mRNA_S-ischiensis_contig13.2869.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig13.2869.1
Unique NamemRNA_S-ischiensis_contig13.2869.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig13.2869.1 vs. uniprot
Match: D7G1F5_ECTSI (Amino acid/polyamine transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F5_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 7.980e-61
Identity = 167/453 (36.87%), Postives = 207/453 (45.70%), Query Frame = 2 
Query:  722 DLGGGPAPDVSISVGGGN---GSCFEGAFAAGSPREVLQVLSIFVFGFTCHQNIFTICNELHHPTPARVSGVIVCTMSIVLTVYLGLVWGAYATFGSGVAGDLLQSYPQSGLLTAARLCMSMLVAFCYPLQAHPSRKCLLSVWKACGSGDGGIHGGSAVWDGGGGVANGYGDNH----RRHQR-----EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAATSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDVKAEVVART-------------------------EGLRHSLVTLAFLSLSYVIAMTVTDLGVLLEIVGATGSTAISYVLPGLLYLGMYPPPDPKRTLAGLQLMCGLCIAPVALTFIFMGEGA 1969
            D+ G  +       GGG+   GSCFEG+   GS + +LQ L IFVF FTCHQNIFTICNE+  PTPARV  VI C+M++ + +Y+ + WGAYATFG GV GDLL++YP++GLLTAAR+C+SMLV  CYPLQAHPSR C+LS WKA        +   A  DG G   +   D+     RRH+      E                                                                                                       +    XXXXXXX                          D+++    RT                         EGLRH +VT AFL+LSY IAM V DLGV+LE+VGATGST +++VLPGLLYL ++P P PKR+LA LQL  GL I PVALTFI +G  A
Sbjct:  284 DIAGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMAVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTAARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMQEAYSSLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADGSTAASPNSLGSRDGGASPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGVGGDGHNTRFESQEGGEDARRGTAEVETRFLGVEDREQRGELLSEGAAXXXXXXXDEEAGVGRGGGEHVGWRQHHLQGDAADIESAGRGRTFPRTVCSAGQAAVEGEGETAFWTSPEGLRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHSA 736
[Close]
BLAST of mRNA_S-ischiensis_contig13.2869.1 vs. uniprot
Match: A0A835YKE8_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE8_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.780e-34
Identity = 99/215 (46.05%), Postives = 120/215 (55.81%), Query Frame = 1 
Query:    1 SSFFACVATLTNTLLGVSIVGLPGGFAQAGYMVGTGLVILFACLSALGLHLLAEASRAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSVTPAPQVSFRSVALLAAPRWALLIDVAVAIKCFGVATSYLVVIGDLMPAVVDDTVGGMDPESFA---LDRRVWVTAGFCVVAPLAFARTLGALRYTATLSICFVIFITGMVLAYAVVPSL 636
            S  FAC A L NTLLGVSIVG   GF +AGY +GT L ++FA  SA+GL+LLA ++R                                      V   P  S+  VA  A P++ L ID AVAIKCFGVATSYL+VIGDL+P    D V G+  E  A   L R  W+T     +APLA  R+LGAL+YTATL+I F  F+  MV+AYA VPSL
Sbjct:   16 SGMFACAAALINTLLGVSIVGSAHGFTEAGYALGTALFVIFAGFSAMGLYLLACSAR-------------------------------------KVGAFPS-SYYVVAHAAVPQYTLAIDAAVAIKCFGVATSYLIVIGDLLP----DAVEGLLKERAAPALLSRHFWITTAMVWIAPLAAQRSLGALKYTATLAIGFAFFLVSMVVAYAAVPSL 188
[Close]
BLAST of mRNA_S-ischiensis_contig13.2869.1 vs. uniprot
Match: F0XYI5_AURAN (Uncharacterized protein AOT5 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYI5_AURAN)

HSP 1 Score: 132 bits (331), Expect = 1.870e-29
Identity = 84/206 (40.78%), Postives = 117/206 (56.80%), Query Frame = 1 
Query:    1 SSFFACVATLTNTLLGVSIVGLPGGFAQAGYMVGTGLVILFACLSALGLHLLAEASRAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSVTPAPQVSFRSVALLAAPRWALLIDVAVAIKCFGVATSYLVVIGDLMPAVVDDTVGGMDPESFALDRRVWVTAGFCVVAPLAFARTLGALRYTATLSICFVIFITGMVLAY 618
            +SF +CV  LTNT++G  ++GLP  F+ AG ++G   ++LFA  SA GLHLLA A+R  +                                 G   P+   SFRSVA  AAPR+A+LID AVA+KCFGVATSYL+V+GD MP V+   +GG     FA +R  W+     +VAPL +   L  L++ + LS+ FV+F+T M++ Y
Sbjct:   29 ASFLSCVFNLTNTIVGSGMLGLPAAFSNAGSLLGCAFLVLFASTSAFGLHLLAAAARIVSAKA------------------------------GGDAPS---SFRSVATAAAPRFAVLIDGAVAVKCFGVATSYLIVVGDTMPVVMAK-LGG-----FAANRSPWIVGAALLVAPLCYMPRLDGLKFASALSLGFVMFLTVMIVEY 195
[Close]
BLAST of mRNA_S-ischiensis_contig13.2869.1 vs. uniprot
Match: A0A7S2WEX7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEX7_9STRA)

HSP 1 Score: 129 bits (324), Expect = 9.110e-29
Identity = 84/217 (38.71%), Postives = 112/217 (51.61%), Query Frame = 1 
Query:    1 SSFFACVATLTNTLLGVSIVGLPGGFAQAGYMVGTGLVILFACLSALGLHLLAEASRAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSVTPAPQVSFRSVALLAAP--RWALLIDVAVAIKCFGVATSYLVVIGDLMPAVVDDTVGGMDPESFALDRRVWVTAGFCVVAPLAFARTLGALRYTATLSICFVIFITGMVLAYAVVPSLDAC 645
            SS  + V  L NT+LG  ++ +P   A  GY++GT  + LF   SA GLHLLA  +                                            + SFR V  +A P  +W+++ID  VA KCFGVATSYL+VIGD++P V+            +  R +W+  G  V+APL F RTL  LR+T+ LS+ FV FIT M+LA+AVVPSLDAC
Sbjct:    6 SSEASSVTNLANTILGAGMLAIPFAVASCGYVLGTICLFLFGAASAFGLHLLATCALKL---------------------------------------GRESSFRGVTQIALPGEKWSMMIDGVVAFKCFGVATSYLIVIGDVVPEVL---------YGLSSSRHLWIFIGALVIAPLCFLRTLDKLRFTSALSLVFVAFITSMILAFAVVPSLDAC 174
[Close]
BLAST of mRNA_S-ischiensis_contig13.2869.1 vs. uniprot
Match: A0A7S1TS32_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS32_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.530e-28
Identity = 86/242 (35.54%), Postives = 122/242 (50.41%), Query Frame = 1 
Query:    1 SSFFACVATLTNTLLGVSIVGLPGGFAQAGYMVGTGLVILFACLSALGLHLLAEASRAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----QGSVTPA---------------------PQVS-FRSVALLAAPRWALLIDVAVAIKCFGVATSYLVVIGDLMPAVVDDTVGGMDPESFALDRRVWVTAGFCVVAPLAFARTLGALRYTATLSICFVIFITGMVLAYAVVPSLDAC 645
            +S  +CVATL NT+LG  I+ L   F+  G +VG  L+  FAC +A  LHLLAE++R  T                                      G+ +P                      PQ S F  VA  A PR++ L+D AVA+KCFGVA SYL+V+GD+MP  +   +G   P  F L R+ W+ AG+ +V P+AFA+TL AL++T++ ++  V+ +  M + YAV P LD C
Sbjct:   47 ASILSCVATLANTILGTGILELSHAFSATGLVVGVVLLCFFACCAAFTLHLLAESARTVTGVDPNTGARLDSSFSLDHTAAFVPPGSTRSQDLLYRSSGASSPVYSDQDRLTLADPSQPLPDELKPQKSSFYLVADAAVPRFSFLVDTAVAVKCFGVAVSYLIVVGDMMPDAMKFILGDDGPP-FWLSRQTWIVAGWLLVVPMAFAKTLDALKFTSSFAVAVVMGVVAMTILYAVDPDLDGC 287
[Close]
BLAST of mRNA_S-ischiensis_contig13.2869.1 vs. uniprot
Match: A0A7S2BAD5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BAD5_9STRA)

HSP 1 Score: 123 bits (308), Expect = 7.020e-28
Identity = 104/404 (25.74%), Postives = 141/404 (34.90%), Query Frame = 2 
Query:  743 PDVSISVGGGNGSCFEGAFAAGSPREVLQVLSIFVFGFTCHQNIFTICNELHHPTPARVSGVIVCTMSIVLTVYLGLVWGAYATFGSGVAGDLLQSYPQSGLLTAARLCMSMLVAFCYPLQAHPSRKCLLSVWKACGSGDGGIHGGSAVWDGGGGVANGYGDNHRRHQREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAATSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDVKAEVVARTEGLRHSLVTLAFLSLSYVIAMTVTDLGVLLEIVGATGSTAISYVLPGLLYLGMYPPPDPKRTLAGLQLMCGLCIAPVALTFIF 1954
            PD++   G  +  C           + ++VL++F+FGFTC QN+F I NEL  PTP RV+ VI+  + + LTVY+ +    Y TFG  V  D+L +Y   G+ T AR  +++LV F YPLQ HPSR C+ S+ +          G + +W                                                                                                                                                                               H  +T  FL+ SY+IA+ VTDLGV+L IVGATGST +SYVLPGL Y  ++P P  KR LA +Q   G  I P+ALTFIF
Sbjct:   28 PDMNACSGDDDTPCHGEKEMVVMDMDTVRVLTVFIFGFTCQQNVFAITNELKDPTPPRVNSVILRAVGLALTVYILVAVAGYGTFGDSVESDILTNYGTGGITTTARFFVALLVCFSYPLQCHPSRMCITSIVRLLVP-SASEEGQARIW-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HIGITAVFLAASYLIALVVTDLGVILAIVGATGSTMVSYVLPGLCYFRLFPEPHIKRNLALVQFGLGCVIIPLALTFIF 255
[Close]
BLAST of mRNA_S-ischiensis_contig13.2869.1 vs. uniprot
Match: A0A7S0DJZ4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DJZ4_9EUKA)

HSP 1 Score: 122 bits (306), Expect = 6.210e-27
Identity = 82/214 (38.32%), Postives = 117/214 (54.67%), Query Frame = 1 
Query:    1 SSFFACVATLTNTLLGVSIVGLPGGFAQAGYMVGTGLVILFACLSALGLHLLAEASRAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSVTPAPQVSFRSVALLAAPRWALLIDVAVAIKCFGVATSYLVVIGDLMPAVVDDTVGGMDPESFALDRRVWVTA-GFCVVAPLAFARTLGALRYTATLSICFVIFITGMVLAYAVVPSLD 639
            +S F+ +  L+NT+LG  I+GLP  FA +GY++G+  ++ FAC S  GLHLLA+ S                                    + +VT     SF +VA  A  + AL+IDVAVAIKCFGV+T+YL+VIGDL+P  +      M     ALDRR+ +T   F ++APL   R L  LR+T+T+SI FV F + ++L ++    LD
Sbjct:   35 ASMFSSIMNLSNTILGAGILGLPHAFASSGYVLGSAFLVFFACTSTFGLHLLADVS----------------------------------VRRHAVT--RDASFYNVAQAAFSKGALVIDVAVAIKCFGVSTAYLIVIGDLLPPAMK----AMGLSGLALDRRLVITILQFAIIAPLCTLRRLDGLRFTSTMSILFVTFTSIVLLTFSADKDLD 208
[Close]
BLAST of mRNA_S-ischiensis_contig13.2869.1 vs. uniprot
Match: A0A7S2X719_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X719_9EUKA)

HSP 1 Score: 121 bits (304), Expect = 6.340e-26
Identity = 83/214 (38.79%), Postives = 113/214 (52.80%), Query Frame = 1 
Query:    1 SSFFACVATLTNTLLGVSIVGLPGGFAQAGYMVGTGLVILFACLSALGLHLLAEASRAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSVTPAPQVSFRSVALLAAPRWALLIDVAVAIKCFGVATSYLVVIGDLMPAVVDDTVGGMDPESFALDRRVWVTA-GFCVVAPLAFARTLGALRYTATLSICFVIFITGMVLAYAVVPSLD 639
            +S  +C+  L NT+LG  I+GLP  FA +G+++G  L+  FACLS  GLHLLA  S                                              +F  VA  A  R AL+IDVAVAIKCFGVATSYL+V+GDL+P  +      M     A +R++ +T     VVAPL F + L ALR+T+ LSI  ++F+T +++ YAV PSL+
Sbjct:   36 ASLMSCIVNLANTILGAGILGLPHAFASSGWVLGVILLCFFACLSGFGLHLLATISVERFSENR------------------------------------DATFYKVASQAFERGALVIDVAVAIKCFGVATSYLIVVGDLLPVALKS----MGLSGLATNRQLIITVLTGAVVAPLCFLKKLDALRFTSALSIGMLLFVTIVIIIYAVEPSLN 209
[Close]
BLAST of mRNA_S-ischiensis_contig13.2869.1 vs. uniprot
Match: K8Z9K9_NANGC (Aa_trans domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z9K9_NANGC)

HSP 1 Score: 112 bits (280), Expect = 1.530e-25
Identity = 55/112 (49.11%), Postives = 74/112 (66.07%), Query Frame = 2 
Query:  806 GSPREVLQVLSIFVFGFTCHQNIFTICNELHHPTPARVSGVIVCTMSIVLTVYLGLVWGAYATFGSGVAGDLLQSYPQSGLLTAARLCMSMLVAFCYPLQAHPSRKCLLSVW 1141
            G+   +LQVL IFV+ +T HQN   +CNEL +PTP R    I+    + L VYL L + AY T+G+ +  DLL S+P S L T+ R  +S+LV F YPLQAHP+R CLL++W
Sbjct:    3 GTGPAILQVLPIFVYSYTAHQNFGLLCNELANPTPRRTRQTIMAATGLSLGVYLTLAFAAYLTYGAALQRDLLLSFPASLLSTSLRAALSVLVTFTYPLQAHPARTCLLALW 114
[Close]
BLAST of mRNA_S-ischiensis_contig13.2869.1 vs. uniprot
Match: R1FE80_EMIHU (Aromatic amino acid permease n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FE80_EMIHU)

HSP 1 Score: 116 bits (290), Expect = 4.130e-24
Identity = 59/119 (49.58%), Postives = 77/119 (64.71%), Query Frame = 2 
Query:  809 SPREVLQVLSIFVFGFTCHQNIFTICNELHHPTPARVSGVIVCTMSIVLTVYLGLVWGAYATFGSGVAGDLLQSYPQ-SGLLTAARLCMSMLVAFCYPLQAHPSRKCLLSVWKACGSGD 1162
            +P + L  L +FVF +TCHQNIF+I NEL  PTP R   V V  +   L VY+ L    Y+TFG  V  D+L SYP  +G++  ARL +S++V+ CYPLQAHPSR C  S+ +ACG  D
Sbjct:  227 NPSQTLHALPLFVFSYTCHQNIFSITNELSDPTPQRNIKVCVLAVGAALAVYIILGASGYSTFGGLVDHDILASYPSDNGIVAVARLAISLVVSCCYPLQAHPSRACTTSIVRACGGED 345
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig13.2869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1F5_ECTSI7.980e-6136.87Amino acid/polyamine transporter n=2 Tax=Ectocarpu... [more]
A0A835YKE8_9STRA3.780e-3446.05Transmembrane amino acid transporter protein-domai... [more]
F0XYI5_AURAN1.870e-2940.78Uncharacterized protein AOT5 n=1 Tax=Aureococcus a... [more]
A0A7S2WEX7_9STRA9.110e-2938.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1TS32_9STRA2.530e-2835.54Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A7S2BAD5_9STRA7.020e-2825.74Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0DJZ4_9EUKA6.210e-2738.32Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S2X719_9EUKA6.340e-2638.79Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
K8Z9K9_NANGC1.530e-2549.11Aa_trans domain-containing protein (Fragment) n=1 ... [more]
R1FE80_EMIHU4.130e-2449.58Aromatic amino acid permease n=3 Tax=Emiliania hux... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig13contigS-ischiensis_contig13:93912..103327 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score149.4
Seed ortholog evalue3e-33
Seed eggNOG ortholog2880.D7G1F5
Preferred nameAVT7
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003333,GO:0003674,GO:0005215,GO:0005290,GO:0005302,GO:0005310,GO:0005313,GO:0005326,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0006950,GO:0006995,GO:0007034,GO:0007154,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015075,GO:0015171,GO:0015172,GO:0015173,GO:0015174,GO:0015175,GO:0015179,GO:0015181,GO:0015183,GO:0015189,GO:0015194,GO:0015238,GO:0015318,GO:0015556,GO:0015711,GO:0015740,GO:0015800,GO:0015801,GO:0015802,GO:0015804,GO:0015807,GO:0015809,GO:0015813,GO:0015817,GO:0015819,GO:0015825,GO:0015828,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0022889,GO:0031090,GO:0031166,GO:0031224,GO:0031300,GO:0031301,GO:0031310,GO:0031667,GO:0031668,GO:0031669,GO:0032329,GO:0032974,GO:0032975,GO:0033554,GO:0034220,GO:0034486,GO:0034490,GO:0034491,GO:0042221,GO:0042493,GO:0042594,GO:0043090,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043562,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045117,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0051938,GO:0055085,GO:0061459,GO:0070778,GO:0071496,GO:0071627,GO:0071628,GO:0071702,GO:0071705,GO:0071944,GO:0089709,GO:0090454,GO:0090513,GO:0090514,GO:0090515,GO:0090516,GO:0090517,GO:0090518,GO:0098588,GO:0098655,GO:0098656,GO:0098805,GO:0098852,GO:1901474,GO:1901481,GO:1901482,GO:1902022,GO:1902023,GO:1902024,GO:1902475,GO:1903400,GO:1903401,GO:1903825,GO:1903826,GO:1905039,GO:1990822
EggNOG free text desc.amino acid
EggNOG OGsCOG0814@1,KOG1305@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionAmino acid transporter, transmembrane
Ec32 orthologEc-07_000830.1
Exons11
Model size1978
Cds size1038
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig13.2869.1prot_S-ischiensis_contig13.2869.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig13 93912..96529 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815680.57098-CDS-S-ischiensis_contig13:93911..940911622815680.57098-CDS-S-ischiensis_contig13:93911..94091Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 93912..94091 -
1695739846.5561156-CDS-S-ischiensis_contig13:93911..940911695739846.5561156-CDS-S-ischiensis_contig13:93911..94091Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 93912..94091 -
1622815680.582409-CDS-S-ischiensis_contig13:94925..951161622815680.582409-CDS-S-ischiensis_contig13:94925..95116Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 94926..95116 -
1695739846.566309-CDS-S-ischiensis_contig13:94925..951161695739846.566309-CDS-S-ischiensis_contig13:94925..95116Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 94926..95116 -
1622815680.5942516-CDS-S-ischiensis_contig13:95287..954211622815680.5942516-CDS-S-ischiensis_contig13:95287..95421Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 95288..95421 -
1695739846.5761232-CDS-S-ischiensis_contig13:95287..954211695739846.5761232-CDS-S-ischiensis_contig13:95287..95421Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 95288..95421 -
1622815680.6040807-CDS-S-ischiensis_contig13:95437..958051622815680.6040807-CDS-S-ischiensis_contig13:95437..95805Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 95438..95805 -
1695739846.5839462-CDS-S-ischiensis_contig13:95437..958051695739846.5839462-CDS-S-ischiensis_contig13:95437..95805Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 95438..95805 -
1622815680.6162968-CDS-S-ischiensis_contig13:96364..965291622815680.6162968-CDS-S-ischiensis_contig13:96364..96529Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 96365..96529 -
1695739846.5915291-CDS-S-ischiensis_contig13:96364..965291695739846.5915291-CDS-S-ischiensis_contig13:96364..96529Schizocladia ischiensis KU_0333CDSS-ischiensis_contig13 96365..96529 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815680.6281426-UTR-S-ischiensis_contig13:96529..965371622815680.6281426-UTR-S-ischiensis_contig13:96529..96537Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 96530..96537 -
1695739846.6038961-UTR-S-ischiensis_contig13:96529..965371695739846.6038961-UTR-S-ischiensis_contig13:96529..96537Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 96530..96537 -
1622815680.638346-UTR-S-ischiensis_contig13:97617..977201622815680.638346-UTR-S-ischiensis_contig13:97617..97720Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 97618..97720 -
1695739846.6117034-UTR-S-ischiensis_contig13:97617..977201695739846.6117034-UTR-S-ischiensis_contig13:97617..97720Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 97618..97720 -
1622815680.6508648-UTR-S-ischiensis_contig13:98663..989351622815680.6508648-UTR-S-ischiensis_contig13:98663..98935Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 98664..98935 -
1695739846.6198285-UTR-S-ischiensis_contig13:98663..989351695739846.6198285-UTR-S-ischiensis_contig13:98663..98935Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 98664..98935 -
1622815680.663104-UTR-S-ischiensis_contig13:99121..992621622815680.663104-UTR-S-ischiensis_contig13:99121..99262Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 99122..99262 -
1695739846.6284828-UTR-S-ischiensis_contig13:99121..992621695739846.6284828-UTR-S-ischiensis_contig13:99121..99262Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 99122..99262 -
1622815680.6766868-UTR-S-ischiensis_contig13:100932..1010431622815680.6766868-UTR-S-ischiensis_contig13:100932..101043Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 100933..101043 -
1695739846.6385953-UTR-S-ischiensis_contig13:100932..1010431695739846.6385953-UTR-S-ischiensis_contig13:100932..101043Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 100933..101043 -
1622815680.688431-UTR-S-ischiensis_contig13:102713..1029221622815680.688431-UTR-S-ischiensis_contig13:102713..102922Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 102714..102922 -
1695739846.6488955-UTR-S-ischiensis_contig13:102713..1029221695739846.6488955-UTR-S-ischiensis_contig13:102713..102922Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 102714..102922 -
1622815680.7026012-UTR-S-ischiensis_contig13:103231..1033271622815680.7026012-UTR-S-ischiensis_contig13:103231..103327Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 103232..103327 -
1695739846.6583636-UTR-S-ischiensis_contig13:103231..1033271695739846.6583636-UTR-S-ischiensis_contig13:103231..103327Schizocladia ischiensis KU_0333UTRS-ischiensis_contig13 103232..103327 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig13.2869.1

>prot_S-ischiensis_contig13.2869.1 ID=prot_S-ischiensis_contig13.2869.1|Name=mRNA_S-ischiensis_contig13.2869.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=346bp
MSIVLTVYLGLVWGAYATFGSGVAGDLLQSYPQSGLLTAARLCMSMLVAF
CYPLQAHPSRKCLLSVWKACGSGDGGIHGGSAVWDGGGGVANGYGDNHRR
HQREGGHEEGVGGGGGEGEGGGAQAGVSSLLWPGGGGGGGGGGGGGGSDG
GGGGGGGEGAAGRGGGGGGRGGGEGGRGGSRRRGRGGRRGRRWRRTRRRR
RGNRMAATSTRARRKQPEHKRRRGVGGGGGGGGQEEEEEEEEEGGDVKAE
VVARTEGLRHSLVTLAFLSLSYVIAMTVTDLGVLLEIVGATGSTAISYVL
PGLLYLGMYPPPDPKRTLAGLQLMCGLCIAPVALTFIFMGEGAGA*
back to top

mRNA from alignment at S-ischiensis_contig13:93912..103327-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig13.2869.1 ID=mRNA_S-ischiensis_contig13.2869.1|Name=mRNA_S-ischiensis_contig13.2869.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9416bp|location=Sequence derived from alignment at S-ischiensis_contig13:93912..103327- (Schizocladia ischiensis KU_0333)
TCTAGCTTTTTCGCATGCGTGGCCACCCTGACCAACACTCTGCTGGGGGT
GAGCATCGTGGGGCTCCCCGGCGGTTTTGCCCAGGCCGGATACATGGTGA
GCTACTCATGCAGCTGTATCCGCTCTAAACTGAAGCACAGTGCGTAGAGG
TGTGAACTGGCAAGGCTTGCCGGTCTAGCTGTTAGCCGGTCCTGTGACCG
GTCGGTTTCAACCGGTTGCTGGTAACGGCCAACATATTGCCAAAAAATCA
ACGAATAAAGGTCATGTCACCCGCTCCGGCTACGCGATTGGCCACCGGTC
GGTTGACCGGTTAATCCGGTTCACTGGTACCGACCGGTAAAACCGGCACT
AGTTCACACACTACCGTATGGCTACGGCAGGCAATTCATGAGTTACCCCC
GGCAGGTGGGCACCGGCCTAGTGATACTTTTTGCGTGCCTGTCAGCCTTG
GGCCTGCACCTGCTGGCAGAGGCGTCGCGCGCCGCCACCGCTGCCGCTGC
CACCGGCGCTCACGGTGGCGGAGGCGGGGGCGGGGGCGACAATGGCCAAG
GGCACCACCACCACCACCGCCGCCCCGGCCCGGGGCAGGGATCTGTGACG
CCAGCTCCGCAGGTGTTACTCTTGTCCAGTGATGGAAGATCAAAGCAAAT
CAACCTATTTATCGACCGTACTGATCTGTTTTGAGTGGTAGATAAACGGC
GAGTTCCGGGTCCCGTGCCAAAGACTCGTCCCGAAACGGGACTCAACGAG
GCCCTTCCTTCCCTCGCAGGGCAAGAAGAAAACAAAACTAAGAAGGAAAG
GGGCGGGGTGATGAGGAAAGGGAAGAGGCGCACGGAAGTGTCTTGTGCTC
ACAGTGGGGCATGCGGGTGGCGCAGGTGGGGGCGAAGCCGCACATGAACA
CCGAGATCTATATATGTATCGATGGTCGATATTCGATAGTGTGACACACA
CTAAATCCAAGTAGTTTTTAGCATGAAGATTAAAAGCGAGTGGAAAGAAG
GAGGTGTTCCTACTTACGCGAGTTCAGGGCCCCCTTCCCCGGAAGCCCGT
CTTTCACTCGCCTTCACTCGCAGGGCATATAGAGCAGTCAGTAGCGCCGC
CCACGCAATCAGTCGAGCCCGATAACTGTCTACTGATCGATATTCCATCA
CTGCTCTTGTCAGACCAGTGCTGTATACACTACTCGTAGCCAACCAGTCT
ACTGACCGGCTCCACAGGTGTGTATTTTCTCTTGTATGGCGAGTGCTGTA
TGCCTACAAGCATTTGTATATATACGAAGTATGTACTCACGCAACGGTTG
TGCTTGCCGTAGTCCTGAGACCATTGACCGCGCGCCTCGAGCGGTTGATA
CCGACTTGTGCTTTGCTGACCGTGATGCGCACGGTTTCGCTCCATGTGGT
TGGTTGAGTCTCAAGTGTCTAGCGAGGCCGTAAACGACGGTGTATAACGA
CCCCCTTCGGGACAACCGACGGGCAATCATTTCTCGCCGGATCCTCGGTT
TTCGGATTCGATCGAAAACCCTTGGAATGAAAGCCTTTGGTCAAGACAGG
ATATACTCCAGAGTTTCGATTTGATCGAAGACCGATCCGGCAAGAAAAAA
TTGCCCGCCGGTTGTCCCGAAGGGGGTCGTTATACACCGTCCTTTACGGG
TAGTGTACTTGTACGGGCGGTCCCTTCCACACCTAGTATGGCTTGCCGGG
GGCGGGGAGGGGAGATTGGTCTGCCGTCGACGGGACTACGACAAGCACAA
CGCGAGCACGTATATGGATAGTGTACACGTATGCAATTCCAAGTACTTCG
AAGTAATGTACAGTACTTGCAGTCATAGCCTCCTAACTACTTGGGTTATT
CGAAACTCGGTCTCCTTAACTACAGTACTTTGATGCTCTGAAGTGTCTAA
CTGCTTGCATTATTTAAAACTCGTTCTCCTTATCTACTTGGACATTTTGA
AATGAAAGTGTCTGAACTACTGTGCTTGGGTTGTTTGAAACTCGGTCTCC
TTAGCTACTCGGATGTTCTGAAAATAACGGTCTCGGGACTACGGCAAGCA
CAACGTGGGTACTTCTCCTCGAGTACACGTACTACGTAGTAAACATATGT
ATACGAAGTGTGTACTCGTACTCGTACATGCTTACAGTCTCACGCTTGTG
AAATTGAATGTACTCTCTCCCTCTCCCTCTCTCTCTCCCTCTCTATCTCC
CTCTCCCTGTCCCTCTCACTCTCCCTCTCCCTCTCCCTCTCTTGCTCTGT
GCCCGTGGAACGCGTTCGCCCACCAGGGGGGCAGCAGCTTCCGATCCGTC
GCGCTCCTCGCGGCCCCGCGCTGGGCCCTGCTGATAGACGTGGCGGTGGC
CATCAAGTGCTTCGGCGTGGCCACCAGCTACCTGGTCGTCATCGGGTGAG
TGCTGCGTATGTGATTCATATATAAATTGTAACGAGGTACAATCGCACAT
GTGTGTGATTGAGTGCTCTCGTATTAGTTTTGGGCATGAAGATACAAAGC
GAGTGGATAAGAGGAGGTGTACCTACTTAGGCGAGTTCAGGGCCCCCTGC
CCCGGAAACCCGTCTTTTCGCTCGCCTTCACTCGCAGGGCACAAGTGTAG
AGCAGAAAAACAAAGAAAAACAAGGAAAAACAAAGGAGGAAGAGGGCGGA
AAGGAACGTATTGGTTGTTACCCCTTCTAAGAATTGAGTCTTCTCATATT
TTACTGTACCTTACAGTAAGTAGTTGTTATTTGCCCTTCGGCGTGGCCAC
CAGCTACCTGGTCGTCATCGGGTGAGTGCTGCGTAGGTATTGTATGCACC
ATACAGTAAGAGCTACTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTTTCTGTCTCTCTCTCCCTCTCACTCACTCCC
TCCATGCTCTCCCTCCTTCCCTCCTTCTCTCCCTCCCTCCCTCTTTCCCC
TTTCCCTCTCTCCCTCCCCCTCCCTCACCTAGAAACCTACACCCTCCCTC
CCCCCCCCACCCCCCCTTCCCCCTTGTGTGTGTGTGTGTGTGTGTGTGTC
CGGCCCCCTCCTCCCCCCTCCCTTCTCCTTCCTTCCCTCCCTCCCTCTTT
CCCCTTTCCCTCTCTCCCTCCCCCTCCCTCACCTCAAAACCTACACCCTC
CCTCCCTCCCCCCCCCAGCCCCCTTTCCCCTTGTGTGTGTGTGTGTGTCC
CGCCCCCTCCTCCCCCCTCCCCTTCTCCGTCCTTCCCTCCCTCCCTCTCT
CTTTTCCCTTTCCCTCTCTCTCTTCCTCGCGTCACAACCTACACCCTCCC
TCCCTTCCCCGTTGGATTGGATCACGCTCATGGTCTCTGTCCCTTCCATC
TCTACATCGACAAGCCCGCTTCCCTGTTGAGGGCTTTTGGGGACCAACCC
GTTGAACGCGATAATAAGGGGCGCAACCCGGCTGCGCTGCAGAGCAGAAC
TCAACGCCTATCCCCACTTCCCCCTTTGTGTGTGTGTGTGTGTGTGTGTG
TGTCCCAGGGATCTGATGCCGGCCGTCGCCAACAACATTGTGGGGGGTAT
GGGAAAAATATTGATTGATCTGGCGGCCGATCAATCATTGTGCTATGGTT
GCTTAGTGTTAGTACTCCCTATTGATCACGTGGCTAGTGCGCGGTACTCG
CCGTCGCATTTGCTGATGCTTTCTTCCGTCGTCTGCAACTTCAACGTCTG
CACGCTCTTACAGGTACGTCCCGCAACGTGGCACGAGAGAGACCCCCCTA
CATTGCACCTGTATTGCCCCTGCATCGCCCCCCTTAGTGGCTTCTTTTCT
TGATTTTTATGCCCTGCGGGTGAAAAGAAGGGCTTCTGGTGAGGTCCCCA
CCTTTGGTTGTTGGGACGGGGCCCGGAACTCGCATGCCATCCAAAATAAT
TTCAAATCAATATTGATCAATATCAAATATTTTAAAAGTAGTTTGATGAA
TGCAAGTTCCGATATTTATTCAATGGTTCATGATCGATCATTGTTTTTAT
CAATACAGAACTCTACCCCCCCCCCCCTGCCCGCTTGTGTGTGTGTGTGT
GTGTGTGTGTCCCAGGGATCTGATGCCGGCCGTCGTTGACGACACTGTGG
GCGGTATGGACCCGGAGTCCTTCGCTCTGGACCGGAGAGTGTGGGTCACC
GCGGGGTTCTGCGTTGTTGCACCCCTGGCCTTCGCCCGCACGCTTGGGGC
GCTGAGGTGCGTCGTGGCGGGGGTGGTCCTGGTGGGGGTGGTGGTGGTGG
TGGTGGTGGAGGTGCAGGTGACTGTGGTTGTACGTGGTGGTGATGCGTGC
TTGGGTGGGAGGGTGATCGGGCCAAGGAATCACCAATCACACACACGTAT
GCACACGCCACACACATGCTCACGCCCACAACTTGTCTTCAGGTACACGG
CCACCCTCTCGATATGCTTTGTCATATTCATCACCGGCATGGTGCTCGCC
TACGCAGTAGTACCCTCTCTCGACGCCTGCCCTCAACAAGCCCTCCTGGC
GGCGGCGGCGGCGGCGGGGGGGGGGGGGGAGCGGGGGAGCTGGGGGGGCG
GGGACAGACTTGGGCGGCGGCCCGGCACCTGATGTGTCAATTTCCGTCGG
CGGTGGCAACGGCAGTTGTTTTGAGGGGGCGTTTGCAGCGGGAAGCCCGA
GAGAGGTTTTGCAGGTGAGGGGGGGAGGCGTGTCAGGGTTGCCGCGATGT
CCCGGCGAGATCGAACTACCTTATTCGTCGGGGAGATCGTGCCCCCCCGT
GCGAATTTTCGGGAGAAATTTTCTCGCCGAGTACTGGTCGGATTCGCGCA
GGAAAACTCGGAAATTCTCCCTCAGGACCCTGGGGGAACTTTTTCGAGGG
CTTTCGGGGAAAGGCAGGACCTTCCCGGCGAGAAGTCCCCCCCCTGAAAA
TTGTCCCGTGGGGGCAAAATCTCTCTGGCGATGACGGTAGCGTGATGTGA
TGTGATGTGAGGTGTGTGAACTCCCTGTGCCTTAGGCGCCGTTTTTGGCA
TGAAGATACAAGCGAATGGGAAAGAGGTGTTCCTACTTACGCCAGTTCAG
GGCCCCCTTCCCCGGAAGCCTGTCTTTTCACTCGCCTTCAGTCGCAGGGC
ATTCAGAGCAGAAAAACAAAACAAAGAACACCAAAGGGAAAAAGGGCGGG
CAGAAATAACAACTGAAGATTAGGCTCCGTTTACGATCCCCGGTCCCCAA
TGATTCCTATTCCCATCCTATTGTTGGCCTGTTGAGGAGAGTCGTGACCA
CCGGTCATTTCAGTGGCCCGGACTAGTAGTCAGCGTCGAGGGCGCTTCAC
GACCCCCCGGCGCTCGATGTTCTCATGCAACGGGTCAATCTCCCTCCGGC
ACATATATGTGTATACTACGTAGTAGTATATGTACTAACGTTCGGGTGAG
GTTTCTCGTCTCTGTGCATGCCCTGGACCCGAACGACCTCACACTCACAC
ACACATATGTATATGTACTGATGTTGTGTTTGCAGTAGTCCTGAGACCAT
TGACCACGCGCCTCGGTCGAGACGGAGCAGTATGTACAGTATATATGAGT
ACTCTGTATGTACCGCATCACGTCATACCACACCATATCACGTCGGTGCC
CCCCCAGGTCCTGTCCATCTTTGTGTTTGGGTTCACGTGTCACCAGAACA
TCTTCACAATCTGCAACGAGCTGCACCATCCCACACCCGCCAGAGTCAGC
GGGGTTATCGGTAAGTGCCAGCAAGCGAATCAACCTATCTATCGACAGTA
CTGATATAGTTGAGTGGTAGAAAATGTATGCATCTATCAATGGTCGATAT
TCGATAGTTTGACCCACACTAGATCCAAGTAGTTAGTAACACCACCCCAC
ACCCGCCAGAGTCAGCGGGGTTATCATTGCGTTGGTTCATGTAAGTTGTA
ACGAGGTACAATCGCACGTGTGTGCGATTTACTGTTCTCGTATTGGTAGT
TGTTTCATTGAAGAATTGAATGTTCTTATATTAGTGATTATCACATCAAG
GAACTAAGAACAAGGCGGGGAGGGGGGGGAGAGGAAGAAAGGGGGTTATC
GGTAAGTGCGAACTGTGATGTGATGTCAAACTACAGCAAATTAGAGTACA
CAGCACATCACATCAGTGACACTTACATGACGTGATGTGAGCAACCCACT
CCCGCCAGAGTCAGCGGGTTATCGGTATCTGCCAGTGATAGAATATGTAA
GCAGATCAACCTATTTATCGACACTCCTGATTTCAAATTATTTCGATGGC
ACGCGAGTTCCGGGTCCCGTCCCAACAACCTAAGGTGGGGACCTCACCAG
AAGCCCTTCGCACCCGCAGGGCACAAAAATCAAGAAAAGAAGCCAGTAAG
TGGGGCAATGCTTGAGCAGTACAGGGGCAATGTAGGGGGCTCTCTCCGTG
CCGCGTTGCGGGACGTACCTGCGAGAGCATGCACACGATATATCTATCGA
TAGTCGATAGTTTGACCCACACTCAATCCAAGTAGTTAGTAACGCCACAA
CAAAATCAGTCGAGCCCGACAACTATCTACCGATCGACATTCCATCACTG
GCGTCGATCAATGCCCCCTGCCCCACCCCACCCCGCCCCGCCCGGCCCGG
CCCGGCCCGCCCGACCGACCAAACCGCAAGCAGTGTGTACCATGTCCATC
GTGCTGACCGTCTACCTGGGCCTGGTGTGGGGTAATTAGGGTTAATTAGA
CCCACAATGAAGGCTACTTAGAGTAGGCCCTAACTATCCTCGAAGTGCCA
ACCCTCCGGTGCCCCGGCCGCCCCCCCAAACCGCAAACAGTATGCACCAT
GTCCATCGTGCTGACCGTCTACCTGGGCCTTGTGTGGGGCGCCTACGCCA
CCTTTGGGTCCGGGGTGGCGGGGGACCTCCTGCAGAGCTACCCCCAGTCG
GGCCTGCTGACCGCCGCCCGCCTGTGCATGTCCATGCTCGTGGCCTTCTG
CTACCCCCTGCAGGTAAGCAACTGTACCTAGTACAGTACCATGTAAAGTA
GTATTAGCAGGAACAACTGTATCACAAGAGACCCCTTCTCCACGCCATTA
TTCTCTCCCGCCCTATCCCTTGCTTGTTGTTCTTTTTTTCCTGCTCTGTA
TGCCCTGCGAGTGAAGGCGGGTGCAAAGAAGGGCTTCCAAGGGTGGGGCC
CTGAACTCGCATAAAATAAGGACACCTCTTCTTTCCCACTCGCTTGTTTG
TCTTCTTGCAAAACCGTGTATCGGGAACAGTATTGCTGCACACAATGCAA
CTTGCATGGACCCCACGTGCCCCCCACCTGCCCCGCTTGCTCGCCTGTAC
CCCCACCAGCCCTGCCGGGGGCGGCCGGTGCCCGAGTGTGCAGGCATTTT
TTATTACTATTATTTTTTTTTCGTGTTCTTAGTTCCTTGATGTGACAATC
ACTCATATAAGAGCACTCAATTCTTAGATGGGACAACTAGGTACTAATAC
GAGAACACTCAATCTCACACACGCGTGCGATTGTACCCCGTTACAATTTT
TGTGAATCACCCACTGGCGCAGGCGCACCCTTCCCGCAAGTGCCTGCTCT
CCGTGTGGAAGGCGTGCGGGTCGGGCGACGGAGGCATTCACGGCGGCTCG
GCCGTCTGGGACGGGGGGGGGGGCGTTGCTAACGGCTACGGTGACAACCA
CCGCCGCCACCAGCGAGAAGGGGGGCACGAGGAGGGGGTGGGAGGGGGAG
GGGGAGAGGGGGAGGGAGGGGGGGCGCAAGCGGGGGTTTCGTCACTGCTG
TGGCCGGGAGGAGGAGGAGGCGGGGGTGGCGGCGGTGGTGGTGGTGGTAG
TGATGGAGGAGGAGGAGGAGGGGGGGGGGAGGGGGCAGCGGGGCGGGGAG
GAGGGGGGGGAGGACGAGGAGGAGGAGAGGGGGGGCGAGGGTAGGAGGAG
GAGGAGGGGGAGCAGGAGGAGGGGGAGGGGGGGGAGGAGGGGGAGGAGGT
GGAGGAGGACAAGGAGGAGGAGGAGGGGGAACAGGATGGCGGCCACCAGC
ACCAGGGCCCGGCGAAAGCAGCCCGAGCATAAACGGCGGCGTTGTACAGT
CCTTGCAGGCGGGCAAGGGGAACCCGGGCCGGCCGCCCGTTAATGGGGAC
ACCGGGGGACACAGTTGTGGCGGCGGTGGCAGTGGTGTTCCTGGCAGCGG
TGGTGGGGGGGGGGGCGGGGACGGACCTGAGGGGGCGGGGAGCGGGCGAG
GGCTGGGGAAGGGGGAGTGGGGGGGGGGGGGGGGGGGGGGGGGCAGGAGG
AGGAGGAAGAGGAGGAGGAGGAGGGGGGGGATGTGAAGGCAGAGGTTGTT
GCACGGACGGAGGGCTTGCGTCACTCGCTTGTGACGCTGGCATTCTTGTC
GCTGTCGTACGTGATTGCCATGACGGTGACGGACCTGGGCGTGCTCCTCG
AGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGC
GTGCGTGCGTGCCTGTGTGTGTGTGTGTGTTCGCGCGTGCGTGTGCGCGC
GCGTGTGTGTGTGTGCATGCGTGTGCGTGCGTGCGTGCGTGCATCACATC
ACATCACATCACAACAAATCATCGGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGCGTGTGCATGTGTGTGTGAGAGAGAGAAAGTACTGTTGTACTCGT
GAGTACTACTACTGTAGTGAAGCACGATGGGTATGGTACTTCGTGCGAAG
TATGTGTGGGATGTTCAAGCCACGGGATGTTCAATTGGCAAGACGCTAGG
TATTGTTGCAGCACTTTTGACACACGCGGCTCCGTCTCGGTCGAGTAGGT
ATTGATACTCGAGTAGAGTACATACTTGGTATGTATGTATGTACTGATTG
GCTTGTTGCGACAAAACCCATGCGTGCATTGCCGACAGCCCTAAGGAACG
TATTGATGCGGCGTGTAATACATAAACCAAGCACAATACTTTTGGAGCGT
GCGTTTTCAGTTGCCAGGTAGTTGGGGGAGATAGAGTGTGCACCGCGTGG
GTGCGGAGGCGACCATACATGTGCTGTACAGTACTCGAGTATGTGAACAA
TGAATGTTGTATTCACACACTCGAGCACGGTTAAACCAACCCTACCCCTC
TCCCACTCCCTGGCAGATTGTCGGGGCGACGGGCTCCACGGCCATATCCT
GCTTAGGGCTAGGGTAAACCCGAAGTGTTGTACAACCCGCACACTCGAGC
GCGGTTCAAACCTACCCCTCTCCCGCTCCCTGGCAGATTGTCGGGGCGAC
GGGCTCCACGGCCATCTCCTACGTCCTGCCGGGCCTGCTCTACCTGGGCA
TGTACCCGCCCCCGGACCCCAAGCGGACACTGGCGGGGCTCCAGCTCATG
TGCGGCCTGTGCATCGCCCCCGTGGCGCTCACCTTTATTTTCATGGGCGA
GGGCGCGGGGGCGTGA
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig13:93912..103327-

>mRNA_S-ischiensis_contig13.2869.1 ID=mRNA_S-ischiensis_contig13.2869.1|Name=mRNA_S-ischiensis_contig13.2869.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2076bp|location=Sequence derived from alignment at S-ischiensis_contig13:93912..103327- (Schizocladia ischiensis KU_0333)
ATGTCCATCGTGCTGACCGTCTACCTGGGCCTTGTGTGGGGCGCCTACGC
CACCTTTGGGTCCGGGGTGGCGGGGGACCTCCTGCAGAGCTACCCCCAGT
CGGGCCTGCTGACCGCCGCCCGCCTGTGCATGTCCATGCTCGTGGCCTTC
TGCTACCCCCTGCAGATGTCCATCGTGCTGACCGTCTACCTGGGCCTTGT
GTGGGGCGCCTACGCCACCTTTGGGTCCGGGGTGGCGGGGGACCTCCTGC
AGAGCTACCCCCAGTCGGGCCTGCTGACCGCCGCCCGCCTGTGCATGTCC
ATGCTCGTGGCCTTCTGCTACCCCCTGCAGGCGCACCCTTCCCGCAAGTG
CCTGCTCTCCGTGTGGAAGGCGTGCGGGTCGGGCGACGGAGGCATTCACG
GCGGCTCGGCCGTCTGGGACGGGGGGGGGGGCGTTGCTAACGGCTACGGT
GACAACCACCGCCGCCACCAGCGAGAAGGGGGGCACGAGGAGGGGGTGGG
AGGGGGAGGGGGAGAGGGGGAGGGAGGGGGGGCGCAAGCGGGGGTTTCGT
CACTGCTGTGGCCGGGAGGAGGAGGAGGCGGGGGTGGCGGCGGTGGTGGT
GGTGGTAGTGATGGAGGAGGAGGAGGAGGGGGGGGGGAGGGGGCAGCGGG
GCGGGGAGGAGGGGGGGGAGGACGAGGAGGAGGAGAGGGGGGGCGAGGGC
GCACCCTTCCCGCAAGTGCCTGCTCTCCGTGTGGAAGGCGTGCGGGTCGG
GCGACGGAGGCATTCACGGCGGCTCGGCCGTCTGGGACGGGGGGGGGGGC
GTTGCTAACGGCTACGGTGACAACCACCGCCGCCACCAGCGAGAAGGGGG
GCACGAGGAGGGGGTGGGAGGGGGAGGGGGAGAGGGGGAGGGAGGGGGGG
CGCAAGCGGGGGTTTCGTCACTGCTGTGGCCGGGAGGAGGAGGAGGCGGG
GGTGGCGGCGGTGGTGGTGGTGGTAGTGATGGAGGAGGAGGAGGAGGGGG
GGGGGAGGGGGCAGCGGGGCGGGGAGGAGGGGGGGGAGGACGAGGAGGAG
GAGAGGGGGGGCGAGGGGGGAGCAGGAGGAGGGGGAGGGGGGGGAGGAGG
GGGAGGAGGTGGAGGAGGACAAGGAGGAGGAGGAGGGGGAACAGGATGGC
GGCCACCAGCACCAGGGCCCGGCGAAAGCAGCCCGAGCATAAACGGCGGC
GGGGAGCAGGAGGAGGGGGAGGGGGGGGAGGAGGGGGAGGAGGTGGAGGA
GGACAAGGAGGAGGAGGAGGGGGAACAGGATGGCGGCCACCAGCACCAGG
GCCCGGCGAAAGCAGCCCGAGCATAAACGGCGGCGGGGAGTGGGGGGGGG
GGGGGGGGGGGGGGGGCAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGGGG
GGGATGTGAAGGCAGAGGTTGTTGCACGGACGGAGGGCTTGCGTCACTCG
CTTGTGACGCTGGCATTCTTGTCGCTGTCGTACGTGATTGCCATGACGGT
GACGGACCTGGGCGTGCTCCTCGAGGGGGAGTGGGGGGGGGGGGGGGGGG
GGGGGGGCAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGGGGGGGATGTGA
AGGCAGAGGTTGTTGCACGGACGGAGGGCTTGCGTCACTCGCTTGTGACG
CTGGCATTCTTGTCGCTGTCGTACGTGATTGCCATGACGGTGACGGACCT
GGGCGTGCTCCTCGAGATTGTCGGGGCGACGGGCTCCACGGCCATCTCCT
ACGTCCTGCCGGGCCTGCTCTACCTGGGCATGTACCCGCCCCCGGACCCC
AAGCGGACACTGGCGGGGCTCCAGCTCATGTGCGGCCTGTGCATCGCCCC
CGTGGCGCTCACCTTTATTTTCATGGGCGAGGGCGCGGGGGCGTGAATTG
TCGGGGCGACGGGCTCCACGGCCATCTCCTACGTCCTGCCGGGCCTGCTC
TACCTGGGCATGTACCCGCCCCCGGACCCCAAGCGGACACTGGCGGGGCT
CCAGCTCATGTGCGGCCTGTGCATCGCCCCCGTGGCGCTCACCTTTATTT
TCATGGGCGAGGGCGCGGGGGCGTGA
back to top