mRNA_S-ischiensis_contig110.2415.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig110.2415.1 vs. uniprot
Match: A0A6N2K9N9_SALVM (Uncharacterized protein n=7 Tax=Magnoliopsida TaxID=3398 RepID=A0A6N2K9N9_SALVM) HSP 1 Score: 197 bits (501), Expect = 5.330e-57 Identity = 120/201 (59.70%), Postives = 131/201 (65.17%), Query Frame = 1
Query: 22 GILNALAMILHGLIHTTSSIHRLQLGLLGYLIPFAPLAFVSQ-----LPSPSAVFPISTHFTAPLEIPSTPIILKSDSFYYILEVKLQTLIIDLPNHLQTLYAQ*FRITLASSVLPRLLARS*PMLIRQVNVRTSSLTKEVYNPQAFFPSRGIALSGFRPLQKIPHCCLP*ESGPCLSSSVADHPLKPATDRRLGRLLPHQ 609
GILNALA LHG I T SIHRL+LGLLGYLIPFAPLAFVSQ + SP FPISTHFTAP EIPS P +L+ SF+ + V+ L DL +HLQTLYAQ FRITLASSVLPRLLA Q+ P RGIA S FRPL+KIPHCCLP SVADHPL PATD RLG+LLPHQ
Sbjct: 15 GILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLA------------------------QSLLPPRGIAPSSFRPLRKIPHCCLP--------PSVADHPLGPATDHRLGKLLPHQ 183
BLAST of mRNA_S-ischiensis_contig110.2415.1 vs. uniprot
Match: A0A5E4FJV7_PRUDU (PREDICTED: conserved n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4FJV7_PRUDU) HSP 1 Score: 182 bits (463), Expect = 8.620e-54 Identity = 113/205 (55.12%), Postives = 123/205 (60.00%), Query Frame = 1
Query: 16 PGGILNALAMILHGLIHTTSSIHRLQLGLLGYLIPFAPLAFVSQLP-------SPSAVFPISTHFTAPLEIPSTPIILKSDSFYYILEVKLQTLIIDLPNHLQTLYAQ*FRITLASSVLPRLLARS*PMLIRQVNVRTSSLTKEVYNPQAFFPSRGIALSGFRPLQKIPHCCLP*ESGPCLSSSVADHPLKPATDRRLGRLLPHQ 609
PGGILNALA LHG I TT SIHRL+LGLLGYLIPFAPLAFVSQ SP FPISTHFTAP EIPS P +L+ SF+ + +V+ L DL +H Q LYAQ FRI LASS SGFRPL+KIPH CLP ES PCLS SVADHPL PATD RLG+LLPHQ
Sbjct: 4 PGGILNALATALHGSIRTTPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSKVEPWDLTADLKSHRQKLYAQSFRIMLASS------------------------------------------SGFRPLRKIPHYCLPQESRPCLSPSVADHPLGPATDHRLGKLLPHQ 166
BLAST of mRNA_S-ischiensis_contig110.2415.1 vs. uniprot
Match: A0A6D2LA75_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2LA75_9BRAS) HSP 1 Score: 159 bits (402), Expect = 9.250e-46 Identity = 104/205 (50.73%), Postives = 111/205 (54.15%), Query Frame = 1
Query: 16 PGGILNALAMILHGLIHTTSSIHRLQLGLLGYLIPFAPLAFVSQLP-------SPSAVFPISTHFTAPLEIPSTPIILKSDSFYYILEVKLQTLIIDLPNHLQTLYAQ*FRITLASSVLPRLLARS*PMLIRQVNVRTSSLTKEVYNPQAFFPSRGIALSGFRPLQKIPHCCLP*ESGPCLSSSVADHPLKPATDRRLGRLLPHQ 609
PGGILNALA LHG I T SIHRL+LGLLGYLIPFAPLAFVSQ SP FPISTHFTAP EIPS P +LK SF+ + V+ L DL +HLQTLYAQ FRITLASS ESGPCLS SVADHPL PATD RLG+LLPHQ
Sbjct: 4 PGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLKLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASS----------------------------------------------------------ESGPCLSPSVADHPLGPATDHRLGKLLPHQ 150
BLAST of mRNA_S-ischiensis_contig110.2415.1 vs. uniprot
Match: M1DBW2_SOLTU (30S ribosomal protein S12, chloroplastic n=3 Tax=Pentapetalae TaxID=1437201 RepID=M1DBW2_SOLTU) HSP 1 Score: 154 bits (389), Expect = 3.890e-42 Identity = 96/169 (56.80%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 16 PGGILNALAMILHGLIHTTSSIHRLQLGLLGYLIPFAPLAFVSQLP-------SPSAVFPISTHFTAPLEIPSTPIILKSDSFYYILEVKLQTLIIDLPNHLQTLYAQ*FRITLASSVLPRLLARS*PMLIRQVNVRTSSLTKEVYNPQAFFPSRGIALSGFRPLQKIP 501
PGGILNALA LHG I T SIHRL+LGLLGYLIPFAPLAFVSQ SP FPISTHFTAP EIPS P +L+ SF+ + V+ L DL +HLQTLYAQ FRITLASSVLPRLLA++ V SS KEV++P AF+ + F K P
Sbjct: 73 PGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN--------TVIASSPGKEVHDPWAFYLHAALLRQAFAHCGKFP 233
BLAST of mRNA_S-ischiensis_contig110.2415.1 vs. uniprot
Match: A0A1J7I993_LUPAN (Uncharacterized protein n=4 Tax=Mesangiospermae TaxID=1437183 RepID=A0A1J7I993_LUPAN) HSP 1 Score: 146 bits (369), Expect = 8.390e-42 Identity = 85/126 (67.46%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 16 PGGILNALAMILHGLIHTTSSIHRLQLGLLGYLIPFAPLAFVSQLP-------SPSAVFPISTHFTAPLEIPSTPIILKSDSFYYILEVKLQTLIIDLPNHLQTLYAQ*FRITLASSVLPRLLARS 372
PGGILNALA LHG I TT SIHRL+LGLLGYLIPFAPLAFVSQ SP FPISTHFTAP EIPSTP +L+ SF+ + V+ L +L +HLQTLYAQ FRITLASS+LPRLLA+S
Sbjct: 4 PGGILNALATALHGSIRTTPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSTPTLLQLGSFHRLSRVEPWDLTANLKSHLQTLYAQSFRITLASSILPRLLAQS 129
BLAST of mRNA_S-ischiensis_contig110.2415.1 vs. uniprot
Match: Q5W7C9_ORYSJ (Unknow protein n=2 Tax=Mesangiospermae TaxID=1437183 RepID=Q5W7C9_ORYSJ) HSP 1 Score: 145 bits (365), Expect = 1.700e-39 Identity = 94/169 (55.62%), Postives = 105/169 (62.13%), Query Frame = 1
Query: 16 PGGILNALAMILHGLIHTTSSIHRLQLGLLGYLIPFAPLAFVSQLP-------SPSAVFPISTHFTAPLEIPSTPIILKSDSFYYILEVKLQTLIIDLPNHLQTLYAQ*FRITLASSVLPRLLARS*PMLIRQVNVRTSSLTKEVYNPQAFFPSRGIALSGFRPLQKIP 501
PGGILNALA LHG TT SIHRL+LGLLG LIPFAPLAFVSQ SP FPIS HFTAP EIPS P +L+ SF+ + V+ L DL +HLQTLYAQ FRITLASSVLPRLLA++ V SS KEV +P AF + F K P
Sbjct: 4 PGGILNALATALHGSSRTTPSIHRLRLGLLGSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN--------TVIVSSPRKEVDDPWAFHLHAALLRQAFAHCGKFP 164
BLAST of mRNA_S-ischiensis_contig110.2415.1 vs. uniprot
Match: A0A151S2A8_CAJCA (Uncharacterized protein (Fragment) n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S2A8_CAJCA) HSP 1 Score: 141 bits (356), Expect = 3.400e-39 Identity = 83/126 (65.87%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 16 PGGILNALAMILHGLIHTTSSIHRLQLGLLGYLIPFAPLAFVSQLP-------SPSAVFPISTHFTAPLEIPSTPIILKSDSFYYILEVKLQTLIIDLPNHLQTLYAQ*FRITLASSVLPRLLARS 372
PGGILNALA LHG I SIHRL+LGLLGYLIPFAPLAFVSQ SP FPISTHFTAP EIPS P +L+ SF+ + V+ L +L +HLQTLYAQ FRITLASSVLPRLLA+S
Sbjct: 53 PGGILNALATALHGSIRAAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTANLKSHLQTLYAQSFRITLASSVLPRLLAQS 178
BLAST of mRNA_S-ischiensis_contig110.2415.1 vs. uniprot
Match: A0A6A5MV91_LUPAL (Uncharacterized protein n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6A5MV91_LUPAL) HSP 1 Score: 139 bits (351), Expect = 1.670e-38 Identity = 83/124 (66.94%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 22 GILNALAMILHGLIHTTSSIHRLQLGLLGYLIPFAPLAFVSQLP-------SPSAVFPISTHFTAPLEIPSTPIILKSDSFYYILEVKLQTLIIDLPNHLQTLYAQ*FRITLASSVLPRLLARS 372
GILNALA LHG I TT SIHRL+LGLLGYLIPFAPLAFVSQ SP FPISTHFTAP EIPS P +L+ SF+ + V+ L +L +HLQTLYAQ FRITLASSVLPRLLA+S
Sbjct: 50 GILNALATALHGSIRTTPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTLLQLGSFHRLSRVEPWDLTANLKSHLQTLYAQSFRITLASSVLPRLLAQS 173
BLAST of mRNA_S-ischiensis_contig110.2415.1 vs. uniprot
Match: A0A6A5L520_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L520_LUPAL) HSP 1 Score: 139 bits (351), Expect = 1.990e-38 Identity = 83/124 (66.94%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 22 GILNALAMILHGLIHTTSSIHRLQLGLLGYLIPFAPLAFVSQLP-------SPSAVFPISTHFTAPLEIPSTPIILKSDSFYYILEVKLQTLIIDLPNHLQTLYAQ*FRITLASSVLPRLLARS 372
GILNALA LHG I TT SIHRL+LGLLGYLIPFAPLAFVSQ SP FPISTHFTAP EIPS P +L+ SF+ + V+ L +L +HLQTLYAQ FRITLASSVLPRLLA+S
Sbjct: 56 GILNALATALHGSIRTTPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTLLQLGSFHRLSRVEPWDLTANLKSHLQTLYAQSFRITLASSVLPRLLAQS 179
BLAST of mRNA_S-ischiensis_contig110.2415.1 vs. uniprot
Match: A0A0V0H8Z9_SOLCH (Putative ovule protein n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0H8Z9_SOLCH) HSP 1 Score: 137 bits (346), Expect = 7.030e-38 Identity = 84/156 (53.85%), Postives = 92/156 (58.97%), Query Frame = 2
Query: 137 SSLSCLRHRRSFQSLRISPLHWKFPLPLSYSSLIVSITFLKLSFKL***TYQTTYRRFTPSDSG*HLHPPYYRGCWHGVSRC----------LFVK*TSELPP*QKRFTTRRPSFPHAVLLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQL 574
S + LR S Q LRISPLHW+F PL YSS V LS L Y T RFTP +S HP YYRGCWH VSRC LF + S L +K + PHAVLL QAFAHC KFPTAASRRSL RVSVPVWL+ILS+QL
Sbjct: 6 SPVGRLRCWCSSQYLRISPLHWEFLPPLPYSSCAVXSAXXXLSPGLSHXXYTTXCXRFTPXNSXXRXHPXYYRGCWHXVSRCXFXXYRHXGALFTRPISSL---RKEVYNPQTFLPHAVLLRQAFAHCGKFPTAASRRSLGRVSVPVWLLILSDQL 158 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig110.2415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig110.2415.1 >prot_S-ischiensis_contig110.2415.1 ID=prot_S-ischiensis_contig110.2415.1|Name=mRNA_S-ischiensis_contig110.2415.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=93bp MILHGLIHTTSSIHRLQLGLLGYLIPFAPLAFVSQLPSPSAVFPISTHFTback to top mRNA from alignment at S-ischiensis_contig110:114200..114830+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig110.2415.1 ID=mRNA_S-ischiensis_contig110.2415.1|Name=mRNA_S-ischiensis_contig110.2415.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=631bp|location=Sequence derived from alignment at S-ischiensis_contig110:114200..114830+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig110:114200..114830+ >mRNA_S-ischiensis_contig110.2415.1 ID=mRNA_S-ischiensis_contig110.2415.1|Name=mRNA_S-ischiensis_contig110.2415.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=558bp|location=Sequence derived from alignment at S-ischiensis_contig110:114200..114830+ (Schizocladia ischiensis KU_0333)back to top |