mRNA_S-ischiensis_contig12.2605.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig12.2605.1 vs. uniprot
Match: A0A6H5JYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD0_9PHAE) HSP 1 Score: 160 bits (405), Expect = 1.970e-44 Identity = 80/162 (49.38%), Postives = 106/162 (65.43%), Query Frame = 1
Query: 16 CGCTCDLDADAMTDDEVYSVMKNLLGSLYSSYGGGSFIKRMPGHPRKYHFMQQDGAMLSMEDNMLLIRTLFKVGCEPGQTGYMSSGASPLDPIFWVIHPIFEKAFHLLQLAPQYADSYDFSWV--DGESGCHGSAHTDTQPFTERMLGIGDGEDLLTNRNLI 495
CGCTC+ D +DDEVY +M++ +G++ + G ++ R G +Y F QQ+G L +DNMLL+RTL + CEPG G MS G S LDP+FW +HPIFEKA LLQL+P Y D+YDF+WV D G G +T PFTER G GDG++ LTN+ +I
Sbjct: 224 CGCTCNTDFYDWSDDEVYDMMESQMGTMNNRAHGDKYVYRDLGATYQYGF-QQNGVRLEHDDNMLLMRTLLTLACEPGALGAMSVGPSILDPVFWALHPIFEKATQLLQLSPTYKDTYDFTWVGIDCGDGVSGGQVDETMPFTERDFGFGDGDEPLTNQEII 384
BLAST of mRNA_S-ischiensis_contig12.2605.1 vs. uniprot
Match: D8LM86_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM86_ECTSI) HSP 1 Score: 159 bits (401), Expect = 1.440e-42 Identity = 79/160 (49.38%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 16 CGCTCDLDADAMTDDEVYSVMKNLLGSLYSSYGGGSFIKRMPGHPRKYHFMQQDGAMLSMEDNMLLIRTLFKVGCEPGQTGYMSSGASPLDPIFWVIHPIFEKAFHLLQLAPQYADSYDFSWVDGESGCHGSAHTDTQPFTERMLGIGDGEDLLTNRNLI 495
CGCTC +DA A+ D +VY M+ + + + + G +I Y F+Q DG +S E M L+RTL K+GCEPG G MSS ASP+DP+FWV+HP+F+KA H+L L+P+Y D Y WVDGE C GS +TD P TER LG+G G D LTN L+
Sbjct: 427 CGCTCLIDAFAIPDQQVYGYMEAFMDAAMTDFSGYQYITHDEEAAYPYGFIQ-DGQRMSDEHAMFLMRTLVKIGCEPGAVGTMSSTASPVDPLFWVLHPLFDKAMHILLLSPKY-DEYTMEWVDGE--CPGSGYTDELPITERSLGLGPGTDYLTNEQLL 582
BLAST of mRNA_S-ischiensis_contig12.2605.1 vs. uniprot
Match: D7FVH6_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVH6_ECTSI) HSP 1 Score: 159 bits (401), Expect = 3.410e-42 Identity = 79/162 (48.77%), Postives = 104/162 (64.20%), Query Frame = 1
Query: 16 CGCTCDLDADAMTDDEVYSVMKNLLGSLYSSYGGGSFIKRMPGHPRKYHFMQQDGAMLSMEDNMLLIRTLFKVGCEPGQTGYMSSGASPLDPIFWVIHPIFEKAFHLLQLAPQYADSYDFSWV--DGESGCHGSAHTDTQPFTERMLGIGDGEDLLTNRNLI 495
CGCTCD D +DDEVY M++ + ++ + G ++ R G +Y F QQ+G L +DNMLL+RTL + CEPG G MS G S LDP+FW +HPIFEKA +LQL+P Y D+YDF+WV D G G +T PFTER G GDG++ LTN+ +I
Sbjct: 521 CGCTCDTDFHDWSDDEVYDKMESQMETMQNRAHGTKYVYRDDGATYQYGF-QQNGVRLEHDDNMLLMRTLLTLACEPGALGAMSVGPSILDPVFWALHPIFEKATQILQLSPTYKDTYDFTWVGKDCGDGVSGGQVDETMPFTERDFGFGDGDEPLTNQEII 681
BLAST of mRNA_S-ischiensis_contig12.2605.1 vs. uniprot
Match: A0A6H5KPW4_9PHAE (Tyrosinase_Cu-bd domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPW4_9PHAE) HSP 1 Score: 157 bits (396), Expect = 2.120e-41 Identity = 78/161 (48.45%), Postives = 103/161 (63.98%), Query Frame = 1
Query: 16 CGCTCDLDADAMTDDEVYSVMKNLLGSLYSSYGGGSFIKRMPGHPRKYHFMQQDGAMLSMEDNMLLIRTLFKVGCEPGQTGYMSSGASPLDPIFWVIHPIFEKAFHLLQLAPQYADSYDFSWVDGE--SGCHGSAHTDTQPFTERMLGIGDGEDLLTNRNL 492
CGCTC +D TDDEVY M+++L SL G S++ Y FMQ+ G L E MLL+R + +GC+PG+ G MS+GA+PLDPIFW +H FEKA H+LQL+P Y D+YDF WVD + G G D P+TE+ LG+G+G +LLTN +L
Sbjct: 555 CGCTCLVDPFEWTDDEVYDFMEDVLESLRGRANGASYVGEDVTARHPYGFMQE-GERLDEESTMLLLRQMMVIGCQPGKVGAMSTGAAPLDPIFWTLHSGFEKAQHILQLSPGYRDAYDFEWVDADCGDGVAGGKLDDVYPWTEQTLGLGEGSELLTNADL 714
BLAST of mRNA_S-ischiensis_contig12.2605.1 vs. uniprot
Match: D7FSG6_ECTSI (Common central domain of tyrosinase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG6_ECTSI) HSP 1 Score: 155 bits (391), Expect = 4.180e-41 Identity = 73/163 (44.79%), Postives = 101/163 (61.96%), Query Frame = 1
Query: 7 EKVCGCTCDLDADAMTDDEVYSVMKNLLGSLYSSYGGGSFIKRMPGHPRKYHFMQQDGAMLSMEDNMLLIRTLFKVGCEPGQTGYMSSGASPLDPIFWVIHPIFEKAFHLLQLAPQYADSYDFSWVDGESGCHGSAHTDTQPFTERMLGIGDGEDLLTNRNLI 495
++ CGCTC +DA A+++DE+YS+ L + G ++I R + F QQ+G L + M L+R + K+GCEPG G M G SP+DP+FWV+HP+FEKA H+L ++P Y D Y F W DG C GS D PFT + LG+G G +LLTNR L+
Sbjct: 410 QEPCGCTCSVDAMALSEDEIYSLTSTFLSQATQRFSGHAYISYDESSERPWGF-QQNGERLDDDATMFLLRQVVKLGCEPGAVGVMVGGVSPMDPLFWVLHPMFEKALHVLWMSPTYRDGYSFGWADGS--CSGSKVDDILPFTAQDLGMGAGTELLTNRELM 569
BLAST of mRNA_S-ischiensis_contig12.2605.1 vs. uniprot
Match: A0A6H5KMG1_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMG1_9PHAE) HSP 1 Score: 153 bits (386), Expect = 2.430e-40 Identity = 80/164 (48.78%), Postives = 102/164 (62.20%), Query Frame = 1
Query: 16 CGCTCDLDADAMTDDEVYSVMKNLLGSLYSSYGGGSFIK--RMPGHPRKYHFMQQDGAMLSMEDNMLLIRTLFKVGCEPGQTGYMSSGASPLDPIFWVIHPIFEKAFHLLQLAPQYADSYDFSWVDGES--GCHGSAHTDTQPFTERMLGIGDGEDLLTNRNLI 495
CGCTC D TDD +Y M++ + +L G FI R HP + Q G L E MLL+R L +GCEPG+ G MS+GA+PLDPIFW +H F+KA H+LQL+P Y D+YDF+WVD ES G D P+TERMLG+GDG +LLTN +L+
Sbjct: 437 CGCTCITDPFEWTDDAIYDFMEDAMETLQLRAHGDQFIDEDRSARHPLGF---AQKGKRLDDESIMLLLRQLMVIGCEPGEVGAMSTGAAPLDPIFWALHAGFDKAQHILQLSPGYRDTYDFAWVDSESCDDMSGGKLDDLYPWTERMLGLGDGTELLTNSDLV 597
BLAST of mRNA_S-ischiensis_contig12.2605.1 vs. uniprot
Match: D7FP10_ECTSI (TYRosinase family member (Tyr-3) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP10_ECTSI) HSP 1 Score: 145 bits (366), Expect = 1.520e-37 Identity = 72/164 (43.90%), Postives = 105/164 (64.02%), Query Frame = 1
Query: 1 QAEKVCGCTCDLDADAMTDDEVYSVMKNLLGSLYSSYGGGSFIKRMPGHPRKYHFMQQDGAMLSMEDNMLLIRTLFKVGCEPGQTGYMSSGASPLDPIFWVIHPIFEKAFHLLQLAPQYADSYDFSWVDGESGCHGSAHTDTQPFTERMLGIGDGEDLLTNRNL 492
Q E+ C CTC +DA A+ D +VY+ M++ + S + G +I Y FMQ D LS E+N+LL+R L K+GCEPG G M++ ASPLDP+F+++H +FEKA H++ L+P+Y DS+ W + + C GS +TD PFTE +LG+G+G +TN L
Sbjct: 416 QDERFCRCTCMIDAFAIDDKQVYAYMEDFMTSASVKFQGDQYISYDGDVRFPYGFMQ-DQTRLSDEENLLLMRYLIKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPRYRDSFSMDWAE-DGICPGSGYTDELPFTESLLGLGEGTTFVTNERL 577
BLAST of mRNA_S-ischiensis_contig12.2605.1 vs. uniprot
Match: A0A6H5JFE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE6_9PHAE) HSP 1 Score: 136 bits (343), Expect = 1.700e-36 Identity = 73/185 (39.46%), Postives = 107/185 (57.84%), Query Frame = 1
Query: 7 EKVCGCTCDLDADAMTDDEV-------YSVMKNLLGSLYSSYGGGSFIKRMPGHPRKYHFMQ---------------QDGAMLSMEDNMLLIRTLFKVGCEPGQTGYMSSGASPLDPIFWVIHPIFEKAFHLLQLAPQYADSYDFSWVDGESGCHGSAHTDTQPFTERMLGIGDGEDLLTNRNLI 495
++ CGCTC +DA A+ D++V Y+ M++ + S + G +I Y FMQ QD LS E+N+LL+R L K+GCEPG G M + ASPLDP+F+++H +FEKA H+L L+P+Y DS+ W + + C GS +TD PFTE +LG+G+G +TN L+
Sbjct: 49 KRFCGCTCMIDAFAIDDEQVGWVGGWVYAYMEDFMTSASVKFQGDQYISYDGDVRFPYGFMQARTRDNPTSSLYPPSQDQNRLSDEENLLLMRYLIKIGCEPGAVGSMMTLASPLDPLFYMLHSMFEKALHILWLSPKYRDSFSMDWAE-DGLCPGSGYTDELPFTEYLLGLGEGTAFMTNERLL 232
BLAST of mRNA_S-ischiensis_contig12.2605.1 vs. uniprot
Match: D7G530_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G530_ECTSI) HSP 1 Score: 135 bits (339), Expect = 4.660e-34 Identity = 68/141 (48.23%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 16 CGCTCDLDADAMTDDEVYSVMKNLLGSLYSSYGGGSFIKRMPGHPRKYHFMQQDGAMLSMEDNMLLIRTLFKVGCEPGQTGYMSSGASPLDPIFWVIHPIFEKAFHLLQLAPQYADSYDFSWVDGESGCHGSAHTDTQPFT 438
CGCTC +DA A+++++VY M+ + + + + G +I Y F+Q D M S E M L+RTL K+GCEPG G MS+ ASP+DPIFWV+HP+FEKA H+L L+P+Y D Y WVDGE C GS +TD P T
Sbjct: 389 CGCTCLMDAFAISEEQVYGYMQPFMEAAMTDFSGYLYITHDEEAAYPYGFIQDDHRM-SDEHAMFLMRTLVKIGCEPGAVGMMSTAASPVDPIFWVLHPLFEKAMHVLLLSPKY-DEYTMEWVDGE--CPGSGYTDELPIT 525
BLAST of mRNA_S-ischiensis_contig12.2605.1 vs. uniprot
Match: A0A6H5KIG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIG4_9PHAE) HSP 1 Score: 119 bits (299), Expect = 1.470e-29 Identity = 63/160 (39.38%), Postives = 92/160 (57.50%), Query Frame = 1
Query: 16 CGCTCDLDADAMTDDEVYSVMKNLLGSLYSSYGGGSFIKRMPGHPRKYHFMQQDGAMLSMEDNMLLIRTLFKVGCEPGQTGYMSSGASPLDPIFWVIHPIFEKAFHLLQLAPQYADSYDFSWVDGESGCHGSAHTDTQPFTERMLGIGDGEDLLTNRNLI 495
CGCTC +DA ++ +++V M+ + + + G +I Y F+Q D + S E + L+RTL K+GCEPG G MS+ ASP++P+FWV+HP+FEKA H+L L+P+Y D Y WVDGE C GS +T+ T D LL ++
Sbjct: 92 CGCTCLMDASSIPEEQVCGYMQPFMQAAMPYFRGYLYITHDEEAKFPYGFIQDDHRV-SDEHAVFLMRTLVKIGCEPGAVGIMSTAASPVNPMFWVLHPLFEKAMHILLLSPKY-DDYTMEWVDGE--CKGSGYTEELTITGEAHTAEDSYVLLAEHKVV 247 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig12.2605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig12.2605.1 >prot_S-ischiensis_contig12.2605.1 ID=prot_S-ischiensis_contig12.2605.1|Name=mRNA_S-ischiensis_contig12.2605.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=170bp QAEKVCGCTCDLDADAMTDDEVYSVMKNLLGSLYSSYGGGSFIKRMPGHPback to top mRNA from alignment at S-ischiensis_contig12:1209242..1214200- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig12.2605.1 ID=mRNA_S-ischiensis_contig12.2605.1|Name=mRNA_S-ischiensis_contig12.2605.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4959bp|location=Sequence derived from alignment at S-ischiensis_contig12:1209242..1214200- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig12:1209242..1214200- >mRNA_S-ischiensis_contig12.2605.1 ID=mRNA_S-ischiensis_contig12.2605.1|Name=mRNA_S-ischiensis_contig12.2605.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1020bp|location=Sequence derived from alignment at S-ischiensis_contig12:1209242..1214200- (Schizocladia ischiensis KU_0333)back to top |