mRNA_S-ischiensis_contig12.2716.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig12.2716.1 vs. uniprot
Match: D8LFM8_ECTSI (Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM8_ECTSI) HSP 1 Score: 411 bits (1057), Expect = 1.410e-137 Identity = 227/403 (56.33%), Postives = 269/403 (66.75%), Query Frame = 1
Query: 7 PEEFLEDEV------FSVGDDEAGLRLDSFLVERVPGQSRTYFGGLCAQGLVRVGGARVKKGWRVEEGQEVEVKFTVPPELSLEPEDIPLEVIYEDEYLIAVSKPAGMVVHPAPGNWKGTFVNALLHHLRGRGEGRAFQGAGNPSEGVDGDEDEALQGVSSG-----LRPGVVHRLDKGTTGVLLAAKDPATQARLGQLFADRRVRKTYLAVCVGNPGEGVVVDVPIGRHPVHRQRMVAVPNDGFSEVQPQVHARKALSRVETRAFDGRLSVVEVEIETGRTHQIRVHLQHRRTPVLGDDIYGNRDWNRRLLNQQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYPDVAEGRPLLHAWSLELEHPSTGEMLRLRAPLPPDLESVVRGIYPAVGEERPEWL 1182
PEE +E+E+ +V + E G RLDSFL R+P QSR+YFGGLC G+V VGG KK +VEEGQEVEV+F + PELSL+ EDIPL+++YED+ +IAVSKPAGMVVHPAPG+W GTFVNAL+ HL GA GV + A Q V G LRPG+VHRLDKGTTGVLLAAK+P QA+L +LFA RR+ K+YLAVCVGNPG+ +DVPIGRHP RQRMVAVP +QP + +R+ALS V T AFDG+LSV EV IETGRTHQIRVHLQHRRTPVLGD++YGN DWNRRL RPLLHA SLE +HP+TGE++ L APLP D+E+VVR IYP V +E PEWL
Sbjct: 91 PEEEVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKTAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLE-------KSGADGNGLGV---AEAAFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPT-----IQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLT------------------------------------RPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWL 442
BLAST of mRNA_S-ischiensis_contig12.2716.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA) HSP 1 Score: 377 bits (967), Expect = 4.280e-125 Identity = 211/396 (53.28%), Postives = 247/396 (62.37%), Query Frame = 1
Query: 1 AQPEEFLEDEVFSVGDDEAGLRLDSFLVERVPGQSRTYFGGLCAQGLVRVGGAR-VKKGWRVEEGQEVEVKFTVPPELSLEPEDIPLEVIYEDEYLIAVSKPAGMVVHPAPGNWKGTFVNALLHHLRGRGEGRAFQGAGNPSEGVDGDEDEALQGVSSGLRPGVVHRLDKGTTGVLLAAKDPATQARLGQLFADRRVRKTYLAVCVGNPGEGVVVDVPIGRHPVHRQRMVAVPNDGFSEVQPQVHARKALSRVETRAFDGRLSVVEVEIETGRTHQIRVHLQHRRTPVLGDDIYGNRDWNRRLLNQQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYPDVAEGRPLLHAWSLELEHPSTGEMLRLRAPLPPDLESVVRGIYPAVGEERPEWLG 1185
A +E + VF +AG R+D+FL +VP QSRTYFG LC +G V V G+ VKK +V GQ + V+F EL+L PEDIPL+VI+ED L+A++KP GMVVHPAPGNW GTFVNALLHHL G + G S LRPGVVHRLDKGT+GVLLAAK P Q +L QLF DR+VRKTYLAVC GNPG+ + DVPIGRH +RQ+MVAVP ++QP AR+ALS V AFDG LSV EV IETGRTHQIRVHLQHRRTP++GD++YGNRDWNRRL QK RPLLHA LE HP+TG LRL APLP D+ S+VRG+YP EE P W G
Sbjct: 45 ADEDEIFDVSVFEADLADAGQRIDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFLATAELNLGPEDIPLDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDGSVVSL-------------------GESGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPGDDAI-DVPIGRHATNRQKMVAVP-----DIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRL---QKRGI----------------------------------SRPLLHALRLEFTHPTTGAALRLEAPLPEDMASIVRGVYPVAIEEHPGWFG 378
BLAST of mRNA_S-ischiensis_contig12.2716.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK) HSP 1 Score: 341 bits (874), Expect = 4.460e-111 Identity = 185/388 (47.68%), Postives = 241/388 (62.11%), Query Frame = 1
Query: 19 LEDEVFSVGDDEAGLRLDSFLVERVPGQSRTYFGGLCAQGLVRVGGARVKKGWRVEEGQEVEVKFTVPPELSLEPEDIPLEVIYEDEYLIAVSKPAGMVVHPAPGNWKGTFVNALLHHLRGRGEGRAFQGAGNPSEGVDGDEDEALQGVSSGLRPGVVHRLDKGTTGVLLAAKDPATQARLGQLFADRRVRKTYLAVCVGNPGEGVVVDVPIGRHPVHRQRMVAVPNDGFSEVQPQVHARKALSRVETRAFDGRLSVVEVEIETGRTHQIRVHLQHRRTPVLGDDIYGNRDWNRRLLNQQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYPDVAEGRPLLHAWSLELEHPSTGEMLRLRAPLPPDLESVVRGIYPAVGEERPEWL 1182
L++E VG++ RLD+FL + P QSR+YFG LC QGLVRVGG VKK ++ GQEV V F E++ EPEDIPL+++YEDE+LIAV+KP GMVVHPAPG+W GTF NAL H+R RGE G G+ LRPG+VHRLDKGT+GVLLA+K+ A+L ++FA R+++KTYLAVCVGNPG+ V ++ I RHP +RQ+M + + AR A++ V+ +FD +LS+ V+IETGRTHQIRVHL HRRTPVLGD++YGN D NRR + + RPLLHA+ LEL+HP TGE L L+AP+P D+ V+ IYP V +E+P+ L
Sbjct: 64 LQEETVIVGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAFLPTAEMAAEPEDIPLDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGEDYRAAGGGDA------------------LRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVI----HETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKR------------------------------------FGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDMVRVLAKIYPQVEDEQPDML 393
BLAST of mRNA_S-ischiensis_contig12.2716.1 vs. uniprot
Match: A0A4D9DAN8_9STRA (PseudoU_synth_2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAN8_9STRA) HSP 1 Score: 288 bits (737), Expect = 3.610e-89 Identity = 189/432 (43.75%), Postives = 231/432 (53.47%), Query Frame = 1
Query: 31 VFSVGDDEAGLRLDSFLVERVPGQSRTYFGGLCAQGLVRVGGARVKKGWRVEEGQEVEVKFTVPPE--LSLEPEDIPLEVIYEDEYLIAVSKPAGMVVHPAPGNWKGTFVNALLHHLRGRGEGRAFQGAGNPSEGVDGDEDEALQGVSSGLRPGVVHRLDKGTTGVLLAAKDPATQARLGQLFADRRVRKTYLAVCVGNPG-EGVVVDVPIGRHPVHRQRMV---------------------AVPN-DGFSEVQPQVH-----------------------ARKALSRVETRAFDGRLSVVEVEIETGRTHQIRVHLQHRRTPVLGDDIYGNRDWNRRLLNQQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYPDVAEGRPLLHAWSLELEHPSTGEMLRLRAPLPPDLESVVRGIYPAV-GEERPEW 1179
+F E+ +R+D FL +R+ G SR+ L +G V V G+ +K ++ EG E+ V E +E EDIPL+V+YEDE++IAV+K GMVVHPAPGN GTFVNALL H+ RG G+ +E V S RPGVVHRLDKGT+GVLLAAK A L FA+RRV KTYLA+ +GNP +G V+DVPIGRHP RQRM AV N DG+SE ++ RKA S V+T AFDGRLSVVEV IETGRTHQIRVHLQHRR PVLGD++YGN WN R + RP+LHA L ++HP TG+ LRL AP+PPD+ SV GI+P V G E EW
Sbjct: 85 IFVANTSESLIRVDRFLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVLQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRG----------------GEIEEV---VGSEGRPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASNAQDAVLNYDGYSEDYQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVT------------------------------------RPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEW 461
BLAST of mRNA_S-ischiensis_contig12.2716.1 vs. uniprot
Match: A0A7S4JE35_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JE35_9STRA) HSP 1 Score: 288 bits (736), Expect = 6.500e-89 Identity = 181/412 (43.93%), Postives = 222/412 (53.88%), Query Frame = 1
Query: 58 GLRLDSFLVERVPGQSRTYFGGLCAQGLVRVGGAR---------VKKGWRVEEGQEVEVKFTVPPELSLE--PEDIPLEVIYEDEYLIAVSKPAGMVVHPAPGNWKGTFVNALLHHLRGRGEGRAFQGAGN---PSEGVDGDED---------EALQGVSSGLRPGVVHRLDKGTTGVLLAAKDPATQARLGQLFADRRVRKTYLAVCVGNPGEGVVVDVPIGRHPVHRQRMVAVPNDGFSEV------------QPQVHARKALSRVETRAFDGRLSVVEVEIETGRTHQIRVHLQHRRTPVLGDDIYGNRDWNRRLLNQQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYPDVAEGRPLLHAWSLELEHPSTGEMLRLRAPLPPDLESVVRGIYPAVGEERPEWLGG 1188
G R+D+ L P SR+ G L + GLV V G +K +V G + V+ +P E E P+DIPL+V++EDE++I ++K AGMVVHPA GNW GT VNAL H+L + GAG+ P G +E+ E G + RPGVVHRLDKGTTGVL+ AK A L + FA RR +K Y+ V VGNPG+ V +D PIGRHP HRQRM VP ++ P R+ALS V+T AFDGRLSV EV IETGRTHQIRVHLQ RRTPV GDD+YG DWN+RL RPLLHA LE++HP TGE L RAPL D+ +V GI+P EERP+ GG
Sbjct: 150 GSRIDAALGALDPDLSRSLCGTLVSDGLVSVAGVSGGDGTPEVVTRKSHKVSGGDVLAVR-RIPDETPEEIVPQDIPLDVLFEDEHMIVLNKAAGMVVHPAAGNWDGTVVNALAHYLAKV----SSHGAGDFVLPEGGTTAEEEDGALGAVLVEGTDGEAQKFRPGVVHRLDKGTTGVLVVAKTREALAALSESFAQRRAKKAYVTVTVGNPGKRVTIDRPIGRHPTHRQRMRVVPEPSRKDLIGRRPAPGAPPRTPSQAGRRALSFVDTLAFDGRLSVAEVRIETGRTHQIRVHLQDRRTPVYGDDVYGLPDWNKRLAKTHSVE------------------------------------RPLLHAAKLEIDHPVTGERLTFRAPLAQDMAKIVDGIWPQGREERPDLFGG 520
BLAST of mRNA_S-ischiensis_contig12.2716.1 vs. uniprot
Match: A0A212KRQ0_9CHLA (Pseudouridine synthase n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KRQ0_9CHLA) HSP 1 Score: 277 bits (708), Expect = 3.300e-87 Identity = 164/365 (44.93%), Postives = 210/365 (57.53%), Query Frame = 1
Query: 34 FSVGDDEAGLRLDSFLVERVPGQ-SRTYFGGLCAQGLVRVGGARVKKGWRVEEGQEVEVKFTVPPELSLEPEDIPLEVIYEDEYLIAVSKPAGMVVHPAPGNWKGTFVNALLHHLRGRGEGRAFQGAGNPSEGVDGDEDEALQGVSSGLRPGVVHRLDKGTTGVLLAAKDPATQARLGQLFADRRVRKTYLAVCVGNPGEGVVVDVPIGRHPVHRQRMVAVPNDGFSEVQPQVHARKALSRVETRAFDGRLSVVEVEIETGRTHQIRVHLQHRRTPVLGDDIYGNRDWNRRLLNQQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYPDVAEGRPLLHAWSLELEHPSTGEMLRLRAPLPPDL 1125
F V D EAG RLD L +R GQ SR+YF L LV + G VKK R E G EVEV+F + PE++L PE++PLEV+YED++LI ++K AGMVVHPAPGNW GTFVNALL+H G +FQ + LRPG+VHRLDK T+G L+AAK+ Q RL +LF+ R++ K Y+AVCVGNPG+G V DVPIGRHPVHR++M + + G R A++ T A RLSVV++ +ETGRTHQIRVHL+HR P+LGD +YG NR+ + R +LHA+ L HP TGE L + AP+P D+
Sbjct: 24 FVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGRPVKKQVRPESGDEVEVEFALTPEVNLHPENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHC-----GDSFQ-------------------AEASLRPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNPGDGTV-DVPIGRHPVHRKQMAVIESGG----------RHAVTHYSTLAHKDRLSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMNRQY----------------------------------------SASRQMLHAYRLRFMHPITGEKLDVMAPIPVDM 313
BLAST of mRNA_S-ischiensis_contig12.2716.1 vs. uniprot
Match: A0A1Z5KSD1_FISSO (Pseudouridine synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSD1_FISSO) HSP 1 Score: 277 bits (708), Expect = 3.090e-85 Identity = 166/386 (43.01%), Postives = 231/386 (59.84%), Query Frame = 1
Query: 64 RLDSFLVERVPGQSRTYFGGLCAQGLVRVGGARV---KKGWRVEEGQEVEVKFT-----VPPELSLEPEDIPLEVIYEDEYLIAVSKPAGMVVHPAPGNWKGTFVNALLHHLR----GRGEGRAFQGAGNPSEGVDGDEDEALQGVSSGLRPGVVHRLDKGTTGVLLAAKDPATQARLGQLFADRRVRKTYLAVCVGNPGEGVVVDVPIGRHPVHRQRMVAVPN------DGFSE----VQPQVHA-RKALSRVETRAFDGRLSVVEVEIETGRTHQIRVHLQHRRTPVLGDDIYGNRDWNRRLLNQQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYPDVAEGRPLLHAWSLELEHPSTGEMLRLRAPLPPDLESVVRGIYP 1152
R+D+ L + +SR+ G L +G V+ G KK ++V+EGQ + + + VP ++ L PE+IPL+++YEDE++I ++K AGMVVHPA GNW+GT VNAL+++L G GE F G+ + + ++ E + RPG+VHRLDKGTTGVL+ AK+ L + FA+R+V+KTYLA+ VGNPG+ V +D PI RHP+HRQRM VP+ G + +QPQ + R+ALS V+T AFDG+LSVV+V+I TGRTHQIRVHLQ R TP+ GDD+YG +DWN RL Q+ RPLLHA+ L++EHP TG+++ RAPL D+ V + I P
Sbjct: 124 RIDAALAACLANESRSVCGSLVTEGCVQDGVTHEVLNKKSYKVQEGQTLRIDLSQRENKVPTDI-LVPENIPLDILYEDEHMIVLNKAAGMVVHPAAGNWRGTVVNALVYYLPNSPYGSGE---FVTNGSMAANSNNEDGEPVL-----FRPGIVHRLDKGTTGVLVVAKNSHALTSLSEAFANRQVQKTYLAITVGNPGKQVTIDKPIARHPIHRQRMRVVPDPHQRDSSGMAPKDRLLQPQSSSGRRALSFVDTLAFDGQLSVVQVQIATGRTHQIRVHLQDRHTPIYGDDVYGLKDWNDRLFKTQQI-----------------------------------RDRPLLHAYKLQIEHPVTGQVMEFRAPLAEDMFRVAKTICP 465
BLAST of mRNA_S-ischiensis_contig12.2716.1 vs. uniprot
Match: A0A7S4T6Y3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T6Y3_9STRA) HSP 1 Score: 272 bits (695), Expect = 6.120e-85 Identity = 162/365 (44.38%), Postives = 210/365 (57.53%), Query Frame = 1
Query: 166 KKGWRVEEGQEVEVK--FTVPPELSLE--PEDIPLEVIYEDEYLIAVSKPAGMVVHPAPGNWKGTFVNALLHHLR-----GRGEGRAFQGAGNPSEGVDGDEDEALQ-------GVSSGLRPGVVHRLDKGTTGVLLAAKDPATQARLGQLFADRRVRKTYLAVCVGNPGEGVVVDVPIGRHPVHRQRMVAVP---NDGFSEVQPQVH----------ARKALSRVETRAFDGRLSVVEVEIETGRTHQIRVHLQHRRTPVLGDDIYGNRDWNRRLLNQQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYPDVAEGRPLLHAWSLELEHPSTGEMLRLRAPLPPDLESVVRGIYPAVGEERP 1173
+K ++VE G E+ ++ F E + PEDIPL +IYEDE +I ++K A MVVHPA GNW+GT VNAL H+L G GE + + G E + E++ ++ ++ LRPG+VHRLDKGTTGVL+ AK A L + FADR V+KTY+A+ VGNPG GVV+D PIGRHP HRQRM VP N+ + + +V R+ALSRV+T AFDG+LSVV+V IETGRTHQIRVHLQ RRTP+ GDD+YG DWN+RL + RPLLHA LE++HP+TGE + APL D+ I+P E+P
Sbjct: 17 RKSYKVEAGSEIHLQQDFNEDHETPTKIIPEDIPLNIIYEDEDIIVLNKAADMVVHPAAGNWEGTVVNALAHYLTQVSPFGSGEFVSLEEGGAEIESLGDHEEDEIEVEGTDGEAAATFLRPGIVHRLDKGTTGVLMVAKTKQALAELSKSFADRTVKKTYIAITVGNPGRGVVIDKPIGRHPKHRQRMRVVPDHRNNAYGGRKSKVSNSGSMSLSQMGRRALSRVDTLAFDGKLSVVQVNIETGRTHQIRVHLQDRRTPIYGDDVYGLPDWNKRLSKTRNV------------------------------------NRPLLHAHRLEIDHPTTGERIVFTAPLADDMIQTADTIWPDGRLEQP 345
BLAST of mRNA_S-ischiensis_contig12.2716.1 vs. uniprot
Match: A0A2E3M0J3_9BACT (Pseudouridine synthase n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3M0J3_9BACT) HSP 1 Score: 270 bits (690), Expect = 8.330e-85 Identity = 156/373 (41.82%), Postives = 211/373 (56.57%), Query Frame = 1
Query: 34 FSVGDDEAGLRLDSFLVERVPGQSRTYFGGLCAQGLVRVGGARVKKGWRVEEGQEVEVKFTVPPELSLEPEDIPLEVIYEDEYLIAVSKPAGMVVHPAPGNWKGTFVNALLHHLRGRGEGRAFQGAGNPSEGVDGDEDEALQGVSSGLRPGVVHRLDKGTTGVLLAAKDPATQARLGQLFADRRVRKTYLAVCVGNPGEGVVVDVPIGRHPVHRQRMVAVPNDGFSEVQPQVHARKALSRVETRAFDGRLSVVEVEIETGRTHQIRVHLQHRRTPVLGDDIYGNRDWNRRL-LNQQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYPDVAEGRPLLHAWSLELEHPSTGEMLRLRAPLPPDLESVVRGIY 1149
F V ++EAG RLD L +R QSRTYF L + LV V G V+K ++ EVEV+F + PELSLEPEDIPL+++YEDEYL+A++KPAG+VVHP GNW GTF NALL+H + + LRPG+VHRLDK T+G+LLAAK +Q L +LF+ R++ K Y A+C+GNPG G + + PIGRHP+HR++M + + R A + ET AF+G+LS+V++ +ETGRTHQIRVH+ H TP+LGD+ YG + N++ +N+Q LLHA LELEHP T + L+L A LP D + I+
Sbjct: 9 FFVTEEEAGERLDKVLSKRYTEQSRTYFQYLITEKLVLVNGEPVRKRTALQTNDEVEVEFILSPELSLEPEDIPLDIVYEDEYLLAINKPAGLVVHPGAGNWSGTFANALLYHCK------------------------QVPDAGDQLRPGIVHRLDKDTSGLLLAAKTNMSQQALVELFSSRKIYKEYWAICLGNPGNGRI-EAPIGRHPIHRKKMAVIES-----------GRSASTIYETIAFNGKLSLVKLILETGRTHQIRVHMLHLGTPILGDETYGRKQMNQKYKINRQ-----------------------------------------LLHAKHLELEHPITKKNLKLEASLPEDFSKITEQIH 304
BLAST of mRNA_S-ischiensis_contig12.2716.1 vs. uniprot
Match: A0A7S1Z3B5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z3B5_9STRA) HSP 1 Score: 275 bits (702), Expect = 7.180e-84 Identity = 175/407 (43.00%), Postives = 228/407 (56.02%), Query Frame = 1
Query: 64 RLDSFLVERV-PGQSRTYFGGLCAQGLVRV--GGAR-----VKKGWRVEEGQEVEVK--FTVPPELSLE--PEDIPLEVIYEDEYLIAVSKPAGMVVHPAPGNWKGTFVNALLHHLR-----GRGEGRAFQGAGNPSEGVDGDEDEALQ-------GVSSGLRPGVVHRLDKGTTGVLLAAKDPATQARLGQLFADRRVRKTYLAVCVGNPGEGVVVDVPIGRHPVHRQRMVAVP---NDGFSEVQPQVH----------ARKALSRVETRAFDGRLSVVEVEIETGRTHQIRVHLQHRRTPVLGDDIYGNRDWNRRLLNQQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYPDVAEGRPLLHAWSLELEHPSTGEMLRLRAPLPPDLESVVRGIYPAVGEERP 1173
R+D+ L + P SR+ G L G+V V GA +K ++VE G E+ ++ F E + PEDIPL +IYEDE +I ++K A MVVHPA GNW+GT VNAL H+L G GE + + G E + E++ ++ ++ LRPG+VHRLDKGTTGVL+ AK A L + FADR V+KTY+A+ VGNPG GVV+D PIGRHP HRQRM VP N+ + + +V R+ALSRV+T AFDG+LSVV+V IETGRTHQIRVHLQ RRTP+ GDD+YG DWN+RL + RPLLHA LE++HP+TGE + APL D+ I+P E+P
Sbjct: 144 RIDAALSSLLEPPISRSRCGTLVTNGIVSVLEKGAEEPVVMTRKSYKVEAGSEIHLQQDFNEDHETPTKIIPEDIPLNIIYEDEDIIVLNKAADMVVHPAAGNWEGTVVNALAHYLTQVSPFGSGEFVSLEEGGAEIESLGDHEEDEIEVEGTDGEAAATFLRPGIVHRLDKGTTGVLMVAKTKQALAELSKSFADRTVKKTYIAITVGNPGRGVVIDKPIGRHPKHRQRMRVVPDHRNNAYGGRKSKVSNSGSMSLSQMGRRALSRVDTLAFDGKLSVVQVNIETGRTHQIRVHLQDRRTPIYGDDVYGLPDWNKRLSKTRNV------------------------------------NRPLLHAHRLEIDHPTTGERMVFTAPLADDMIQTADTIWPDGRLEQP 514 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig12.2716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig12.2716.1 >prot_S-ischiensis_contig12.2716.1 ID=prot_S-ischiensis_contig12.2716.1|Name=mRNA_S-ischiensis_contig12.2716.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=415bp AQPEEFLEDEVFSVGDDEAGLRLDSFLVERVPGQSRTYFGGLCAQGLVRVback to top mRNA from alignment at S-ischiensis_contig12:2499176..2507112+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig12.2716.1 ID=mRNA_S-ischiensis_contig12.2716.1|Name=mRNA_S-ischiensis_contig12.2716.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7937bp|location=Sequence derived from alignment at S-ischiensis_contig12:2499176..2507112+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig12:2499176..2507112+ >mRNA_S-ischiensis_contig12.2716.1 ID=mRNA_S-ischiensis_contig12.2716.1|Name=mRNA_S-ischiensis_contig12.2716.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2490bp|location=Sequence derived from alignment at S-ischiensis_contig12:2499176..2507112+ (Schizocladia ischiensis KU_0333)back to top |