YKGSLSEMLSAAITFHPAKNHRRRLHAEVVRLDEAMASLRRELWPSAPSPPPSRGHYIMLEEELRLAERMRKQALRKLAQSERSVLEHFPEGASPGV--FCSELVALLYQRLGLLDNAFPSSSDYTPADF 842
+LDTGD+VLFDR C+ MG ++GG++C AKL + WDH G + + +DG M EA+ +GVKLRPL +R+ S + V ++++ E R + R +A +F+ V Y+ + +++A +F P++ R + + ++V L M +++ +L + P + L EL + +L Q+ERS+ E+ P AS FCS+LVA LYQ +GLL +P+++ Y P +F
Sbjct: 20 NLDTGDVVLFDRKCNSMG-VYGGVICHSAKLFGQTRWDHNGVIYKTDDGKLMFLEAAMNGVKLRPLVDRILHSRSYEVRIQKV------EVHRTPEFRQRAADFIRRVVEQDIPYEDRIQVLVNAGASFVPSRVAREQFYHDIVDLKRHMKTIQDDLTHRSKMSPFEQNS---LRAELASLREQHDALVHQLDQTERSIFENKPSSASDPARFFCSQLVAALYQHVGLL-LPYPAATSYRPHNF 252
BLAST of mRNA_S-ischiensis_contig13.3128.1 vs. uniprot
Match: A0A024UU32_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UU32_9STRA) HSP 1 Score: 117 bits (293), Expect = 9.020e-25 Identity = 83/244 (34.02%), Postives = 137/244 (56.15%), Query Frame = 3
Query: 126 DLDTGDLVLFDRPCSQMGSLFGGLVCVGAKLLSGSTWDHVGFVVRGEDGVNMLAEASFSGVKLRPLEERVRRSSANCVCVRRLRQVGITEAQRESQ-RAKAREFVGEVSGHH--YKGSLSEMLSAAITFHPAKNHRRRLHAEVVRLDEAMASLRRELWPSAPSPPPSRGHYIMLEEELRLAERMRKQALRKLAQSERSVLEHFPEGASPGV--FCSELVALLYQRLGLLDNAFPSSSDYTPADF 842
+LDTGD+VLFDR C+ MG L+GG++C AKL + WDH G +V+ +DG M EA+ +GVKLRPL +R+ S + V ++++ E R + R +A EF+ V Y+ + +L+A +F P++ R + + ++V L + +++ ++ + P + L EL +++L Q+ERSV E+ +S FCS+LVA LYQ +GLL +P+++ Y P +F
Sbjct: 20 NLDTGDVVLFDRKCNSMG-LYGGVICHSAKLFGQTRWDHNGVIVKTDDGKLMFLEAAMNGVKLRPLIDRILYSRSYEVRIQKV------EVHRTPEFRQRAAEFIRRVIEQDIPYEDRIQVLLNAGASFVPSRMAREQFYHDIVELKRQIKTIQDDITHRSKMTPFEKNS---LRAELASLREQHDAIVQQLDQTERSVFENKAASSSDPARFFCSQLVAALYQHVGLL-LPYPAATSYRPHNF 252 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig13.3128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig13.3128.1 >prot_S-ischiensis_contig13.3128.1 ID=prot_S-ischiensis_contig13.3128.1|Name=mRNA_S-ischiensis_contig13.3128.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=365bp MEVPHGGLEDLDTGDLVLFDRPCSQMGSLFGGLVCVGAKLLSGSTWDHVGback to top mRNA from alignment at S-ischiensis_contig13:2868160..2875799- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig13.3128.1 ID=mRNA_S-ischiensis_contig13.3128.1|Name=mRNA_S-ischiensis_contig13.3128.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7640bp|location=Sequence derived from alignment at S-ischiensis_contig13:2868160..2875799- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig13:2868160..2875799- >mRNA_S-ischiensis_contig13.3128.1 ID=mRNA_S-ischiensis_contig13.3128.1|Name=mRNA_S-ischiensis_contig13.3128.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2190bp|location=Sequence derived from alignment at S-ischiensis_contig13:2868160..2875799- (Schizocladia ischiensis KU_0333)back to top |