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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1630 |
| Cds size | 1185 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815638.038516-UTR-S-ischiensis_contig12:567961..568060 | 1622815638.038516-UTR-S-ischiensis_contig12:567961..568060 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig12 567962..568060 + |
| 1695739819.6913364-UTR-S-ischiensis_contig12:567961..568060 | 1695739819.6913364-UTR-S-ischiensis_contig12:567961..568060 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig12 567962..568060 + |
| 1622815638.0645692-UTR-S-ischiensis_contig12:569245..569591 | 1622815638.0645692-UTR-S-ischiensis_contig12:569245..569591 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig12 569246..569591 + |
| 1695739819.71232-UTR-S-ischiensis_contig12:569245..569591 | 1695739819.71232-UTR-S-ischiensis_contig12:569245..569591 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig12 569246..569591 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815638.0512276-CDS-S-ischiensis_contig12:568060..569245 | 1622815638.0512276-CDS-S-ischiensis_contig12:568060..569245 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig12 568061..569245 + |
| 1695739819.7014563-CDS-S-ischiensis_contig12:568060..569245 | 1695739819.7014563-CDS-S-ischiensis_contig12:568060..569245 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig12 568061..569245 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig12.2553.1 >prot_S-ischiensis_contig12.2553.1 ID=prot_S-ischiensis_contig12.2553.1|Name=mRNA_S-ischiensis_contig12.2553.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=395bp
MAVLAPGWDAEEKDERETTLQAGVKRGPPSVSPGATPTLRDNGSDMVGHT
GAQKGPPACAAGTGDKRRAPAWMSEVSPSGMSSQAAGGVGPEGPALESAA
GARGRHGLSSGSKKRGPSQMCLHVGCTTRASFGQAGGRTHCGSHREEGMV
SLSKPLCQAVGCTKGASSGYESDRRKMFCASHHRLDGMVIARGARCQAVG
CTTGANFGHESDRRKMFCASHRLDGMVDVSGDCCQAVGCTKGASFGYESD
RRIFCASHRLDGMVSVSTAPCQAVGCKTWPLFGFQGDRRASFCSRHCLDG
MVDVISRRCEAAGCTKHPSVGHEGDRRARFCACHRPDGMVTVRTFVARQR
GARNCHLSDPRATGGGSSVQPTAGTACLDVMSGAGVLPASRLGA* back to topmRNA from alignment at S-ischiensis_contig12:567962..569591+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig12.2553.1 ID=mRNA_S-ischiensis_contig12.2553.1|Name=mRNA_S-ischiensis_contig12.2553.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1630bp|location=Sequence derived from alignment at S-ischiensis_contig12:567962..569591+ (Schizocladia ischiensis KU_0333)
TGTGGAGCGGCGACCCTCACTCATGGATTGGAGCGAGATAACGGCGCGAG
CAGAGGCCGCGGCCCGCTTCCACCTGGCGACGATCTGCAAGCCAAGGGAA
TGGCGGTTCTTGCGCCAGGCTGGGATGCTGAGGAGAAAGACGAGCGGGAG
ACGACGCTGCAGGCGGGGGTGAAAAGAGGGCCACCTTCTGTCAGCCCCGG
CGCCACACCGACTCTACGTGACAATGGCAGTGACATGGTGGGGCATACCG
GAGCACAAAAGGGTCCACCGGCCTGCGCAGCGGGGACCGGGGACAAGAGG
CGCGCTCCTGCCTGGATGAGCGAGGTCTCCCCGTCAGGCATGTCGTCGCA
GGCGGCAGGCGGCGTGGGCCCGGAGGGCCCAGCTCTGGAGAGTGCAGCAG
GAGCTCGAGGTCGTCACGGCTTGTCTTCAGGGTCCAAGAAGAGGGGCCCA
TCTCAGATGTGCCTACACGTTGGGTGCACCACTCGGGCATCCTTCGGCCA
GGCAGGGGGGAGGACGCACTGCGGCTCGCACAGGGAAGAGGGTATGGTTA
GTTTGAGTAAACCTCTTTGCCAGGCTGTGGGGTGCACTAAGGGGGCTAGT
TCCGGGTATGAGAGTGACCGCCGCAAGATGTTTTGTGCAAGCCACCACCG
CCTCGATGGGATGGTTATTGCGCGTGGAGCTCGTTGCCAGGCGGTGGGGT
GCACTACGGGGGCTAATTTCGGGCATGAGAGTGACCGCCGCAAGATGTTT
TGTGCAAGCCACCGCCTCGATGGGATGGTGGATGTAAGTGGAGATTGTTG
CCAGGCAGTGGGATGCACTAAGGGTGCTAGTTTCGGGTATGAGAGTGACC
GCCGCATATTTTGCGCAAGCCACCGCCTCGATGGGATGGTTTCTGTAAGT
ACAGCTCCTTGCCAGGCAGTGGGGTGCAAGACGTGGCCATTGTTTGGGTT
CCAGGGAGACCGCCGCGCAAGCTTTTGTTCTCGTCACTGTCTGGACGGCA
TGGTAGATGTGATCAGTCGCCGTTGCGAGGCCGCCGGATGCACCAAGCAT
CCTAGTGTCGGGCACGAGGGTGACAGGCGCGCGAGGTTCTGTGCATGTCA
CCGCCCGGATGGCATGGTTACTGTGAGGACATTCGTTGCAAGGCAGCGGG
GTGCACGAAACTGCCATCTGTCGGACCCGAGGGCCACCGGCGGGGGAAGT
TCTGTGCAGCCCACCGCAGGGACGGCATGTCTTGATGTCATGTCAGGCGC
CGGGGTGCTCCCAGCGTCCAGGTTGGGGGCGTGAGGGAGACCTGTGCGGA
ACCTTTGGGTGGCAGCCCCCGCGTGAATGGCGTGGTGAATGTGACTCTAC
CGTGGCCGGTGGCAACAGACGCCAGACCAAGGGCCCCCGTATCATTGTGG
CCTTGCTGCGGCAGGTCTGTACAAATAATTTCTTCCGGTAGTGTCCGAAG
CCTTGAAAGGCGCTGTTGCCTTGGAGTAGTGCAGACTGCACGCAAAAACG
GTGAACTCTGTACAGTAGTCCCCAGGCCTCCCGTTGCTTTGGAGGGTGCA
GTCTCCGGAGACTGTATGTAACCGTTGCGTAAAATGCCTGCGTTAGGGAA
ATAAGACAATGACTGCACATGTGACACATG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig12:567962..569591+ >mRNA_S-ischiensis_contig12.2553.1 ID=mRNA_S-ischiensis_contig12.2553.1|Name=mRNA_S-ischiensis_contig12.2553.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2370bp|location=Sequence derived from alignment at S-ischiensis_contig12:567962..569591+ (Schizocladia ischiensis KU_0333)
ATGGCGGTTCTTGCGCCAGGCTGGGATGCTGAGGAGAAAGACGAGCGGGA
GACGACGCTGCAGGCGGGGGTGAAAAGAGGGCCACCTTCTGTCAGCCCCG
GCGCCACACCGACTCTACGTGACAATGGCAGTGACATGGTGGGGCATACC
GGAGCACAAAAGGGTCCACCGGCCTGCGCAGCGGGGACCGGGGACAAGAG
GCGCGCTCCTGCCTGGATGAGCGAGGTCTCCCCGTCAGGCATGTCGTCGC
AGGCGGCAGGCGGCGTGGGCCCGGAGGGCCCAGCTCTGGAGAGTGCAGCA
GGAGCTCGAGGTCGTCACGGCTTGTCTTCAGGGTCCAAGAAGAGGGGCCC
ATCTCAGATGTGCCTACACGTTGGGTGCACCACTCGGGCATCCTTCGGCC
AGGCAGGGGGGAGGACGCACTGCGGCTCGCACAGGGAAGAGGGTATGGTT
AGTTTGAGTAAACCTCTTTGCCAGGCTGTGGGGTGCACTAAGGGGGCTAG
TTCCGGGTATGAGAGTGACCGCCGCAAGATGTTTTGTGCAAGCCACCACC
GCCTCGATGGGATGGTTATTGCGCGTGGAGCTCGTTGCCAGGCGGTGGGG
TGCACTACGGGGGCTAATTTCGGGCATGAGAGTGACCGCCGCAAGATGTT
TTGTGCAAGCCACCGCCTCGATGGGATGGTGGATGTAAGTGGAGATTGTT
GCCAGGCAGTGGGATGCACTAAGGGTGCTAGTTTCGGGTATGAGAGTGAC
CGCCGCATATTTTGCGCAAGCCACCGCCTCGATGGGATGGTTTCTGTAAG
TACAGCTCCTTGCCAGGCAGTGGGGTGCAAGACGTGGCCATTGTTTGGGT
TCCAGGGAGACCGCCGCGCAAGCTTTTGTTCTCGTCACTGTCTGGACGGC
ATGGTAGATGTGATCAGTCGCCGTTGCGAGGCCGCCGGATGCACCAAGCA
TCCTAGTGTCGGGCACGAGGGTGACAGGCGCGCGAGGTTCTGTGCATGTC
ACCGCCCGGATGGCATGGTTACTGTGAGGACATTCGTTGCAAGGCAGCGG
GGTGCACGAAACTGCCATCTGTCGGACCCGAGGGCCACCGGCGGGGGAAG
TTCTGTGCAGCCCACCGCAGGGACGGCATGTCTTGATGTCATGTCAGGCG
CCGGGGTGCTCCCAGCGTCCAGGTTGGGGGCGTGAATGGCGGTTCTTGCG
CCAGGCTGGGATGCTGAGGAGAAAGACGAGCGGGAGACGACGCTGCAGGC
GGGGGTGAAAAGAGGGCCACCTTCTGTCAGCCCCGGCGCCACACCGACTC
TACGTGACAATGGCAGTGACATGGTGGGGCATACCGGAGCACAAAAGGGT
CCACCGGCCTGCGCAGCGGGGACCGGGGACAAGAGGCGCGCTCCTGCCTG
GATGAGCGAGGTCTCCCCGTCAGGCATGTCGTCGCAGGCGGCAGGCGGCG
TGGGCCCGGAGGGCCCAGCTCTGGAGAGTGCAGCAGGAGCTCGAGGTCGT
CACGGCTTGTCTTCAGGGTCCAAGAAGAGGGGCCCATCTCAGATGTGCCT
ACACGTTGGGTGCACCACTCGGGCATCCTTCGGCCAGGCAGGGGGGAGGA
CGCACTGCGGCTCGCACAGGGAAGAGGGTATGGTTAGTTTGAGTAAACCT
CTTTGCCAGGCTGTGGGGTGCACTAAGGGGGCTAGTTCCGGGTATGAGAG
TGACCGCCGCAAGATGTTTTGTGCAAGCCACCACCGCCTCGATGGGATGG
TTATTGCGCGTGGAGCTCGTTGCCAGGCGGTGGGGTGCACTACGGGGGCT
AATTTCGGGCATGAGAGTGACCGCCGCAAGATGTTTTGTGCAAGCCACCG
CCTCGATGGGATGGTGGATGTAAGTGGAGATTGTTGCCAGGCAGTGGGAT
GCACTAAGGGTGCTAGTTTCGGGTATGAGAGTGACCGCCGCATATTTTGC
GCAAGCCACCGCCTCGATGGGATGGTTTCTGTAAGTACAGCTCCTTGCCA
GGCAGTGGGGTGCAAGACGTGGCCATTGTTTGGGTTCCAGGGAGACCGCC
GCGCAAGCTTTTGTTCTCGTCACTGTCTGGACGGCATGGTAGATGTGATC
AGTCGCCGTTGCGAGGCCGCCGGATGCACCAAGCATCCTAGTGTCGGGCA
CGAGGGTGACAGGCGCGCGAGGTTCTGTGCATGTCACCGCCCGGATGGCA
TGGTTACTGTGAGGACATTCGTTGCAAGGCAGCGGGGTGCACGAAACTGC
CATCTGTCGGACCCGAGGGCCACCGGCGGGGGAAGTTCTGTGCAGCCCAC
CGCAGGGACGGCATGTCTTGATGTCATGTCAGGCGCCGGGGTGCTCCCAG
CGTCCAGGTTGGGGGCGTGA back to top
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