mRNA_S-ischiensis_contig110.2409.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig110.2409.1
Unique NamemRNA_S-ischiensis_contig110.2409.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig110.2409.1 vs. uniprot
Match: A0A7S6ZPC8_9STRA (Elongation factor Tu, chloroplastic n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A7S6ZPC8_9STRA)

HSP 1 Score: 798 bits (2062), Expect = 1.150e-291
Identity = 409/409 (100.00%), Postives = 409/409 (100.00%), Query Frame = 1
Query:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKITS 1227
            MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKITS
Sbjct:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKITS 409          
BLAST of mRNA_S-ischiensis_contig110.2409.1 vs. uniprot
Match: C6KIM9_AURAN (Elongation factor Tu, chloroplastic n=4 Tax=Pelagomonadales TaxID=54409 RepID=C6KIM9_AURAN)

HSP 1 Score: 708 bits (1827), Expect = 7.400e-256
Identity = 356/409 (87.04%), Postives = 377/409 (92.18%), Query Frame = 1
Query:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKITS 1227
            MAREKFER+KPH+NIGTIGHVDHGKTTLTAAIT TLALG   AAK YEDIDAAPEERARGITINTAHVEYET+ RHYAHVDCPGHADYVKNMITGAAQMDGAILV SAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDD ELLELVELEVRELLS YDFPGDDIP VAGSAL A+E I  + ++ +GDNKWVDKIY LMDA+DDYIPTP RD EKTFLMAIED FSITGRGTV+TGRIERG VKVGETVE+VGLG+TR T VTG+EMFQKTLEEG AGDNVG+LLRGIQK +IERGMVLA  GTITPHT FE+EVYILTKEEGGRHTPFF+GYRPQFYVRTTDVTG IK FTADDG++VEMVMPGDRIKM AELI+AIAIE+GMRFAIREGGRTIGAGVVSKI S
Sbjct:    1 MAREKFERSKPHINIGTIGHVDHGKTTLTAAITMTLALGTDGAAKNYEDIDAAPEERARGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDDELLELVELEVRELLSSYDFPGDDIPCVAGSALMAIEAINADSSVARGDNKWVDKIYGLMDAVDDYIPTPVRDTEKTFLMAIEDAFSITGRGTVSTGRIERGTVKVGETVEIVGLGDTRETTVTGIEMFQKTLEEGLAGDNVGLLLRGIQKTDIERGMVLAASGTITPHTLFEAEVYILTKEEGGRHTPFFTGYRPQFYVRTTDVTGNIKQFTADDGTEVEMVMPGDRIKMTAELISAIAIEDGMRFAIREGGRTIGAGVVSKIVS 409          
BLAST of mRNA_S-ischiensis_contig110.2409.1 vs. uniprot
Match: A0A7U0KSS9_OLILU (Elongation factor Tu n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0KSS9_OLILU)

HSP 1 Score: 699 bits (1805), Expect = 1.660e-252
Identity = 351/407 (86.24%), Postives = 373/407 (91.65%), Query Frame = 1
Query:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAREKFER KPHVNIGTIGHVDHGKTTLTAAITATL++     AKKY+DID+APEERARGITINTAHVEYET+ RHYAHVDCPGHADY+KNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDD ELLELVELEVRELLS YDFPGDDIP VAGSAL ALE IT  P  K GDNKWVDKI+ LM+A+DDYIPTP+RD+++TFLMA+EDVFSITGRGTVATGRIERG VKVG T+ELVGL  TR+T VTG+EMFQKTLEEGFAGDNVGILLRGI K +IERGMV+A PGTITPHT FE+EVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQI  FT+DDG  VEMVMPGDRIKM AELI  IAIEEGMRFAIREGG+TIGAGVVSKI
Sbjct:    1 MAREKFERNKPHVNIGTIGHVDHGKTTLTAAITATLSIASGGIAKKYDDIDSAPEERARGITINTAHVEYETETRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDEELLELVELEVRELLSSYDFPGDDIPCVAGSALLALEHITANPTTKIGDNKWVDKIFKLMEAVDDYIPTPQRDVDRTFLMAVEDVFSITGRGTVATGRIERGSVKVGGTIELVGLRETRTTTVTGLEMFQKTLEEGFAGDNVGILLRGITKGDIERGMVIAAPGTITPHTKFEAEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQILQFTSDDGDAVEMVMPGDRIKMTAELICPIAIEEGMRFAIREGGKTIGAGVVSKI 407          
BLAST of mRNA_S-ischiensis_contig110.2409.1 vs. uniprot
Match: EFTU_THAPS (Elongation factor Tu, chloroplastic n=94 Tax=Sar TaxID=2698737 RepID=EFTU_THAPS)

HSP 1 Score: 698 bits (1802), Expect = 4.760e-252
Identity = 346/407 (85.01%), Postives = 379/407 (93.12%), Query Frame = 1
Query:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLA  G + AK Y DID APEERARGITINTAHVEYET  RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILL+KQVGVPHIVVFLNK+DQVDD ELLELVELEVRELLS YDFPGDDIPI  GSALQA+E +++ P++K+GDN WVDKI++LMDA+D YIPTP+RD+EKTFLMAIEDVFSITGRGTVATGRIERGVVKVG+ VE+VG+G+T++T +TG+EMFQKTLEEGFAGDNVGILLRG+ +  IERGMVL++PGTITPHT+FESEVY+LTKEEGGRHTPFF+GYRPQFYVRTTDVTG I+ FTADDG+ VEMVMPGDRIKM AELI  +AIEEGMRFAIREGGRTIGAGVVSKI
Sbjct:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLATAGGAVAKDYSDIDGAPEERARGITINTAHVEYETADRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPHIVVFLNKQDQVDDDELLELVELEVRELLSTYDFPGDDIPICPGSALQAIEALSSNPDVKRGDNPWVDKIFALMDAVDAYIPTPERDVEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGDNVEIVGVGDTQTTTITGIEMFQKTLEEGFAGDNVGILLRGVTRENIERGMVLSKPGTITPHTNFESEVYVLTKEEGGRHTPFFTGYRPQFYVRTTDVTGSIEQFTADDGTIVEMVMPGDRIKMTAELIYPVAIEEGMRFAIREGGRTIGAGVVSKI 407          
BLAST of mRNA_S-ischiensis_contig110.2409.1 vs. uniprot
Match: B2XTC8_HETAK (Elongation factor Tu, chloroplastic n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTC8_HETAK)

HSP 1 Score: 696 bits (1797), Expect = 2.650e-251
Identity = 347/407 (85.26%), Postives = 376/407 (92.38%), Query Frame = 1
Query:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAREKFER KPHVNIGTIGHVDHGKTTLTAAITATL+LGG++  K YEDIDAAPEERARGITINTAHVEYETD RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILL+KQVGVPHIVVFLNKEDQVDD ELL LVELEVR+LLS+YDFPGDDIP + GSALQAL+ I     +KKG+NKWVDKIY LM+A+D+YIP P+RD++KTFLMA+EDVFSITGRGTVATGRIERGVVKVGETV++VGL  TR T VTG+EMFQKTL+EG AGDNVGILLRG+QK +IERGMVLA+PGTI PHT+FESEVYIL KEEGGRHTPFF+GYRPQFYVRTTDVTG+I  FTADDGS VEMV+PGDRIKM AELI+ IAIE GMRFAIREGGRTIGAGVVSKI
Sbjct:    1 MAREKFERNKPHVNIGTIGHVDHGKTTLTAAITATLSLGGTAQLKNYEDIDAAPEERARGITINTAHVEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPHIVVFLNKEDQVDDEELLGLVELEVRDLLSNYDFPGDDIPCIPGSALQALQAIQENNTIKKGENKWVDKIYQLMEAVDEYIPAPERDVDKTFLMAVEDVFSITGRGTVATGRIERGVVKVGETVQIVGLSETRETTVTGIEMFQKTLDEGMAGDNVGILLRGVQKEDIERGMVLAKPGTINPHTNFESEVYILRKEEGGRHTPFFAGYRPQFYVRTTDVTGKISQFTADDGSIVEMVVPGDRIKMTAELISPIAIEAGMRFAIREGGRTIGAGVVSKI 407          
BLAST of mRNA_S-ischiensis_contig110.2409.1 vs. uniprot
Match: A0A516ZAG0_9STRA (Elongation factor Tu, chloroplastic n=4 Tax=Dictyochophyceae TaxID=39119 RepID=A0A516ZAG0_9STRA)

HSP 1 Score: 694 bits (1792), Expect = 1.590e-250
Identity = 344/407 (84.52%), Postives = 379/407 (93.12%), Query Frame = 1
Query:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAREKFER+KPHVNIGTIGHVDHGKTTLTAAITA L+  G+S  K Y DIDAAPEE+ARGITINTAHVEYET+ RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILL+KQVGVP+IVVFLNKEDQVDD EL+ELVELEVRELLS+YDFPGDDIPIV GSALQALE +   P + +GDNKWVDKI++LMD +D+YIPTP+RD EKTFLMA+EDVFSITGRGTVATGRIERG++ VG+T+E+VGLG+T++T VTGVEMFQKTL+ G AGDNVGILLRG+QK +IERGMVL++PGTITPHT FE EVYILTKEEGGRHTPFF+GYRPQFYVRTTDVTG IK+FTADDG+DVEMVMPGDRIKM AELI+AIAIE GMRFAIREGGRTIGAGVVSKI
Sbjct:    1 MAREKFERSKPHVNIGTIGHVDHGKTTLTAAITAVLSTIGNSTLKNYADIDAAPEEKARGITINTAHVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPNIVVFLNKEDQVDDEELIELVELEVRELLSNYDFPGDDIPIVPGSALQALEAVIATPAIGRGDNKWVDKIFNLMDEVDNYIPTPERDTEKTFLMAVEDVFSITGRGTVATGRIERGIINVGDTIEIVGLGDTQTTTVTGVEMFQKTLDSGMAGDNVGILLRGVQKTDIERGMVLSKPGTITPHTLFEGEVYILTKEEGGRHTPFFTGYRPQFYVRTTDVTGNIKAFTADDGTDVEMVMPGDRIKMTAELISAIAIEAGMRFAIREGGRTIGAGVVSKI 407          
BLAST of mRNA_S-ischiensis_contig110.2409.1 vs. uniprot
Match: A0A2U9NTP2_9STRA (Elongation factor Tu, chloroplastic n=1 Tax=Acanthoceras zachariasii TaxID=451788 RepID=A0A2U9NTP2_9STRA)

HSP 1 Score: 693 bits (1788), Expect = 6.450e-250
Identity = 349/407 (85.75%), Postives = 372/407 (91.40%), Query Frame = 1
Query:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAREKFER KPHVNIGTIGHVDHGKTTLTAAIT TL+L G+S AK Y DIDAAPEERARGITINTAHVEYET+ RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLS YDFPGD+IPI  GSAL A+E IT  P LK+GDN WVDKI++LMDA+D YIPTP+RDIEKTFLMAIEDVFSITGRGTV TGRIERG+VK+G+ VELVGL  T ST VTG+EMFQKTLEEGFAGDNVGILLRGI +  +ERGMVLA+PGTITPHT+FESEVY+LTKEEGGRHTPFFSGYRPQFYVRTTDVTG I  FT+D+G  VEMVMPGDRIKM  ELI  +AIE+GMRFAIREGGRTIGAGVVSKI
Sbjct:    1 MAREKFERKKPHVNIGTIGHVDHGKTTLTAAITTTLSLIGTSVAKGYADIDAAPEERARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSTYDFPGDEIPICPGSALLAIEAITANPKLKRGDNPWVDKIFALMDAVDAYIPTPERDIEKTFLMAIEDVFSITGRGTVVTGRIERGIVKIGDNVELVGLRQTLSTTVTGIEMFQKTLEEGFAGDNVGILLRGITRENVERGMVLAKPGTITPHTNFESEVYVLTKEEGGRHTPFFSGYRPQFYVRTTDVTGSITQFTSDEGVAVEMVMPGDRIKMTVELIYPVAIEDGMRFAIREGGRTIGAGVVSKI 407          
BLAST of mRNA_S-ischiensis_contig110.2409.1 vs. uniprot
Match: A0A6P1AKF6_9CYAN (Elongation factor Tu n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1AKF6_9CYAN)

HSP 1 Score: 691 bits (1784), Expect = 2.620e-249
Identity = 343/407 (84.28%), Postives = 374/407 (91.89%), Query Frame = 1
Query:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAR KFER KPHVNIGTIGHVDHGKTTLTAAIT TLA  G + AKKYEDIDAAPEE+ARGITINTAHVEY+TD RHYAHVDCPGHADYVKNMITGAAQMDG ILVVSAADGPMPQTREHILL+KQVGVP +VVFLNK+DQVDD ELLELVELEVRELLS YDFPGDDIP+VAGSAL ALE +T +PN+KKGDN+WVDKIY LMD +D+YIPTP+RD++K FLMA+EDVFSITGRGTVATGRIERG VKVGETVELVG+ +T+ST VTGVEMFQKTL+EG AGDNVG+LLRGIQK++IERGMV+A+PG+ITPHT FE+EVY+L KEEGGRHTPFF  YRPQFYVRTTDVTG I +FTADDGS  EMVMPGDRIKMN ELI  IAIE+GMRFAIREGGRTIGAGVVSKI
Sbjct:    1 MARAKFERNKPHVNIGTIGHVDHGKTTLTAAITLTLAASGKATAKKYEDIDAAPEEKARGITINTAHVEYQTDNRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLAKQVGVPSLVVFLNKQDQVDDEELLELVELEVRELLSSYDFPGDDIPVVAGSALLALEALTKDPNIKKGDNEWVDKIYELMDNVDEYIPTPERDVDKPFLMAVEDVFSITGRGTVATGRIERGKVKVGETVELVGIKDTKSTTVTGVEMFQKTLDEGMAGDNVGVLLRGIQKDQIERGMVIAKPGSITPHTEFEAEVYVLKKEEGGRHTPFFPNYRPQFYVRTTDVTGTITAFTADDGSPAEMVMPGDRIKMNVELINPIAIEQGMRFAIREGGRTIGAGVVSKI 407          
BLAST of mRNA_S-ischiensis_contig110.2409.1 vs. uniprot
Match: EFTU_PORPU (Elongation factor Tu, chloroplastic n=17 Tax=Bangiophyceae TaxID=2797 RepID=EFTU_PORPU)

HSP 1 Score: 690 bits (1781), Expect = 7.510e-249
Identity = 341/407 (83.78%), Postives = 378/407 (92.87%), Query Frame = 1
Query:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAR KFER KPHVNIGTIGHVDHGKTTLTAAI+ATL+  GS+AAKK+++IDAAPEE+ARGITINTAHVEYETD RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILL+KQVGVP +VVFLNKEDQVDD ELLELVELE RELLS YDFPGDDIP VAGSAL ALE +T   ++KKG++KWVDKI+SLM+A+D YIPTP+RD++KTFLMA+EDVFSITGRGTVATGRIERG++KVG+T+E+VGL  TR+T +TG+EMFQKTLEEG AGDN+GILLRG+QK +IERGMVLA+PGTITPHT FE+EVYILTKEEGGRHTPFF GYRPQFYVRTTDVTG I  FTADDG+D EMVMPGDRIKM AELI AIAIE+GMRFAIREGGRT+GAGVVSKI
Sbjct:    1 MARSKFERKKPHVNIGTIGHVDHGKTTLTAAISATLSTLGSTAAKKFDEIDAAPEEKARGITINTAHVEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPTLVVFLNKEDQVDDEELLELVELEGRELLSQYDFPGDDIPFVAGSALLALEAVTKNTSIKKGEDKWVDKIFSLMEAVDTYIPTPERDVDKTFLMAVEDVFSITGRGTVATGRIERGIIKVGDTIEIVGLRETRTTTITGLEMFQKTLEEGLAGDNIGILLRGVQKKDIERGMVLAKPGTITPHTQFEAEVYILTKEEGGRHTPFFPGYRPQFYVRTTDVTGTINQFTADDGTDAEMVMPGDRIKMTAELINAIAIEQGMRFAIREGGRTVGAGVVSKI 407          
BLAST of mRNA_S-ischiensis_contig110.2409.1 vs. uniprot
Match: B7T1V7_VAULI (Elongation factor Tu, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1V7_VAULI)

HSP 1 Score: 690 bits (1781), Expect = 7.800e-249
Identity = 348/408 (85.29%), Postives = 379/408 (92.89%), Query Frame = 1
Query:    1 MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSA-AKKYEDIDAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELVELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIYSLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERGMVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGQIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIGAGVVSKI 1221
            MAREKFER KPHVNIGTIGHVDHGKTTLTAAI+ATLALG S+A AKK+EDIDAAPEERARGITINTAHVEYET+ RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILL+KQVGVP IVVFLNKEDQVDD ELLELVELEVRELL++YDF GD IPI  GSALQAL  I    N+ KGDN+WVDKI+ LM+A+D+YIPTP RD++K FLMA+EDVFSITGRGTVATGRIERG+VKVGETVE+VGL +TR+T VTGVEMFQKTL+EG AGDNVGILLRG+QK++I+RGMVL++PGTITPH  FE EVYILTKEEGGRHTPFF+GYRPQFYVRTTDVTGQIK FTADDGS+VEMVMPGDRIKMNAELI+ IAIEEG RFAIREGGRTIGAG+VSKI
Sbjct:    1 MAREKFERKKPHVNIGTIGHVDHGKTTLTAAISATLALGSSNAVAKKFEDIDAAPEERARGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPSIVVFLNKEDQVDDVELLELVELEVRELLNNYDFSGDTIPICPGSALQALNAILANSNINKGDNEWVDKIFKLMNAVDEYIPTPVRDVDKAFLMAVEDVFSITGRGTVATGRIERGIVKVGETVEIVGLLDTRTTTVTGVEMFQKTLDEGLAGDNVGILLRGVQKDDIQRGMVLSKPGTITPHKGFEGEVYILTKEEGGRHTPFFAGYRPQFYVRTTDVTGQIKFFTADDGSNVEMVMPGDRIKMNAELISPIAIEEGSRFAIREGGRTIGAGIVSKI 408          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig110.2409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6ZPC8_9STRA1.150e-291100.00Elongation factor Tu, chloroplastic n=2 Tax=Strame... [more]
C6KIM9_AURAN7.400e-25687.04Elongation factor Tu, chloroplastic n=4 Tax=Pelago... [more]
A0A7U0KSS9_OLILU1.660e-25286.24Elongation factor Tu n=1 Tax=Olisthodiscus luteus ... [more]
EFTU_THAPS4.760e-25285.01Elongation factor Tu, chloroplastic n=94 Tax=Sar T... [more]
B2XTC8_HETAK2.650e-25185.26Elongation factor Tu, chloroplastic n=4 Tax=Hetero... [more]
A0A516ZAG0_9STRA1.590e-25084.52Elongation factor Tu, chloroplastic n=4 Tax=Dictyo... [more]
A0A2U9NTP2_9STRA6.450e-25085.75Elongation factor Tu, chloroplastic n=1 Tax=Acanth... [more]
A0A6P1AKF6_9CYAN2.620e-24984.28Elongation factor Tu n=1 Tax=Kamptonema sp. SIO1D9... [more]
EFTU_PORPU7.510e-24983.78Elongation factor Tu, chloroplastic n=17 Tax=Bangi... [more]
B7T1V7_VAULI7.800e-24985.29Elongation factor Tu, chloroplastic n=1 Tax=Vauche... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig110contigS-ischiensis_contig110:79807..81036 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score713.8
Seed ortholog evalue4.7e-203
Seed eggNOG ortholog2880.D1J725
Preferred nametufA
KEGG koko:K02358
GOsGO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0009295,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009941,GO:0016020,GO:0020011,GO:0031967,GO:0031974,GO:0031975,GO:0031976,GO:0031981,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0048046,GO:0055035,GO:0070013
EggNOG free text desc.translation elongation factor activity
EggNOG OGsCOG0050@1,KOG0460@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029,ko04147
Hectar predicted targeting categoryother localisation
Exons1
Model size1230
Cds size1230
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815621.4308162-CDS-S-ischiensis_contig110:79806..810361622815621.4308162-CDS-S-ischiensis_contig110:79806..81036Schizocladia ischiensis KU_0333CDSS-ischiensis_contig110 79807..81036 +
1695739809.636391-CDS-S-ischiensis_contig110:79806..810361695739809.636391-CDS-S-ischiensis_contig110:79806..81036Schizocladia ischiensis KU_0333CDSS-ischiensis_contig110 79807..81036 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig110.2409.1prot_S-ischiensis_contig110.2409.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig110 79807..81036 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig110.2409.1

>prot_S-ischiensis_contig110.2409.1 ID=prot_S-ischiensis_contig110.2409.1|Name=mRNA_S-ischiensis_contig110.2409.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=410bp
MAREKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDI
DAAPEERARGITINTAHVEYETDIRHYAHVDCPGHADYVKNMITGAAQMD
GAILVVSAADGPMPQTREHILLSKQVGVPHIVVFLNKEDQVDDAELLELV
ELEVRELLSDYDFPGDDIPIVAGSALQALEIITTEPNLKKGDNKWVDKIY
SLMDAIDDYIPTPKRDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVG
ETVELVGLGNTRSTIVTGVEMFQKTLEEGFAGDNVGILLRGIQKNEIERG
MVLAQPGTITPHTSFESEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTG
QIKSFTADDGSDVEMVMPGDRIKMNAELIAAIAIEEGMRFAIREGGRTIG
AGVVSKITS*
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mRNA from alignment at S-ischiensis_contig110:79807..81036+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig110.2409.1 ID=mRNA_S-ischiensis_contig110.2409.1|Name=mRNA_S-ischiensis_contig110.2409.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1230bp|location=Sequence derived from alignment at S-ischiensis_contig110:79807..81036+ (Schizocladia ischiensis KU_0333)
ATGGCTCGTGAAAAATTTGAACGTACAAAACCCCATGTTAACATTGGAAC AATTGGGCATGTTGATCATGGTAAAACAACATTAACAGCCGCTATAACTG CAACGTTAGCATTAGGAGGATCTTCGGCAGCTAAAAAATATGAAGATATT GATGCTGCTCCAGAAGAACGTGCAAGAGGAATTACAATAAATACCGCACA TGTTGAATATGAAACAGATATAAGACATTATGCTCATGTGGATTGTCCCG GACATGCTGACTATGTAAAAAATATGATTACTGGAGCGGCTCAAATGGAT GGTGCTATATTAGTTGTTTCAGCGGCAGATGGACCTATGCCTCAAACGCG CGAACATATACTACTTTCAAAACAAGTTGGAGTACCACACATTGTAGTCT TCTTAAATAAAGAAGATCAAGTAGATGATGCTGAATTATTAGAATTAGTT GAATTAGAAGTACGAGAACTTTTATCAGACTATGATTTTCCTGGCGATGA TATTCCTATTGTAGCAGGTTCTGCTTTACAAGCCTTAGAAATAATTACTA CAGAGCCAAATCTAAAAAAAGGTGATAACAAATGGGTTGATAAAATTTAT TCTTTGATGGATGCTATCGATGATTATATTCCGACGCCTAAACGTGATAT AGAAAAAACATTTTTAATGGCTATAGAAGACGTTTTTTCAATTACTGGCC GAGGAACCGTAGCAACTGGTAGAATTGAACGTGGAGTTGTTAAAGTAGGA GAAACTGTTGAATTAGTTGGTCTTGGAAATACACGTTCAACAATTGTGAC AGGTGTCGAAATGTTCCAAAAAACATTGGAAGAAGGTTTTGCTGGAGATA ATGTTGGTATTTTATTACGAGGAATTCAAAAAAATGAAATTGAACGAGGT ATGGTATTAGCACAACCTGGTACTATTACCCCTCACACTAGTTTTGAATC TGAAGTATATATTCTCACAAAAGAAGAAGGTGGTCGTCATACCCCTTTCT TTTCAGGTTATCGTCCACAGTTCTATGTTAGAACAACCGATGTTACAGGT CAAATCAAAAGTTTTACGGCCGATGATGGTTCAGATGTAGAAATGGTAAT GCCAGGTGATAGAATTAAAATGAATGCTGAATTAATAGCGGCGATTGCAA TTGAGGAAGGTATGCGCTTTGCTATTCGTGAGGGCGGTCGTACTATTGGT GCAGGGGTAGTCTCTAAAATTACTTCTTAA
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Coding sequence (CDS) from alignment at S-ischiensis_contig110:79807..81036+

>mRNA_S-ischiensis_contig110.2409.1 ID=mRNA_S-ischiensis_contig110.2409.1|Name=mRNA_S-ischiensis_contig110.2409.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2460bp|location=Sequence derived from alignment at S-ischiensis_contig110:79807..81036+ (Schizocladia ischiensis KU_0333)
ATGGCTCGTGAAAAATTTGAACGTACAAAACCCCATGTTAACATTGGAAC
AATTGGGCATGTTGATCATGGTAAAACAACATTAACAGCCGCTATAACTG
CAACGTTAGCATTAGGAGGATCTTCGGCAGCTAAAAAATATGAAGATATT
GATGCTGCTCCAGAAGAACGTGCAAGAGGAATTACAATAAATACCGCACA
TGTTGAATATGAAACAGATATAAGACATTATGCTCATGTGGATTGTCCCG
GACATGCTGACTATGTAAAAAATATGATTACTGGAGCGGCTCAAATGGAT
GGTGCTATATTAGTTGTTTCAGCGGCAGATGGACCTATGCCTCAAACGCG
CGAACATATACTACTTTCAAAACAAGTTGGAGTACCACACATTGTAGTCT
TCTTAAATAAAGAAGATCAAGTAGATGATGCTGAATTATTAGAATTAGTT
GAATTAGAAGTACGAGAACTTTTATCAGACTATGATTTTCCTGGCGATGA
TATTCCTATTGTAGCAGGTTCTGCTTTACAAGCCTTAGAAATAATTACTA
CAGAGCCAAATCTAAAAAAAGGTGATAACAAATGGGTTGATAAAATTTAT
TCTTTGATGGATGCTATCGATGATTATATTCCGACGCCTAAACGTGATAT
AGAAAAAACATTTTTAATGGCTATAGAAGACGTTTTTTCAATTACTGGCC
GAGGAACCGTAGCAACTGGTAGAATTGAACGTGGAGTTGTTAAAGTAGGA
GAAACTGTTGAATTAGTTGGTCTTGGAAATACACGTTCAACAATTGTGAC
AGGTGTCGAAATGTTCCAAAAAACATTGGAAGAAGGTTTTGCTGGAGATA
ATGTTGGTATTTTATTACGAGGAATTCAAAAAAATGAAATTGAACGAGGT
ATGGTATTAGCACAACCTGGTACTATTACCCCTCACACTAGTTTTGAATC
TGAAGTATATATTCTCACAAAAGAAGAAGGTGGTCGTCATACCCCTTTCT
TTTCAGGTTATCGTCCACAGTTCTATGTTAGAACAACCGATGTTACAGGT
CAAATCAAAAGTTTTACGGCCGATGATGGTTCAGATGTAGAAATGGTAAT
GCCAGGTGATAGAATTAAAATGAATGCTGAATTAATAGCGGCGATTGCAA
TTGAGGAAGGTATGCGCTTTGCTATTCGTGAGGGCGGTCGTACTATTGGT
GCAGGGGTAGTCTCTAAAATTACTTCTTAAATGGCTCGTGAAAAATTTGA
ACGTACAAAACCCCATGTTAACATTGGAACAATTGGGCATGTTGATCATG
GTAAAACAACATTAACAGCCGCTATAACTGCAACGTTAGCATTAGGAGGA
TCTTCGGCAGCTAAAAAATATGAAGATATTGATGCTGCTCCAGAAGAACG
TGCAAGAGGAATTACAATAAATACCGCACATGTTGAATATGAAACAGATA
TAAGACATTATGCTCATGTGGATTGTCCCGGACATGCTGACTATGTAAAA
AATATGATTACTGGAGCGGCTCAAATGGATGGTGCTATATTAGTTGTTTC
AGCGGCAGATGGACCTATGCCTCAAACGCGCGAACATATACTACTTTCAA
AACAAGTTGGAGTACCACACATTGTAGTCTTCTTAAATAAAGAAGATCAA
GTAGATGATGCTGAATTATTAGAATTAGTTGAATTAGAAGTACGAGAACT
TTTATCAGACTATGATTTTCCTGGCGATGATATTCCTATTGTAGCAGGTT
CTGCTTTACAAGCCTTAGAAATAATTACTACAGAGCCAAATCTAAAAAAA
GGTGATAACAAATGGGTTGATAAAATTTATTCTTTGATGGATGCTATCGA
TGATTATATTCCGACGCCTAAACGTGATATAGAAAAAACATTTTTAATGG
CTATAGAAGACGTTTTTTCAATTACTGGCCGAGGAACCGTAGCAACTGGT
AGAATTGAACGTGGAGTTGTTAAAGTAGGAGAAACTGTTGAATTAGTTGG
TCTTGGAAATACACGTTCAACAATTGTGACAGGTGTCGAAATGTTCCAAA
AAACATTGGAAGAAGGTTTTGCTGGAGATAATGTTGGTATTTTATTACGA
GGAATTCAAAAAAATGAAATTGAACGAGGTATGGTATTAGCACAACCTGG
TACTATTACCCCTCACACTAGTTTTGAATCTGAAGTATATATTCTCACAA
AAGAAGAAGGTGGTCGTCATACCCCTTTCTTTTCAGGTTATCGTCCACAG
TTCTATGTTAGAACAACCGATGTTACAGGTCAAATCAAAAGTTTTACGGC
CGATGATGGTTCAGATGTAGAAATGGTAATGCCAGGTGATAGAATTAAAA
TGAATGCTGAATTAATAGCGGCGATTGCAATTGAGGAAGGTATGCGCTTT
GCTATTCGTGAGGGCGGTCGTACTATTGGTGCAGGGGTAGTCTCTAAAAT
TACTTCTTAA
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