mRNA_S-ischiensis_contig110.2397.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig110.2397.1
Unique NamemRNA_S-ischiensis_contig110.2397.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig110.2397.1 vs. uniprot
Match: A0A7S6ZPA3_9STRA (Thiazole synthase n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPA3_9STRA)

HSP 1 Score: 519 bits (1336), Expect = 6.490e-185
Identity = 268/269 (99.63%), Postives = 269/269 (100.00%), Query Frame = 3 
Query:   30 INIEDPINIAGKTFESRLIVGTGRYKDSYDAYSTIRNSGCEIVTLAVGRIKIGKKNSIEEELIDILDWKKLWILPNTAGARTAEEAIKLALLGRELTKQIGQPENNFVKLEVISDSQYLLPDPIGTLNAATFLIKKGFIVLPYINADPILAEHLQDIGCSSIMPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGASAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGRAPRFEGGYASPTSIKDIDLY 836
            +NIEDPINIAGKTFESRLIVGTGRYKDSYDAYSTIRNSGCEIVTLAVGRIKIGKKNSIEEELIDILDWKKLWILPNTAGARTAEEAIKLALLGRELTKQIGQPENNFVKLEVISDSQYLLPDPIGTLNAATFLIKKGFIVLPYINADPILAEHLQDIGCSSIMPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGASAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGRAPRFEGGYASPTSIKDIDLY
Sbjct:    1 MNIEDPINIAGKTFESRLIVGTGRYKDSYDAYSTIRNSGCEIVTLAVGRIKIGKKNSIEEELIDILDWKKLWILPNTAGARTAEEAIKLALLGRELTKQIGQPENNFVKLEVISDSQYLLPDPIGTLNAATFLIKKGFIVLPYINADPILAEHLQDIGCSSIMPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGASAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGRAPRFEGGYASPTSIKDIDLY 269
[Close]
BLAST of mRNA_S-ischiensis_contig110.2397.1 vs. uniprot
Match: A0A2U9NRQ1_9STRA (Thiazole synthase n=1 Tax=Psammoneis obaidii TaxID=1706219 RepID=A0A2U9NRQ1_9STRA)

HSP 1 Score: 326 bits (836), Expect = 7.630e-109
Identity = 165/258 (63.95%), Postives = 210/258 (81.40%), Query Frame = 3 
Query:   42 DPINIAGKTFESRLIVGTGRYKDSYDAYSTIRNSGCEIVTLAVGRIKIGKKNSIEEELIDILDWKKLWILPNTAGARTAEEAIKLALLGRELTKQIGQPENNFVKLEVISDSQYLLPDPIGTLNAATFLIKKGFIVLPYINADPILAEHLQDIGCSSIMPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGASAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGRAPRFEGGYASPTS 815
            D + I  K+F SRL++GTG+Y++ +DA ++I NS CEIVT+A+ R+ I  KN      +  LDWKKLW+LPNTAG++TAEEAI++A LG EL  Q+GQ EN FVKLEVISD +YLLPDPIGTL AA FLIKKGF VLPYINADP+LA HL+D+GC ++MPLGSPIGSGQGI NL+NI+III+ S VP+I+DAGIGT S+AT+A+E+GA AVL+NTA+A+++NP  MA AMNLAVK+GR AYL+GR  +    YA+P+S
Sbjct:    6 DKLKIGEKSFNSRLMLGTGKYRNIHDATNSIENSECEIVTVAIRRLPIDLKND-NINFLKYLDWKKLWLLPNTAGSQTAEEAIRMAFLGHELACQLGQEENFFVKLEVISDPKYLLPDPIGTLKAAEFLIKKGFTVLPYINADPMLALHLEDLGCKTVMPLGSPIGSGQGITNLTNIQIIIENSSVPVIVDAGIGTPSEATIAMELGADAVLLNTAVAQSNNPAQMAYAMNLAVKSGRLAYLSGRMEKKY--YANPSS 260
[Close]
BLAST of mRNA_S-ischiensis_contig110.2397.1 vs. uniprot
Match: A0A0R6M3D2_UNDPI (Thiazole synthase n=30 Tax=Laminariales TaxID=2886 RepID=A0A0R6M3D2_UNDPI)

HSP 1 Score: 324 bits (831), Expect = 4.850e-108
Identity = 164/264 (62.12%), Postives = 212/264 (80.30%), Query Frame = 3 
Query:   39 EDPINIAGKTFESRLIVGTGRYKDSYDAYSTIRNSGCEIVTLAVGRIKIGKKNSIEEELIDILDWKKLWILPNTAGARTAEEAIKLALLGRELTKQIGQPENNFVKLEVISDSQYLLPDPIGTLNAATFLIKKGFIVLPYINADPILAEHLQDIGCSSIMPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGASAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGRAPRFEGGYASPTSIKDID 830
            ED + I GK F SRLI+GTG+YK   D    +  S  EIVT+A+ R+ +    S  + LI  ++WKKLW+LPNTAGA+TAEEAI+LA LGREL+K+IGQ ENNF+KLEVISD +YL PDPIGTL AA FL+KKGFIVLPY N DP+LA+HL+DIGCS+IMPLGSPIGSGQGI++++NI+III+ SK+P+IIDAGIG+ S+A LA+E+GA AVLINTA+A+A N  +MA+AMNLAV+AGR++YLAG+   ++   +S + +K  D
Sbjct:    4 EDQLTIGGKVFNSRLIIGTGKYKSLKDMVECLAKSESEIVTVAIRRLNL-LNISRNDNLITSINWKKLWLLPNTAGAKTAEEAIRLAFLGRELSKRIGQKENNFIKLEVISDPKYLFPDPIGTLKAADFLVKKGFIVLPYTNTDPMLAKHLEDIGCSTIMPLGSPIGSGQGIQSINNIQIIIENSKIPVIIDAGIGSPSEAALAMELGAEAVLINTAIAQAKNSIIMAKAMNLAVQAGRQSYLAGQMVPYKFAQSS-SPLKGSD 265
[Close]
BLAST of mRNA_S-ischiensis_contig110.2397.1 vs. uniprot
Match: A0A4D6WJW2_9FLOR (Thiazole synthase n=1 Tax=Antithamnionella ternifolia TaxID=207919 RepID=A0A4D6WJW2_9FLOR)

HSP 1 Score: 323 bits (827), Expect = 2.760e-107
Identity = 164/261 (62.84%), Postives = 210/261 (80.46%), Query Frame = 3 
Query:   36 IEDPINIAGKTFESRLIVGTGRYKDSYDAYSTIRNSGCEIVTLAVGRIKIGKKNSIEEELIDILDWKKLWILPNTAGARTAEEAIKLALLGRELTKQIGQPENNFVKLEVISDSQYLLPDPIGTLNAATFLIKKGFIVLPYINADPILAEHLQDIGCSSIMPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGASAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGRAPRFEGGYASPTSI 818
            + D  NIA   F SRL++GTG+YK+ Y+A  +I  S   IVT+A+ R +  K N  +  LID L+WKKLW+LPNTAG + AEEAI++A LGRE+TK++GQ +NNF+KLEVISDSQYLLPDPIGTL AA +LI K F VLPYINADPILA+HL++IGCS+IMPLGSPIGSGQG++N  N++III+ SK+PIIIDAGIGT+SDA+ A+EMGASAVL+NTA+A+A +P +MAQAM L+V +GR +YLAGR  + +   AS  S+
Sbjct:   16 LNDLFNIANHNFSSRLMLGTGKYKNLYEAQKSIEASQASIVTVAIRRAQFAKNNG-KSNLIDGLNWKKLWLLPNTAGCQNAEEAIRIAQLGREITKKLGQIDNNFIKLEVISDSQYLLPDPIGTLKAAEYLINKNFNVLPYINADPILAKHLEEIGCSTIMPLGSPIGSGQGLQNQCNLQIIIENSKIPIIIDAGIGTASDASQAMEMGASAVLLNTAIAEAKSPILMAQAMKLSVISGRYSYLAGRMQQNKHAIASSPSL 275
[Close]
BLAST of mRNA_S-ischiensis_contig110.2397.1 vs. uniprot
Match: A0A8F0JZ03_9PHAE (Thiazole synthase n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZ03_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 2.980e-107
Identity = 160/256 (62.50%), Postives = 208/256 (81.25%), Query Frame = 3 
Query:   39 EDPINIAGKTFESRLIVGTGRYKDSYDAYSTIRNSGCEIVTLAVGRIKIGKKNSIEEELIDILDWKKLWILPNTAGARTAEEAIKLALLGRELTKQIGQPENNFVKLEVISDSQYLLPDPIGTLNAATFLIKKGFIVLPYINADPILAEHLQDIGCSSIMPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGASAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGRAPRFEGGYAS 806
            +D + IA K F+SRLI+GTG+YK   D    ++NS  E+VT+AV R+ +   +   E LI  +DWKK W+LPNTAGA+T EEAI+LA LGREL+K++GQ ENNF+KLEVISD +YL PDPIGTL AA FL+KKGFIVLPY N DP+LA+HL+DIGCS+IMPLGSPIGSGQGI+N++NI+III+ SK+P+IIDAGIG+ S+A  A+E+GA AVLINTA+A+A + + MA+AMNLAV+AGR+AYLAG+   ++   +S
Sbjct:    4 KDKLVIANKVFDSRLIIGTGKYKTLKDMEECLKNSESEMVTVAVRRLDLATISK-NENLITAIDWKKFWLLPNTAGAKTTEEAIRLAFLGRELSKRVGQKENNFIKLEVISDPKYLFPDPIGTLKAAEFLVKKGFIVLPYTNTDPMLAKHLEDIGCSTIMPLGSPIGSGQGIQNINNIQIIIENSKIPVIIDAGIGSPSEAAFAMELGADAVLINTAIAQAKDSKRMAKAMNLAVQAGRQAYLAGKMISYQFAQSS 258
[Close]
BLAST of mRNA_S-ischiensis_contig110.2397.1 vs. uniprot
Match: A0A8F0F9P9_9PHAE (Thiazole synthase n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9P9_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 2.980e-107
Identity = 165/264 (62.50%), Postives = 209/264 (79.17%), Query Frame = 3 
Query:   39 EDPINIAGKTFESRLIVGTGRYKDSYDAYSTIRNSGCEIVTLAVGRIKIGKKNSIEEELIDILDWKKLWILPNTAGARTAEEAIKLALLGRELTKQIGQPENNFVKLEVISDSQYLLPDPIGTLNAATFLIKKGFIVLPYINADPILAEHLQDIGCSSIMPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGASAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGRAPRFEGGYASPTSIKDID 830
            +D + I GK F SRLI+GTG+YK+  D    ++ S  EIVT+AV R  +    S E  LI  +DWK  W+LPNTAGA+T EEAI+LA LGREL+K+IGQ ENNFVKLEVISD +YL PDPIGTL AA FL+KKGFIVLPY N DP+LA+HL+D+GCS+IMPLGSPIGSGQGI+N++NI+III+ SK+P+IIDAGIG+ S+A+LA+E+GA AVLINTA+A+A N   MA+AM LAV+AGR+AYLAGR   ++   +S + +K  D
Sbjct:    4 KDKLIIGGKVFSSRLIIGTGKYKNLRDMVGCLKTSESEIVTVAVRRFNL-LNMSKENNLITSIDWKNFWLLPNTAGAKTTEEAIRLAFLGRELSKRIGQEENNFVKLEVISDPKYLFPDPIGTLKAAEFLVKKGFIVLPYTNTDPMLAKHLEDVGCSTIMPLGSPIGSGQGIQNINNIQIIIENSKIPVIIDAGIGSPSEASLAMELGAQAVLINTAIAQAKNSIFMAKAMKLAVQAGRQAYLAGRIVPYKFAQSS-SPLKGSD 265
[Close]
BLAST of mRNA_S-ischiensis_contig110.2397.1 vs. uniprot
Match: A0A023JER2_9STRA (Thiazole synthase n=1 Tax=Eunotia naegelii TaxID=1458866 RepID=A0A023JER2_9STRA)

HSP 1 Score: 322 bits (824), Expect = 5.050e-107
Identity = 165/258 (63.95%), Postives = 206/258 (79.84%), Query Frame = 3 
Query:   42 DPINIAGKTFESRLIVGTGRYKDSYDAYSTIRNSGCEIVTLAVGRIKIGKKNSIEEELIDILDWKKLWILPNTAGARTAEEAIKLALLGRELTKQIGQPENNFVKLEVISDSQYLLPDPIGTLNAATFLIKKGFIVLPYINADPILAEHLQDIGCSSIMPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGASAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGRAPRFEGGYASPTS 815
            D + I  K F SRL++GTG+YK S DA ++I+NS CEIVT+AV R+    KN     L D LDWKKLW+LPNTAG++TAEEAI++A LG EL  QIGQ  N FVKLEVISD +YLLPDPIGTL AA FL+KKGF VLPYINADPILA HL+D+GC+++MPLGSPIGSGQG+ NL+NI+III+ + +P+I+DAGIGT S+AT+A+E+GA  VL+NTA+A++ NP  MA AMNL V+AGR AYLAGR  +    YA+P+S
Sbjct:    6 DRLKIGDKFFNSRLMLGTGKYKKSVDAINSIKNSECEIVTVAVRRLPTNLKNDNISFLND-LDWKKLWLLPNTAGSQTAEEAIRMAFLGHELACQIGQENNFFVKLEVISDPKYLLPDPIGTLKAAEFLVKKGFTVLPYINADPILALHLEDLGCATVMPLGSPIGSGQGLNNLANIQIIIENATIPVIVDAGIGTPSEATIAMELGADGVLLNTAVAQSKNPGQMAYAMNLGVQAGRLAYLAGRMEKKY--YANPSS 260
[Close]
BLAST of mRNA_S-ischiensis_contig110.2397.1 vs. uniprot
Match: A0A8A6KMF1_9STRA (Thiazole synthase n=1 Tax=Coscinodiscus granii TaxID=265552 RepID=A0A8A6KMF1_9STRA)

HSP 1 Score: 322 bits (824), Expect = 5.410e-107
Identity = 163/258 (63.18%), Postives = 206/258 (79.84%), Query Frame = 3 
Query:   42 DPINIAGKTFESRLIVGTGRYKDSYDAYSTIRNSGCEIVTLAVGRIKIGKKNSIEEELIDILDWKKLWILPNTAGARTAEEAIKLALLGRELTKQIGQPENNFVKLEVISDSQYLLPDPIGTLNAATFLIKKGFIVLPYINADPILAEHLQDIGCSSIMPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGASAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGRAPRFEGGYASPTS 815
            D + I  KTF SRL+VGTG+YK +  A  +I  S CEIVT+A+ R+ I  K       ++ LDW+ LW+LPNTAG++TAEEAI++A LG EL  ++GQ  N FVKLEVISD +YLLPDP+GTL AA FLIKKGF VLPYINADPILA HL+D+GC+++MPLGSPIGSGQG+KNLSNI+III+ S +P+I+DAGIGT+SDAT A+E+GA  VL+NTA+A++ NPQ MA AM+L+VKAGR AYLAGR  + +  YASP+S
Sbjct:    6 DILKIGDKTFTSRLMVGTGKYKTANHAIQSIEKSQCEIVTVAIRRLPIKLKKDTTS-FLNYLDWRNLWLLPNTAGSQTAEEAIRIAFLGHELACRLGQENNFFVKLEVISDPKYLLPDPLGTLKAAEFLIKKGFTVLPYINADPILALHLEDLGCATVMPLGSPIGSGQGLKNLSNIQIIIENSNIPVIVDAGIGTASDATQAMELGADGVLLNTAIAQSKNPQKMAAAMDLSVKAGRLAYLAGRMEKKQ--YASPSS 260
[Close]
BLAST of mRNA_S-ischiensis_contig110.2397.1 vs. uniprot
Match: A0A1I9LVS6_9PHAE (Thiazole synthase n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVS6_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 7.670e-107
Identity = 162/246 (65.85%), Postives = 202/246 (82.11%), Query Frame = 3 
Query:   39 EDPINIAGKTFESRLIVGTGRYKDSYDAYSTIRNSGCEIVTLAVGRIKIGKKNSIEEELIDILDWKKLWILPNTAGARTAEEAIKLALLGRELTKQIGQPENNFVKLEVISDSQYLLPDPIGTLNAATFLIKKGFIVLPYINADPILAEHLQDIGCSSIMPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGASAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGR 776
            +D + I GKTF SRLI+GTG+YK+  +    +  S  EIVT+A+ R+ I    S  + LI  +DWKK W+LPNTAGA+T +EAI+LA LGREL+K+IGQ ENNF+KLEVISDS+YL PDPIGTL AA FL+KKGFIVLPYIN+DP+LA+HL+DIGC+++MPLGSPIGSGQGI+NL+NI+III+ S VP+IIDAGI + SDA  ALE+GA AVLINTA+AKA N   MA AMNLAV+AGR++YLAG+
Sbjct:    6 QDKLIIGGKTFNSRLIIGTGKYKNLKEMVQCLAKSESEIVTVAIRRLNI-LDISKNDNLITAIDWKKFWLLPNTAGAKTTDEAIRLAFLGRELSKRIGQKENNFIKLEVISDSKYLFPDPIGTLKAAEFLVKKGFIVLPYINSDPMLAKHLEDIGCATVMPLGSPIGSGQGIQNLNNIQIIIENSTVPVIIDAGIRSPSDAAFALEIGAEAVLINTAIAKAKNSIAMANAMNLAVQAGRQSYLAGQ 250
[Close]
BLAST of mRNA_S-ischiensis_contig110.2397.1 vs. uniprot
Match: A0A8F0F7P5_9PHAE (Thiazole synthase n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7P5_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 2.260e-106
Identity = 157/246 (63.82%), Postives = 202/246 (82.11%), Query Frame = 3 
Query:   39 EDPINIAGKTFESRLIVGTGRYKDSYDAYSTIRNSGCEIVTLAVGRIKIGKKNSIEEELIDILDWKKLWILPNTAGARTAEEAIKLALLGRELTKQIGQPENNFVKLEVISDSQYLLPDPIGTLNAATFLIKKGFIVLPYINADPILAEHLQDIGCSSIMPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGASAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGR 776
            EDP+ I GK F SRLIVGTG+YK+  D    +  S  EIVT+AV R+ +    S +  L+  ++W+ LW+LPNTAGA+T EEAI+LA LGREL+K+IGQ ENNF+KLEVISD +YL PDPIGTL AA FL+KKGFIVLPY N DP+LA+HL+D+GC++IMPLGSPIGSGQGI+N++NI+III+ SK+P+I+DAGIG+ S+A+LA+E+GA AVLINTA+A+A N  +MA+AMN  VKAGR+AYL G+
Sbjct:    4 EDPLTIGGKVFNSRLIVGTGKYKNLKDMVECLAKSESEIVTVAVRRLNL-LNLSKDNNLMTAINWENLWLLPNTAGAKTTEEAIRLAFLGRELSKRIGQRENNFIKLEVISDPKYLFPDPIGTLKAAEFLVKKGFIVLPYTNTDPMLAKHLEDVGCATIMPLGSPIGSGQGIQNINNIQIIIENSKIPVIVDAGIGSPSEASLAMELGAEAVLINTAIAQAKNSVLMAEAMNFGVKAGRQAYLGGQ 248
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig110.2397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6ZPA3_9STRA6.490e-18599.63Thiazole synthase n=1 Tax=Schizocladia ischiensis ... [more]
A0A2U9NRQ1_9STRA7.630e-10963.95Thiazole synthase n=1 Tax=Psammoneis obaidii TaxID... [more]
A0A0R6M3D2_UNDPI4.850e-10862.12Thiazole synthase n=30 Tax=Laminariales TaxID=2886... [more]
A0A4D6WJW2_9FLOR2.760e-10762.84Thiazole synthase n=1 Tax=Antithamnionella ternifo... [more]
A0A8F0JZ03_9PHAE2.980e-10762.50Thiazole synthase n=1 Tax=Desmarestia aculeata Tax... [more]
A0A8F0F9P9_9PHAE2.980e-10762.50Thiazole synthase n=1 Tax=Chorda asiatica TaxID=12... [more]
A0A023JER2_9STRA5.050e-10763.95Thiazole synthase n=1 Tax=Eunotia naegelii TaxID=1... [more]
A0A8A6KMF1_9STRA5.410e-10763.18Thiazole synthase n=1 Tax=Coscinodiscus granii Tax... [more]
A0A1I9LVS6_9PHAE7.670e-10765.85Thiazole synthase n=1 Tax=Pleurocladia lacustris T... [more]
A0A8F0F7P5_9PHAE2.260e-10663.82Thiazole synthase n=2 Tax=Laminariales TaxID=2886 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig110contigS-ischiensis_contig110:25656..26609 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score124.8
Seed ortholog evalue2.5e-26
Seed eggNOG ortholog1487953.JMKF01000044_gene2986
Preferred namethiG
KEGG rclassRC01788,RC03096,RC03097,RC03461
KEGG koko:K03149,ko:K03153
KEGG ReactionR07463,R10247
KEGG Pathwayko00730,ko01100,map00730,map01100
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
EggNOG OGs1FZYU@1117,1H713@1150,COG0665@1,COG0665@2,COG2022@1,COG2022@2
EC1.4.3.19,2.8.1.10
COG Functional cat.H
BiGG ReactioniECABU_c1320.ECABU_c45060,iECO26_1355.ECO26_5099,ic_1306.c4947
Best tax levelOscillatoriales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons1
Model size954
Cds size324
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig110.2397.1prot_S-ischiensis_contig110.2397.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig110 26171..26494 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815620.8838532-UTR-S-ischiensis_contig110:25655..261701622815620.8838532-UTR-S-ischiensis_contig110:25655..26170Schizocladia ischiensis KU_0333UTRS-ischiensis_contig110 25656..26170 +
1695739809.3595338-UTR-S-ischiensis_contig110:25655..261701695739809.3595338-UTR-S-ischiensis_contig110:25655..26170Schizocladia ischiensis KU_0333UTRS-ischiensis_contig110 25656..26170 +
1622815620.911482-UTR-S-ischiensis_contig110:26494..266091622815620.911482-UTR-S-ischiensis_contig110:26494..26609Schizocladia ischiensis KU_0333UTRS-ischiensis_contig110 26495..26609 +
1695739809.3859055-UTR-S-ischiensis_contig110:26494..266091695739809.3859055-UTR-S-ischiensis_contig110:26494..26609Schizocladia ischiensis KU_0333UTRS-ischiensis_contig110 26495..26609 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815620.8980823-CDS-S-ischiensis_contig110:26170..264941622815620.8980823-CDS-S-ischiensis_contig110:26170..26494Schizocladia ischiensis KU_0333CDSS-ischiensis_contig110 26171..26494 +
1695739809.3746045-CDS-S-ischiensis_contig110:26170..264941695739809.3746045-CDS-S-ischiensis_contig110:26170..26494Schizocladia ischiensis KU_0333CDSS-ischiensis_contig110 26171..26494 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig110.2397.1

>prot_S-ischiensis_contig110.2397.1 ID=prot_S-ischiensis_contig110.2397.1|Name=mRNA_S-ischiensis_contig110.2397.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=108bp
MPLGSPIGSGQGIKNLSNIEIIIQKSKVPIIIDAGIGTSSDATLALEMGA
SAVLINTALAKASNPQVMAQAMNLAVKAGRKAYLAGRAPRFEGGYASPTS
IKDIDLY*
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mRNA from alignment at S-ischiensis_contig110:25656..26609+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig110.2397.1 ID=mRNA_S-ischiensis_contig110.2397.1|Name=mRNA_S-ischiensis_contig110.2397.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=954bp|location=Sequence derived from alignment at S-ischiensis_contig110:25656..26609+ (Schizocladia ischiensis KU_0333)
TGAAAACTAGTAATGGTAATAATAGAAAAATAAATATTGAAGATCCTATT
AATATTGCAGGAAAAACTTTTGAGTCACGATTAATTGTAGGAACCGGTCG
ATATAAAGATTCATATGATGCATACTCAACAATCCGAAACAGTGGATGTG
AAATAGTAACATTAGCAGTTGGTCGAATAAAAATTGGAAAAAAAAATTCT
ATCGAAGAGGAATTAATTGATATTCTTGATTGGAAAAAGTTATGGATATT
ACCAAATACTGCGGGAGCGCGAACAGCTGAGGAAGCTATTAAATTAGCTC
TTTTAGGTAGAGAATTAACAAAACAAATTGGACAACCAGAAAATAATTTT
GTTAAATTAGAAGTTATTAGTGATTCACAATATTTGTTACCAGATCCTAT
AGGGACGTTAAATGCAGCTACTTTCTTAATAAAAAAAGGATTTATTGTGT
TACCTTATATTAACGCCGATCCAATCTTAGCAGAACATCTTCAAGATATA
GGTTGTTCAAGTATAATGCCCTTGGGTTCCCCTATAGGATCGGGTCAAGG
GATCAAAAACTTATCTAATATTGAAATAATTATTCAAAAATCAAAAGTTC
CAATAATTATTGACGCTGGTATAGGAACCTCTAGCGATGCGACCTTAGCA
TTAGAAATGGGAGCTAGTGCTGTTCTAATTAATACAGCATTAGCAAAAGC
AAGTAATCCTCAAGTAATGGCCCAAGCGATGAATCTTGCAGTTAAAGCAG
GTCGAAAAGCTTATTTAGCGGGTAGAGCCCCTCGTTTTGAAGGAGGATAT
GCAAGTCCGACGTCCATTAAAGATATAGACTTGTATTGAATCTTATATTT
ATACCTGCTTCAGATTTATTTACGATATATACTATAGAGATGAAAGAGTT
TTATTTATCTAAAAACTTTAAAAAAGCCATTATAACTATGAAAAAATGTA
TTCA
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Coding sequence (CDS) from alignment at S-ischiensis_contig110:25656..26609+

>mRNA_S-ischiensis_contig110.2397.1 ID=mRNA_S-ischiensis_contig110.2397.1|Name=mRNA_S-ischiensis_contig110.2397.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=648bp|location=Sequence derived from alignment at S-ischiensis_contig110:25656..26609+ (Schizocladia ischiensis KU_0333)
ATGCCCTTGGGTTCCCCTATAGGATCGGGTCAAGGGATCAAAAACTTATC
TAATATTGAAATAATTATTCAAAAATCAAAAGTTCCAATAATTATTGACG
CTGGTATAGGAACCTCTAGCGATGCGACCTTAGCATTAGAAATGGGAGCT
AGTGCTGTTCTAATTAATACAGCATTAGCAAAAGCAAGTAATCCTCAAGT
AATGGCCCAAGCGATGAATCTTGCAGTTAAAGCAGGTCGAAAAGCTTATT
TAGCGGGTAGAGCCCCTCGTTTTGAAGGAGGATATGCAAGTCCGACGTCC
ATTAAAGATATAGACTTGTATTGAATGCCCTTGGGTTCCCCTATAGGATC
GGGTCAAGGGATCAAAAACTTATCTAATATTGAAATAATTATTCAAAAAT
CAAAAGTTCCAATAATTATTGACGCTGGTATAGGAACCTCTAGCGATGCG
ACCTTAGCATTAGAAATGGGAGCTAGTGCTGTTCTAATTAATACAGCATT
AGCAAAAGCAAGTAATCCTCAAGTAATGGCCCAAGCGATGAATCTTGCAG
TTAAAGCAGGTCGAAAAGCTTATTTAGCGGGTAGAGCCCCTCGTTTTGAA
GGAGGATATGCAAGTCCGACGTCCATTAAAGATATAGACTTGTATTGA
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