mRNA_S-ischiensis_contig12.2759.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig12.2759.1 vs. uniprot
Match: A0A836CKI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKI8_9STRA) HSP 1 Score: 174 bits (441), Expect = 2.760e-49 Identity = 80/171 (46.78%), Postives = 111/171 (64.91%), Query Frame = 2
Query: 428 LLASTGTFFAILATPCLPLLAIFDTSRYPITHQSCADAFFCGATVATCCYTLLFCILQGAYPDHRGLELSCRVKVAVLFAFLVGFLLYLPVGIPLACPARLLSVAECIEDEHLAESYCYGNIYPANDMYTILYTYRDCPGVYTMRTLAQTVCVFSILLYTLTFCLDLGPEM 940
+L + FF +A P L + A+FDTS YP HQ+ AD FFC +T++ + IL YPD++ L LS R+K V FL+ FL+Y+P+GI + CPARLL + EC E EHL+ +YC +P D YTIL+TY+DCP +TMRT+AQ C+FS+L ++ TF DL P +
Sbjct: 26 VLCTVACFFGAIAQPVLVIAAMFDTSHYPAIHQTAADTFFCLSTISLLSFMSFMRILSDLYPDNKHLALSGRIKAVVFVIFLLAFLVYIPIGIAITCPARLLGIKECEEVEHLSSNYCESYAHPDMDGYTILWTYKDCPVRFTMRTVAQFTCIFSLLAFSATFAFDLRPTL 196
BLAST of mRNA_S-ischiensis_contig12.2759.1 vs. uniprot
Match: A0A8J5XHM7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XHM7_DIALT) HSP 1 Score: 134 bits (336), Expect = 5.860e-33 Identity = 84/283 (29.68%), Postives = 129/283 (45.58%), Query Frame = 2
Query: 143 LVRVAPLCGFFIGIVTYTACRAIAVVEDTYLGDIPWPFFSDTGRDRPAYYVFVAGMLLGAPCYAMTFYLIHRRTH-QWLGQAGAAGGEALL-----PGGC---GLLASTGTFFAILATPCLPLLAIFDTSRYPITHQSCADAFFCGATVATCCYTLLFCILQGAYPDHRGLELSCRVKVAVLFAFLVGFLLYLPVGIPLACPARLLSVAECIEDEHLAESYCYGNIYPANDMYTILYTYRDCPGVYTMRTLAQTVCVFSILLYTLTFCLDLGPEMRKLRQSPL 964
+ + P+ G+ T+ C + ++ Y+G IPWP+ SDTGR+ +Y +F G+ + A A + L T+ + + AG L PGGC A T L++ L LLA F T YP HQ A AFF V T R + + + + F V ++YLP+G+ + C LSV +C+ + L E+YC P + T L+ Y CP TMR+++Q +CV +ILL+ TF +DL + + L
Sbjct: 2 VAHLVPVLAIVTGVSTFAICVGAVLADNIYVGGIPWPYLSDTGREGTSYTIFAVGLSVTAVLIAASDVLYWHATYGEDASEVSVAGALKLALGCPSPGGCCSPSATALVATKLFCLSSVALTLLACFSTIVYPDVHQYSAYAFFLLQVVGIALLTSASNRPAARREMTRSVRRATLARNVLAAIFFVAVVIYLPIGLAVNCEWSRLSVDDCVRTQRLGEAYCEARRLPGDSSQTTLWDYSGCPRTNTMRSVSQFICVIAILLFHGTFTIDLRRDAESISDEDL 284
BLAST of mRNA_S-ischiensis_contig12.2759.1 vs. uniprot
Match: W4FH42_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FH42_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.030e-32 Identity = 87/259 (33.59%), Postives = 127/259 (49.03%), Query Frame = 2
Query: 143 LVRVAPLCGFFIGIVTYTACRAIAVVEDTYLGDIPWPFFSDTGRDRPAYYVFVAGMLLGAPCYAMTFYLIHRRTHQWLGQAGAAGGEALLPGGCGLLASTGTFFAILATPCLPLLAIFDTSR-YPITHQSCADAFFCGATVATCCYTLLFCILQGAYPDHRGLELSCRVKVAVLFAFLVGFLLYLPVGIPLACPARLLSVAECIEDEHLAESYCYGNIYPANDMYTILYTYRDCPGVYTMRTLAQTVCVFSILLYTLTF 916
L R +P+ F + T C I +D Y+G + WP+FSD GRD PAYYVF G+ L A A+T+ R L A +LL C AST +AT LP+L+I+ S +P H A FF A T + + P + + R++V FL+ F+LY+PVG+ + CP L+V +C+ E L YC I + YT LY Y +C + +R+ AQ VC+ +++ Y L+F
Sbjct: 8 LRRWSPILAPFFTVTTLIICIVITKTKDIYVGSLAWPYFSDMGRDDPAYYVFATGLCLTAIFLALTWTFNFRHQATVLAHPEAKATPSLLR--CSFAAST---MGAVATIGLPILSIYRVSYDHPEIHNYAAYFFFVFQAAAVFLNTYVTRRILHTSPTPKIFRTTWRIQVVFASLFLIAFILYIPVGLAIVCPFERLTVVKCLT-EGLGTDYCATTI-GFDATYTKLYDYSNCGAINQLRSAAQLVCILTLVGYALSF 259
BLAST of mRNA_S-ischiensis_contig12.2759.1 vs. uniprot
Match: A0A024UIR7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UIR7_9STRA) HSP 1 Score: 130 bits (328), Expect = 6.270e-32 Identity = 87/269 (32.34%), Postives = 132/269 (49.07%), Query Frame = 2
Query: 134 AGGLVRVAPLCGFFIGIVTYTACRAIAVVEDTYLGDIPWPFFSDTGRDRPAYYVFVAGMLLGAPCYAMTFYLIHRRTHQWLGQAGAAGGEALLPGGCGLLASTGTFFAILATPCLPLLAIFDTSR-YPITHQSCADAFF---CGATVATCCYTLLFCILQGAYPDHR----GLELSCRVKVAVLFAFLVGFLLYLPVGIPLACPARLLSVAECIEDEHLAESYCYGNIYPANDMYTILYTYRDCPGVYTMRTLAQTVCVFSILLYTLTF 916
A L R +P+ F + T C I +D Y+G + WP+FSD GRD PAYYVF G+ L A A+T+ ++ L Q + AL C AS +AT LP+L+I+ S +P H A FF A + T +L + P GL + R+++ FLV F+LY+PVG+ + C L++ +C+ E L YC + +D YT LY Y +C G+ +R+ +Q VC+ +++ Y L+F
Sbjct: 5 AAALRRWSPILAPFFTVATLIICIVITKTKDIYVGSLAWPYFSDMGRDDPAYYVFATGLCLTALFLALTWIFNYQHQIDMLTQPNSKATPALSR--CSFAASA---MGAVATIGLPILSIYRVSYDHPEIHNYAAYFFFIFQAAAVLLNTYVTRRILVLATSSPHGTFPVGGLRTTWRIQLVFALCFLVAFVLYIPVGLAIVCSFERLTIVKCLS-EGLGADYCTTTM-RFDDTYTKLYDYSNCGGINQLRSASQLVCILTLVGYALSF 266
BLAST of mRNA_S-ischiensis_contig12.2759.1 vs. uniprot
Match: A0A2R5GL89_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GL89_9STRA) HSP 1 Score: 133 bits (334), Expect = 6.230e-31 Identity = 86/258 (33.33%), Postives = 125/258 (48.45%), Query Frame = 2
Query: 185 VTYTACRAIAVVEDTYLGDIPWPFFSDTGRDRPAYYVFVAGMLLGAPCY----AMTFYLIHRRTHQWLGQAGAAGGEALLPGGCGLLASTGTFFAILATPCLPLLAIFDTSRYPITHQSCADAFFCGATVATCCYTLLFC-ILQGAYPDHRGLELSCRV--KVAVLFAFLVGFLLYLPVGIPLACPARLLSVAECIEDEHLAESYCYGNIYPANDMYTILYTYRDCPGVYTMRTLAQTVCVFSILLYTLTFCLDLGPE 937
++Y C AIA+ DTY+G + +P+FSDTGRD+PAYY+F + + C M +Y + QA GGE C + T T F +A LL+IFDT Y H A FF + C +++ C L +P+ G C + + V+ VGF+ Y+PVG+ LAC L + +CI E YC IY +N T L+ Y +C V MR + Q + + S+L Y + LD P+
Sbjct: 33 ISYVTCIAIAIASDTYIGGLSFPYFSDTGRDKPAYYIFATLNTVASVCMFPFMIMQYYYV---------QAWVPGGEVK----CRNI--TATIFGCIAPIGSILLSIFDTGNYSALHSYSAYVFFI-LIILHCSFSIAICRFLAARFPETHG---GCLIISRYIVMATLTVGFIGYIPVGLALACEWTRLPLDDCITIVG-DEEYCTDKIYESNATLTTLFAYDNCTEVNDMRAVTQFISIVSLLAYIFLYALDPAPQ 270
BLAST of mRNA_S-ischiensis_contig12.2759.1 vs. uniprot
Match: A0A6G0WJG8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJG8_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.840e-27 Identity = 87/266 (32.71%), Postives = 127/266 (47.74%), Query Frame = 2
Query: 158 PLCGFFIGIVTYTACRAIAVVEDTYLGDIPWPFFSDTGRDRPAYYVFVAGMLLGAPCYAMTFYLIHRRTHQWLGQAGAAGGEAL---LPGGCGLLASTGTFFAILATPCLPLLAIFDTSR-YPITHQSCADAFFCGATVATCCYT-----LLFCILQGAYPDHRGLELSC----RVKVAVLFAFLVGFLLYLPVGIPLACPARLLSVAECIEDEHLAESYCYGNIYPANDMYTILYTYRDCPGVYTMRTLAQTVCVFSILLYTLTF 916
P+ F +VT C AIA +D Y+G + WP+FSD GRD PAYYVFV G+ L A +T++ W QA A P + + +++T LP+L+I+ S +P H A FF A T +L I + A L +S RV++A FLV F+LY+PVG+ L C L+ A+CI D +L YC + + T LY Y +C + MR AQ C+ +++ Y ++F
Sbjct: 10 PILAPFFTVVTLITCFAIAKAKDIYVGSLSWPYFSDMGRDDPAYYVFVVGLCLTAIFLLLTWWF------NWHFQASVLSHSAAKQTAPPSLSRCNTAASIMGMISTIGLPILSIYRVSYPHPEVHNYAAYFFFVFQAAAVLLNTYVSRRILTIISENASQVPTRLLVSIQRAWRVQIAFASIFLVAFILYIPVGLALVCEFARLTQAKCI-DLNLGVEYCTVTV-RLDATNTKLYDYSNCYSINQMRAGAQLACILTLVGYAVSF 267
BLAST of mRNA_S-ischiensis_contig12.2759.1 vs. uniprot
Match: A0A485LH19_9STRA (Aste57867_21233 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LH19_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.950e-24 Identity = 85/280 (30.36%), Postives = 122/280 (43.57%), Query Frame = 2
Query: 158 PLCGFFIGIVTYTACRAIAVVEDTYLGDIPWPFFSDTGR-----------------DRPAYYVFVAGMLLGAPCYAMTFYLIHRRTHQWLGQAGAAGGEALLPGGCGLLASTGTFFAILATPCLPLLAIFDTS-RYPITHQSCADAFFCGATVATCCYTL----LFCILQGAYPDHRGLELSC-----RVKVAVLFAFLVGFLLYLPVGIPLACPARLLSVAECIEDEHLAESYCYGNIYPANDMYTILYTYRDCPGVYTMRTLAQTVCVFSILLYTLTF 916
P+ F I T C I V DTY+G + WP+FSD GR D PA YVF G+ L A A+T++ + L G + C L +++T LP+L+I+ S +P H A FF A T L I Q D +L R ++A AF + FLLY+PVG+ + C L++ +CIE+ L YC I +D+ T LY Y +C G+ MR AQ C+ +++ Y +F
Sbjct: 13 PILAPFFTIATLITCIIITKVNDTYVGTLSWPYFSDMGRGMFFLVSSSRVLTTSPPDVPAAYVFAIGLCLTAIFLALTWFFNYTYQKTVLAHPSTKGASSAALPRCSLAVC---IMGMISTIGLPILSIYRVSFAHPEIHNYAAYFFFVFQAAAVLLNTYVTRRLLVIHQSLDADAPPFKLDSLRRAWRFQIAFAVAFSIAFLLYIPVGLAIVCDWARLTIQKCIENG-LGVDYCQQTI-RLDDVNTKLYDYGNCWGINQMRAAAQLACILTLVGYAFSF 287
BLAST of mRNA_S-ischiensis_contig12.2759.1 vs. uniprot
Match: A0A5D6YA92_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YA92_9STRA) HSP 1 Score: 107 bits (267), Expect = 4.450e-23 Identity = 85/278 (30.58%), Postives = 122/278 (43.88%), Query Frame = 2
Query: 143 LVRVAPLCGFFIGIVTYTACRAIAVVEDTYLGDIPWPFFSDTGRDRPAYYVFVAGMLLGAPCYAMTFYL-----------------IHRRTHQWLGQAGAAGGEALLPGGCGLLASTGTFFAILATPCLPLLAIFDTSRYPITHQSCADAFFCGATVATCCYTLLFCILQGAYPDHRGLELSCRV-KVAVLFA--FLVGFLLYLPVGIPLACPARLLSVAECIEDEHLAESYCYGNIYPANDMYTILYTYRDCPGVYTMRTLAQTVCVFSILLYTLTF 916
L +AP + +VT C I + Y G + WP+FSD GRD PAYYVF G+ L A A T+ I RRT +W A+T + + LP+LA F TS YP H + A FF TVA L + D E R ++ ++FA F V FL+YLP+G+ + + L++AEC+E + L YC + N T L+ Y D +R AQ C+ +++ Y+L+F
Sbjct: 8 LRALAPTVASGVVVVTLVTCLIITKSKHIYTGGLKWPYFSDMGRDAPAYYVFCVGLSLAAVMLACTWAFNYQFQRAVLSRPIQLGEIKRRTLRW--------------------ATTCAVLGMASVVGLPVLAFFSTSSYPSLHNNAAYWFFLLETVAVLTNLLPAGSTAPSVDDTERFERLRRTSRIQLVFAGLFFVAFLIYLPIGLAIIDDFKHLTIAECLERD-LGTEYCTVTM-KRNATETKLWNYEDDFTRSQLRAGAQLGCILTLVGYSLSF 263
BLAST of mRNA_S-ischiensis_contig12.2759.1 vs. uniprot
Match: A0A7S3PPA4_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PPA4_9STRA) HSP 1 Score: 106 bits (264), Expect = 7.770e-23 Identity = 77/274 (28.10%), Postives = 119/274 (43.43%), Query Frame = 2
Query: 182 IVTYTACRAIAVVEDTYLGDIPWPFFSDTGRDRPAYYVFVAGMLLGAPCYAMTFYLI-HRRTHQWLGQAGAAGGEALLPGGCGLLASTGTFFAILATPCLPLLAIFDTSRYPITHQSCADAFFCGATVATCCYTLLFCILQGAYPDHRGLELSCRVKVAVLFAFLVGFLLYLPVGIPLACPARLLSVAECIEDEHLAESYCYGNIYPANDMYTILYTYRDCPGVYTMRTLAQTVCVFSILLYTLTFCLDLGPEMRKLRQSPLSGSDYVSEPFGN 1000
IV+Y C +AV D Y+G + +P+FSDTGR+ P YYVF A + A + F ++ ++ W A T T F +A +L++ ++ H A FF + ++ L Y + + ++ RV VA LF + FLLYLP+G+ + CP LS+ +CI E L YC P N T+LY Y C +R+ Q +F ++++ + D P P SG+ F N
Sbjct: 20 IVSYVVCIGLAVGTDVYIGGLKFPYFSDTGREAPGYYVF-ASLNSVASILLLGFVILQYKFVKAWTDDAKCRN-------------VTATVFGAIAPVFSIILSVVSSNTNDDVHFYSAILFFVCMVLHLGFSMTIYWYLNSVYDAFKSMHVA-RVVVAALF--FISFLLYLPIGLAINCPFENLSLDDCINQEDLGVEYCTDLKDPDNVTLTVLYDYSPCVDTNHLRSATQFCSIFFLMVWIIISAFDPTP--------PTSGTGDERVKFDN 268
BLAST of mRNA_S-ischiensis_contig12.2759.1 vs. uniprot
Match: W4FHG0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FHG0_9STRA) HSP 1 Score: 101 bits (252), Expect = 5.840e-21 Identity = 67/202 (33.17%), Postives = 96/202 (47.52%), Query Frame = 2
Query: 143 LVRVAPLCGFFIGIVTYTACRAIAVVEDTYLGDIPWPFFSDTGRDRPAYYVFVAGMLLGAPCYAMTFYLIHRRTHQWLGQAGAAGGEALLPGGCGLLASTGTFFAILATPCLPLLAIFDTSR-YPITHQSCADAFFCGATVATCCYTLLFCILQGAYPDHRGLELSCRVKVAVLFAFLVGFLLYLPVGIPLACPARLLSVAE 745
L R +P+ F + T C I +D Y+G + WP+FSD GRD PAYYVF G+ L A A+T+ R L A +LL C AST +AT LP+L+I+ S +P H A FF A T + + P + + R++V FL+ F+LY+PVG+ + CP L+V +
Sbjct: 8 LRRWSPILAPFFTVTTLIICIVITKTKDIYVGSLAWPYFSDMGRDDPAYYVFATGLCLTAIFLALTWTFNFRHQATVLAHPEAKATPSLLR--CSFAAST---MGAVATIGLPILSIYRVSYDHPEIHNYAAYFFFVFQAAAVFLNTYVTRRILHTSPTPKIFRTTWRIQVVFASLFLIAFILYIPVGLAIVCPFERLTVVK 204 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig12.2759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig12.2759.1 >prot_S-ischiensis_contig12.2759.1 ID=prot_S-ischiensis_contig12.2759.1|Name=mRNA_S-ischiensis_contig12.2759.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=340bp MPVPSYDAVDTAPVAVAAAGYGYGKAGGLVRVAPLCGFFIGIVTYTACRAback to top mRNA from alignment at S-ischiensis_contig12:3039212..3047676- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig12.2759.1 ID=mRNA_S-ischiensis_contig12.2759.1|Name=mRNA_S-ischiensis_contig12.2759.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8465bp|location=Sequence derived from alignment at S-ischiensis_contig12:3039212..3047676- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig12:3039212..3047676- >mRNA_S-ischiensis_contig12.2759.1 ID=mRNA_S-ischiensis_contig12.2759.1|Name=mRNA_S-ischiensis_contig12.2759.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2040bp|location=Sequence derived from alignment at S-ischiensis_contig12:3039212..3047676- (Schizocladia ischiensis KU_0333)back to top |