mRNA_S-ischiensis_contig113.2454.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig113.2454.1 vs. uniprot
Match: A0A8B7XVX9_ACAPL (G2/mitotic-specific cyclin-A-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XVX9_ACAPL) HSP 1 Score: 64.3 bits (155), Expect = 6.910e-9 Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 2
Query: 2 ACLQIAAKLEEVEPVSLQDLLACPRGEGLATTPGEVLQMETRVADALSFRFFLPTANAFLPRLQRAMGWEPGCKGAHLSEYLLELSLTGPDLVGEPPSSVAAAAIRLAQFVLS 340
A + +AAK EE+ P + + + T +VL+ME + LSF +PTANAFLPR +A + + HL+ YL EL+L + V PS++AAAA+ LA + LS
Sbjct: 274 ASMFLAAKFEEIYPPEVNEFVYITDD---TYTVKQVLRMEHLILKVLSFDVAVPTANAFLPRFLKAC--KADSRMEHLARYLAELTLQDFEYVKFVPSTIAAAAVCLANYTLS 381
BLAST of mRNA_S-ischiensis_contig113.2454.1 vs. uniprot
Match: UPI00125D8D6C (cyclin-A1-1-like n=3 Tax=Ipomoea TaxID=4119 RepID=UPI00125D8D6C) HSP 1 Score: 62.8 bits (151), Expect = 2.440e-8 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 2
Query: 2 ACLQIAAKLEEVEPVSLQDLLACPRGEGLATTPGEVLQMETRVADALSFRFFLPTANAFLPRLQRA-MGWEPGC--KGAHLSEYLLELSLTGPDLVGEPPSSVAAAAIRLAQFVLSP 343
AC+ IA+K EE+ +++ EVLQME+ V + L F PTA FL R RA G+ + HL+ YL ELSL D++ PS VAA+AI LA+++L+P
Sbjct: 314 ACMMIASKYEEICAPQVEEFCYITDNTYFKE---EVLQMESAVLNYLKFEMTAPTAKCFLRRFVRATQGFNEASSLQLEHLASYLAELSLLAYDMLCYSPSLVAASAIFLARYILTP 427
BLAST of mRNA_S-ischiensis_contig113.2454.1 vs. uniprot
Match: A0A7S1FJK2_NOCSC (G2/mitotic-specific cyclin-B3 n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FJK2_NOCSC) HSP 1 Score: 61.6 bits (148), Expect = 6.200e-8 Identity = 42/108 (38.89%), Postives = 60/108 (55.56%), Query Frame = 2
Query: 14 IAAKLEEVEPVSLQDLLACPRGEGLATTPGEVLQMETRVADALSFRFFLPTANAFLPRLQRAMGWEPGCKGAHLSEYLLELSLTGPDLVGEPPSSVAAAAIRLAQFVL 337
IA+K EEV P + D + A T ++++ME R+ AL FR +PTA FL R+ R HLS++LLELSLT +V PS +A++A+ LA +L
Sbjct: 347 IASKFEEVVPPEITDFVYIAAD---AYTKEDLIEMEIRILSALEFRVAIPTAAHFLERVMRVS--RASELQQHLSQFLLELSLTEYSMVKYLPSHLASSALLLANRLL 449
BLAST of mRNA_S-ischiensis_contig113.2454.1 vs. uniprot
Match: A0A226N6X4_CALSU (Cyclin N-terminal domain-containing protein (Fragment) n=1 Tax=Callipepla squamata TaxID=9009 RepID=A0A226N6X4_CALSU) HSP 1 Score: 60.5 bits (145), Expect = 9.500e-8 Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 2
Query: 2 ACLQIAAKLEEVEPVSLQDLLACPRGEGLATTPGEVLQMETRVADALSFRFFLPTANAFLPRLQRAMGWEPGCKGAHLSEYLLELSLTGPDLVGEPPSSVAAAAIRLAQFVLS 340
A L +A+K EE+ ++DL + A T ++ QMET++ AL FRF+LP FL R E + L+++LLELS+ D+V PPS +AAA LA + +
Sbjct: 127 AALFLASKYEEINVPPIEDLSSVTTN---AFTAAQICQMETKILQALDFRFYLPLHLQFLRRASEFA--EVDEEQQFLAKFLLELSIVDYDMVHFPPSMTSAAAFCLAMKLFN 234
BLAST of mRNA_S-ischiensis_contig113.2454.1 vs. uniprot
Match: UPI001CB9464E (cyclin-A1-4-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9464E) HSP 1 Score: 60.5 bits (145), Expect = 1.360e-7 Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 2
Query: 5 CLQIAAKLEEVEPVSLQDLLACPRGEGLATTPGEVLQMETRVADALSFRFFLPTANAFLPRLQRAMGWEP----GCKGAHLSEYLLELSLTGPDLVGEPPSSVAAAAIRLAQFVLSP 343
C+ IA+K E++ P+ ++D + T EVLQME+ V + F PT +FL + +G+ P G K +L+ Y+ ELSL +++ PS VAA+AI LA+F+L+P
Sbjct: 104 CMMIASKYEDIRPLQVEDYCFLMAHK---CTKDEVLQMESSVLNFFKFEMTAPTVKSFLGLI---LGFLPASAQGNKIYYLASYISELSLLEYNMLCYAPSLVAASAIFLARFLLTP 214
BLAST of mRNA_S-ischiensis_contig113.2454.1 vs. uniprot
Match: UPI001CB9B9C7 (cyclin-A1-4 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9B9C7) HSP 1 Score: 60.1 bits (144), Expect = 2.040e-7 Identity = 43/117 (36.75%), Postives = 61/117 (52.14%), Query Frame = 2
Query: 2 ACLQIAAKLEEVEPVSLQDLLACPRGEGLATTPGEVLQMETRVADALSFRFFLPTANAFLPRLQRAM---GWEPGCKGAHLSEYLLELSLTGPDLVGEPPSSVAAAAIRLAQFVLSP 343
AC+ IA+K EE+ +++ EVLQME+ V + L F PT FL R RA P + +L+ Y+ ELSL +++ PS +AA+AI LA+FVLSP
Sbjct: 291 ACMMIASKYEEICAPQVEEFCYITDNTYFKD---EVLQMESTVLNFLKFEMTAPTVRCFLRRFVRAAQGANEAPSMQLEYLASYISELSLLEYNMLCYAPSLIAASAIFLARFVLSP 404
BLAST of mRNA_S-ischiensis_contig113.2454.1 vs. uniprot
Match: UPI0014559FEF (G2/mitotic-specific cyclin-A-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014559FEF) HSP 1 Score: 59.7 bits (143), Expect = 2.720e-7 Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = 2
Query: 2 ACLQIAAKLEEVEPVSLQDLLACPRGEGLATTPGEVLQMETRVADALSFRFFLPTANAFLPRLQRAMGWEPGCKGAHLSEYLLELSLTGPDLVGEPPSSVAAAAIRLAQFVLS 340
A + +AAK EE+ P + + + T +VL+ME + LSF +PTAN F+ R +++ + + HLS +L EL+L + + PS++AAAA+ LA F LS
Sbjct: 276 ASMFLAAKFEEIYPPEVNEFVYITDD---TYTVKQVLRMEHLILKVLSFDVAVPTANVFISRYLQSV--KADSRTEHLSRFLAELTLQDHEFIKYIPSTIAAAAVFLANFTLS 383
BLAST of mRNA_S-ischiensis_contig113.2454.1 vs. uniprot
Match: A0A059BYA2_EUCGR (Cyclin N-terminal domain-containing protein n=6 Tax=Myrtoideae TaxID=1699513 RepID=A0A059BYA2_EUCGR) HSP 1 Score: 59.7 bits (143), Expect = 2.810e-7 Identity = 43/117 (36.75%), Postives = 61/117 (52.14%), Query Frame = 2
Query: 2 ACLQIAAKLEEVEPVSLQDLLACPRGEGLATTPGEVLQMETRVADALSFRFFLPTANAFLPRLQRA---MGWEPGCKGAHLSEYLLELSLTGPDLVGEPPSSVAAAAIRLAQFVLSP 343
AC+ IAAK EE+ +++ EVLQME+ V + L F PT FL R RA + P + ++ Y+ ELSL D++ PS VAA+AI LA+FV++P
Sbjct: 312 ACMMIAAKYEEICAPQVEEFCYITDNTYFKE---EVLQMESSVLNYLKFEMTAPTVKCFLRRFVRAAQGVNEVPSLQLECMANYIAELSLLEYDMLCYAPSLVAASAIFLAKFVITP 425
BLAST of mRNA_S-ischiensis_contig113.2454.1 vs. uniprot
Match: A0A251UQE6_HELAN (Putative cyclin A1,1 n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UQE6_HELAN) HSP 1 Score: 59.3 bits (142), Expect = 3.750e-7 Identity = 42/117 (35.90%), Postives = 60/117 (51.28%), Query Frame = 2
Query: 2 ACLQIAAKLEEVEPVSLQDLLACPRGEGLATTPGEVLQMETRVADALSFRFFLPTANAFLPRLQRAMGWEPGCKGAHL---SEYLLELSLTGPDLVGEPPSSVAAAAIRLAQFVLSP 343
AC+ IA+K EE+ +++ EVLQME++V + L F PT FL R RA HL + Y+ ELSL +++ PS VAA+AI LA+++LSP
Sbjct: 287 ACMMIASKYEEICAPQVEEFCYITDNTYFKD---EVLQMESKVLNFLKFELTAPTVRCFLRRFVRAAHGVNEAPSMHLECLASYISELSLVEYNMLRYAPSLVAASAIFLARYILSP 400
BLAST of mRNA_S-ischiensis_contig113.2454.1 vs. uniprot
Match: A0A1U8AFW3_NELNU (cyclin-A1-4 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AFW3_NELNU) HSP 1 Score: 58.9 bits (141), Expect = 5.160e-7 Identity = 44/117 (37.61%), Postives = 57/117 (48.72%), Query Frame = 2
Query: 2 ACLQIAAKLEEVEPVSLQDLLACPRGEGLATTPGEVLQMETRVADALSFRFFLPTANAFLPRLQRAMGWEPGCKGAHL---SEYLLELSLTGPDLVGEPPSSVAAAAIRLAQFVLSP 343
AC+ IAAK EE+ +++ EVLQME V + L F PTA FL R R HL + YL ELSL ++ PS +AA+AI LA+F+LSP
Sbjct: 310 ACMMIAAKYEEICAPQVEEFCYITDNTYFKD---EVLQMEAAVLNYLKFEMTAPTAKCFLRRFVRVAQGSSELPLLHLECMANYLAELSLLEYSVLCYAPSMIAASAIFLAKFILSP 423 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig113.2454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig113.2454.1 >prot_S-ischiensis_contig113.2454.1 ID=prot_S-ischiensis_contig113.2454.1|Name=mRNA_S-ischiensis_contig113.2454.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=177bp GLPADRGQAGGGGACFPPGPAGLPQGGGPGHHARRGAANGDPRGGRAVLPback to top mRNA from alignment at S-ischiensis_contig113:131388..134523+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig113.2454.1 ID=mRNA_S-ischiensis_contig113.2454.1|Name=mRNA_S-ischiensis_contig113.2454.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3136bp|location=Sequence derived from alignment at S-ischiensis_contig113:131388..134523+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig113:131388..134523+ >mRNA_S-ischiensis_contig113.2454.1 ID=mRNA_S-ischiensis_contig113.2454.1|Name=mRNA_S-ischiensis_contig113.2454.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1062bp|location=Sequence derived from alignment at S-ischiensis_contig113:131388..134523+ (Schizocladia ischiensis KU_0333)back to top |