mRNA_S-ischiensis_contig13.2883.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig13.2883.1
Unique NamemRNA_S-ischiensis_contig13.2883.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig13.2883.1 vs. uniprot
Match: D8LQW1_ECTSI (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW1_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 8.730e-125
Identity = 176/257 (68.48%), Postives = 209/257 (81.32%), Query Frame = 1
Query:    1 EAKGGGVGEGGTSQVAKRNRDDDGTGPITLDGERPQKRFYRARAHCNPLSHNSSFKPPASPEEMDWSVHYPQLTDPQVRIVDMGCGFGGLTVALARMFPDKAVLGTEIRAKVCEFVRLRIQALRKEHPGEYQNGSALRTNSMMLMPNYFRRAQLEKMFFCFPDPHFKAKNHRRRIISGPLLTEYAHFLKPGGILYTITDVEELHKWHEAKADAHPCFQRLNKWEMEADPSVAVMVEVTEEGKKVARSGGKKFWAVYR 771
            EAK GG   G   +  KR+ DD  TGPIT++G  PQKRFYRARAH NPLSHN  ++ P +P+EMDWSVHYP     +V IVD+GCGFGGLTVAL+ +FPDK VLG EIR KVCEFVRLR++ALR+E+PG+YQN S+LRTNSM+L+P++  R QLEKMFFCFPDPHFKAKNHRRRIIS PLLTEYA +L+PGG+LY ITDVEELH+WH  KA+AHPCF+ + + E E DP+V  M EVTEEGKKVAR GG K+WAV+R
Sbjct:   31 EAKAGG---GPRGKAKKRSEDD--TGPITIEGAMPQKRFYRARAHVNPLSHNDCYEYPKTPKEMDWSVHYPNRPGLKVSIVDVGCGFGGLTVALSPLFPDKGVLGMEIRVKVCEFVRLRVEALRRENPGQYQNVSSLRTNSMLLLPHFLERHQLEKMFFCFPDPHFKAKNHRRRIISVPLLTEYAFYLRPGGLLYMITDVEELHQWHVEKAEAHPCFEAVPRGEAEKDPAVKAMTEVTEEGKKVARMGGDKYWAVFR 282          
BLAST of mRNA_S-ischiensis_contig13.2883.1 vs. uniprot
Match: A0A836CNR8_9STRA (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNR8_9STRA)

HSP 1 Score: 320 bits (821), Expect = 1.130e-107
Identity = 152/230 (66.09%), Postives = 180/230 (78.26%), Query Frame = 1
Query:   82 ITLDGERPQKRFYRARAHCNPLSHNSSFKPPASPEEMDWSVHYPQLTDPQVRIVDMGCGFGGLTVALARMFPDKAVLGTEIRAKVCEFVRLRIQALRKEHPGEYQNGSALRTNSMMLMPNYFRRAQLEKMFFCFPDPHFKAKNHRRRIISGPLLTEYAHFLKPGGILYTITDVEELHKWHEAKADAHPCFQRLNKWEMEADPSVAVMVEVTEEGKKVARSGGKKFWAVYR 771
            IT DGE PQKRFYR+RAH NPLSHNS+++ P  PEE  W+  YP + +P VR+VD+GCGFGGLTVALA++ PDK VL  EIR KV EFVRLRI+ALR+EHPG Y N + LR N+M+ +PNY  R QL+K FF FPDPHFKAKNHRRRI+S  LL+EYA FL+PGG+LYTITDVE LH WH A+  AH  F+ L+  E EAD  VA M E TEEGKKVAR+GG K+WAV+R
Sbjct:   18 ITKDGEMPQKRFYRSRAHVNPLSHNSAYRYPRCPEEAPWAQLYPGVDNPVVRVVDIGCGFGGLTVALAKLLPDKCVLAMEIRDKVAEFVRLRIEALRREHPGAYANAAVLRANAMVNLPNYLARGQLDKAFFAFPDPHFKAKNHRRRIVSDALLSEYAFFLRPGGLLYTITDVEALHAWHVARCGAHAAFEALSAEEAEADSCVAAMREETEEGKKVARAGGAKYWAVFR 247          
BLAST of mRNA_S-ischiensis_contig13.2883.1 vs. uniprot
Match: K3WL42_GLOUD (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL42_GLOUD)

HSP 1 Score: 320 bits (819), Expect = 1.980e-107
Identity = 147/225 (65.33%), Postives = 178/225 (79.11%), Query Frame = 1
Query:   97 ERPQKRFYRARAHCNPLSHNSSFKPPASPEEMDWSVHYPQLTDPQVRIVDMGCGFGGLTVALARMFPDKAVLGTEIRAKVCEFVRLRIQALRKEHPGEYQNGSALRTNSMMLMPNYFRRAQLEKMFFCFPDPHFKAKNHRRRIISGPLLTEYAHFLKPGGILYTITDVEELHKWHEAKADAHPCFQRLNKWEMEADPSVAVMVEVTEEGKKVARSGGKKFWAVYR 771
            ++PQK+FYR+RAHCNPLSHN SF+ P +P E+DWSVH+P +  P+V  +D+GCGFGGLTVAL  +FPDK  L  EIRAKV E+VRLR++ALR E+PG+YQN SALRTN+M  +P+YF + QL K+FFCFPDP FK +NHRRRI++  LL EYA+ L PGGILYTITDVEELH WH  K  AHPCF R+   E+ ADP V  M E TEEGKKVAR GGKK+ AV+R
Sbjct:   17 KQPQKKFYRSRAHCNPLSHNDSFQYPVNPSEVDWSVHFPNIESPKVDFLDVGCGFGGLTVALGALFPDKLTLALEIRAKVTEYVRLRVEALRAENPGQYQNISALRTNAMRYLPHYFTKGQLTKLFFCFPDPQFKQRNHRRRIVNTNLLAEYAYLLAPGGILYTITDVEELHNWHVEKCTAHPCFTRIPDEELSADPCVKAMTEETEEGKKVARGGGKKYVAVFR 241          
BLAST of mRNA_S-ischiensis_contig13.2883.1 vs. uniprot
Match: H3G8D5_PHYRM (tRNA (guanine-N(7)-)-methyltransferase n=20 Tax=Phytophthora TaxID=4783 RepID=H3G8D5_PHYRM)

HSP 1 Score: 318 bits (816), Expect = 5.670e-107
Identity = 147/223 (65.92%), Postives = 176/223 (78.92%), Query Frame = 1
Query:  103 PQKRFYRARAHCNPLSHNSSFKPPASPEEMDWSVHYPQLTDPQVRIVDMGCGFGGLTVALARMFPDKAVLGTEIRAKVCEFVRLRIQALRKEHPGEYQNGSALRTNSMMLMPNYFRRAQLEKMFFCFPDPHFKAKNHRRRIISGPLLTEYAHFLKPGGILYTITDVEELHKWHEAKADAHPCFQRLNKWEMEADPSVAVMVEVTEEGKKVARSGGKKFWAVYR 771
            PQK+FYR+RAHCNPLSHN  F  P +P+EMDWS HYP + +P V  +D+GCGFGGLTV LA +FPDK  L  EIRAKV E+V LRI+ALR E+ G++QN SALRTN+M  +P+YFR+ Q+ KMFFCFPDP FKA+ HRRRI+  PLLTEYA+ L PGGILYTITDVEELH+WH  K  +HPCF R+   E+E+DP V  M E TEEGKKVAR GGKK+ AV+R
Sbjct:   19 PQKKFYRSRAHCNPLSHNDCFDYPQTPDEMDWSTHYPGIENPSVDFLDVGCGFGGLTVKLAELFPDKLTLAMEIRAKVTEYVHLRIEALRAENSGQFQNVSALRTNAMRYLPHYFRKGQITKMFFCFPDPQFKARLHRRRIVHTPLLTEYAYLLAPGGILYTITDVEELHEWHVEKCSSHPCFTRIPDCELESDPCVKAMTEETEEGKKVARGGGKKYVAVFR 241          
BLAST of mRNA_S-ischiensis_contig13.2883.1 vs. uniprot
Match: A0A7S2DPP9_9STRA (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DPP9_9STRA)

HSP 1 Score: 317 bits (813), Expect = 1.620e-106
Identity = 148/231 (64.07%), Postives = 178/231 (77.06%), Query Frame = 1
Query:   79 PITLDGERPQKRFYRARAHCNPLSHNSSFKPPASPEEMDWSVHYPQLTDPQVRIVDMGCGFGGLTVALARMFPDKAVLGTEIRAKVCEFVRLRIQALRKEHPGEYQNGSALRTNSMMLMPNYFRRAQLEKMFFCFPDPHFKAKNHRRRIISGPLLTEYAHFLKPGGILYTITDVEELHKWHEAKADAHPCFQRLNKWEMEADPSVAVMVEVTEEGKKVARSGGKKFWAVYR 771
            PIT DGE P+K FYR+RAHCNPLSHN SF  P +PEE DWS  +P         +D+GCGFGGLTVALA  FPD++ LG EIRAKVCEFVRLRI+ALR + PG YQN + LRTN+M  +PN+FRR QL K+FFCFPDPHFKAKNHRRRI+S  LL+EYA+ LK GG LY ITDVE+LH+WH +KA AHP F+ L+  ++E D +   MV VTEEG+KVAR+G  K+W V+R
Sbjct:   12 PITKDGEMPRKCFYRSRAHCNPLSHNDSFSYPTTPEEFDWSALFPAKGGAPPDFLDVGCGFGGLTVALASQFPDQSTLGLEIRAKVCEFVRLRIEALRVQEPGSYQNAAVLRTNAMRYLPNFFRRGQLSKIFFCFPDPHFKAKNHRRRIVSETLLSEYAYALKEGGRLYVITDVEDLHQWHVSKATAHPMFEELSAEDLEKDQAAQAMVTVTEEGQKVARAGNAKYWTVFR 242          
BLAST of mRNA_S-ischiensis_contig13.2883.1 vs. uniprot
Match: A0A0P1B7Y4_PLAHL (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7Y4_PLAHL)

HSP 1 Score: 316 bits (810), Expect = 4.470e-106
Identity = 146/223 (65.47%), Postives = 174/223 (78.03%), Query Frame = 1
Query:  103 PQKRFYRARAHCNPLSHNSSFKPPASPEEMDWSVHYPQLTDPQVRIVDMGCGFGGLTVALARMFPDKAVLGTEIRAKVCEFVRLRIQALRKEHPGEYQNGSALRTNSMMLMPNYFRRAQLEKMFFCFPDPHFKAKNHRRRIISGPLLTEYAHFLKPGGILYTITDVEELHKWHEAKADAHPCFQRLNKWEMEADPSVAVMVEVTEEGKKVARSGGKKFWAVYR 771
            PQK+FYR+RAHCNPLSHN  F  P +P++MDWS HYP + +P V  +D+GCGFGGLTV LA +FPDK  L  EIRAKV E+VRLRI+ALR E+PG YQN S LRTN+M  +P+YFR+ Q+ KMFFCFPDP FKA+ HRRRI+  PLL EYA+ L  GGILYTITDVEELHKWH  K  +HPCF R++  E+ +DP V  M E TEEGKKVAR GGKK+ AV+R
Sbjct:   18 PQKKFYRSRAHCNPLSHNDCFDYPLTPDKMDWSAHYPNIENPSVDFLDVGCGFGGLTVKLAELFPDKLTLALEIRAKVTEYVRLRIEALRNENPGRYQNVSTLRTNAMRYLPHYFRKGQITKMFFCFPDPQFKARLHRRRIVHTPLLAEYAYLLASGGILYTITDVEELHKWHVEKCSSHPCFIRMDDSELLSDPCVKAMTEETEEGKKVARGGGKKYLAVFR 240          
BLAST of mRNA_S-ischiensis_contig13.2883.1 vs. uniprot
Match: A0A3R7J5R5_9STRA (tRNA (guanine-N(7)-)-methyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J5R5_9STRA)

HSP 1 Score: 315 bits (807), Expect = 1.320e-105
Identity = 146/228 (64.04%), Postives = 176/228 (77.19%), Query Frame = 1
Query:   88 LDGERPQKRFYRARAHCNPLSHNSSFKPPASPEEMDWSVHYPQLTDPQVRIVDMGCGFGGLTVALARMFPDKAVLGTEIRAKVCEFVRLRIQALRKEHPGEYQNGSALRTNSMMLMPNYFRRAQLEKMFFCFPDPHFKAKNHRRRIISGPLLTEYAHFLKPGGILYTITDVEELHKWHEAKADAHPCFQRLNKWEMEADPSVAVMVEVTEEGKKVARSGGKKFWAVYR 771
            L G+ PQK+FYR+RAHCNPLSHN  F+ P +P EMDWS HYP + +P V  +D+GCGFGGLT   A ++PDK  +  EIRAKV E+VRLRI+ALR EHPG++QN SALRTN+M  +P YFR+ Q+ KMFFCFPDP FK + HRRRI+  PLL EYA+ L PGGILYTITDVEELH+WH  K  +HPCF R+   E++ADP V  M E TEEGKKVAR GGKK+ AV+R
Sbjct:   17 LAGKAPQKKFYRSRAHCNPLSHNDCFEYPRTPSEMDWSTHYPGIENPNVDFLDIGCGFGGLT---AELYPDKLTMALEIRAKVTEYVRLRIEALRAEHPGQFQNVSALRTNAMRYLPQYFRKGQITKMFFCFPDPQFKTRLHRRRIVHTPLLAEYAYLLAPGGILYTITDVEELHQWHVEKCSSHPCFTRIPDSELDADPCVKAMTEETEEGKKVARGGGKKYVAVFR 241          
BLAST of mRNA_S-ischiensis_contig13.2883.1 vs. uniprot
Match: A0A8K1C687_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C687_PYTOL)

HSP 1 Score: 313 bits (802), Expect = 6.630e-105
Identity = 143/223 (64.13%), Postives = 174/223 (78.03%), Query Frame = 1
Query:  103 PQKRFYRARAHCNPLSHNSSFKPPASPEEMDWSVHYPQLTDPQVRIVDMGCGFGGLTVALARMFPDKAVLGTEIRAKVCEFVRLRIQALRKEHPGEYQNGSALRTNSMMLMPNYFRRAQLEKMFFCFPDPHFKAKNHRRRIISGPLLTEYAHFLKPGGILYTITDVEELHKWHEAKADAHPCFQRLNKWEMEADPSVAVMVEVTEEGKKVARSGGKKFWAVYR 771
            PQK+FYR+RAHCNPLSHN SF+ P +PE MDWSV+YP + +P V  +D+GCGFGGLTVAL  +FP+K  LG EIR KV E+VRLRI+ALR E PG++QN S  RTN+M  +P+YF++ QL K+FFCFPDPHFK +NHRRRI+   LL EYA+ L PGGILYTITDVE+LH WH  K  AHPCF R+   E+ +DP V  M E TEEGKKVAR GG K++AV+R
Sbjct:   15 PQKKFYRSRAHCNPLSHNDSFEYPLTPEVMDWSVYYPGIENPSVDFLDIGCGFGGLTVALGDLFPEKLTLGLEIRPKVTEYVRLRIEALRAEQPGKFQNTSVFRTNAMRYLPHYFKKGQLSKLFFCFPDPHFKLRNHRRRIVGTNLLAEYAYLLAPGGILYTITDVEDLHNWHVEKCTAHPCFVRIPDEELASDPCVKAMTEETEEGKKVARGGGNKYFAVFR 237          
BLAST of mRNA_S-ischiensis_contig13.2883.1 vs. uniprot
Match: A0A6G0WNF9_9STRA (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNF9_9STRA)

HSP 1 Score: 311 bits (797), Expect = 3.950e-104
Identity = 147/235 (62.55%), Postives = 182/235 (77.45%), Query Frame = 1
Query:   85 TLDGE---RPQKRFYRARAHCNPLSHNSSFKPPASPEEMDWSVHYPQLTDPQVRIVDMGCGFGGLTVALARMFPDKAVLGTEIRAKVCEFVRLRIQALRKEHPG--EYQNGSALRTNSMMLMPNYFRRAQLEKMFFCFPDPHFKAKNHRRRIISGPLLTEYAHFLKPGGILYTITDVEELHKWHEAKADAHPCFQRL-NKWEMEADPSVAVMVEVTEEGKKVARSGGKKFWAVYR 771
            T++GE    PQK+FYR+RAHCNPLSHN SF  P +P EMDWS  YP++ +P+V  +D+GCGFGGLT+ALA +FPD   L  EIR KV E+VRLRI+ALR EH    +YQN S LRTN+M  +P+YF + Q++KMFFCFPDP FK +NHRRRI++  LLTEYA+ +  GGILYTITDVE+LH WH  K D+HPCF+R+ ++ E+ ADP V  M E TEEGKKVARSGGKK+ AVYR
Sbjct:    4 TMEGEVVGMPQKKFYRSRAHCNPLSHNDSFDYPLNPREMDWSARYPKVDNPKVEFLDVGCGFGGLTIALANLFPDNLTLAMEIRPKVTEYVRLRIEALRNEHASSNQYQNVSVLRTNAMRYLPHYFEKGQIKKMFFCFPDPQFKQRNHRRRIVNTHLLTEYAYLIPEGGILYTITDVEDLHNWHVEKCDSHPCFERITDERELNADPCVTAMTEETEEGKKVARSGGKKYVAVYR 238          
BLAST of mRNA_S-ischiensis_contig13.2883.1 vs. uniprot
Match: A0A024TU48_9STRA (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TU48_9STRA)

HSP 1 Score: 311 bits (797), Expect = 6.150e-104
Identity = 145/226 (64.16%), Postives = 180/226 (79.65%), Query Frame = 1
Query:  103 PQKRFYRARAHCNPLSHNSSFKPPASPEEMDWSVHYPQLTDPQVRIVDMGCGFGGLTVALARMFPDKAVLGTEIRAKVCEFVRLRIQALRKEHPG--EYQNGSALRTNSMMLMPNYFRRAQLEKMFFCFPDPHFKAKNHRRRIISGPLLTEYAHFLKPGGILYTITDVEELHKWHEAKADAHPCFQRL-NKWEMEADPSVAVMVEVTEEGKKVARSGGKKFWAVYR 771
            PQK+FYR+RAHCNPLSHN  F+ P +P EMDWS HYP+L +P+V  +D+GCGFGGLT+ALA +FP+K  L  EIR KV E+VRLRI+ALR+EH    ++QN S LRTN+M  +P+YF + Q+EKMFFCFPDP FK +NHRRRI++  LLTEYA+F+  GGILYTITDVE+LH WH AK D+HPCF+R+ +   ++ADP V  M E TEEGKKVARSGG K+ AVYR
Sbjct:   25 PQKKFYRSRAHCNPLSHNDLFEYPLNPTEMDWSAHYPKLDNPKVNFLDIGCGFGGLTIALANLFPNKTTLAMEIRPKVTEYVRLRIEALRQEHASSNQFQNVSVLRTNAMRYLPHYFEKGQIEKMFFCFPDPQFKQRNHRRRIVNTHLLTEYAYFIPEGGILYTITDVEDLHNWHVAKCDSHPCFERITDDAVLKADPCVQAMTEETEEGKKVARSGGNKYVAVYR 250          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig13.2883.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQW1_ECTSI8.730e-12568.48tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Ect... [more]
A0A836CNR8_9STRA1.130e-10766.09tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Tri... [more]
K3WL42_GLOUD1.980e-10765.33tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Glo... [more]
H3G8D5_PHYRM5.670e-10765.92tRNA (guanine-N(7)-)-methyltransferase n=20 Tax=Ph... [more]
A0A7S2DPP9_9STRA1.620e-10664.07tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Dic... [more]
A0A0P1B7Y4_PLAHL4.470e-10665.47tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Pla... [more]
A0A3R7J5R5_9STRA1.320e-10564.04tRNA (guanine-N(7)-)-methyltransferase n=3 Tax=Phy... [more]
A0A8K1C687_PYTOL6.630e-10564.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0WNF9_9STRA3.950e-10462.55tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Aph... [more]
A0A024TU48_9STRA6.150e-10464.16tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Aph... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig13contigS-ischiensis_contig13:255720..267068 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score368.2
Seed ortholog evalue3.1e-99
Seed eggNOG ortholog2880.D8LQW1
Preferred nameTRM8
KEGG koko:K01669,ko:K03439,ko:K17887
GOsGO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0031974,GO:0031981,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1902494,GO:1990234
EggNOG free text desc.tRNA (guanine-N7-)-methyltransferase activity
EggNOG OGsCOG0220@1,KOG3115@2759
EC2.1.1.33,4.1.99.3
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016,ko03029,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptiontRNA (guanine-N-7) methyltransferase, Trmb type
Ec32 orthologEc-07_001780.1
Exons7
Model size774
Cds size774
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815681.3366284-CDS-S-ischiensis_contig13:255719..2558891622815681.3366284-CDS-S-ischiensis_contig13:255719..255889Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 255720..255889 +
1695739847.0650232-CDS-S-ischiensis_contig13:255719..2558891695739847.0650232-CDS-S-ischiensis_contig13:255719..255889Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 255720..255889 +
1622815681.3505616-CDS-S-ischiensis_contig13:257114..2571751622815681.3505616-CDS-S-ischiensis_contig13:257114..257175Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 257115..257175 +
1695739847.0794744-CDS-S-ischiensis_contig13:257114..2571751695739847.0794744-CDS-S-ischiensis_contig13:257114..257175Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 257115..257175 +
1622815681.3613276-CDS-S-ischiensis_contig13:259392..2596201622815681.3613276-CDS-S-ischiensis_contig13:259392..259620Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 259393..259620 +
1695739847.0913026-CDS-S-ischiensis_contig13:259392..2596201695739847.0913026-CDS-S-ischiensis_contig13:259392..259620Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 259393..259620 +
1622815681.3719823-CDS-S-ischiensis_contig13:260382..2604531622815681.3719823-CDS-S-ischiensis_contig13:260382..260453Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 260383..260453 +
1695739847.1010242-CDS-S-ischiensis_contig13:260382..2604531695739847.1010242-CDS-S-ischiensis_contig13:260382..260453Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 260383..260453 +
1622815681.381778-CDS-S-ischiensis_contig13:261484..2615491622815681.381778-CDS-S-ischiensis_contig13:261484..261549Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 261485..261549 +
1695739847.1111672-CDS-S-ischiensis_contig13:261484..2615491695739847.1111672-CDS-S-ischiensis_contig13:261484..261549Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 261485..261549 +
1622815681.3930125-CDS-S-ischiensis_contig13:265168..2652481622815681.3930125-CDS-S-ischiensis_contig13:265168..265248Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 265169..265248 +
1695739847.1230657-CDS-S-ischiensis_contig13:265168..2652481695739847.1230657-CDS-S-ischiensis_contig13:265168..265248Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 265169..265248 +
1622815681.407589-CDS-S-ischiensis_contig13:266969..2670681622815681.407589-CDS-S-ischiensis_contig13:266969..267068Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 266970..267068 +
1695739847.136831-CDS-S-ischiensis_contig13:266969..2670681695739847.136831-CDS-S-ischiensis_contig13:266969..267068Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 266970..267068 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig13.2883.1prot_S-ischiensis_contig13.2883.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig13 255720..267068 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig13.2883.1

>prot_S-ischiensis_contig13.2883.1 ID=prot_S-ischiensis_contig13.2883.1|Name=mRNA_S-ischiensis_contig13.2883.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=258bp
EAKGGGVGEGGTSQVAKRNRDDDGTGPITLDGERPQKRFYRARAHCNPLS
HNSSFKPPASPEEMDWSVHYPQLTDPQVRIVDMGCGFGGLTVALARMFPD
KAVLGTEIRAKVCEFVRLRIQALRKEHPGEYQNGSALRTNSMMLMPNYFR
RAQLEKMFFCFPDPHFKAKNHRRRIISGPLLTEYAHFLKPGGILYTITDV
EELHKWHEAKADAHPCFQRLNKWEMEADPSVAVMVEVTEEGKKVARSGGK
KFWAVYR*
back to top

mRNA from alignment at S-ischiensis_contig13:255720..267068+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig13.2883.1 ID=mRNA_S-ischiensis_contig13.2883.1|Name=mRNA_S-ischiensis_contig13.2883.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=11349bp|location=Sequence derived from alignment at S-ischiensis_contig13:255720..267068+ (Schizocladia ischiensis KU_0333)
GAGGCCAAGGGTGGCGGGGTCGGGGAAGGGGGCACGTCGCAGGTCGCGAA ACGCAACCGAGACGACGACGGTACGGGCCCCATCACCCTGGACGGGGAGC GCCCCCAGAAGAGGTTCTACCGGGCAAGGGCGCACTGCAACCCGCTGTCG CACAACTCCTCCTTCAAGCCGTGAGTCATAAAACCTGCGCCACCAGTTCT TGAACGAGTGCACATGGTGCTACCGGAGCGGCGGCTGTGTCATGTGGTGT GGTGGAGTTGATGTCAGCTACAGTACGTCGTACACCGCTGTACAACTGTA GTGCGGGACGGTAGACGTCCCACCAAGTCGTGTCAAAGAAAACCTGGCTG TGTTGCTGATACCATATCCGGGTGGAACACCCGGTGGGACTCCCGCCGGG AAGCAGTGATGGAATATCTAAGCACATCAACCTAGTCATGAACAGTACTC GCCTATTTTGAGTGGTAGATGTATCTATCGATAGTCGATATTCGATAGTT TGAACCACACTGAATCCAAGTAATTAGTAACGCCCCCCCGCGAAATCAGT TGAGCCCGATAGCTATCTACTGATCGATATTCCATCACTGCCGGGAAGCA GCGATGGCACATGCGCCGCCGCCACAGAGCCGCACTCAACCTCGCCCTGC CCTTAGGTGTCCTATTTGCCTGTTGATTCATGAAGGATATACGCTGCGGG TGGCCGGGGGGGGGAATACTCATGAGCGTCTTGTCGTAGCCTTTTCACCA TTGATCATGCTTGCTACAGGGGGTGAGGAGGGGGGTACAAAGAACGGTGC TTTAGGTCTTCTTTGCCTGGCTCGAGGCATGGGACGGTATTTGGCACTTG TACGGAGTCACCACACCCGGACTTCCTTGCCAGCGTACACGTTCAGGTGG TGCTGGGCCTTTATGCATACACATTTATACTCATTATCCGTGTGTTTGAA GTGTGCATTCTAGGCATGGCCAGAAACCCGAAGTTGGTCCAGGCTACCCC GCCGCCAGCCATTTACCAACAGGAATCAAACACGACGTAGCCCGGCCGCG TTCATGCTGCCATAGCACCACCTCATGCACTGTGCCTCAGCCCCTCCTCC TTTTCCTCCTCCTCCTCCCCCTCCCCCTCCCCCCCCCCCCCCCTCCCCCC CCCCCTCCCCCCCCCCCCCCCTCCCCCCCCCCCCCCTCCCCCCCCCTCCC CCCCCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCC CCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACCACCACCACCACCA CCACCACCTCCACCACCTCCTCCATCCCCCCCCCCCCCCCCCCCCCCCCC TCCTTGCTCCTGCTGCCGCCGCCCCTCTCTGATCCCGGGGATCAGCCCGG CAAGCCCCGAAGAAATGGACTGGTCAGTGCACTACCCCCAGCTCACCGAT CCTCAGGTGCGCTAATATATGAACGTTCAATTCTTAAATGAAACAACTAC TACAGTAGCACGAGAACAGTCAATCCCACACACGTGCGATTGCACCTCGT TGCAATTTATATGAATCACCTCAGGTGGGCCGTTGCGGTCCGGATGACTG ACTGGGGGTGGCGTTGGGGCTAGTGTCGGGTCTATTTAACCCTTTTACGA GAAGGAGCAAAGACGAGGATCGTTCGGGTCCAGGGCATGCACAGAGACGC CGAACGTGAGCACGCACACCCCTGGTAGATTGGACTTCCACACTACAACC CTACGGTATGATTATACGGACCCCAGGGGTAACAGGGTTAGGCTGGCCGG CCCTAACTTGTCATGCGGACTGGCGAAGGGAATGTTCTTTGGTTTCAGGG CGCGTGGTGGTTGGCAATTTCCAAGCGGGTCCTCCGCTCGCTGACCGAGG GTTTTGTTGGCTTTCCAGAGTGTTTTCCTAGTCCAATGTGTCATGCAGAG CGAAGGGAATGTTCTTTGGTTTCAGGGTGCGTGGTGGTTGCTAATTTCGA GGGGGTCCTCTGCTCGCTGAAAGGGGGTTGTGCTAGCTTTCCGGAGTAGT TTCCTAGTCTAATGTGTCATGCGGACTGGCGAAGGGAATGTTCTTTGGTT GCAGGGCACGTGATGGTTGCCATTTCCAAGGGGGTCCTCCGCTCGCCGAC AGAGGGTTTTGTCAAATAGCTTTCCGGAGTGTTTTCCCACAGGCAAAACA GGGCGAGAGCCCGAGCGTTCTCTCGCGGCGTGGGGCGGCTTTTTCTTGGT GCGGTTTGCTGTTCTGCTGCACTGTGGTCAATGGTCTCGGGACTACGGCA ATCACAACGTGAGCTACATACTTCGAAGTATATTCTGTACTTGTGCTAGC ACTTCGAAGTACTTTTGCTAGTGCTTGGGAGGCGTACGTCTCGGGACTAC GGCAAGCAGAACGTGAGTTAGTTACATACTTCGAAGCATATACTGTACTT GTGCTAGTACTTCGAAGTACTTTTGCTAGTGCTTGGGAGGCGTACGTCTC GTGACTACGGCAAGCACAAGGTCAGTAGGTTACATACTTCGAAGTATGTA CTGTACTTAGGGCTGTCGGCATTGCACGCACGGTTATGTCGCAAGACAAA CCAATGAGTACATACCTGTGCTAGTACTTCGAAGTACTTTTGCTAGTGCT TGGGAGGCGTACGTGCTCGGAAGGGCCACTGCAGGCAGGGGTGTACTTGA AGCACAAGTACCCTGGGAGTGCTTGCCGCAGTGCCGACAAGGGTATGTAG ACCACTTTTTGTTTATCCCTTTTACCCCTGGGAAATTGGACTCCAATTCT AAAACCCTATGATCATACGGACCCCAGGGGTAAAAGTTTTCAGAGATTGC GTTCTTGCTCCCCTAACCCCCCCGCCCCCCCTCTTTCTGCCTGCGCGCTC TTGTGCGCATGTGTGTGTGGATGCGTGTGTGCGTGTGCGTGCGTGTGCGT GTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCATGTGTGCCTCCGC TGGCCAGACCGTGCCGTGCCATACGAGCTCGCAGCTAGACGTGGGGTGCA GGTTCGGGGGCCGCCTGACTGTGGAACTATGTTAGCCCGCATGCTCGTAC AACCTATGTGGAGTGTGCCCTCGCCTCCACTAGTCTCATTCACTATATAT CAGCGTGCCCTCGCCTCCACTAGTCTCATTCTCTCTCCCTGTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCCCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCTCTCT CTCCCTCTCTCCCTCCCCCCCTCTCTCTGCCCCCTCCATCCGCCCCCCCC ACCCCACTATGTTGGCGCGCATGCTCGTACAACCTACTTCGAAGTATATG AGTGTGACCTCGCCTCCACTACAGTAGGTGGTACTAGCTAGTTCCTTTGG CCTTTAAGAGAAATAATTGAGTATGCTCTTTCCTGACGTTTTGTTCAACT CAATGAAAAATTGACCGCTTCATCTGAAGGTATCACGGCAAAACCTTGTA CCTCAGCCTTCATAACAAGTCCCAAGTTGAAGGTCAGCACGTTGAAGTTG AAGGTTTTTCAGAACTTACCGGTGGCCCCGACTGTAGTAGTCTCTCATTC TCTCTTCCCCCCCCCCCCTGCAGGTCCGCATTGTAGACATGGGGTGCGGG TTCGGGGGCCTGACGGTGGCCCTCGCCCGCATGTTCCCGGACAAGGCGGT CCTCGGGACGGAGATACGCGCCAAGGTGTGCGAGTTCGTCCGGCTGAGGA TACAGGCGCTGCGGAAGGAGCACCCGGGGGAGTACCAAAACGGCTCCGCG CTCCGCACCAACTCCATGATGCTCATGCCCAACTACTTCAGGCGTGCGCA GGTAGGGGTGGAAACTTTTGTTTTTGTTGTGTGCAGGCGGATGTGAGGAT GTACGCTGTCGGAGGTGGTGGCTGTGGTGGTGACGCGGACCGCGGCCATA GTGTTGTTGTTGTTGTTGTTGCTTCGCTGTCGCTGTGTGGTAGTTGATGG TCATGATGTTGTTGTTGTTGTTGTTCGTGTTGGTGGTGGTGTTGTTGTCG GCGTTGTTGTTTTTGTTTTTGCTGTTGTTGCTGCTTGCTGTACCTTTGTA GTAGGTAGTTGTTGTTGGTGTTGTGGTTGTTGTTGTTGTTGTTGTTGCTT GCTGTAGCTGTGTATATGTAGTAGTTGTTGGTGTTGTTGGTGTTGTTGTT GTTGTTCTTGTTCTTGTTTTGCTGCTGCTGCTGATGTCGGTGTTTAGTGC TGCTGGTGTTGTTGTTTTCACTATTGTTGCTGCTGCTGCTGCTGCTGTTG TTGTTGTTGTTATTGTTGCTGTTGTTGGTGTTGTTGGTGTTTGGTGCTGT TGTTGTTGTTGTTGGCGGTGGTGTTTGTTGTTGTTATGGTTGGTTTGTTG TGGTGACTGCCGCCATTGCTGCTGTTGCAGCAGCTGCTGCTGCTGCTACT GCTGCTGCTGCAGGTGTTGTGGTAGCCGTGTTCTCTAGTACTTGAACGGG GGGAGCAGGTAGGTTTCGGTCTGACGCCAAAAATCGGGTCTTGAACTGGA TGCTGTGCTGCTGTAACCCCAATACATGTGCGTGTACGTGTATTGTTCGC CCCCCCCCCTCAGCTGGAGAAGATGTTCTTCTGTTTCCCGGACCCGCATT TCAAGGCCAAGAACCACCGGCGCCGCATCATCAGGTGAAATGAGAGAGCA AGGTCGACGTTTCGTTATACATATCCTCGTTAAATACGATACTCCATGCA ATGCATGCCTTCTACTACTGTTGTTAGTCCCGCCCGATAAACGCATCGTT GATACGTGGCTCAAACCTATTTTGTGGGGAGAGAAGCAGTTCAGAAGCGA ACGGGAAATAGGCAAAAGGTGTCCCTACTTTTTGTGAGTTCCGGGCCCCA GCCCGGAAGCCCCCCGTTCACCCGTCTTCTCAATCGCAGGGCAAGTAGCA GAAACAACAGCATACGATGCGATATAATGTGATGTGATGTGATGTGTGCT CTAATTCACTATCGTTCCGCATCAGATAGCGTCACATCACATCGTACTTC CGCCGGAAGTAGAAGCCTTTCCTTCACCCGCCTTCTTCTCACTCGCAGGG CAAAAGAAAGAGAGAAGAAAACCCAGCCTATCTGTTTCTTTCGCTGCGTC CTTGACGTGTCATCACAGCTTTGACTCGGCCCTTCCTCACTCGCAGGGCA AATAAAAAGGCATGAAAACCCAGCCTATCTGTTTCTTTTTGCTGCATGCC TTGATGTGTCGTCCCAGCTTTGACCCGCCCCTTCCTCACTGACAGGGCAA AAAAAGGGAAGAAAACCCAGCCTATCTGTTTCTTTACACGCTTCCTTGAT GTGTCGTCCAGCTTTGACTCGCCCCTTCCTCGTGGGCATGCTGTTTGCCT CACCTTCATTCTGCCCGCCCTCTTTCCTGCCCATGCCAACAACAACGACC ACGGCGCCGGCACTAACGTCTTTGCCAAACCGTCGCCACCACCACCAACG CCGCCGCCACCGCCACCACGCCCGCCGTTGCCACCACCACCACCACCAAC ACCACCACCGCCACCACCACCACCCCCACCACCACCACCACCGCCACAAC CACCACCACCGCCACCACCGCCACTACCACCAACACCACCACCACCGCCA CCACCACCACCGCCGCCGCCACCACCACCGCCGCCGCCGCCGTCACCGAT ACGACACGGCATCAGTGGGCCCTTGCTGACAGAGTACGCCCACTTCCTCA AGCCGGGGGGGATTCTCTACACAATCACCGGTAAGTAGGTTTCTTGCACA GTTTTGTATGAATACAAATTTCTGTTTGTTTCTTTCTTCTTGCACTGCGA GGGAAGGAAGGGCTCTTGCTGAGTCCTGTCTTGGGATGAGCCTTTTGGCG CGGGGCCTGGAACTCGCTGCTTGTCTCTACCACTGAAATGCATTTCACAA TTGCACAATCACCGGTGGCTTCGTTGACAACGGACACTCGAGGGACCGGG CCCCGTCCCAAGAATGGCCATAGCAGCGCACGCCTTATGCTCTTGTTCAA CTTCCAGGTCGTTAATACGTACTTCGAAGTACATATGTAAATTACTGTAG GGGGCCGGATTCATCGTTGGCTGCGGGCCGCAGGTTTAATGCTTCACCTC TGGAGCCCGTAATCACAGGAGTTTAGTGTGTAGGTCCGATTTTTTTGGCA CTGCAGTTGGCCGAGAAGCGGGCACGCCAACAACAACGGCCAGAGAAGAG AACAAAGGGCGGCGAGGAGGAAGAGGCAGTCTCTTGTGCCTTGCGGCGTT TTTTTCTTTCTTTTCCTTTTTTTTTTCCTGGCTCGGCATGTCCGTCTGTT TGTGCAGGGAATCACACATGTTGGGACAAGCATACATGTGGGGACTTGCA GCGAAGCACACGCCCGTGCACAAAAGCCACCTGAGATACAGACATAGAAC TGTTACTTTTTTTACATTTTGGCTGTGTTTGAAGGTTAAAAGAAGGGCTT CTGGTGAGGGCCCCACCTTGGGTTGGTGGGACGGGGCCAGGAACTCGCAT GCCATCCATATATATATATATATATGTGTGTGTGTGTGTGTGTACTCACG TGGTGCTTGCCGTAGTCCCGAGATCATTGACTACGCGCCTCGGCCGAGAC GGAGCTGGATAGTTTTTTAAAAAGTTCATCTGAGATTCATAAAATCATAC GAAGATGCACATGTGTTGATCCCGCGCCAGCACCAGTAGGGGACGTGCAC CGTAACCCGCCCCTGGATGGAGGTGCGTTGGCTGCTGCCCCCCCCCCCTC TCCCCCACGGTTGGCACTTCACCCCTATGTTAAGTGGTGCCCTTCAAGCT CTTAACTAGAGGCAATTACGTAGGGGTAATTGACAGACGTGAGGGTTTCG TGTCGCCACGACACACCCTCGGCGCAGCATGCGCCTCGCGGCAGCAAGTG GTTTTCTGGAGAGTGATCATTATCGTTACGGCTGCATGCACCTTGGACGG CGTGTGCCTTTTCTAGAGTCTTAAACCGCGGCTACAAAACGCCTCCGCAT ATCTACCAAAACTTGCCGTAACTGCTCCGAAGTACTCGAGTCTATCCCAA ACAAACGGTACCATGCACGGCACTGTAACACACTGTGCTCCTCTCCTATG AGCCTATCATCGACGTACTGTAATGTCGAGTCGCTCAGCCACCACGCTTG ACACGCCCCCTCGACGAGATATCTACTGTAGTCGATTCTGCTACTTCTCC CAGGCGTAACACACCCCAATGTCACGCGTGAGCTCCCCCTCGATAGACTA CTGTTCAGAGGCGCGTGCCCAAAGACGTCCGCTTCGCCCGCGGCGCCTGC CTGACCGCGCAGCCATCCCAAGTGTCATGCTCCTCCTCCTTCTCGTGCAA GTACGCAAAAGGCTTGCCGGACTTGGCAGACTTGGCCGCGGACACCAGCT TAAGCAAGTCCTTGAGTGTCACATCGTCCGCGGGCGCTTTGCTAGCACGG TTACCGTCCTGCGTCTCTTGCTGCGTACCGGACTGGCACTGCAAGGCTTT ATGTCCCGACTTCCCGCACAAGTAGCAGACTCCCGGAAACGATTTAGTGC CTTGCCTAGCATAGCCGGCTTGCTGAGTACGGCAGGTTTCGTCCGTGTGG GATGAGGTCTTGTGTAGTGAGCATCTCTGTACGCTTGCTGTCAAGACGTG CTCATCAGACCCCATCTTACGCACACTTCTATCGCCGGTCCGACCGTGGT GAGTGACGATTGTCTCCTTGGCTCGCTGGTAGTTCACCTCCTTACTCGAC TCGATGAACACGTGGACGCTCTCGAAGTTCTCCTCCGGCAATGCCAAAAG AAGAATGCCCTGCAATATCTCATCGGAAACAGGCAAGCCCATGTCACCAA GCTGCCCGTGCATGCTCTCCATTTCTGCTATCTCTGACTCCAACTCCTCC TTAGCCGCAAACTTACTAGAAAGCAGCTGTAGCAGCAGTCCGACCTTGCG GTTGGATGCATTCCCCTCATGGTGCTCAGATAACTTGGTCCAAGCCGCTA GACCATCCCCGTACCCAGCCAGTGCAATGACACCCAAACTTACGTCATCT AACGCCAGTACCAGCCCGTCGTAGACTAGACGGTTGCTAGCTCGCGACTC CTCTGCAGCCTCGGTCGTGTCGCGTGCCCGAGGTCTCTCGTCCTCGCCGC CGTCCAGGATGTATCCCACACCCCGCTTGTTCAGGACCGCCTTGAAACGT GTCTTCCACCGCCTGTAGTCGTAGTCGCCCTTCTTCCTGGAGTAGACGAT GGTCTGAACATTGCTAAACACCTTCGTCTGCGTGGAGCTCATGATGCTCC CTGCTCCTGGTGTCACGCCGTGATGGTCGCGTCCACCCTTGCCGTGTCGG TGTGCCTTGGATACGCCCCGGAGGACGCCCTATCCGTACCGGCCCTCGTA CCTGTGTCACCGTGCCTTGGATACGCCCCGGAGGACGCCTGAACCGTACC GGCCCTACAGCGTAGCGGGGCGGCGTGATGACCGCCCTGCGTCTCCCTTG GGGGTTCCCCGGCGTAATAGCCCGGCGTGATAGCCGCCCCCTTGCCCGTG GCACTCTTGCCCGCGGCTTCGTGCACGGATCTCTCGTCCGTGGCTTTTGC ACGGGCACCTCACCCGTGGCTTCGTGACGACCTGCTCGAGGCCGGAAACT GACTGTCGACCGTTCCCGCCGGACTTCCCCAACCACTACGTCACAGGGCT CATACCCTGACAGATGTGAGGGTGTCGCGTCGCCACGACCCACCCTCGGC GCAGCATGCGCCTCGCAGCAGCGAGTGGTTTTCTGGAGAGTGATCATTAT CGTTACAGCTGCATGCACCTTGGACGGCGTGTGCCTTTTCTAGAAGCTCA AACTGCGGCTACAAGACGCCTCCGCATATCTACCAAAACTTGCCGTAACT GCTCCGAAGTACTCGAGTCTATCCCAAACAAATGATACCATGCACTGCAC TGTAACACTGTGCTCCTCTCCCTTGAGCCTATAATCGACCTACTGTAATG TCGAGTCGCTCAGCCACAAAGCTTGACAGTACTTAGACCTAAAACGAATG CGAATTTGGCCCTAATTAACCTCTAAGTGCCACTTAACCCCCAAGTGGTG CCCTTTTAGGCCCTTAATTGGAGGCAATGAGGGGCAATTTGACCTAAAAT GAAGGCCAACTAGGCCCTAACTAACCTCTTAAGTGCCAACCCTGCCGCCG ACGCCCTCCCAAGATGTGGAGGAGCTGCACAAGTGGCACGATCAGAGGCA ATTAGGGGTAATTTGACCTAAAACGAAGGCTAATTAGGCCCTAGTTAGCC TCAAAGTGCCAACCCTGCTCTCCCCCGCCCCCAACGAACGCCTCCCAAGA TGTGGAGGAGCTGCACAAGTGGCACGAGGCGAAGGCGGACGCGCACCCCT GTTTCCAGAGGCTCAACAAGTGGGAGATGGTGAGCGGTGGTGGAATATAT ATGTAAGCAAATCAACCTATTCATCTTATCGCAGTACTGACCTGTACTTC GAAGTATATCTATTGATAGTTGATATTCGATAGTTTAAACCACATTAAAT CCAAGTAGTTGTGGCACAAGCAGAAGGCGGACGCGCACCCGTGTTTCCAG AGGCTCTCCGAGTGGGAGACGGTGAGCAGTGATGGAATATATCAGTAAGC AAATCAACTTATTTATTGACAGTACTGATCTATTTGGGGTGGTAGACAAG CGGAGAGTGCCAGGCCCCGTGCCGAAAGGGACGACTGATCTATACATCTA TTGATAGTTGACATTGGATAGCTAGAGTGCCGACGCACGCCCCTGTTTCC AGAGGCTCTCCGAGTGGGAGACGGTGAGCAGTGATGGAATATATAAGCAA GCAAATCAACCTATTGATCGGCAGTACTGATCTGTATATCTATCGATACT CGGTGTTCGATAGTTTGACCCACACTACATCCACGTAGTTTGTAACGACG CGCACAAAACCAGTCGAGCCCGATAGCTACTGTATCTACTGATCATCGAT ATTCCATCACTGACGGTGAGAGCCCAGTTGCCGCGCTTGTTGTCTTGTGT TGATACTCGAGTAAGAGGATTCTTTGCTGTGTGTTGTTACTTCAATGGAC AAGGTATTGTAGAACGTGTACGAGTACTCGAGAACTCCCCCTTCGCGCCT CTGGCAAGGGCAGGGTGGGAGGGGGGAGGGCACCCCCCTGCCATGGGCAT GGGCAGGGGGTTGACCAGTACAGTACAGTACGAGTACGGGTACGTACTGG TACTTCTTCGGCGGATACTGTAGCTCGATAGCCAAACCGATACATTTAGC AATGAGAACGTGCCCCGAGAAACTCGATTCTTAAATGGGATAGCCATTAG TCCGAGAATTCTCAATCTCGCACACGTGCGATTGTACCTCATTACCATTT TACATGAATCACATACTTCTTCGCTGGATAACGCAATAGCCAAACTGGTA TACTTAGCCATGAGATCGTGCCCCGTCCACTACAACTGCCGTCGCCACCG CCGCAGCCGCCACCAACACCCACCACCGTTGCCACGCCGCCTGCCGCCAA AAACAAAAAAGTTTTTTCCTTTCTTTCTTTCTTTTCTTTTTAAAACAACA ACCCCCCTGCTGCTCATGTGTTGTACCAGGAAGCAGACCCGTCTGTGGCG GTGATAATGGTGGACGTGACTGCCGCTAAGAAAGATTTTTTTTTTTTTTT TTTTTTAAACAACCCCGCTGCTCCTCATGGGTTGCACCAGGAAGCTGACC CGTCCGTGGCGGTAGTGGTGGAGGTGACAAACGAACAAGTTTTATTTGTT GTACTTTATTATTATGTTTTTCAACAACCCCGCTGCGGCTCATGTGTACC TACCAGAAAGCAGACCCGTCTGTGGCGGTCATGGTGTTCGTTATTGAATT TTTATTGTTTTTACCTTTGTTTTTTTGTTTGTTTGCTTCGTATATTTTAA CAACCCCGCTGCTGCTCATGTGTACTCGTATGCTACTATGCTACCAGGAA GCAGACCCGTCTGTGGCGGTGATGGTGGAGGTGACTGCCACCAAGAACAA ACAAGTTTTTTATTTTCTATTTTTTACGTCGTATTGTTTTGTATCATACC AACATATATTTTTACCAACCCAGCTGATGCTTATGTGTGTGATTTACCAG GAAGCGGACCCGTCTGTGGCGGTGATGGTGGAGGTGACGGAGGAGGGCAA GAAGGTGGCCCGTTCGGGGGGGAAGAAGTTCTGGGCTGTTTATAGGTGA
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig13:255720..267068+

>mRNA_S-ischiensis_contig13.2883.1 ID=mRNA_S-ischiensis_contig13.2883.1|Name=mRNA_S-ischiensis_contig13.2883.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1548bp|location=Sequence derived from alignment at S-ischiensis_contig13:255720..267068+ (Schizocladia ischiensis KU_0333)
GAGGCCAAGGGTGGCGGGGTCGGGGAAGGGGGCACGTCGCAGGTCGCGAA
ACGCAACCGAGACGACGACGGTACGGGCCCCATCACCCTGGACGGGGAGC
GCCCCCAGAAGAGGTTCTACCGGGCAAGGGCGCACTGCAACCCGCTGTCG
CACAACTCCTCCTTCAAGCCGAGGCCAAGGGTGGCGGGGTCGGGGAAGGG
GGCACGTCGCAGGTCGCGAAACGCAACCGAGACGACGACGGTACGGGCCC
CATCACCCTGGACGGGGAGCGCCCCCAGAAGAGGTTCTACCGGGCAAGGG
CGCACTGCAACCCGCTGTCGCACAACTCCTCCTTCAAGCCCCCGGCAAGC
CCCGAAGAAATGGACTGGTCAGTGCACTACCCCCAGCTCACCGATCCTCA
GCCCGGCAAGCCCCGAAGAAATGGACTGGTCAGTGCACTACCCCCAGCTC
ACCGATCCTCAGGTCCGCATTGTAGACATGGGGTGCGGGTTCGGGGGCCT
GACGGTGGCCCTCGCCCGCATGTTCCCGGACAAGGCGGTCCTCGGGACGG
AGATACGCGCCAAGGTGTGCGAGTTCGTCCGGCTGAGGATACAGGCGCTG
CGGAAGGAGCACCCGGGGGAGTACCAAAACGGCTCCGCGCTCCGCACCAA
CTCCATGATGCTCATGCCCAACTACTTCAGGCGTGCGCAGGTCCGCATTG
TAGACATGGGGTGCGGGTTCGGGGGCCTGACGGTGGCCCTCGCCCGCATG
TTCCCGGACAAGGCGGTCCTCGGGACGGAGATACGCGCCAAGGTGTGCGA
GTTCGTCCGGCTGAGGATACAGGCGCTGCGGAAGGAGCACCCGGGGGAGT
ACCAAAACGGCTCCGCGCTCCGCACCAACTCCATGATGCTCATGCCCAAC
TACTTCAGGCGTGCGCAGCTGGAGAAGATGTTCTTCTGTTTCCCGGACCC
GCATTTCAAGGCCAAGAACCACCGGCGCCGCATCATCAGCTGGAGAAGAT
GTTCTTCTGTTTCCCGGACCCGCATTTCAAGGCCAAGAACCACCGGCGCC
GCATCATCAGTGGGCCCTTGCTGACAGAGTACGCCCACTTCCTCAAGCCG
GGGGGGATTCTCTACACAATCACCGTGGGCCCTTGCTGACAGAGTACGCC
CACTTCCTCAAGCCGGGGGGGATTCTCTACACAATCACCGATGTGGAGGA
GCTGCACAAGTGGCACGAGGCGAAGGCGGACGCGCACCCCTGTTTCCAGA
GGCTCAACAAGTGGGAGATGATGTGGAGGAGCTGCACAAGTGGCACGAGG
CGAAGGCGGACGCGCACCCCTGTTTCCAGAGGCTCAACAAGTGGGAGATG
GAAGCGGACCCGTCTGTGGCGGTGATGGTGGAGGTGACGGAGGAGGGCAA
GAAGGTGGCCCGTTCGGGGGGGAAGAAGTTCTGGGCTGTTTATAGGTGAG
AAGCGGACCCGTCTGTGGCGGTGATGGTGGAGGTGACGGAGGAGGGCAAG
AAGGTGGCCCGTTCGGGGGGGAAGAAGTTCTGGGCTGTTTATAGGTGA
back to top