mRNA_S-ischiensis_contig13.2966.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig13.2966.1
Unique NamemRNA_S-ischiensis_contig13.2966.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig13.2966.1 vs. uniprot
Match: D7FMX9_ECTSI (Boron transporter 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX9_ECTSI)

HSP 1 Score: 659 bits (1701), Expect = 1.630e-224
Identity = 336/500 (67.20%), Postives = 410/500 (82.00%), Query Frame = 3 
Query:  333 VKIVEAPGKGIMSDIKAKAPLYKSDITDGLNLKVLSSVFFLFFACLAPAVAFGGLLGIVTEGAMGPIEMIAGTAVSGILYALASGQPLTIIGSTGPVLAFIAVLYKTAGRLGLPFLPMYAWVGFWTAGILAACSLFSVSNMVEYFTRFTDEIFSLLISVIFILEACKDIAGGFTNPAVTFTKAVSSLVIALLTYNTATIFRGLRGTPYMVKPVREVLADFGPTIGVFSGIFAAVWAKAKYGLVLPTLNVPASFTTTIGRPWLVPVFSLPVWARFAAAVPALMASVLLFMDQNITVRLVNSKEHKLKKGYGMHLDMLMISGITAVFSALGMPWLVAATVRSLAHVKSLGVYEQKE-GK-EVIAGMTEQRVSGVAIHTLIGSSILFLRPQLARVPLAVLMGLFLYLGVSGLKGNQLFDRTKLLVTDPELRPKA-PWTTDIPMKKTNIFTLIQLACLWGMMWVKGSPIGVLFPVIIALLAPIRFALERPGWFSKKEMAILDTE 1823
            +K+VE  GKG+++DIK KAP  KSDITDG ++KVLS++FFLFFACLAPAVAFGG+LG+ T GAMG IEMIA TAV G++YA  +GQPLTIIGSTGPVLAFIAVLYKTA R+ LPFLP+Y WVGFWTAG+L   S FS+SNMV +FTRFTDEIFSLLISVIFI+EA KDI G F +  V    A S+LV+AL TY  ATI + LR T ++ KP+RE +ADF PT+GV +G  AA+W K++Y L LPTL VP++ TTT+GRPWLVP  +LPVWAR+AA  PALM++VLLFMDQNITVRLVN+K+HKLKKGYGM+LDM +I+G+TA  S  G+PWLVAATVRSLAHVKSL  Y+Q   G+ E IAG+ EQRVSG+AIH LIG +IL LRP LA++PL V  GLFLYLGV+GL GN+++DRTKLL TDP+LRPKA PW+  +P  KTN++T+IQLACL  MMWVKGSPIGVLFPV+IALLAP+R  L +   F++ ++++LD+E
Sbjct:  290 IKLVEGFGKGLLADIKGKAPFLKSDITDGFSIKVLSTIFFLFFACLAPAVAFGGMLGVATAGAMGTIEMIAATAVCGMVYAALAGQPLTIIGSTGPVLAFIAVLYKTAARMSLPFLPLYTWVGFWTAGMLGVASAFSLSNMVLFFTRFTDEIFSLLISVIFIMEATKDITGVFASAGVPLVAATSTLVVALSTYGVATILKSLRRTQFLNKPIREFIADFAPTLGVATGTLAAMWGKSRYALALPTLTVPSALTTTVGRPWLVPFMTLPVWARWAAFFPALMSTVLLFMDQNITVRLVNAKQHKLKKGYGMNLDMGIIAGLTAACSVFGLPWLVAATVRSLAHVKSLTKYDQLGWGRGERIAGVAEQRVSGIAIHGLIGVAILKLRPLLAQIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRPKAAPWSR-LPASKTNMYTMIQLACLGSMMWVKGSPIGVLFPVLIALLAPLRMLLVKTPLFTEGDLSVLDSE 788
[Close]
BLAST of mRNA_S-ischiensis_contig13.2966.1 vs. uniprot
Match: A0A835YV61_9STRA (Bicarbonate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV61_9STRA)

HSP 1 Score: 632 bits (1629), Expect = 1.410e-217
Identity = 329/506 (65.02%), Postives = 391/506 (77.27%), Query Frame = 3 
Query:  318 GAAEGVKIVEAPGKGIMSDIKAKAPLYKSDITDGLNLKVLSSVFFLFFACLAPAVAFGGLLGIVTEGAMGPIEMIAGTAVSGILYALASGQPLTIIGSTGPVLAFIAVLYKTAGRLGLPFLPMYAWVGFWTAGILAACSLFSVSNMVEYFTRFTDEIFSLLISVIFILEACKDIAGGFTNPAVTFTKAVSSLVIALLTYNTATIFRGLRGTPYMVKPVREVLADFGPTIGVFSGIFAAVWAKAKYGLV--LPTLNVPASFTTTIGRPWLVPVFSLPVWARFAAAVPALMASVLLFMDQNITVRLVNSKEHKLKKGYGMHLDMLMISGITAVFSALGMPWLVAATVRSLAHVKSLGVYEQKE--GKEVIAGMTEQRVSGVAIHTLIGSSILFLRPQLARVPLAVLMGLFLYLGVSGLKGNQLFDRTKLLVTDPELRPKAPWTTDIPMKKTNIFTLIQLACLWGMMWVKGSPIGVLFPVIIALLAPIRFALERPGWFSKKEMAILDTE 1823
            G+ EG K+VE  GKG+  DIK +AP Y SD TDGLN+K LS+ FFLFFACLAPAVAFGGL+G+ T G +G IEMIA TA  G++Y+L +GQPLTIIGSTGPVLAF AVLYKTA RLGLPFLP+YAWVG WT+ +LA  SLFS+SNMV YFTRFTDEIF  LISVIFI EA +D++G + NPAV    A+ S  +A  T+ TAT  RGLR +PY+VK  R+VLADF PTIGV +G         ++G    L TL VPA+FTTT GRPW VP+  LP WAR AA VPALM++VLLFMDQNITVRLVN++EHKLKKG+G+HLDM  I+ + A  S LG+PWLVAATVRSLAHV++L  YE+++  G E IA MTE RVSG+AIH  IG++ILFLRP LAR+PLAVLMGLFLYLG  GL+GNQ+  R  LL TDP  RP+ PW TD+ + KT++FT +QLA L  M+ VK SP GVLFPVIIALLAP+R ALER G FSK+EM +LD E
Sbjct:   20 GSHEGPKLVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGALQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGFGLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGGGEAIAAMTETRVSGLAIHAAIGAAILFLRPALARIPLAVLMGLFLYLGAGGLQGNQMAARVALLFTDPAQRPRVPWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDAE 525
[Close]
BLAST of mRNA_S-ischiensis_contig13.2966.1 vs. uniprot
Match: A0A4D9DEQ9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEQ9_9STRA)

HSP 1 Score: 594 bits (1532), Expect = 9.430e-202
Identity = 305/497 (61.37%), Postives = 381/497 (76.66%), Query Frame = 3 
Query:  336 KIVEAPGKGIMSDIKAKAPLYKSDITDGLNLKVLSSVFFLFFACLAPAVAFGGLLGIVTEGAMGPIEMIAGTAVSGILYALASGQPLTIIGSTGPVLAFIAVLYKTAGRLGLPFLPMYAWVGFWTAGILAACSLFSVSNMVEYFTRFTDEIFSLLISVIFILEACKDIAGGFTNPAVTFTKAVSSLVIALLTYNTATIFRGLRGTPYMVKPVREVLADFGPTIGVFSGIFAAVWAKAKYGLVLPTLNVPASFTTTIGRPWLVPVFSLPVWARFAAAVPALMASVLLFMDQNITVRLVNSKEHKLKKGYGMHLDMLMISGITAVFSALGMPWLVAATVRSLAHVKSLGVYEQKE-GKEVIAGMTEQRVSGVAIHTLIGSSILFLRPQLARVPLAVLMGLFLYLGVSGLKGNQLFDRTKLLVTDPELRPKAPWTTDIPMKKTNIFTLIQLACLWGMMWVKGSPIGVLFPVIIALLAPIRFALERPGWFSKKEMAILDTE 1823
            KI+E P KGI+ D++ KAP Y SD  DG N+K +++ FFLFFACLAPAVAFGGL+G +TEG +G +EM+  TA +GI YAL SGQPLTIIGSTGPVLAF  VLY+TA  L LPFLP+Y+WVG WT+ IL   S+ S+SN+V YFTRFTDEIFSLLIS+IF+ EA KD++  F NP+V F KA+ SLVIA+ T+NT+    GLR      K VR+V+ADF PTIGV +G F    AKAK    LPTL +P SF+T++GRPWLV +F+LP+WAR+AA +PALM+SVLLFMDQNITVRLVNS  HK+KKGYG+HLDM ++S +T + S  G+PWLVAATVRSL HV++   ++  E G+ VI  M E R++G+AIH+LIG +IL  RP L +VPLAVLMGLFLYLG S L GNQ+++R KLL+TDP  RPKA W   +P K +  FT +Q ACL GM  +K SPIGVLFP++IA LAPIR A+E+ GWF KK++ ILD+E
Sbjct:  105 KILERPFKGIVEDVRRKAPHYLSDFKDGANVKGVAATFFLFFACLAPAVAFGGLMGKLTEGNIGTMEMLLATASNGIAYALFSGQPLTIIGSTGPVLAFTLVLYRTAQNLALPFLPLYSWVGIWTSLILFLSSVTSLSNLVNYFTRFTDEIFSLLISLIFLYEAVKDLSSFFINPSVGFAKALLSLVIAVTTFNTSITLAGLRRGKVFTKRVRDVIADFAPTIGVLAGCFLTALAKAKKAEALPTLLIPDSFSTSLGRPWLVNIFALPIWARWAAFIPALMSSVLLFMDQNITVRLVNSPSHKIKKGYGLHLDMFVVSILTFINSLFGLPWLVAATVRSLNHVRACARFKSTEDGEVVIESMQENRLTGLAIHSLIGVAILGFRPLLGQVPLAVLMGLFLYLGKSSLAGNQMWERLKLLITDPAQRPKAAWAQKVPFKVSAAFTGLQFACLGGMWALKSSPIGVLFPLLIAALAPIRVAIEKLGWFDKKDLEILDSE 601
[Close]
BLAST of mRNA_S-ischiensis_contig13.2966.1 vs. uniprot
Match: B7FYF1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYF1_PHATC)

HSP 1 Score: 532 bits (1370), Expect = 1.630e-177
Identity = 288/560 (51.43%), Postives = 382/560 (68.21%), Query Frame = 3 
Query:  186 LPVMSSLNPGRPSLLPAVKFLSQGRRNKQKLASTATWT--PVEADMGAAEGVKIVEAPGKGIMSDIKAKAPLYKSDITDGLNLKVLSSVFFLFFACLAPAVAFGGLLGIVTEGAMGPIEMIAGTAVSGILYALASGQPLTIIGSTGPVLAFIAVLYKTAGRLGLPFLPMYAWVGFWTAGILAACSLFSVSNMVEYFTRFTDEIFSLLISVIFILEACKDIAGGFTNPAVTFTKAVSSLVIALLTYNTATIFRGLRGTPYMVKPVREVLADFGPTIGVFSGIFAAVWAKAKYGLVL---PTLNVPASFTTTIGRPWLVPVFSLPVWARFAAAVPALMASVLLFMDQNITVRLVNSKEHKLKKGY-------GMHLDMLMISGITAVFSALGMPWLVAATVRSLAHVKSLGVYEQKEGKEVIAGMTEQRVSGVAIHTLIGSSILFLRPQ--LARVPLAVLMGLFLYLGVSGLKGNQLFDRTKLLVTDPELRPKAPWTTDIPMKKTNIFTLIQLACLWGMMWVKGSPIGVLFPVIIALLAPIRFALERPGWFSKKEMAILDTE 1823
            L + SS +P   SL  A    S   +   KL+ + +    PV+      +   + E P KGI+ D KA+ PL+ SDI DGLN++ L++  FLFFACLAPAV FGGL  + T GA+G +EM++ TA+ G++YA+ S QPLTIIGSTGPVLAF+A L + A  L LPFL +Y+W G WT+ IL   S+ S SN+V+Y TRFTDEIFSLLIS IF+ EA  D+   F++PA TFTKA+ +L  A  T+  AT+ +GLR T      VR  +++F PTIGV +    A WA+  +G  L   P+L++PA F TT GRPWLVP+   PVWAR+AA +PALMA+VLLF+DQNITVRLVN+   K++KG        GMH DM ++S +TA  S +G+PWLVAATVRSL+HV +L  Y+ KEGK  + G  EQR++G++IH+LIG ++LF +P+  L +VPL VLMGLF+YLG S L GN++++R   L  D  + PK  W+  +P K T+ FTLIQ+ACL  M WVK SP GVLFPV+IA+LAP+RFALE+ G   K+ M +LD E
Sbjct:   37 LKISSSRSPTFSSLKKAKVIASVTTKPLTKLSDSMSVVSPPVDERENNKDDETLFEGPFKGIIRDYKARLPLFASDIKDGLNVQCLAATMFLFFACLAPAVGFGGLFDVATGGAIGTVEMVSSTALCGLIYAITSAQPLTIIGSTGPVLAFVACLAQLAKMLNLPFLQLYSWTGLWTSAILFVSSITSASNLVKYLTRFTDEIFSLLISCIFVFEAVSDVGRTFSSPASTFTKALLTLTCAASTFTIATLLKGLRKTSLFPSRVRNTISNFAPTIGVVTASLIARWARVVHGTKLAGLPSLSIPAVFGTTSGRPWLVPILDFPVWARWAAFLPALMATVLLFLDQNITVRLVNNPRWKMEKGRRKNNVLDGMHADMFIVSILTAAQSLVGIPWLVAATVRSLSHVGALSKYD-KEGK--VVGTIEQRMTGISIHSLIGCAVLFSKPRKLLTQVPLPVLMGLFMYLGTSSLPGNEMWERVTGLFKDKTVAPKQRWSDKVPDKVTSTFTLIQVACLGAMFWVKESPFGVLFPVVIAMLAPLRFALEKQGIIKKEYMDVLDEE 593
[Close]
BLAST of mRNA_S-ischiensis_contig13.2966.1 vs. uniprot
Match: A0A7S1Z6H0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z6H0_9STRA)

HSP 1 Score: 520 bits (1338), Expect = 6.560e-173
Identity = 271/507 (53.45%), Postives = 355/507 (70.02%), Query Frame = 3 
Query:  339 IVEAPGKGIMSDIKAKAPLYKSDITDGLNLKVLSSVFFLFFACLAPAVAFGGLLGIVTEGAMGPIEMIAGTAVSGILYALASGQPLTIIGSTGPVLAFIAVLYKTAGRLGLPFLPMYAWVGFWTAGILAACSLFSVSNMVEYFTRFTDEIFSLLISVIFILEACKDIAGGFTNPAVTFTKAVSSLVIALLTYNTATIFRGLRGTPYMVKPVREVLADFGPTIGVFSGIFAAVWAKAKYGL---VLPTLNVPASFTTTIGRPWLVPVFSLPVWARFAAAVPALMASVLLFMDQNITVRLVNSKEHKLKKGY-------GMHLDMLMISGITAVFSALGMPWLVAATVRSLAHVKSLGVYEQKEGKEVIAGMTEQRVSGVAIHTLIGSSILFLRPQ--LARVPLAVLMGLFLYLGVSGLKGNQLFDRTKLLVTDPELRPKAPWTTDIPMKKTNIFTLIQLACLWGMMWVKGSPIGVLFPVIIALLAPIRFALERPGWFSKKEMAILDTE 1823
            + E  G GI  D K + P +KSDI DGLN + L++  FLFFACLAPAV FG L  + T  A+G +EM++ TA  G++Y+L S QPLTIIGSTGPVLAF+A L + +  + LPFLP+YAW G W + IL   S+ S S++V+Y TRFTDEIFS+LIS IF++EA  D+   FT+PA TFTKA+ +L+ A  T+ TAT  +GLR T Y  K VR+ L++F PTIGV +    A WAK  +G     LP+L +P++F TT GRPWLVP+  LPVWAR+   +PA+MA+VLLF+DQNITVR+VN+  +K++KG        GMH DML+IS +TA+ S +G+PWLVAATVRS++HV++L  ++ KEG   I G  EQRV+G  IH+LIG+SI F +P+  L  VPL VLMGLF+YLG S L GN++F+R K L  D  +  K  W+  +P     +FT IQ+ACL  M WVK SPIGVLFPV+IALLAP+RF L + G   K+ M ILD +
Sbjct:   76 LFEGIGVGIKRDYKKRLPFFKSDIQDGLNTQCLAATLFLFFACLAPAVGFGALFSVATNHAIGTMEMVSSTAACGMIYSLTSAQPLTIIGSTGPVLAFVACLAQLSSAMSLPFLPVYAWTGLWVSAILFMSSITSASSLVKYLTRFTDEIFSVLISTIFVVEALSDVGRTFTSPASTFTKALLTLLCASTTFGTATFLKGLRNTTYFTKTVRDTLSNFAPTIGVVTASLIARWAKLTHGAGVASLPSLAIPSTFATTSGRPWLVPLMDLPVWARWGTFLPAIMATVLLFLDQNITVRVVNNPRYKMEKGRRKGNFIDGMHADMLIISILTALTSVVGLPWLVAATVRSISHVRALSTFD-KEGN--IKGTIEQRVTGFCIHSLIGASIFFAKPRNLLTHVPLPVLMGLFMYLGTSALPGNEMFERIKGLFKDDSVAKKEKWSDTVPKGVVRLFTAIQVACLAAMFWVKESPIGVLFPVVIALLAPLRFGLVKMGVIKKEYMDILDED 579
[Close]
BLAST of mRNA_S-ischiensis_contig13.2966.1 vs. uniprot
Match: A0A7S4D862_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D862_HETAK)

HSP 1 Score: 521 bits (1341), Expect = 1.060e-172
Identity = 281/520 (54.04%), Postives = 367/520 (70.58%), Query Frame = 3 
Query:  270 QKLASTATWTPVEADMGAAEGVKIVEAPGKGIMSDIKAKAPLYKSDITDGLNLKVLSSVFFLFFACLAPAVAFGGLLGIVTEGAMGPIEMIAGTAVSGILYALASGQPLTIIGSTGPVLAFIAVLYKTAGRLGLPFLPMYAWVGFWTAGILAACSLFSVSNMVEYFTRFTDEIFSLLISVIFILEACKDIAGGFTNPAVTFTKAVSSLVIALLTYNTATIFRGLRGTPYMVKPVREVLADFGPTIGVFSGIFAAVWAKAKYG--LVLPTLNVPASFTTTIGRPWLVPVFSLPVWARFAAAVPALMASVLLFMDQNITVRLVNSKEHKLKKGYGMHLDMLMISGITAVFSALGMPWLVAATVRSLAHVKSLGVYEQKEGKEVIAGMTEQRVSGVAIHTLIGSSILFLRPQLARVPLAVLMGLFLYLGVSGLKGNQLFDRTKLL-VTDPELRPK-APWTTDIPMKKTNIFTLIQLACLWGMMWVKGSPIGVLFPVIIALLAPIRFALERPGWFSKKEMAILD 1817
            QK    +   P   +   AE + +VE   KG+  D KAKAP Y SDI DG NLK LS+V FLFF C+APAVAFGG+L  VT  A+G +EM+  T+V G++YAL SGQPLTIIGSTGPVLAF  VLY+T   LG PFLP+YAW G W+AG L   ++FS+SN+VE FTRFTDE+FSLLIS IF+ EA + +    T+P V   + +++LV+A  TY TA   +G++ TPY+ +  R+VLADF P++G+ +G+  A   KA+     ++PTL VPA F TT GRPW V + SLP  AR+A A+PA MA+VLLFMDQ ITV LVN+    L+KGYG+HLDM +++ +TA  S  G+PWLVAATVRS+AHV  L   ++  G+ V   + EQRVSG AIH LI ++IL  R QLA++PLAVL GLFLYLG S L+GNQL++R KL+ V DP  +P  A +  D+P +    +T +Q+ACL  +  +KGSP+GVLFPV+IALL PIR A+ER G F+K+E+A+LD
Sbjct:  108 QKNEEPSIIEPFPDEPSHAESLPVVEKFLKGLKRDAKAKAPYYISDIKDGFNLKTLSAVVFLFFGCIAPAVAFGGVLSKVTNNAIGTMEMLLSTSVCGMIYALLSGQPLTIIGSTGPVLAFTGVLYRTCAALGQPFLPVYAWTGLWSAGYLGLAAVFSLSNIVEGFTRFTDEVFSLLISAIFVAEAVQGVLRALTDPLVPLAQGLATLVLATTTYQTAVKLKGIKETPYLGRRRRQVLADFAPSLGIAAGVLGATLLKARNAGAALVPTLPVPAVFATTSGRPWAVDLLSLPPAARWACALPAAMAAVLLFMDQTITVHLVNATP-TLEKGYGLHLDMAVLAALTAGCSVFGLPWLVAATVRSVAHVNGLTTTDEGTGRPV--KVAEQRVSGFAIHALILAAILVGRAQLAQIPLAVLSGLFLYLGTSSLRGNQLYERLKLVTVVDPRKKPPTAQFCADLPRRTVRKYTSLQMACLAALWLLKGSPVGVLFPVMIALLPPIRHAIERAGSFTKEELAVLD 624
[Close]
BLAST of mRNA_S-ischiensis_contig13.2966.1 vs. uniprot
Match: A0A0G4GX26_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GX26_VITBC)

HSP 1 Score: 503 bits (1294), Expect = 2.730e-166
Identity = 269/504 (53.37%), Postives = 352/504 (69.84%), Query Frame = 3 
Query:  327 EGVKIVEAPGKGIMSDIKAKAPLYKSDITDGLNLKVLSSVFFLFFACLAPAVAFGGLLGIVTEGAMGPIEMIAGTAVSGILYALASGQPLTIIGSTGPVLAFIAVLYKTAGRLGLPFLPMYAWVGFWTAGILAACSLFSVSNMVEYFTRFTDEIFSLLISVIFILEACKDIAGGFTNPAVTFTKAVSSLVIALLTYNTATIFRGLRGTPYMVKPVREVLADFGPTIGVFSGIFAAVWAKAKYGLVLPTLNVPASFTTTIGRPWLV--PVFSLPVWARFAAAVPALMASVLLFMDQNITVRLVNSKEHKLKKGYGMHLDMLMISGITAVFSALGMPWLVAATVRSLAHVKSLGVYEQKEGKE---VIAGMTEQRVSGVAIHTLIGSSILFLRPQLARVPLAVLMGLFLYLGVSGLKGNQLFDRTKLLVTDPELRPKAPWTTDIPMKKTNIFTLIQLACLWGMMWVKGSPIGVLFPVIIALLAPIRFALERPGWFSKKEMAILDTE 1823
            E   +VE   +GI  D KA+  LY+SDI DG++LK LSS+FFLFF CLAPAVAFG  +   T G +G IEMI  T + G++YA  S QPLTIIGSTGPVLAF + LYK    + LPFLP Y  +G W    L   ++FS+SN ++Y TR+TDEIFSLLISVIF+ EA    +G FTN AV+ + A  S  I   T+  A +  GLR +P+  + +R+  ADFGPTI V  G   A  A  +YG+ LPTL++P++ TT+ GRPWL+   + SLP+W R+ AA+PALM +VLLFMDQNITVRLVNS +HKLKK  G  LD+  ++  T + S LG+PWLVAATVRSL HV+S+  ++  +G +    + G  EQRV+G+ IHTLI +S++  R QLA +P AVL GLFL+LGVS L GN+++ RTKL VT+P+L PK PWT  +P++K ++FT  Q+ACL  +  +K S IGV+FPVIIALL PIR ALER   FS +E+A+LD+E
Sbjct:   76 EAAPLVEPFWRGIARDAKARYALYRSDIVDGISLKALSSIFFLFFGCLAPAVAFGSAMAAATGGQIGSIEMIVATGMLGLIYAAFSAQPLTIIGSTGPVLAFTSALYKGCQAMQLPFLPTYVCIGLWNTLYLGIAAVFSMSNSIKYLTRWTDEIFSLLISVIFMYEALVYFSGLFTNTAVSASTAALSTGIGAFTFIAAVLLSGLRKSPFFNRFIRDKTADFGPTIAVAGGSGLAYLAYLRYGIRLPTLSMPSALTTSTGRPWLMLRSLSSLPLWVRWGAALPALMCTVLLFMDQNITVRLVNSNKHKLKKPNGYDLDLATLTVTTGISSVLGLPWLVAATVRSLNHVRSVMNFDYSKGGDDSSAVVGCDEQRVTGLGIHTLILTSVILFRQQLALLPEAVLKGLFLFLGVSTLAGNEMWQRTKLFVTEPKLAPKRPWTNVVPLRKVHLFTAAQIACLAAVWLLKESSIGVMFPVIIALLHPIRVALERYKAFSAEEVAVLDSE 579
[Close]
BLAST of mRNA_S-ischiensis_contig13.2966.1 vs. uniprot
Match: A0A5B8MFK0_9CHLO (Bicarbonate transporter n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MFK0_9CHLO)

HSP 1 Score: 499 bits (1284), Expect = 8.910e-165
Identity = 254/502 (50.60%), Postives = 349/502 (69.52%), Query Frame = 3 
Query:  333 VKIVEAPGKGIMSDIKAKAPLYKSDITDGLNLKVLSSVFFLFFACLAPAVAFGGLLGIVTEGAMGPIEMIAGTAVSGILYALASGQPLTIIGSTGPVLAFIAVLYKTAGRLGLPFLPMYAWVGFWTAGILAACSLFSVSNMV-EYFTRFTDEIFSLLISVIFILEACKDIAGGFTNPAVTFTKAVSSLVIALLTYNTATIFRGLRGTPYMVKPVREVLADFGPTIGVFSGIFAAVWAKAKYGLVLPTLNVPASFTTTIGRPWLVPVFSLPVWARFAAAVPALMASVLLFMDQNITVRLVNSKEHKLKKGYGMHLDMLMISGITAVFSALGMPWLVAATVRSLAHVKSLGVYEQKEGKEV----IAGMTEQRVSGVAIHTLIGSSILFLRPQLARVPLAVLMGLFLYLGVSGLKGNQLFDRTKLLVTDPELRPKAPWTTDIPMKKTNIFTLIQLACLWGMMWVKGSPIGVLFPVIIALLAPIRFALERPGWFSKKEMAILDTE 1823
            + IVE P  G+  D+K + P Y SD T+GLNLK L+S  F+FFACLAPAVAFG LL + T+GAMG +EM+  T++ G++YAL SGQP+TIIGSTGPVLAF A++Y T  ++ LPFL  YAWVG WT+GIL  C++ S SN+V  Y TRFTDEIF+ LISVIF++EA K+I     N  V+ + A+ S++ A+ T   A    GLR + Y  K  R+++A+FGPTI + +   A  W   +YG+ L  L +P+    +  RPW+V +   PVWAR+A+++PA+M S+L+F DQNIT RLVNSK++K+KKGYG H+D+L+++  T VFS LGMPWLVAATVRS+ H+KSL  +E  +  +V    + G+TE RV+  AIH  IG+S+L+ R  LA++P  VLMGLFLYLG+S +KGN+  +R +L   D +  PK P+ TDI +  T  FTL+Q+A L  ++ +K S  G+LFPV+IA L  I     R  WF++KE+A+LD E
Sbjct:   80 LSIVETPFVGLKRDLKQRLPFYVSDYTEGLNLKCLASTLFMFFACLAPAVAFGSLLNVKTQGAMGALEMLVSTSICGMVYALFSGQPVTIIGSTGPVLAFTAIMYSTCQQMALPFLSTYAWVGLWTSGILGLCAVTSTSNLVIRYLTRFTDEIFAGLISVIFVVEAMKNIVSLLFNSGVSSSAALLSIMTAISTCAFALSLAGLRSSSYFNKKARDLVANFGPTISIVACTIACTWLATRYGIGLEYLTLPSQIAPSTPRPWVVSLMDTPVWARWASSLPAVMVSILMFFDQNITTRLVNSKDNKMKKGYGYHVDLLIVAANTLVFSMLGMPWLVAATVRSVNHLKSLTTFEDVKEGDVETTKVVGVTETRVTNFAIHACIGASVLYARDLLAKIPQCVLMGLFLYLGLSAIKGNEFLERIELFFMDKKKMPKVPYVTDISLGATKKFTLLQIASLLALVALKESKYGILFPVVIAALQIILVLAVRAKWFTEKEIAVLDRE 581
[Close]
BLAST of mRNA_S-ischiensis_contig13.2966.1 vs. uniprot
Match: A0A1Z5KC09_FISSO (Solute carrier family 4 (Anion exchanger), member 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC09_FISSO)

HSP 1 Score: 493 bits (1270), Expect = 6.620e-163
Identity = 257/504 (50.99%), Postives = 345/504 (68.45%), Query Frame = 3 
Query:  339 IVEAPGKGIMSDIKAKAPLYKSDITDGLNLKVLSSVFFLFFACLAPAVAFGGLLGIVTEGAMGPIEMIAGTAVSGILYALASGQPLTIIGSTGPVLAFIAVLYKTAGRLGLPFLPMYAWVGFWTAGILAACSLFSVSNMVEYFTRFTDEIFSLLISVIFILEACKDIAGGFTNPAVTFTKAVSSLVIALLTYNTATIFRGLRGTPYMVKPVREVLADFGPTIGVFSGIFAAVWAKAKYGLVLPTLNVPASFTTTIGRPWLVPVFSLPVWARFAAAVPALMASVLLFMDQNITVRLVNSKEHKLKKGY-------GMHLDMLMISGITAVFSALGMPWLVAATVRSLAHVKSLGVYEQKEGKEVIAGMTEQRVSGVAIHTLIGSSILFLRPQ--LARVPLAVLMGLFLYLGVSGLKGNQLFDRTKLLVTDPELRPKAPWTTDIPMKKTNIFTLIQLACLWGMMWVKGSPIGVLFPVIIALLAPIRFALERPGWFSKKEMAILDTE 1823
            ++E  G+G+  D  A+ P +KSD+TDG  L  L++ FF+FFACLAPAV FGGL  + +  A+G +EMI  TAVSG+L+AL + QP+TIIG TGPVLAF+A L + A    LPFLP+YAW G WT+ IL   ++ S SN+V+Y TRFTDEIFS+LISVIF+ EAC +IAG F++  +   +A+ +LV A  TY  +T  +GLR T Y  KP+R  +++F PTIGV    + A  A+  +G+ LP L +P+ F TT GRPWL+P+  LPVWAR+A+ +PALMA+VLLF+DQNITVRLVN+ ++ + KG        GMH DML+IS +TA+ S  G+PWLVAATVRS++HVK+   Y+  +GK  + G  EQR +G  IH  IG  +L  +P+  LA +P   LMGLFLYLG S L GN+ ++R K L  +     K  WT  +P       T++QLACL  M+WVK SP GV FP++IA+LAP+RFA++R G+  K  M ILD E
Sbjct:   67 LLEELGRGVRRDFAARLPYWKSDLTDGFQLPCLAATFFMFFACLAPAVGFGGLYAVASNSAIGTVEMITSTAVSGVLFALTAAQPMTIIGGTGPVLAFVACLAQMADMYKLPFLPLYAWTGLWTSAILFVSAMTSASNLVKYLTRFTDEIFSVLISVIFLFEACSNIAGTFSSAPLV--QALLTLVCASTTYTISTRLQGLRRTAYFNKPIRNTISNFAPTIGVVVAAWLARAARVAHGVTLPALAIPSQFGTTTGRPWLIPLLDLPVWARWASFLPALMATVLLFLDQNITVRLVNNNKYNMTKGRRPGNVLDGMHADMLVISLLTALQSIFGLPWLVAATVRSVSHVKACAKYDN-DGK--VVGTIEQRFTGALIHAGIGCCVLLKQPRQWLALIPKPALMGLFLYLGASSLPGNEFWERFKGLFKEKATAVKERWTGVVPQSSVRKLTVVQLACLAAMIWVKESPAGVFFPIVIAMLAPLRFAMDRSGFIPKHHMNILDEE 565
[Close]
BLAST of mRNA_S-ischiensis_contig13.2966.1 vs. uniprot
Match: A0A7S3UGS7_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UGS7_9CHLO)

HSP 1 Score: 487 bits (1253), Expect = 1.430e-160
Identity = 254/501 (50.70%), Postives = 339/501 (67.66%), Query Frame = 3 
Query:  327 EGVKIVEAPGKGIMSDIKAKAPLYKSDITDGLNLKVLSSVFFLFFACLAPAVAFGGLLGIVTEGAMGPIEMIAGTAVSGILYALASGQPLTIIGSTGPVLAFIAVLYKTAGRLGLPFLPMYAWVGFWTAGILAACSLFSVSNMVEYFTRFTDEIFSLLISVIFILEACKDIAGGFTNPAVTFTKAVSSLVIALLTYNTATIFRGLRGTPYMVKPVREVLADFGPTIGVFSGIFAAVWAKAKYGLVLPTLNVPASFTTTIGRPWLVPVFSLPVWARFAAAVPALMASVLLFMDQNITVRLVNSKEHKLKKGYGMHLDMLMISGITAVFSALGMPWLVAATVRSLAHVKSLGVYEQKEGK--EVIAGMTEQRVSGVAIHTLIGSSILFLRPQLARVPLAVLMGLFLYLGVSGLKGNQLFDRTKLLVTDPELRPKAPWTTDIPMKKTNIFTLIQLACLWGMMWVKGSPIGVLFPVIIALLAPIRFALERPGWFSKKEMAILDTE 1823
            +G K+ +  G GI+ D+K KAP + SD  DG+NL+ ++S FFLFF CLAPAVAFGG++ + T G +G +EMI  TA  G +YAL SGQP+TI+GSTGPVLA  + LYK      LPFLPMYAWVG W++G+L  C+L S SN V+  T+FTDE+FS LI+ IFI EA KD    + +       A+ S +++L T   AT     R +P+  K VR  +ADF PTIG+      ++    ++ + LP L VP  F  ++ R W+V +FS+P+WAR+AAAVP +M +VLLF DQNIT RLVNS E++LKKG+G HLDM ++S +TA  S  G+PWLVAATVRS+ H+KSL V         E I  + E R++G +IH LIG S++F R  L+ +PLAVLMGLFLYLGVS +KGN   +R  L++ DPEL P+ P TTDI +  T+ FTLIQ+  L  M  VK S +G+LFPV+IALL P+R  LE+   F+K+E+ +LD E
Sbjct:   48 KGSKVFQPLGVGIVEDVKRKAPWFTSDFKDGINLRGVASTFFLFFGCLAPAVAFGGMMSLATGGLIGAVEMILATAGCGCVYALTSGQPITIVGSTGPVLALTSALYKMCLTYSLPFLPMYAWVGLWSSGMLMLCALTSTSNAVKLLTKFTDEVFSALIAAIFIAEALKDSLSLYLHAESGAEVALLSTLVSLTTLFVATTLANFRRSPFFNKKVRNTVADFAPTIGIVIATLVSMVVSNRFAINLPMLAVPMEFAPSVPRAWVVNLFSVPLWARWAAAVPGVMVTVLLFFDQNITTRLVNSSENRLKKGHGYHLDMAVLSVLTAYCSVFGLPWLVAATVRSVNHLKSLSVMGPSPTGVGERIESVMENRLTGFSIHFLIGISLMFARSLLSMIPLAVLMGLFLYLGVSAIKGNSFLERVGLMMHDPELVPQLPHTTDIKISSTHKFTLIQIVALLAMYQVKNSKVGILFPVLIALLGPVRTGLEKMHVFTKEELHVLDGE 548
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig13.2966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMX9_ECTSI1.630e-22467.20Boron transporter 1 n=1 Tax=Ectocarpus siliculosus... [more]
A0A835YV61_9STRA1.410e-21765.02Bicarbonate transporter n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DEQ9_9STRA9.430e-20261.37Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
B7FYF1_PHATC1.630e-17751.43Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S1Z6H0_9STRA6.560e-17353.45Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4D862_HETAK1.060e-17254.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4GX26_VITBC2.730e-16653.37Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A5B8MFK0_9CHLO8.910e-16550.60Bicarbonate transporter n=2 Tax=Chloropicon primus... [more]
A0A1Z5KC09_FISSO6.620e-16350.99Solute carrier family 4 (Anion exchanger), member ... [more]
A0A7S3UGS7_9CHLO1.430e-16050.70Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig13contigS-ischiensis_contig13:1067857..1081356 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score656.8
Seed ortholog evalue1e-185
Seed eggNOG ortholog2880.D7FMX9
EggNOG free text desc.inorganic anion exchanger activity
EggNOG OGsKOG1172@1,KOG1172@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionboron transporter 1
Ec32 orthologEc-25_002730.1
Exons15
Model size2434
Cds size1809
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815686.3302307-UTR-S-ischiensis_contig13:1067856..10684641622815686.3302307-UTR-S-ischiensis_contig13:1067856..1068464Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 1067857..1068464 -
1695739850.688056-UTR-S-ischiensis_contig13:1067856..10684641695739850.688056-UTR-S-ischiensis_contig13:1067856..1068464Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 1067857..1068464 -
1622815686.5340858-UTR-S-ischiensis_contig13:1081339..10813561622815686.5340858-UTR-S-ischiensis_contig13:1081339..1081356Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 1081340..1081356 -
1695739850.8878105-UTR-S-ischiensis_contig13:1081339..10813561695739850.8878105-UTR-S-ischiensis_contig13:1081339..1081356Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 1081340..1081356 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815686.3409996-CDS-S-ischiensis_contig13:1068464..10685941622815686.3409996-CDS-S-ischiensis_contig13:1068464..1068594Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1068465..1068594 -
1695739850.7007768-CDS-S-ischiensis_contig13:1068464..10685941695739850.7007768-CDS-S-ischiensis_contig13:1068464..1068594Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1068465..1068594 -
1622815686.352947-CDS-S-ischiensis_contig13:1068936..10690161622815686.352947-CDS-S-ischiensis_contig13:1068936..1069016Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1068937..1069016 -
1695739850.7126596-CDS-S-ischiensis_contig13:1068936..10690161695739850.7126596-CDS-S-ischiensis_contig13:1068936..1069016Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1068937..1069016 -
1622815686.3671227-CDS-S-ischiensis_contig13:1069365..10695521622815686.3671227-CDS-S-ischiensis_contig13:1069365..1069552Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1069366..1069552 -
1695739850.7239032-CDS-S-ischiensis_contig13:1069365..10695521695739850.7239032-CDS-S-ischiensis_contig13:1069365..1069552Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1069366..1069552 -
1622815686.3807878-CDS-S-ischiensis_contig13:1070989..10711631622815686.3807878-CDS-S-ischiensis_contig13:1070989..1071163Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1070990..1071163 -
1695739850.7355192-CDS-S-ischiensis_contig13:1070989..10711631695739850.7355192-CDS-S-ischiensis_contig13:1070989..1071163Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1070990..1071163 -
1622815686.3970034-CDS-S-ischiensis_contig13:1071967..10720901622815686.3970034-CDS-S-ischiensis_contig13:1071967..1072090Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1071968..1072090 -
1695739850.7465055-CDS-S-ischiensis_contig13:1071967..10720901695739850.7465055-CDS-S-ischiensis_contig13:1071967..1072090Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1071968..1072090 -
1622815686.4147942-CDS-S-ischiensis_contig13:1072676..10727601622815686.4147942-CDS-S-ischiensis_contig13:1072676..1072760Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1072677..1072760 -
1695739850.7549722-CDS-S-ischiensis_contig13:1072676..10727601695739850.7549722-CDS-S-ischiensis_contig13:1072676..1072760Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1072677..1072760 -
1622815686.427774-CDS-S-ischiensis_contig13:1073091..10731931622815686.427774-CDS-S-ischiensis_contig13:1073091..1073193Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1073092..1073193 -
1695739850.7714567-CDS-S-ischiensis_contig13:1073091..10731931695739850.7714567-CDS-S-ischiensis_contig13:1073091..1073193Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1073092..1073193 -
1622815686.4383843-CDS-S-ischiensis_contig13:1074095..10741981622815686.4383843-CDS-S-ischiensis_contig13:1074095..1074198Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1074096..1074198 -
1695739850.7840028-CDS-S-ischiensis_contig13:1074095..10741981695739850.7840028-CDS-S-ischiensis_contig13:1074095..1074198Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1074096..1074198 -
1622815686.450185-CDS-S-ischiensis_contig13:1074670..10747801622815686.450185-CDS-S-ischiensis_contig13:1074670..1074780Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1074671..1074780 -
1695739850.797218-CDS-S-ischiensis_contig13:1074670..10747801695739850.797218-CDS-S-ischiensis_contig13:1074670..1074780Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1074671..1074780 -
1622815686.4626837-CDS-S-ischiensis_contig13:1075571..10756391622815686.4626837-CDS-S-ischiensis_contig13:1075571..1075639Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1075572..1075639 -
1695739850.808901-CDS-S-ischiensis_contig13:1075571..10756391695739850.808901-CDS-S-ischiensis_contig13:1075571..1075639Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1075572..1075639 -
1622815686.4729898-CDS-S-ischiensis_contig13:1076566..10766951622815686.4729898-CDS-S-ischiensis_contig13:1076566..1076695Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1076567..1076695 -
1695739850.819524-CDS-S-ischiensis_contig13:1076566..10766951695739850.819524-CDS-S-ischiensis_contig13:1076566..1076695Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1076567..1076695 -
1622815686.4846854-CDS-S-ischiensis_contig13:1077834..10779391622815686.4846854-CDS-S-ischiensis_contig13:1077834..1077939Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1077835..1077939 -
1695739850.8325014-CDS-S-ischiensis_contig13:1077834..10779391695739850.8325014-CDS-S-ischiensis_contig13:1077834..1077939Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1077835..1077939 -
1622815686.5003781-CDS-S-ischiensis_contig13:1078812..10789681622815686.5003781-CDS-S-ischiensis_contig13:1078812..1078968Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1078813..1078968 -
1695739850.8409061-CDS-S-ischiensis_contig13:1078812..10789681695739850.8409061-CDS-S-ischiensis_contig13:1078812..1078968Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1078813..1078968 -
1622815686.51209-CDS-S-ischiensis_contig13:1079854..10799941622815686.51209-CDS-S-ischiensis_contig13:1079854..1079994Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1079855..1079994 -
1695739850.8513224-CDS-S-ischiensis_contig13:1079854..10799941695739850.8513224-CDS-S-ischiensis_contig13:1079854..1079994Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1079855..1079994 -
1622815686.5240932-CDS-S-ischiensis_contig13:1081221..10813391622815686.5240932-CDS-S-ischiensis_contig13:1081221..1081339Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1081222..1081339 -
1695739850.8669105-CDS-S-ischiensis_contig13:1081221..10813391695739850.8669105-CDS-S-ischiensis_contig13:1081221..1081339Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 1081222..1081339 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig13.2966.1prot_S-ischiensis_contig13.2966.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig13 1068465..1081339 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig13.2966.1

>prot_S-ischiensis_contig13.2966.1 ID=prot_S-ischiensis_contig13.2966.1|Name=mRNA_S-ischiensis_contig13.2966.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=603bp
MAAAVAMSVAWLAGTAQPSLAFGLGAARINPLGAAGRASASAWPAATVGR
AVPRPTLPVMSSLNPGRPSLLPAVKFLSQGRRNKQKLASTATWTPVEADM
GAAEGVKIVEAPGKGIMSDIKAKAPLYKSDITDGLNLKVLSSVFFLFFAC
LAPAVAFGGLLGIVTEGAMGPIEMIAGTAVSGILYALASGQPLTIIGSTG
PVLAFIAVLYKTAGRLGLPFLPMYAWVGFWTAGILAACSLFSVSNMVEYF
TRFTDEIFSLLISVIFILEACKDIAGGFTNPAVTFTKAVSSLVIALLTYN
TATIFRGLRGTPYMVKPVREVLADFGPTIGVFSGIFAAVWAKAKYGLVLP
TLNVPASFTTTIGRPWLVPVFSLPVWARFAAAVPALMASVLLFMDQNITV
RLVNSKEHKLKKGYGMHLDMLMISGITAVFSALGMPWLVAATVRSLAHVK
SLGVYEQKEGKEVIAGMTEQRVSGVAIHTLIGSSILFLRPQLARVPLAVL
MGLFLYLGVSGLKGNQLFDRTKLLVTDPELRPKAPWTTDIPMKKTNIFTL
IQLACLWGMMWVKGSPIGVLFPVIIALLAPIRFALERPGWFSKKEMAILD
TE*
back to top

mRNA from alignment at S-ischiensis_contig13:1067857..1081356-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig13.2966.1 ID=mRNA_S-ischiensis_contig13.2966.1|Name=mRNA_S-ischiensis_contig13.2966.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=13500bp|location=Sequence derived from alignment at S-ischiensis_contig13:1067857..1081356- (Schizocladia ischiensis KU_0333)
AGACACCCCTCCCTGCCATGGCTGCGGCTGTGGCCATGTCAGTGGCCTGG
CTTGCCGGAACCGCCCAACCTTCGCTGGCGTTTGGGCTGGGAGCGGCACG
AATCAACCCCTTGGGGGCAGCGGGCCGTGCATCAGGTAACTTAACCCTTT
TGCCCCTGGGGTCCGTGTATTCATTGGGTTTTTTAGTGTGTAAGTCCAAT
TTACCACGGGTAGAAGGGTTACGCCTTTGAGGACATTTAACTTTTTGTTT
GGACACACAACTATGAGCGGGGCGAATCAGCCCCTTGGGGGCAGCGGGCG
GCTCTCCTGCGAAGGCGTTGGGCCATCCATCAGGTGACTTAACCTTTGAC
CCCTGCTAAATTGGGCTTGCACACTAAAACCCTATGATTATACGGACCCC
AGGGATAAAAGGGTTAACTTCTTGTTTGGACACTAAACTATAGGAGCAGC
GTCCGTCAGGCAACTTATAACGTGTTTATCCCTGGGGTCCGTATAGTCAT
ACGGTTTTAGTGTGTATGTCCAATTTGGCAGGGGTAAAAAGGATAACCCT
TTTTCCCTGCGAAATTGTTAACCCTTTTACCCCTGCGAAATTGGACGTAC
ACACTAAAACCTTATGATTATATGGACCTCAGGGGCAAGAGGGTTGATTT
GAGAAGGTTAAACTTTTTTTTGGGACGCTGAACTATCGGAGCATGGTGTG
GACACGTGTCACATGGCTATATCTTAACCCTTTGAGGACGTTTAACTTTT
TGTTTCGACCGTAAACTATGTATGGGAGCATGGTGTTGATATGTGTCACA
ATGGTTATCAGGTAACGTACTCGTAACCCTTTGAGGACGTTGAACTGTTT
GTTTGGGCACTAAACTATTGTGGGAGAATGGTGTGGATACGTGTCACAAT
GGGTCAATGGTCTCGGGACCACGGCAAGCACCATGTGAGTACATATACAA
TGGTTATCAGGACCCTTTGAGGATGCTACCTTTGTGTTGTTTGGACACTA
GTCTGTGAATAGGGGCATGGTGTGGATACATGTCACAATGGTTATCAGGT
AGCTTCACCCTTTGAGGACTTTGGCCTTCTGTTTGGACACTAGTCTATAG
GAGCATGGTGTGGATATGTGTCACAAAAGTTTTCAGCCAACGTGCTCGTA
ACCCAATGGTTGCCAGGTAGCTTGCCGTTTGAGGACATGTAGCTTTTTGT
TTGGACACTACGCTACATCTAGGAGCATGGTGTGGATACGTGTCACAATG
GTTGTCTGCAGGCAACTTAGCGCTTTGAGGATGTTTAACTTTTTGTTTGG
ACACTAAACCAAACTGTACTGATCGATATTCCATCGCGGATTCCCTCCCC
CGCCTTCGGCAGCCTCTGCATGGCCTGCAGCCACTGTTGGCCGTGCCGTG
CCCCGGCCTACTTTGCCGGTCATGTCTTCCCTCAACCCCGGCCGGCCATC
CTTGCTCCCGGCGGTGAAGTTCCTTTCGCAGGGGAGGCGGAACAAGCAAA
AGGTCGGTGTCGGCTCGTGGGTTGTGTGGTGTGTGTGTGTGTGTGTGTGC
GCGCGCGCGCGCGCGAATCTGTGCTCGTTATTTGCGTACTGCGGGTACGG
CCGGCCATCCTTGCTCCCGGCGGTGAAGTTCCTCGCGCAGGAGAGGCGGA
GCAAGCGAAAGGCCAGCGATGATTCATATCATTTGTAGTGAGCTAACTGC
TGCTCCGTCTCGACCGAGGCGCGTGGTCAATGGTTGCGGGACTACGGCAA
GCACCTCGTGAGTACATATATACTACGTAGTATATATATGATGAGGTACA
ATCGCACGCGTGTGAGGTTGAGTGTTCTCGTATTAGTGGCTATCACATTT
ATGTATTGAGTGTTCTCGTATTAGTGTTTATCACATTGAAGAATTTAACA
CGAAAAACAAAAGGTCGGCGCTGGGTTGTTAGTTGTGTGTGTGATGATGC
GCGCATTTTTTGTGCAGAGTTCTGCGGTTTCACTGGCATCATATGGGGTG
TCAGTGTGGCGAGAGACATGATGCGATGCGCTGTGATGTGATGTGATACT
CGAGCACGGGCAGTGCGATGTGATGCATGCTCTAAACGTACAGTAGTTTG
ACATCACATCACATCACATGGGATGTCATGTCGTGGGGGTGTGTGTTTGT
GTGTGACTATGTGCGTTCAGTATGGCTGCGACAGGCAACCCTTGAGTACC
CCCCCCCCCCCCCCTTCTTCCTCCTCTGCAGCTCACAAGCACGGCCACAT
TCGAGAATAGGAGACAGTGCTCTGTCCTGAAGGTTCCCCCCTGTGAGCCG
AATGGTCAGTGGCCATACTGTATGACTACAACAGGCAATTCATGAGTACA
CCCCCCCCCCCACCCCCCCACCCCTTCCTCCTCCGCAGCTCGCAAGCACG
GCCACATGGACACCTGTGGAGGCGGACATGGGGGCAGCAGAAGGTGTTAA
GATCGTCGAAGCCCCCGGGAAGGGCATCATGTCAGACATCAAGGCAAAGG
CACCGCTGTATAAGTCGGACATCACGGACGGCCTTAACCTCAAGGTCAGG
GGCATTCATTCGTGGCTGTGATTCCTATAAATTGTACTTCCTGCTCCGTC
TCGAACGAGGCGCGGGGTCAATGGTCTCGGGACTACGGCAAGCACCACGT
GAGTACATATATATATATATGTAATACTTCCAAGTACCGAGGCACAATCG
CACGTGCTTGTGCTTGAGTATTCTCGTAATAGTGGCTACCACATTTAAGA
ATTGAGTGTTCCCGTATTAGTGTTCGTGGCGTTCGTGGCTTTTTTTAGGG
CTGTGGTGTGATGTCAAACTACTTGTACAAGTCGGACATTACGGACGGCC
TTAACCTCAAGTTCAGGGGTGTTGATTCGTGCTTTTTTTTTTTAGAGCTG
TGGTGTGATGTCAAACTACTTTGAAGATGTACTGTAAGTACTGCAAGGCC
GAAACTGTTGGACATTATGAACGGCCTTAACCTCAAGGTCAGGGGCGTTC
GTGGTGTGATGTCAAAATTATGTACTGTATAGTGAGTGATGTTGAACTAG
TGCTGCATATACTGTACAATGGGCGTCATGTCAGACGTGAAAGCCAAGGC
ACCGCTGTATGAGTCGGACATCATGGATGGCCTTATCCTCAAGGTTAGGG
GTGTTGATTCATGTAAATTGTAGCGAGGAACAATCGCACGTGTGTGATAG
TTAGTGTTCTCGTACTAGTGGCTATCACATGCAAGAATCGAGTGTTCTCA
TATTAGCGGTTAGGGCATTCGTGGCTGTTTTGAGGGCTGTGGTGTGATGT
CAAACTATGTACTGTACAGTGATGTGATGCGATGCCAAACCATGTACCAG
TACTTCTACAGGCCCCGGTTGACCTCGAAGTGCCAACCCTGACCACCCCT
GCCGCTGCCGCTCCCAGGTGTTGTCGTCGGTGTTCTTCCTCTTCTTCGCC
TGCCTGGCCCCGGCGGTGGCCTTCGGGGGCCTGCTGGGCATCGTCACCGA
GGGGGCCATGGGTCCCATCGAGGTACGGGGTAATCTTTGAGTAGGTTTTT
AGTGGACTTGCGTGAGGGGCTTCCGGGCCCTGCATAGCGGTAACTATTAG
TAGTTTTTTAGTGGAGTTGTGCGAAGGAGTTCCGGGCCCTGTATTCACAC
CATTAGGAACGCTCGCTGAAAATCTCGTCGGGTTTGCGTTCGGGCCACCG
AAACCCACCAAGATTTTCGCGGTGCCATGACTTTATCCGGCGTCGCCCTC
GCCGTTAGCCAATCAACGGCCGGAATGACCAGAAACAGGACCCCAAAACC
CAGGGTGCGGACGAAACTCTGGTGTCGGCATGCAGGGGAGGCGACAAAAT
ATTTGGCATGTTTCCACGGGTCACCGTGTTTTCGGTGGGACCTAATGGTG
TTAAAAGGTAATTTTGAGTAGTATTTTGGTGGATCTGCGCGAGCGAGTTC
CGCGCGCCCTGCCTAGAAAATGACACTCAGTCTCCTTGCGGTACAAGTAT
ATGTAGTATCTTGAATCGTAGAACGGAGTATCCTTTTTAGCTACTCGGGT
GTGCATTGACACGATATCTTACTGTACGGTAGTGTCAACGGGAACAACAC
AGGGCGAGGTGCAGGCCACATCACTAAAGACCTCAACAGTGGCCCTTCCT
TGTAGCTCACCAGGGGGAAGTTGTGCTGGGAAGGGGACAAAAGGAGGAGG
GTGGGGAGGAGGAGAGGAGGAGGAGGGGGAGGGGGAGGGGGGAGGGGAAG
AGGAAGGAGAGTATATACAGTAGTCTTGAATGGTAGAACAGAGTCTCCTA
CTAGCTGCTCGGGTGTATTGACACGATCTCCTACTCTACGGCACTACCTA
CGAGTACAACTCTTTCGTGCATTTTACTCCCCCAAGCCCCTCCTCCGGAT
AATGGAGTCTCCTATTAGGTCCTCGGGTGTACTGTACAATATTGACACGA
TCTCCTACCGCACGGTAGGACAACTGTTTCTTGTATTTTACCCCCCCCCC
CGGGGCCCTTCCTCCGGGATAATGGAGTCTCCTATTAGGTACTCGGGTGT
ACTGTACAATATTGACACAATCTCCTACTGTACGGTAGTACAACTGTTTC
GTGCATTTTGACCCCCCCGGCCCCTCCTCCGGGAATGCCCACCCCTCGCC
GGCCGCTCCAGATGATCGCGGGTACGGCCGTCAGCGGCATTTTGTACGCC
CTCGCGTCCGGGCAGCCGCTGACCATCATCGGCAGCACGGGGCCGGTGCT
GGCCTTCATCGCGGTGCTGTACAAGACGGCGGGGAGGCTGGTGAGCAGAG
AAAAAGCGAAAAAGAGCATTCTGCGTGCCCCGCTCCCTTTCCTCTATCCC
CCCCCCTCTCTCTCCCGCTCTCACTCGCTCTCTCCATGTCTCTCACTCTC
TTTCTCCCCCTCTTCATTTACTCTTGCAATAGACTGTCGGAGGGCAAACC
CGAAGTTTCGACTTAGGGCTGTCGGCATTGCACTCACGGTTATGTCGCAA
GACAAACCCATGAGTACATATATATATAATAGAGAAAGCGAAGAAGGGCA
GTTCTGCGTCTCCCGCTCCCTTGTACCGAGAGAACCTTCCCTCACTGCGC
CCTCACTCACTCTCTCTCTCTGTCTCTCGCTCTCATTCTCCCCCCTTCAT
TTACTCTTGTAGTTCCGTCTCAATCGACGTGCGTAGTCAATTGTCTCGGG
ACTACGGCAAGCACAATGTGAGTACATATACCAAATGGAGAAAAGCGAGG
AAGGGCAGTTCTGCGTGTCCCGCTCCCTTGCACCGAGAGACCCTTCACAC
CCGGGGGGCTGCACAGTAAAGCATGTGTGAATGTCAGCAAAGCATGTGTG
AACTACAGTAAAGCATTTGTGAATTGCAGTAAAGCACCTGTGGTCGGGGT
CTGGCTGTTTCGCCCGAGTTTTGCTGGCCGTTGCGGTGTGTCGGAGCTGT
GATAAGTTTTGTTTCAGTTATTTTGCCGTGGTTCCTAATGTCCTACCACT
ACGTATTGCAAGTATCATCGGCATAGCCACGACCTGCTCCACACACGCCT
CTCCTCGTCACCCTCCTGCTTGTCCTCCTCCCCCTCCCCCTCCCCCTCCC
CCTCCTCCTCCTCCCCCCCCTCCTCCTCCTCCTCCTCCTCCTCCCTCCTC
CCCCACCCCCCCCTCCACCGCCGCCGTCCCCTCTTGCTCGCTCCCTCCCT
CTCACAACTACCGGCAGGGCCTGCCTTTCCTCCCCATGTACGCGTGGGTG
GGCTTCTGGACGGCCGGCATCCTCGCAGCCTGCAGGTAGGCTTGTATTTC
GAAGTATTAACGTTACGCTACGCAATGATCGGTGTGGGTTTAACTAACTG
ATTGTGGGCGAAGTCCAAGCAACCTCGCCGGAGCCTGCAGGCAAGCTTGT
ACTTCGAAGTATCTTAAGAAACAACGGGGCGACCTACAGGCCACATCACT
AGAGTCCTCAACGATGGGCCTCCTTAGGTCGCCAGGGGAAGTCATGTCAA
AGTATTAACATTACCCGACGCAATGATCGGTGTGCTTCCAACTACCCGAT
TGTGGGCAAAATCTAGAGTACAAGAGTGCGGTGTAGGCGGGCGTGGGGCG
GCAGCCCTTGCCGAGTGCGGCATGGTATTGGAATGCACAGTGCGACTACT
GCAGTGCGCTGTACTTCGGTGAAACATGCAGCGGCACGATGTGCTCGCGC
TGGGCTCCCCGCCTTGGCACCGGCGGATGCTGACATATATGCTGGTCTTC
TTTCCCGCCACGTCACGTGTGTTCGAGCGGCAGCACCCTTTTCTTGGTGT
CCAACATGGTGGTATACTTCAATTCTTTAATGGGACAACTGCTAGTACGA
GAACGCTCAATCTCACACACGTGCAGTTGTACCTCGTTACAATTCATGTG
AATCACAGCCCTTTCTCGGTGTCCAACTATACTTCACCCCCTAAATTAGA
GGTAGCTAGGGACAATTATACGTATAATGAAGGTGAATTAGGCCCTAATT
AACCTCTAAGTGCCAACCCTAAAGAAATGTGGTCTTCTTTCCCATGGCCA
CGTGTGTTTGCGTGGAACCGCGGCAGCCTTTTCTCTGTGTCCAACATGGT
GGAATACTTCACCCGCTTCACGGACGAGATCTTCTCGCTGCTCATCTCCG
TCATATTCATCCTGGAGGCCTGCAAGGACATCGCGGGTGAGTGCTCTGAT
GCGGCTTGAAGTGATGTCAAGCTGCCATTGCAGTGTACAACTACAAGTAC
TTCGATTGTTACGAGCACGTAGTTACTGCCATGTGCTCACGATGTGCTCC
TCCTCCTCCTCCTCCTTCTCCCCCCCTCCTCCTCCGCCTGGTCTCCTCCT
TGTTGTCCTTCTCTGCTCCTCGTCTTCCTCCTCCACCACCCCTACTCCCT
CCTCCTCCTCTTCCTCCTCCACCTCCTCCTCTGCCTGCTCTCCTCCTTCT
CGTCCTTCTCCGCTCCTCCTCTTCTTCCTCCTCCCCCCCCCCCCCCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCCCCCCCTCCCCCCCCTCCCCCCT
CCCCCTCCTCCTCCTCCTCCACCCCCACCCACTCCTCCTCCTCCTCCCCC
ACCCCCTCCTCCTCCCGCTGCTGCTGCTGTGCCGCCGACGCTACGGCGCA
ACCGACAGGGGGCTTCACCAACCCGGCGGTGACCTTCACCAAGGCCGTGT
CTTCTCTGGTGATCGCCCTGCTCACGTACAACACCGCCACCATATTCAGG
GGGCTCCGGGGGTGAGAGCACACACACGCACGCGCACGCGCGCGCGCACA
CACACACACACACACGGAGAGCGGTTGTCCTCTTTTGTCCCCCCAGGGCA
TGCGTAGCGCTGCTTGTTCTGGAAGTTGTTAGGCCGGCTCCAAGCCTACA
CTGCCCGTTGACGAGAACCTTTCTCCAGGATAAGGTCGGGGAGGAGGGCA
GAATAGAAACTTACCCTCCAACCACGGCCACCCTCAGACTTGAACGCAAC
CAAATGGTTGGAGCGGGTGGAAGCGCAGTCCATGTGTGTGAAACTGTCTG
CTTGCGGAGATGGGCTGTGTGCGTACTGGGGCAATGCCTCTCCGGCAAAT
ACCTGGAAGGGTTGTGCGAGTAGGGCACTTCCGAGCAGTAGTTAACCAAC
CCTTAGTGGAGGACGATACGTCACCCCTTCAAGGACGAGCGGACACTTGG
TGTGGTGTGTAGAGTACTCTACAGCAGTTTTAGTGGCGGGACACTGATGT
GGTGTGTGTACCGTACTCGTCGGAGAGATCTTGCCCCCCCATGCCGATTT
TCGGGAGAACTTTTCTCGCCGAATACTGGCCGGATTCGCGCAGGAAAACT
CGGAAAATCTCCCTCAGGACCCGGGGGAACTTTTTGTAAGAGTTTTTGGG
ACAATTCGGGACCTGCCAAGCGAGAAACATTCCGCCGAAAACTGTCACGT
GGGGGCAAAATCTCTCCGACGATTACGGTACTCTACAGTGGTTTACGGTG
GCATGAGATCGTGTCACATTCTGTTGGCGGGCACTGTTGCGATGTCACGT
GATGTGTGCTCTGCCCCTCCCTTGCCTGCCCTCCCCTCCTCTCCGCTCCC
CTCCCCGCGCCCCCCTCCCCTCCCGTCCCCACCCACCGTCCCCTCCCCCC
CTGCCCCACGCAGGACCCCGTACATGGTGAAGCCCGTGCGTGAGGTGCTG
GCGGACTTTGGCCCCACCATCGGCGTCTTCAGCGGCATCTTCGCCGCCGT
GTGGGCCAAGGCCAAGTGAGAGGACTCGCGCGCGTGCACGCATGCATGCA
GGCATGCGCACATTCGAAGAACGCACAGCTCATGAGGCCGCCGTGCATGC
AGCCCCCCAAACCAACCAACTGCACACACATGCGATAGCCACTAGTACGA
GAACACTCAATCTCACACACGTGCGATTGTACCTCGTTGCAATTATATGA
GTCACACACACGCGCATGCACGGGGTCACGCTCATGGGGGCACATATGCG
TGCTGCATGCCGTGCCCGTGATACGAGAACGCTCAATCTCACGCACATGC
GATTGTACCTCGTTACAATTTATGTGAATCGCCGTGCCCGTGGCAGGTAC
GGGCTGGTTTTGCCCACGCTGAACGTCCCGGCTTCCTTCACCACCACCAT
CGGCCGCCCGTGGCTCGTGCCCGTGTTCAGGTAAGGGGCTACTGTTTGTG
ATGTGATGTGCTCACAAAAGCACTGTAGTTTGACACCACACAACACCACA
ACAAATCATTGGTGTGTTTGTGTGTGTGATGTGATGTGATGTGTACACAA
GGATGCTGCAAGTAGGTTGACATCAATCGCACCGCGGGTGTGGGTCATGT
GATGTGATGTGTACGCAAGGATGTTGGAAGTAGGCTGACAGGACATCGCA
TCGCGGGTGTGGGTCATGTGATGTGATGTGACGTGATGTGTGCACAGGGA
TGCTGGAAGGAGGTTGACATCACATCGCATCGCCGGTGTGGGTCACGTGA
TGTGATGTGATGTGTAAACAAGGATGCTGCAAGCAGGTTGACATGACATC
ACATCGTGGGTGTGTGTGTTTGTGTGGGTTATGTGATGTGACATGGTGTG
CACATCGCCACCAACCCCACTACCGCCGCCACCACCGCTCCCACCGCTGC
TGCAACCACCACCAATGGCAGCCGCCGTCGCCTTTGCCACCGGCACTGCC
AACCACAACCCTATCAACAACCCGCCAACAACAACACCACGACCACCATG
CCCCCTCCCTGTGCAGCCTGCCTGTCTGGGCGCGTTTTGCCGCGGCCGTG
CCGGCCCTCATGGCTAGCGTCCTGCTCTTCATGGACCAGAACATCACCGT
CCGTCTGGTCAACTCCAAGGAGCACAAGCTCAAGAAGGGGTGAGTGAGCC
GGCCGTCAGTGACGGAATATCGAAGAAAATCAACCTATTTATCGACAGTA
CTGATCTACGAGTATGCATTTATCGATAGTCGATATTCGATAGTTTGACC
CACACTATATCCAAGTAGTTGGTAGCGTGCTGCTCTTCATGGACCAGAAC
ATCACCGTCTGCCTCGCCAACTCCAAGGAACACAAGCTCAAGAAGGGGTG
AGCCGGCCAGGAAAGCCCGGCCCCCGCTCATGCGCCGCTGACCATGGCGG
GACGCGTCTTGAGGTGTCCCGAGGTATCCTGCCGGTAAAAAAACGGCATT
CTGTTCTACTACGCCCTCCTGTCTGTTTGTATTGAAACAGCCTCGGGGGA
TGGCGGACGTGTCCTTGCCCTTCCCTGTTGCCCGATCGTGCTAGAAAAAC
ACCTGCGCCTGAAGAACCCTACGACATTGAATCGGGGGCTCGCACACACC
CACGCCCACACCCACCCACACATACGCCACGCCGGTTCCTTGGGTTCGAA
CAGGTACGAGATGCACCTGGACATGCTGATGATCTCCAGCATCACGACTC
TTAAATGGGATAGCCCCACTAGTACGACAACACTCAATCTCACACACGTC
CGATTGTACCTCGTTACAATGAGTATGGATCACATCCTTATTTTCTGTCG
GTTTCGAACAGTTTCGGGATGCACCTGGACATGCTGATGATCTCCGGCAT
AACGGCGGTGTTCAGACATGTGCAATCGTAACTGTTACTTCGAGGTACAA
TTTTATGAACCACCGCCATCTTTCCTTTGTTTTGAACAAACAGCTACGGG
ATGCACCTGGACATGCTGATGATCTCGGGCATTACGGCGGTGTTCAGCGC
CCTGGGCATGCCCTGGCTGGTGGCCGCCACGGTGCGCTCGCTGGCGCACG
TCAAGTCGCTGGGCGTGTACGAGCAGAAGGAGGGCAAGGAGGTCATTGCG
GGGATGACTGAACAGAGGTAAGTGAATAGTTTACAGTTTTGTAGTTATCC
TAGTTAGTTAATGGGACTATTCCAAGTACAGTCGTTGGCGTACGTCAAGT
CACTGGGCGTGTACGGGCAGAAGGAGGGCAAGGAGGTCATCTCGGGGATG
ACTGAGCAGAGGTGGGTGAATTGTTAATGGGACTATCCAAGTAGCTATGG
CTGAACGGTTGTAGCGGTTTTGGTTCAGGAGTTATTCCTACAGTACTTGA
TGGGACTATGCAAGTAGTTATGCAAGACAAGCCAATGAGCACTGTCGCTG
GGGGTGTACGAGCAGAAGGACGGCAAGGAGGTCATCGCGGGGATGGCTGA
ACAGAGGGGGGTGGGTGAAAAGGTTTGGCTTGGTTCGGGAGTTATCCTAG
CTATTGGGACTATCCAAGTACATAGCTATGCAAGGCAAGACAATGAGTAC
TACTAGTACACTAGTACTGTACTGTAGTACATGAGTCGCTGGGCGTGTAC
GAGCCGAAAGAGGGCAAGGAGGTCGTCGCAGGGATGACTGAACAGAGGTA
GGTGAAAAAGGTTTGGTTCGGGAATTACAGTGCAGTCGTTGACGTGCGCT
ACCTACTTGGATCAAGTTGCTGGGCTTGTACGAGCAGAAGGACAGCAAGG
AGGTCATCTCGGGGATGACCGAACAGAGGTGGGTGAAACGGTTTGGTTCG
GGAGTTATCCTACTTTGAAGTAGTTGCGGGGCTATCCAAATAGTATTGCA
AGACAAGCCAATGAGCACTACTGTAGTACTCAAGTACATGTATATCGACG
TAGACGTAGCTAGTTAATGACACTGCTCAGTACCATACAGTAGTGCAATA
AACGGCTGACTGCTATCCATACACGCGCCGCTGAAAAACAAACGCCTCCC
TGCGTCAGTACAGCAGCACTAACGTACTCTAACGTACTACTTCGTATCAA
TAGTGCAACGTACTACTGCAGTACTCGTACAGCACTTGCACTGCAGTTTG
CAGCACAGCAGTGGCGACCTGTATCGCATATGCCTTCGTCAGAACGCCTG
GTCAGACCGAGTGAGACTTTTCAACAAAGTACTTCGAAGTACTCGTACTG
AAAAACAAACGCCTCCCCGCGTCTTTTGGCAGGGTGAGCGGCATGGCCAT
CGATCCACACCCTCATCGGCAGCTCCATCCTCAAATGGGGCCCTGAACTC
GCGTATGTACAGCAAGAACACCTATTCTTTCCCACTCACTTGTTTATCTT
CTTGCATAAACCACAAACGCCTCCTCACGTGCGCCGGCAGGGTGAGCGGC
GTGGCCATCCATGCCCTCATCGGCAGCTCCATCCTCTTTGGGGCCCTGAG
CTCGTGTATGTACGAGTACAGTGAGAACACCCCTTCTGTCCCACTCGCTT
GGTAATCTTCTTGCAAAAACTAACAGACAAACGCCTCCCAATGTCTGCTG
GCAGGGTGAGCGGTGTGGCCATCCACACCCTCATCGGCAGCTCCATCCTC
TTCCTGCGCCCCCAGCTGGCCCGGGTGCCCCTGGCCGTGCTCATGGGCCT
CTTCCTCTACCTCGGTGTGTCGGGCCTCAAGGGCAACCAGCTTTTCGACC
GCACTAAGCTGCTCGTCACGGACCCCGAACTCCGCCCCAAGGTGAGTGTG
TGTGTGTGCGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCACGCGTGTCGG
GCCTCAAGGGCAACCAGCTGTTTGACCGCACTAAGCTGCTCGTCAGTTCT
TCCCGACATAGTCGACCCGAACACACTGTAAATTCGACACCTAAGCTTCT
CCAATTTCCTGCAACGTGTCATTCTTTCGTGGCAGCGCCAATAGGTTTTT
GTGCAGACAATGAACCACGTGTCACAATCGCATGGGCCAACTCGAACCCC
CCGTACCCACCCCACCCCTGCCGCCTCTCCTCCGGCGCAGGCGCCCTGGA
CCACCGACATCCCCATGAAGAAGACAAACATCTTCACCCTCATTCAGCTG
GCGTGTCTGTGGGGCATGATGTGAGTGGCATTTTAGTGTGTCTGTCATTT
ACTGGGGAGGGATCCCGAAGTGGTGCCATGTGATTTAACTGACAAACTGC
GGCGCCGCAGAGTGTTCATCACATCACATCACATTGCCTCCTGCCTGCTT
CGAGCCTAACCCTCCCCTGCCGCCTTAGTTCCCCTCTCGTCCCTCGCCCG
CCACCCGCCGCCGACGGGTGAACGAACGCGATCGAGCCTAACCCCCCCGG
CCTCTTTTTTCCCTCTCGCCCCTCGCCCGCTGAACGAATGCGATCATCGC
GCCTCTGTCGTGCCGCTGCCTCTGCCTCTGCCTCGGCCGGACTGCCTGGA
CGCCTGCTCCAGGTGGGTGAAGGGGAGCCCCATCGGCGTGCTGTTCCCCG
TGATAATCGCGCTCCTGGCGCCCATCCGCTTCGCCCTGGAGCGGCCCGGG
TGGTTCAGCAAGAAGGAGATGGCCATCCTGGACACCGAGTAGGGGATAAT
CGTACGAATACACGACGTAAACGTACGAGTCGTTCAGCAAGAAGGAGATG
GCCACCCTGGACACGGAGTAGAGTAGAATCAACCGCCGTACGTCGTGGAC
CGGGTGCCGCGGCCGCCGCCGCCGCGGTAAAAAATATATATATTATAGCC
GAACTCGTAGAGTACAAGTATACTAAACATCTGAATCCGACTCAAAAATG
GAGAGCGACAGCGACCGTGACTCGTAAGAGTATCTAAGCGTTCGAGTCGT
GTACGTATACTTCCAAGAAGTATATGGAGAGCGACACCGACCTTGACTCG
GACGTCCAAGTCTGAGTCCCGGGCCGCCCTGGGCCGCCCGCCCGGCCCAG
CCACCCGCCGTGGCTGTGTGCACGTCATGTGCATGTGCTGACTCGGATCG
GGACCGGTGCTCGTCGATGATCGCGAGAAGAGGGTGGGATATCAACTGCC
TGCCCGCTCGCCCTCCCACCCGCTAGTGCGGAGGACGAAAGTGGTCGTGA
TGGTTCCCTCAAGTTGTGGCTGGTGGGACGGAGGGAGTGCCATTGCTCAT
GACGTACGAGTCTATTCAGGCTAGTCGAGTGTGGGGGACGACCGTGGTCG
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig13:1067857..1081356-

>mRNA_S-ischiensis_contig13.2966.1 ID=mRNA_S-ischiensis_contig13.2966.1|Name=mRNA_S-ischiensis_contig13.2966.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3618bp|location=Sequence derived from alignment at S-ischiensis_contig13:1067857..1081356- (Schizocladia ischiensis KU_0333)
ATGGCTGCGGCTGTGGCCATGTCAGTGGCCTGGCTTGCCGGAACCGCCCA
ACCTTCGCTGGCGTTTGGGCTGGGAGCGGCACGAATCAACCCCTTGGGGG
CAGCGGGCCGTGCATCAGATGGCTGCGGCTGTGGCCATGTCAGTGGCCTG
GCTTGCCGGAACCGCCCAACCTTCGCTGGCGTTTGGGCTGGGAGCGGCAC
GAATCAACCCCTTGGGGGCAGCGGGCCGTGCATCAGCCTCTGCATGGCCT
GCAGCCACTGTTGGCCGTGCCGTGCCCCGGCCTACTTTGCCGGTCATGTC
TTCCCTCAACCCCGGCCGGCCATCCTTGCTCCCGGCGGTGAAGTTCCTTT
CGCAGGGGAGGCGGAACAAGCAAAAGCCTCTGCATGGCCTGCAGCCACTG
TTGGCCGTGCCGTGCCCCGGCCTACTTTGCCGGTCATGTCTTCCCTCAAC
CCCGGCCGGCCATCCTTGCTCCCGGCGGTGAAGTTCCTTTCGCAGGGGAG
GCGGAACAAGCAAAAGCTCGCAAGCACGGCCACATGGACACCTGTGGAGG
CGGACATGGGGGCAGCAGAAGGTGTTAAGATCGTCGAAGCCCCCGGGAAG
GGCATCATGTCAGACATCAAGGCAAAGGCACCGCTGTATAAGTCGGACAT
CACGGACGGCCTTAACCTCAAGCTCGCAAGCACGGCCACATGGACACCTG
TGGAGGCGGACATGGGGGCAGCAGAAGGTGTTAAGATCGTCGAAGCCCCC
GGGAAGGGCATCATGTCAGACATCAAGGCAAAGGCACCGCTGTATAAGTC
GGACATCACGGACGGCCTTAACCTCAAGGTGTTGTCGTCGGTGTTCTTCC
TCTTCTTCGCCTGCCTGGCCCCGGCGGTGGCCTTCGGGGGCCTGCTGGGC
ATCGTCACCGAGGGGGCCATGGGTCCCATCGAGGTGTTGTCGTCGGTGTT
CTTCCTCTTCTTCGCCTGCCTGGCCCCGGCGGTGGCCTTCGGGGGCCTGC
TGGGCATCGTCACCGAGGGGGCCATGGGTCCCATCGAGATGATCGCGGGT
ACGGCCGTCAGCGGCATTTTGTACGCCCTCGCGTCCGGGCAGCCGCTGAC
CATCATCGGCAGCACGGGGCCGGTGCTGGCCTTCATCGCGGTGCTGTACA
AGACGGCGGGGAGGCTGATGATCGCGGGTACGGCCGTCAGCGGCATTTTG
TACGCCCTCGCGTCCGGGCAGCCGCTGACCATCATCGGCAGCACGGGGCC
GGTGCTGGCCTTCATCGCGGTGCTGTACAAGACGGCGGGGAGGCTGGGCC
TGCCTTTCCTCCCCATGTACGCGTGGGTGGGCTTCTGGACGGCCGGCATC
CTCGCAGCCTGCAGGGCCTGCCTTTCCTCCCCATGTACGCGTGGGTGGGC
TTCTGGACGGCCGGCATCCTCGCAGCCTGCAGCCTTTTCTCTGTGTCCAA
CATGGTGGAATACTTCACCCGCTTCACGGACGAGATCTTCTCGCTGCTCA
TCTCCGTCATATTCATCCTGGAGGCCTGCAAGGACATCGCGGCCTTTTCT
CTGTGTCCAACATGGTGGAATACTTCACCCGCTTCACGGACGAGATCTTC
TCGCTGCTCATCTCCGTCATATTCATCCTGGAGGCCTGCAAGGACATCGC
GGGGGGCTTCACCAACCCGGCGGTGACCTTCACCAAGGCCGTGTCTTCTC
TGGTGATCGCCCTGCTCACGTACAACACCGCCACCATATTCAGGGGGCTC
CGGGGGGGGCTTCACCAACCCGGCGGTGACCTTCACCAAGGCCGTGTCTT
CTCTGGTGATCGCCCTGCTCACGTACAACACCGCCACCATATTCAGGGGG
CTCCGGGGGACCCCGTACATGGTGAAGCCCGTGCGTGAGGTGCTGGCGGA
CTTTGGCCCCACCATCGGCGTCTTCAGCGGCATCTTCGCCGCCGTGTGGG
CCAAGGCCAAGACCCCGTACATGGTGAAGCCCGTGCGTGAGGTGCTGGCG
GACTTTGGCCCCACCATCGGCGTCTTCAGCGGCATCTTCGCCGCCGTGTG
GGCCAAGGCCAAGTACGGGCTGGTTTTGCCCACGCTGAACGTCCCGGCTT
CCTTCACCACCACCATCGGCCGCCCGTGGCTCGTGCCCGTGTTCAGGTAC
GGGCTGGTTTTGCCCACGCTGAACGTCCCGGCTTCCTTCACCACCACCAT
CGGCCGCCCGTGGCTCGTGCCCGTGTTCAGCCTGCCTGTCTGGGCGCGTT
TTGCCGCGGCCGTGCCGGCCCTCATGGCTAGCGTCCTGCTCTTCATGGAC
CAGAACATCACCGTCCGTCTGGTCAACTCCAAGGAGCACAAGCTCAAGAA
GGGCCTGCCTGTCTGGGCGCGTTTTGCCGCGGCCGTGCCGGCCCTCATGG
CTAGCGTCCTGCTCTTCATGGACCAGAACATCACCGTCCGTCTGGTCAAC
TCCAAGGAGCACAAGCTCAAGAAGGGCTACGGGATGCACCTGGACATGCT
GATGATCTCGGGCATTACGGCGGTGTTCAGCGCCCTGGGCATGCCCTGGC
TGGTGGCCGCCACGGTGCGCTCGCTGGCGCACGTCAAGTCGCTGGGCGTG
TACGAGCAGAAGGAGGGCAAGGAGGTCATTGCGGGGATGACTGAACAGAG
CTACGGGATGCACCTGGACATGCTGATGATCTCGGGCATTACGGCGGTGT
TCAGCGCCCTGGGCATGCCCTGGCTGGTGGCCGCCACGGTGCGCTCGCTG
GCGCACGTCAAGTCGCTGGGCGTGTACGAGCAGAAGGAGGGCAAGGAGGT
CATTGCGGGGATGACTGAACAGAGGGTGAGCGGTGTGGCCATCCACACCC
TCATCGGCAGCTCCATCCTCTTCCTGCGCCCCCAGCTGGCCCGGGTGCCC
CTGGCCGTGCTCATGGGCCTCTTCCTCTACCTCGGTGTGTCGGGCCTCAA
GGGCAACCAGCTTTTCGACCGCACTAAGCTGCTCGTCACGGACCCCGAAC
TCCGCCCCAAGGGTGAGCGGTGTGGCCATCCACACCCTCATCGGCAGCTC
CATCCTCTTCCTGCGCCCCCAGCTGGCCCGGGTGCCCCTGGCCGTGCTCA
TGGGCCTCTTCCTCTACCTCGGTGTGTCGGGCCTCAAGGGCAACCAGCTT
TTCGACCGCACTAAGCTGCTCGTCACGGACCCCGAACTCCGCCCCAAGGC
GCCCTGGACCACCGACATCCCCATGAAGAAGACAAACATCTTCACCCTCA
TTCAGCTGGCGTGTCTGTGGGGCATGATGCGCCCTGGACCACCGACATCC
CCATGAAGAAGACAAACATCTTCACCCTCATTCAGCTGGCGTGTCTGTGG
GGCATGATGTGGGTGAAGGGGAGCCCCATCGGCGTGCTGTTCCCCGTGAT
AATCGCGCTCCTGGCGCCCATCCGCTTCGCCCTGGAGCGGCCCGGGTGGT
TCAGCAAGAAGGAGATGGCCATCCTGGACACCGAGTAGGTGGGTGAAGGG
GAGCCCCATCGGCGTGCTGTTCCCCGTGATAATCGCGCTCCTGGCGCCCA
TCCGCTTCGCCCTGGAGCGGCCCGGGTGGTTCAGCAAGAAGGAGATGGCC
ATCCTGGACACCGAGTAG
back to top