mRNA_S-ischiensis_contig110.2422.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig110.2422.1 vs. uniprot
Match: A0A7S6U9Y1_9STRA (ATP synthase subunit beta, chloroplastic n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A7S6U9Y1_9STRA) HSP 1 Score: 797 bits (2058), Expect = 7.840e-289 Identity = 415/424 (97.88%), Postives = 415/424 (97.88%), Query Frame = 1
Query: 4 NTSSGVNTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFFITTLFCCRSF 1275
NTSSGVNTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERF F F
Sbjct: 2 NTSSGVNTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPFFVAEVF 425
BLAST of mRNA_S-ischiensis_contig110.2422.1 vs. uniprot
Match: A0A7T7IGP2_9STRA (ATP synthase subunit beta n=1 Tax=Nematochrysopsis sessilis var. vectensis TaxID=2797601 RepID=A0A7T7IGP2_9STRA) HSP 1 Score: 717 bits (1850), Expect = 3.630e-257 Identity = 367/423 (86.76%), Postives = 392/423 (92.67%), Query Frame = 1
Query: 7 TSSGVNTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFFITTLFCCRSF 1275
T++ GYVTQIIGPV+D+TFPSG LP IYNA++++ N I+CEVQQLLGDNKVRAVSMSATDGLQR V+ +DTGAPINVPVG TLGRIFNVLGEPVD LGDVD+S T PIHRPAP FTDLET+P+IFETGIKVVDLLAPYR+GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI+E+NL+ESKVALVYGQMNEPPGARMRVGL+ALTMAEYFRD+NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG LQERITSTT+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ +IVG+EHY TAQ+VKETLQRYKELQDIIAILGIDELSE+DRLVVARARKIERF F F
Sbjct: 2 TATKFGVGYVTQIIGPVLDITFPSGNLPAIYNAINVQAKNGIIVCEVQQLLGDNKVRAVSMSATDGLQRGVDAIDTGAPINVPVGVCTLGRIFNVLGEPVDELGDVDRSVTFPIHRPAPAFTDLETQPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIKENNLTESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRAIVGDEHYDTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVARARKIERFLSQPFFVAEIF 424
BLAST of mRNA_S-ischiensis_contig110.2422.1 vs. uniprot
Match: A0A7T7DA94_9STRA (ATP synthase subunit beta (Fragment) n=2 Tax=Tetrasporopsidaceae TaxID=2797588 RepID=A0A7T7DA94_9STRA) HSP 1 Score: 713 bits (1841), Expect = 8.180e-256 Identity = 366/418 (87.56%), Postives = 390/418 (93.30%), Query Frame = 1
Query: 22 NTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFFITTLFCCRSF 1275
N GYV+QIIGPV+D+TFPSG LP+I++A+ +K ++K I+CE+QQLLGDNKVRAVSMSATDGL+R E +DT API+VPVGK TLGRIFNVLGEPVD +G+V +ETLPIHR APKFT+LETKP+IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI+EDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG LQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR LAAKGIYPAVDPLDSTSTMLQPSIVGEEHY+TAQ VKETLQRYKELQDIIAILGIDELSEDDRL+VARARK+ERF F F
Sbjct: 7 NVGYVSQIIGPVLDITFPSGKLPQIFHAVHVKDNSKIIVCEIQQLLGDNKVRAVSMSATDGLRRGAEAIDTKAPISVPVGKITLGRIFNVLGEPVDEMGEVLATETLPIHRDAPKFTELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIKEDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERITSTKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQAVKETLQRYKELQDIIAILGIDELSEDDRLLVARARKVERFLSQPFFVAEVF 424
BLAST of mRNA_S-ischiensis_contig110.2422.1 vs. uniprot
Match: ATPB_FUCVE (ATP synthase subunit beta, chloroplastic n=207 Tax=Phaeophyceae TaxID=2870 RepID=ATPB_FUCVE) HSP 1 Score: 713 bits (1841), Expect = 8.490e-256 Identity = 366/418 (87.56%), Postives = 385/418 (92.11%), Query Frame = 1
Query: 22 NTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFFITTLFCCRSF 1275
N GY+TQ+IGPV+D F SG+LPKIYNAL+++ + IICEVQQLLGDN+VRA+SMSATDGLQR V+V DT API+VPVGK TLGRIFNVLG+P+DNLGD +ETLPIHR AP FTDLET+PAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI E NL ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG LQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHYKTAQ+VKETLQRYKELQDIIAILGIDELSE+DRLVV RARKIERF F F
Sbjct: 8 NIGYITQVIGPVIDAVFSSGVLPKIYNALEVEGKDGPIICEVQQLLGDNRVRAISMSATDGLQRGVKVYDTKAPISVPVGKTTLGRIFNVLGQPIDNLGDTPSNETLPIHRSAPAFTDLETRPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVF 425
BLAST of mRNA_S-ischiensis_contig110.2422.1 vs. uniprot
Match: B7T1R0_VAULI (ATP synthase subunit beta, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1R0_VAULI) HSP 1 Score: 704 bits (1818), Expect = 2.400e-252 Identity = 363/422 (86.02%), Postives = 384/422 (91.00%), Query Frame = 1
Query: 10 SSGVNTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFFITTLFCCRSF 1275
++ + GYVTQIIGPV+DV FPSG LPKIYNA+++ I+CEVQQLLGDNKVRAV+MSATDGL+R +EV DTGAPINVPVG+ TLGRIFN+LGEPVDNLG++ + TLPIHR AP FTDLET P+IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGV ERTREGNDLYMEMKESGVI+ +NL+ESKVALVYGQMNEPPGARMRVGL+ALTMAEYFRDIN QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG LQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLD TTVLSRGLAAKGIYPAVDPLDSTSTMLQ SIVG EHYKTAQ VKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERF F F
Sbjct: 3 TTSTDLGYVTQIIGPVLDVVFPSGNLPKIYNAINVLNKKNIIVCEVQQLLGDNKVRAVAMSATDGLKRGIEVHDTGAPINVPVGEVTLGRIFNILGEPVDNLGEISGAPTLPIHREAPSFTDLETTPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVEERTREGNDLYMEMKESGVIQANNLTESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDINNQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDTTTVLSRGLAAKGIYPAVDPLDSTSTMLQESIVGTEHYKTAQAVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPFFVAEVF 424
BLAST of mRNA_S-ischiensis_contig110.2422.1 vs. uniprot
Match: ATPB_DICDH (ATP synthase subunit beta, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=ATPB_DICDH) HSP 1 Score: 695 bits (1794), Expect = 1.450e-248 Identity = 362/425 (85.18%), Postives = 383/425 (90.12%), Query Frame = 1
Query: 4 NTSSGVNTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSN-KSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFFITTLFCCRSF 1275
N +N GY+TQ+IGPV+D F +G LPKIYNAL++K+ + +IICEVQQL DN+VRA++MSATDGLQR VEV+DT API VPVGKATLGRIFNVLG+ VDN+ + LPIHRPAP FTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI E NLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDIN+QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG LQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG EHY TAQ+VK+TLQRYKELQDIIAILGIDELSE+DRLVV RARKIERF F F
Sbjct: 6 NREPELNIGYITQVIGPVIDAVFSAGQLPKIYNALEVKSKDGTTIICEVQQLFNDNRVRAIAMSATDGLQRGVEVIDTQAPILVPVGKATLGRIFNVLGQTVDNIEIGTGEDRLPIHRPAPSFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINESNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINRQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPVIVGSEHYDTAQLVKKTLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEVF 430
BLAST of mRNA_S-ischiensis_contig110.2422.1 vs. uniprot
Match: A0A7U0KT49_OLILU (ATP synthase subunit beta n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0KT49_OLILU) HSP 1 Score: 694 bits (1792), Expect = 2.250e-248 Identity = 359/416 (86.30%), Postives = 380/416 (91.35%), Query Frame = 1
Query: 28 GYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFFITTLFCCRSF 1275
G VTQIIGPV+D+ FPSG LP+IYNA+ I + I+ EVQQLLGDN+VRAV+MS++DGL+R V+V DTGAPI+VPVGKATLGRIFN+LG P+D LGDV SETLPIHR AP FTDLETKP+IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI E NL ESKVALVYGQMNEPPGARMRVGL+ALTMAEYFRD+NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG LQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP+IVG EHYK AQ VK+TLQRYKELQDIIAILGIDELSE DRL+VARARKIERF F F
Sbjct: 8 GRVTQIIGPVLDIEFPSGNLPQIYNAVIISDGDNKIVAEVQQLLGDNRVRAVAMSSSDGLKRGVQVEDTGAPISVPVGKATLGRIFNILGVPIDELGDVTTSETLPIHRKAPLFTDLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGAEHYKIAQDVKQTLQRYKELQDIIAILGIDELSESDRLIVARARKIERFLSQPFFVAEVF 423
BLAST of mRNA_S-ischiensis_contig110.2422.1 vs. uniprot
Match: A0A1X9PV05_9RHOD (ATP synthase subunit beta n=4 Tax=Compsopogonophyceae TaxID=930023 RepID=A0A1X9PV05_9RHOD) HSP 1 Score: 694 bits (1791), Expect = 3.320e-248 Identity = 356/418 (85.17%), Postives = 382/418 (91.39%), Query Frame = 1
Query: 22 NTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFFITTLFCCRSF 1275
N G VTQIIGPV+D+ F SG LPK++NA+ + + +K I CEVQQLLGDN+VRAV+MS+TDGL+R VEV+D+GAPI+VPVG TLGRIFNVLGEPVDNLGDV K +TLPIHRPAP FT LETKP+IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKES VI E+++++SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG LQERITSTT+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHY TAQ VK TLQRYKELQDIIAILG+DELSE+DR VARARKIERF F F
Sbjct: 7 NIGTVTQIIGPVLDIEFNSGELPKVFNAVTVNSGDKIITCEVQQLLGDNRVRAVAMSSTDGLKRGVEVVDSGAPISVPVGTPTLGRIFNVLGEPVDNLGDVSKQDTLPIHRPAPLFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEESITDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGQEHYTTAQQVKSTLQRYKELQDIIAILGLDELSEEDRATVARARKIERFLSQPFFVAEVF 424
BLAST of mRNA_S-ischiensis_contig110.2422.1 vs. uniprot
Match: ATPB_PORPU (ATP synthase subunit beta, chloroplastic n=18 Tax=Eukaryota TaxID=2759 RepID=ATPB_PORPU) HSP 1 Score: 694 bits (1790), Expect = 4.710e-248 Identity = 358/422 (84.83%), Postives = 382/422 (90.52%), Query Frame = 1
Query: 10 SSGVNTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFFITTLFCCRSF 1275
S+ +TG VTQIIGPV+D+ FP+G LPK++NAL +++++ +I CEVQQLLGDNKVRAVSMS+T+GL+R VEV+DTGAPI+VPVG TLGRIFNVLGEPVDNLG V TLPIHRPAP FT LETKP+IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKES VI EDNL ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG LQERITSTT+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR LAAKGIYPAVDPLDSTSTMLQP IVG +HY TAQ VK TLQRYKELQDIIAILG+DELSE+DR V+RARKIERF F F
Sbjct: 3 STTKSTGSVTQIIGPVLDIAFPNGQLPKVFNALKVQSTDGTITCEVQQLLGDNKVRAVSMSSTEGLKRGVEVVDTGAPISVPVGTNTLGRIFNVLGEPVDNLGPVSSESTLPIHRPAPAFTKLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEDNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVGTDHYSTAQEVKSTLQRYKELQDIIAILGLDELSEEDRQTVSRARKIERFLSQPFFVAEVF 424
BLAST of mRNA_S-ischiensis_contig110.2422.1 vs. uniprot
Match: A0A516ZAB3_9STRA (ATP synthase subunit beta, chloroplastic n=1 Tax=Pseudopedinella elastica TaxID=35684 RepID=A0A516ZAB3_9STRA) HSP 1 Score: 690 bits (1781), Expect = 1.140e-246 Identity = 358/422 (84.83%), Postives = 382/422 (90.52%), Query Frame = 1
Query: 13 SGVNTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETL-PIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFFITTLFCCRSF 1275
+ N GY+TQIIGPV+DV FP+G LPKIYNA+ + T+ K + CEVQQLLGDNKVRAVSMSATDGLQR +EV+DTGA I+VPVG TLGRIFNVLG+PVD D+ T PIHRPAP FTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEM+ESGVI E+NL++SKVALVYGQMNEPPGARMRVGL+ALTMAEYFRD+NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG LQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLA+KGIYPAVDPLDSTSTMLQPSIVG HY+ AQ +KETLQRYKELQDIIAILGIDELSE+DRLVVARARK+ERF F F
Sbjct: 4 TNTNIGYITQIIGPVLDVVFPAGELPKIYNAITVTTTTKVVTCEVQQLLGDNKVRAVSMSATDGLQRGLEVVDTGAAISVPVGTVTLGRIFNVLGDPVDEGIDIPTDCTRSPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMRESGVINENNLTDSKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSIVGAAHYEIAQNIKETLQRYKELQDIIAILGIDELSEEDRLVVARARKVERFLSQPFFVAEVF 425 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig110.2422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig110.2422.1 >prot_S-ischiensis_contig110.2422.1 ID=prot_S-ischiensis_contig110.2422.1|Name=mRNA_S-ischiensis_contig110.2422.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=381bp MSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSEback to top mRNA from alignment at S-ischiensis_contig110:146639..148064+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig110.2422.1 ID=mRNA_S-ischiensis_contig110.2422.1|Name=mRNA_S-ischiensis_contig110.2422.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1426bp|location=Sequence derived from alignment at S-ischiensis_contig110:146639..148064+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig110:146639..148064+ >mRNA_S-ischiensis_contig110.2422.1 ID=mRNA_S-ischiensis_contig110.2422.1|Name=mRNA_S-ischiensis_contig110.2422.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2286bp|location=Sequence derived from alignment at S-ischiensis_contig110:146639..148064+ (Schizocladia ischiensis KU_0333)back to top |