mRNA_S-ischiensis_contig11.2357.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2357.1
Unique NamemRNA_S-ischiensis_contig11.2357.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig11.2357.1 vs. uniprot
Match: D8LL60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL60_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 6.160e-92
Identity = 144/232 (62.07%), Postives = 175/232 (75.43%), Query Frame = 1 
Query:    4 AIASTSGAVGETLLGCASFMSKCDVVLASQSPRRLEIFHLMGIKDRLRVVVSDFEENLDKSAFSDAREYAKANALGKARDVARRVLSPALGQDPDPAGPLVVVGSDTIVEIGGDILEKPRDEEHAFQMLARLSGTKHLVHSGVAILTSAGGAEEPVECFCETTEVAFAALSEQDMRGYISTKEPFGKAGDYGIQGLGGQMVQGIEGCYFNVMGFPMHRFSSTMSRLIRDGKV 699
            A A  +   G TLL    FMSKCD+VLASQSPRRLEI  +MG+ DR+RVVVS+FEENLDKS+F D R+YA ANA GKAR+VA R L  A G+    A P+VVVGSDTIV++ G ILEKPRD+EHAF ML+ LSG +HLVHSGV+I TS  G ++    FCETT+V F ALS +++R YI T+EP  K+G YGIQG GGQ V+ ++GCYFNVMGFPMH FS  ++ +IRDGK 
Sbjct:   11 AAADVATTAGGTLLAQGDFMSKCDLVLASQSPRRLEIVGMMGLADRVRVVVSEFEENLDKSSFKDPRDYAIANAEGKAREVASRALLDAEGEG---AEPIVVVGSDTIVDLDGVILEKPRDDEHAFSMLSSLSGRRHLVHSGVSIFTSKLGKDKAAVSFCETTQVLFTALSAEEIRAYIRTREPMDKSGSYGIQGEGGQFVRKVDGCYFNVMGFPMHAFSRRLAEVIRDGKA 239
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BLAST of mRNA_S-ischiensis_contig11.2357.1 vs. uniprot
Match: A0A836CIZ2_9STRA (Inosine triphosphate pyrophosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ2_9STRA)

HSP 1 Score: 236 bits (602), Expect = 2.840e-75
Identity = 123/221 (55.66%), Postives = 158/221 (71.49%), Query Frame = 1 
Query:   37 TLLGCASFMSKCDVVLASQSPRRLEIFHLMGIKDRLRVVVSDFEENLDKSAFSDAREYAKANALGKARDVARRVLSPALGQDPDPAGPLVVVGSDTIVEIGGDILEKPRDEEHAFQMLARLSGTKHLVHSGVAILTSAGGAEEPVECFCETTEVAFAALSEQDMRGYISTKEPFGKAGDYGIQGLGGQMVQGIEGCYFNVMGFPMHRFSSTMSRLIRDGKV 699
            TLL   +FM  C VVLAS+SPRR EIF LMG+ +RL V+VS+FEE+L K+ F    +YA A A  KA +VA +VL PA   +     P +VVGSDTIVE+ G ILEKP D +HAF+ML  LSG +HLVHSGVA+ T A G+ +P  C+ +TT V F A+S+ ++  Y+ + EP  KAG YGIQGLGGQ V+G+EGCYFNVMGFPM +F + +++LI  GKV
Sbjct:   11 TLLAHKAFMDGCRVVLASKSPRRKEIFGLMGLDERLEVIVSEFEEDLRKADFPQPGDYAAATAKFKAAEVAAKVL-PARSDN----RPTIVVGSDTIVELDGTILEKPDDAQHAFRMLKSLSGRRHLVHSGVAVFTGACGSAQPAACWYDTTSVEFLAMSDDEIWAYVESGEPMDKAGAYGIQGLGGQFVKGVEGCYFNVMGFPMSKFGTCLAKLIESGKV 226
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BLAST of mRNA_S-ischiensis_contig11.2357.1 vs. uniprot
Match: A0A7S2UUT0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUT0_9STRA)

HSP 1 Score: 222 bits (566), Expect = 6.250e-69
Identity = 124/236 (52.54%), Postives = 160/236 (67.80%), Query Frame = 1 
Query:   28 VGETLLGCASFM-SKCDVVLASQSPRRLEIFHLMGIKDR--LRVVVSDFEENLDKSAFSDAREYAKANALGKARDVARRVLSPALGQDPDPAGPLVVVGSDTIVEIGGDILEKPRDEEHAFQMLARLSGTKHLVHSGVAILT-----SAGGAEEPVE----CFCETTEVAFAALSEQDMRGYISTKEPFGKAGDYGIQGLGGQMVQGIEGCYFNVMGFPMHRFSSTMSRLIRDGKV 699
            V  T+L    ++ S C +VLASQSPRR EIF +MGI +   + VVVS+FEENLDKS+F +   YA+ NA  KA+DV  ++ +     +   A  L VV +DTIV++ G ILEKP DE+HAFQML+ LSGT HLVHSGVA+ T     ++G + E +E     F ETTEV    LSE ++  YI T EP  K+G YGIQG+GGQ V+G+ GCYFNVMGFPMHRFS+ M+ LI+  K+
Sbjct:   60 VSSTILDRLEYLKSSCGIVLASQSPRRREIFDMMGINNSFDINVVVSNFEENLDKSSFDNPGIYAQINAECKAQDVYNQIRN----DESRHAKSLAVVAADTIVDLRGKILEKPSDEQHAFQMLSELSGTSHLVHSGVALFTRPPVANSGASSEDIEPNIVSFYETTEVEIVPLSEDEIWAYIRTGEPMDKSGSYGIQGIGGQFVKGVRGCYFNVMGFPMHRFSAAMAELIQSKKI 291
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BLAST of mRNA_S-ischiensis_contig11.2357.1 vs. uniprot
Match: A0A7S1TQE1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQE1_9STRA)

HSP 1 Score: 215 bits (547), Expect = 4.750e-67
Identity = 119/218 (54.59%), Postives = 145/218 (66.51%), Query Frame = 1 
Query:   37 TLLGCASFMSKCDVVLASQSPRRLEIFHLMGIKDRLRVVVSDFEENLDKSAFSDAREYAKANALGKARDVARRVLSPALGQDPDPAGPLVVVGSDTIVEIGGDILEKPRDEEHAFQMLARLSGTKHLVHSGVAILTSAGG--AEEPVECFCETTEVAFAALSEQDMRGYISTKEPFGKAGDYGIQGLGGQMVQGIEGCYFNVMGFPMHRFSSTMSRLI 684
            TLLG          VL S SPRR EIF LMG++    +VVS F E+L KS+F+ A  YA+  A  KAR+VA R+L  A  Q      P V+VGSDT+VEI GD+LEKP D E A  ML R+SG  H VHSGVA+ ++ GG  A  P   F ETTEV F  L+E D+  Y++++EP  KAG YGIQGLGGQMV G+ GCYFNVMGFPMHRFS +M+ L+
Sbjct:    4 TLLGAGDAARSVRWVLGSASPRRAEIFGLMGLQPE--IVVSGFAEDLAKSSFATAAAYAEGTATEKAREVAGRLLPDAGAQ------PTVIVGSDTVVEIDGDVLEKPGDVEEAKAMLRRMSGRNHFVHSGVAVFSNLGGRDAGAPTMTFAETTEVTFVELTELDIENYVASREPMDKAGGYGIQGLGGQMVCGLSGCYFNVMGFPMHRFSKSMAELL 213
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BLAST of mRNA_S-ischiensis_contig11.2357.1 vs. uniprot
Match: A0A7S2S2U2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2U2_9STRA)

HSP 1 Score: 209 bits (532), Expect = 3.120e-64
Identity = 116/219 (52.97%), Postives = 146/219 (66.67%), Query Frame = 1 
Query:   43 LGCASFMSKCDVVLASQSPRRLEIFHLMGIKDRLR--VVVSDFEENLDKSAF---SDAREYAKANALGKARDVARRVLSPALGQDPDPAGPLVVVGSDTIVEIGGDILEKPRDEEHAFQMLARLSGTKHLVHSGVAILTSAGGAEEPVECFCETTEVAFAALSEQDMRGYISTKEPFGKAGDYGIQGLGGQMVQGIEGCYFNVMGFPMHRFSSTMSRLI 684
            LG    +S+C +VLAS+SPRR EIF LMG+ DR+   +VVSDFEE+L KS F      + Y +A A GKAR VA ++ S   G     A P+ VVG+DTIV++ G++LEKP  E+ A   L RLSG  H VHS VAI +S  G  EPV  FCETT V F  LS+ ++  Y+++ EP  KAG YGIQGLGGQ V  IEGCYFNVMG PM RFS+ ++ L+
Sbjct:   36 LGSIEALSRCRLVLASKSPRRREIFDLMGL-DRVGYDIVVSDFEEDLPKSDFPGEDGPQRYCEATATGKARSVAGKIFSQGSGTP--SANPVFVVGADTIVDLDGEVLEKPSSEQDAAATLRRLSGRAHFVHSSVAIFSSRHGVAEPVISFCETTRVKFGQLSDAEISAYVASGEPMDKAGSYGIQGLGGQFVDQIEGCYFNVMGLPMRRFSTAIAGLV 251
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BLAST of mRNA_S-ischiensis_contig11.2357.1 vs. uniprot
Match: W7UAS6_9STRA (Acetylserotonin o-methyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAS6_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.450e-59
Identity = 111/228 (48.68%), Postives = 146/228 (64.04%), Query Frame = 1 
Query:   58 FMSKCDVVLASQSPRRLEIFHLMGIKDRLRVVV-SDFEENLDKSAFSDAREYAKANALGKARDVARRVLSPALGQDPDPAG--------PLVVVGSDTIVEIGGDILEKPRDEEHAFQMLARLSGTKHLVHSGVAILTSAG-----GAEEPVECFCETTEVAFAALSEQDMRGYISTKEPFGKAGDYGIQGLGGQMVQGIEGCYFNVMGFPMHRFSSTMSRLIRDGKV 699
            F +K +++LAS+SPRR EI  LMG   +  VV+ SDF E+LDK  F +  +YA+ NA  KA++VA ++   +   D    G          +V+GSDTIV+  G ILEKP D +HA+ ML+ LSG  HLVHSGVAI +S G     G   PV  FCET  V FA LSE+++  YI + EP  KAG YGIQGLGGQ+V+GIEGCYF VMG PMH+ S  +++   D ++
Sbjct:   65 FKTKVNLILASKSPRRQEILQLMGFDSKDFVVLPSDFPEDLDKRNFINPADYAQKNAECKAQEVATKLFGGSSSGDVGKVGGQRDAGKKTTIVIGSDTIVDRDGIILEKPEDAQHAYAMLSSLSGRTHLVHSGVAIYSSKGPKSGDGIPLPVVSFCETARVDFAPLSEEEIWNYIRSGEPMDKAGGYGIQGLGGQVVRGIEGCYFTVMGMPMHKLSVALAQFAEDDQI 292
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BLAST of mRNA_S-ischiensis_contig11.2357.1 vs. uniprot
Match: A0A0G4GLH8_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GLH8_VITBC)

HSP 1 Score: 190 bits (482), Expect = 3.230e-56
Identity = 112/235 (47.66%), Postives = 146/235 (62.13%), Query Frame = 1 
Query:   13 STSGAVGETLLGCASFMSKCD---VVLASQSPRRLEIFHLMGIKDRLRVVVSDFEENLDKSAFSDAREYAKANALGKARDVARRVLSPALGQDPD---PAGPLVVVGSDTIVEIGGDILEKPRDEEHAFQMLARLSGTKHLVHSGVAILTSAGGAEEPVECFCETTEVAFAALSEQDMRGYISTKEPFGKAGDYGIQGLGGQMVQGIEGCYFNVMGFPMHRFSSTMSRLIRDGKV 699
            S+  A   ++LG   + S  D   V+LAS+SPRR EI  LMG+   + V  S F E+LD  AFS  + YA ANA  KA +VAR  L  A G D     P    VV+G+DTIV++ G ILEKP + + A  ML+R+SG  H VH+GVAI T   G  EPV  F E+T+V FA LS  ++  Y+++ EP  KAG YGIQGLGG  V+ IEGCYFNVMG PMH  S  +++L  + ++
Sbjct:   63 SSLSATSTSILGSCFYPSAGDCLRVILASKSPRRKEICGLMGLD--VTVYPSTFAEDLDHGAFSSPQSYAAANAAHKAAEVARGALG-AGGDDESSTCPPAADVVIGADTIVDLDGVILEKPANHDDAVSMLSRMSGRCHAVHTGVAIFTRRAGPAEPVAHFVESTKVKFAPLSRSEIDSYVASGEPMDKAGGYGIQGLGGMFVESIEGCYFNVMGLPMHHLSKVLAQLDANRQI 294
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BLAST of mRNA_S-ischiensis_contig11.2357.1 vs. uniprot
Match: C1MWX6_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MWX6_MICPC)

HSP 1 Score: 187 bits (475), Expect = 3.600e-56
Identity = 102/211 (48.34%), Postives = 136/211 (64.45%), Query Frame = 1 
Query:   76 VVLASQSPRRLEIFHLMGIKDRLRVVVSDFEENLDKSAFSDAREYAKANALGKARDVARRVLSPALGQDPDPAGPLVVVGSDTIVE-IGGDILEKPRDEEHAFQMLARLSGTKHLVHSGVAIL--TSAGGAEEPVECFCETTEVAFAALSEQDMRGYISTKEPFGKAGDYGIQGLGGQMVQGIEGCYFNVMGFPMHRFSSTMSRLIRDGKV 699
            ++LAS SPRR EI   +G+K    VVVS+F+E+LDKS F+   EYA A A  KA +VA R+       + +   P VV+G+DT+VE   G ILEKP+D   A +ML  L G  H VH+GV ++   + GG E  V+ F ETT+V FA L E ++  YI T EPF KAG YGIQG  G  V  I GCYFNVMGFP+H+F+  +S++I++G +
Sbjct:   14 LILASASPRRKEILGNLGLK--FDVVVSNFDEDLDKSTFTGGAEYASATATHKAMEVATRL-------EKEKPAPFVVIGADTVVEGPDGAILEKPKDANEAMKMLLSLQGITHQVHTGVGVIFPNNGGGGERLVKTFSETTKVTFAPLGEAEIAAYIKTGEPFDKAGGYGIQGPAGAFVSSISGCYFNVMGFPVHKFADVVSKMIKEGVI 215
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BLAST of mRNA_S-ischiensis_contig11.2357.1 vs. uniprot
Match: A0A7S0RUK1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RUK1_9CHLO)

HSP 1 Score: 187 bits (474), Expect = 5.770e-56
Identity = 104/213 (48.83%), Postives = 139/213 (65.26%), Query Frame = 1 
Query:   76 VVLASQSPRRLEIFHLMGIKDRLRVVVSDFEENLDKSAFSDAREYAKANALGKARDVARRVLSPALGQDPDPAGPLVVVGSDTIVEIGGDILEKPRDEEHAFQMLARLSGTKHLVHSGVAILTSAG-----GAEEPVECFCETTEVAFAALSEQDMRGYISTKEPFGKAGDYGIQGLGGQMVQGIEGCYFNVMGFPMHRFSSTMSRLIRDGKV 699
            +VLAS SPRR E+   +G+K    VVVS FEE LDK++F +A +YAK  A  KA DV  +V+        +   P +V+ SDTIVE+ G ILEKP   + A++ML+ LSG+KH VH+GV ++         G    V  F ETT V FA LS + + GYI++ EP  KAG YGIQG+GG  V+GI+GCYF+VMGFP+HRFS+ + RLI +G +
Sbjct:   14 LVLASASPRRAELLTNLGLK--FDVVVSTFEETLDKASFPNAADYAKETATHKAIDVTGKVIR-------ESGEPDMVIASDTIVELNGQILEKPDGHDGAYKMLSGLSGSKHKVHTGVVLILPKAVDPSTGKSPLVYSFTETTLVEFATLSHEAIEGYIASGEPMDKAGAYGIQGIGGSFVKGIQGCYFSVMGFPIHRFSAEVVRLIENGSL 217
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BLAST of mRNA_S-ischiensis_contig11.2357.1 vs. uniprot
Match: A0A1X6P3D6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3D6_PORUM)

HSP 1 Score: 183 bits (465), Expect = 1.200e-54
Identity = 104/211 (49.29%), Postives = 132/211 (62.56%), Query Frame = 1 
Query:   76 VVLASQSPRRLEIFHLMGIKDRLRVVVSDFEENLDKSAFSDAREYAKANALGKARDV-ARRVLSPALGQDPDPAGPLVVVGSDTIVEIGGDILEKPRDEEHAFQMLARLSGTKHLVHSGVAILTSAGGA--EEPVECFCETTEVAFAALSEQDMRGYISTKEPFGKAGDYGIQGLGGQMVQGIEGCYFNVMGFPMHRFSSTMSRLIRDGKV 699
            +VLAS SPRR EI  ++G+   +    S FEENLDK AF    EYAK NA  KA  V A        G+ PD     +V+GSDTIV + G ILEKPR E  A++MLA LSG +H V S VA+ T +     ++P   FCE T V FA LS + +  YI T EP  KAG YGIQG+GG  + GI GCY+NVMGFP+H F+S ++RL+  G++
Sbjct:   15 IVLASGSPRRREILTMLGLAHEVHA--SAFEENLDKGAFPTPAEYAKTNASSKAAAVVAELAAGGGAGRCPD-----LVIGSDTIVVVDGRILEKPRSEAAAYEMLATLSGREHSVLSAVALFTPSRSEVRDKPATVFCEHTRVRFAPLSPETIAAYIRTGEPMDKAGSYGIQGVGGSFITGITGCYYNVMGFPLHAFTSAVARLLDAGEL 218
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL60_ECTSI6.160e-9262.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CIZ2_9STRA2.840e-7555.66Inosine triphosphate pyrophosphatase-like protein ... [more]
A0A7S2UUT0_9STRA6.250e-6952.54Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1TQE1_9STRA4.750e-6754.59Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2S2U2_9STRA3.120e-6452.97Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
W7UAS6_9STRA1.450e-5948.68Acetylserotonin o-methyltransferase n=3 Tax=Monodo... [more]
A0A0G4GLH8_VITBC3.230e-5647.66Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
C1MWX6_MICPC3.600e-5648.34Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S0RUK1_9CHLO5.770e-5648.83Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A1X6P3D6_PORUM1.200e-5449.29Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:3339198..3344606 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score280.8
Seed ortholog evalue5.9e-73
Seed eggNOG ortholog2880.D8LL60
Preferred nameASMTL
KEGG rclassRC00055,RC00523
KEGG koko:K01868,ko:K06287
KEGG ReactionR03663
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.nucleoside-triphosphate diphosphatase activity
EggNOG OGsCOG0424@1,KOG1509@2759
EC6.1.1.3
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMaf-like protein
Ec32 orthologEc-25_000130.1
Exons6
Model size705
Cds size705
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2357.1prot_S-ischiensis_contig11.2357.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 3339198..3344606 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815618.0351942-CDS-S-ischiensis_contig11:3339197..33393301622815618.0351942-CDS-S-ischiensis_contig11:3339197..3339330Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3339198..3339330 -
1695739807.3432872-CDS-S-ischiensis_contig11:3339197..33393301695739807.3432872-CDS-S-ischiensis_contig11:3339197..3339330Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3339198..3339330 -
1622815618.0509577-CDS-S-ischiensis_contig11:3340246..33402761622815618.0509577-CDS-S-ischiensis_contig11:3340246..3340276Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3340247..3340276 -
1695739807.3590677-CDS-S-ischiensis_contig11:3340246..33402761695739807.3590677-CDS-S-ischiensis_contig11:3340246..3340276Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3340247..3340276 -
1622815618.0667987-CDS-S-ischiensis_contig11:3341541..33416801622815618.0667987-CDS-S-ischiensis_contig11:3341541..3341680Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3341542..3341680 -
1695739807.3707576-CDS-S-ischiensis_contig11:3341541..33416801695739807.3707576-CDS-S-ischiensis_contig11:3341541..3341680Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3341542..3341680 -
1622815618.077106-CDS-S-ischiensis_contig11:3341921..33419981622815618.077106-CDS-S-ischiensis_contig11:3341921..3341998Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3341922..3341998 -
1695739807.3869498-CDS-S-ischiensis_contig11:3341921..33419981695739807.3869498-CDS-S-ischiensis_contig11:3341921..3341998Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3341922..3341998 -
1622815618.0872552-CDS-S-ischiensis_contig11:3342793..33429841622815618.0872552-CDS-S-ischiensis_contig11:3342793..3342984Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3342794..3342984 -
1695739807.3967793-CDS-S-ischiensis_contig11:3342793..33429841695739807.3967793-CDS-S-ischiensis_contig11:3342793..3342984Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3342794..3342984 -
1622815618.0991766-CDS-S-ischiensis_contig11:3344471..33446061622815618.0991766-CDS-S-ischiensis_contig11:3344471..3344606Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3344472..3344606 -
1695739807.405539-CDS-S-ischiensis_contig11:3344471..33446061695739807.405539-CDS-S-ischiensis_contig11:3344471..3344606Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3344472..3344606 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2357.1

>prot_S-ischiensis_contig11.2357.1 ID=prot_S-ischiensis_contig11.2357.1|Name=mRNA_S-ischiensis_contig11.2357.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=235bp
SAIASTSGAVGETLLGCASFMSKCDVVLASQSPRRLEIFHLMGIKDRLRV
VVSDFEENLDKSAFSDAREYAKANALGKARDVARRVLSPALGQDPDPAGP
LVVVGSDTIVEIGGDILEKPRDEEHAFQMLARLSGTKHLVHSGVAILTSA
GGAEEPVECFCETTEVAFAALSEQDMRGYISTKEPFGKAGDYGIQGLGGQ
MVQGIEGCYFNVMGFPMHRFSSTMSRLIRDGKVA*
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mRNA from alignment at S-ischiensis_contig11:3339198..3344606-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2357.1 ID=mRNA_S-ischiensis_contig11.2357.1|Name=mRNA_S-ischiensis_contig11.2357.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5409bp|location=Sequence derived from alignment at S-ischiensis_contig11:3339198..3344606- (Schizocladia ischiensis KU_0333)
AGTGCAATTGCCTCGACGTCGGGAGCAGTCGGGGAGACCTTGCTAGGCTG
TGCGTCCTTCATGTCCAAATGCGACGTGGTGCTGGCAAGTCAAAGCCCCC
GCAGGCTCGAGATTTTCCACCTGATGGGTATCAAGGTGAGAAAGAAGAGG
CGGGACACGATCCCTTATTCGGCAAGAGAGGGAGAGAGATAAAGATCGGC
TCCTTAGCCGAAGGTGGAACCCATCCGGGCCGGGACCGGGCCACTTGTCA
GTTAGATATCGCGGCGTATTGAATCAGACCACGCCGCACTTGTAAGCTTT
GGAAATCTCTCATCGCGGTCTCTTGATTGGTGCATTTGTAGGCTGCGGCA
GCTGGGTTTGCATCAAGAAAGTTTATCGGAAGCCGTCCGGCAGATTGGCC
ACCAAGGCACTCAATCGGGGTTGGCCGCGAGTATGTCAAGGAGAAGTGAG
AGGCCGCAGTCTGGCTGGTGCAATGGGGAGATCTCGACCTGAGCTTTCCG
TCGCGCTATTTGGTGAAGTCTGATTCGTTACCCGTCGCGAATTACGGCAT
AAACAAGCCGACCTACTCCCCCCGGGTGGGCGGTTTCGCTGGCTAAATGC
GGCGAAGCAGGTTCCACGGATTTGGGAACGAACGACGACGATCTGGTTGA
AGCCAAGACCGCCATGCGATTCCTCGTGGCGAGATGAGTCGATAGGGCTT
GTCACACAAAAAATTCTCGAAATGTTCTGCTACTTGGCTGCAAGTAGCGC
TTCGGAAGTACTAACAGGAAGAACACAGGGAGTGGTTCATTCGGACGGAG
TAGAATAGCCGCTAAACGGCCTGAACTTTGGAACAACAGAGGGCGAAGTG
CGGGCCGCGTCACCACGAGTACAACTCTAGCAATGGGTGCCGCTGTCCCT
TTGTTCTGGCCCTGTTAGAGTTGTGAACTGGCAAGGCCTACCAGTTTAAC
TGTCAACCGGTCGTGTGACCGGTCGGTTTTAGCCGGTTGCCGGCAACGGC
TAAAGTATTGTCACAATCAACGAATAACGGTCATGTCACCCGCTCCGGCT
ATACGATTGGCCACCGGTCGGTTAACCCAGTTGACTGGAACCGACCGGTA
AAAACCGGCACCAGTTCACAACGCTACTGTAGGCACTGCACAATAGAGGG
CGCAAAAGCAAAAGACGAGACGCGCTGCTTCCAAGCACTCGAGCTCTGTA
CAAGTGCTTGTTGCTGTAGTGCCGCCCTGTCATCCCCAGCCACCGCTGCT
ACTGCTGCTGCTGCTGCTGCCAGGGTTGGCACTTAGAGCTTACTTAGGGC
CTATTTAGGCTTCATTTTAGGTCTAACTACCCCTAGATAGTTACCTCTAC
TTAATCAAGAGCCTAAAAGGGCATCACTTAGGGGTTCAGTGCCAACCCTG
GCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGGCACAGGACCGCCTGC
GGGTTATAGTGTCCGATTTTGAGGAAAACCTGGACAAGTCGGCCTTTGAG
GACGCCAGGGAGTTCGCCAAACCTAAAGAAATTAGGTCTATTTGCCCCTA
ACTACCTCTAGTTAAGGGCCTAAAAGGGCACCACTTAGGGGTTAAGTGCC
AACCCCACCGCCGCCGCCACAGGACCGCCTGCGGGTTGTCGTTTCCGATT
TTGAGGAAAACCTGGACAAATCGGCCTTCTCTGACGCCAGGGAGTATGCA
AAGGCCAATGCCCTGGGAAAGGCCCGGGACGTGGCCAGACGGGTACTGTC
GCCGGCCCTGGGGCAAGACCCGGACCCCGCGGGGCCCTTGGTGGTGGTGG
GATCGGACACCATGTGAGTTGTGTTTTGTAATTCTTTATTGTGATAGCTG
GCACGAGAACACTCAATTTTTGCACGAAGATAAATAAGCGACTGGGAACG
CAGAGGTGTTCCTACTTACGCGAGTTCAGGGCCCCCCACCCCCGGAAGCC
CGTCTTTGAGAACACTCAATTCTTGAATGGGATAGCCACTAGTACGAGCA
CACTCGGTCTCACACGTGTGCGATTGTACCTCGTTACGATTTTTATGCAT
CTCCATGTGAGTGACCCACTCGGGCATGCTTGAAAGGCAAGGCTGACATG
GCACTTGGTCCGCTTGGGCCTGCTCTCGTTCATTGGCGACTTGATCCCCC
CCTGCCTCCGGCGACCCCCGCCCACCCGCCCGCCCGCCCGCCCGCCCGCC
CGCCCGCCACGTGCTGACACGCGCTGCTCTCAGGCCTGCTCTCAGTCAAG
GGCAGTGATGGAATATCTGCTGTAAGCAAATCAACCTATTTATGGACAGT
AATTATCATTTTGAGTGGTAGATGAGCGGCGAGTTCCAGGCCCCGTGTCC
AAAGGCTCGTCCCGAAACGGGACTAGTATGTCTATCGATGGTCGACATTC
GATCGTTTGACCCACACTAAATCCAAGTACTTCGTAGTTAGCAACGCCAC
GCACACATCAGTCAGCCCGATAACAATCTACTGATCGATATTCCATCACT
GGTCAAGGGTGACTTCTTCCCCCCCTGCGTCCGGTCACCCCCGCCCGCCC
GCCCACACCCCCCCACCCCACTTCCCGCCCGTGTCTGCCCTGCTCCTCGA
CCGCCCAGCGTCGAAATCGGGGGGGACATCCTTGAGAAGCCCCGTGACGA
AGAACACGCCTTCCAGATGCTTGCCAGGCTCTCAGGTAACCATGGTACAA
AAGTGCGTGTTCTTTTGCCCAAATATTTTTTTCGAGTATCGATTGACCCG
TTGCTCGGTAGAGTCCATGTGATGCTGTGATACGAGAACTATAGCGCAAA
TGAACTTATTCATCGAGCTCTTTCATCTGTCGAAATTTCACGGTCGACAT
CCGACGCGTCCTTCATTGGGCGGCCCGGGCACCAAAAATAATAGCGATCG
CAATTTTGTACCATGGGTGCTCTCAGGCACCAAGCACCTGGTGCACTCGG
GGGTGGCCATCCTCACGTCCGCGGGGGGGGCGGAGGAGCCGGTGGAGTGC
TTCTGTGAGACTACGGAGGTGGCCTTTGCAGCCCTGTCCGAGCAGGACAT
GCGCGGGTACATAAGGTGGGTGGGTGCGGTGGATGCTTGGGCTTTTTGTG
TAATATTCTTGTTTCCTTTGCTTCTTGTTGTTGTTGTTGTTTTTGTTCTA
CTTCTTCTTCGTCTTCTTCTTCTTCTTCTTCTTCCTTCTTCCTCTGCTTC
TTCTTCCTCTTCCTCTTCTTCTGCTTCCTCTTCTTCTTCTTCTTCTTCCT
CTTCTTCTTCTTCCTCTTCTTTTTCTTCTTCCTCTTCTTCTTCTTCCTCT
TCTTCTTCTCCCTATTCTTCTTCTCCCTATTCTTCTTCTTCTTGTTGTTC
TTCCTCCTCCTTCATCTTCTGGGGTGCTGCTGCAAGTACTGTGCAATGCA
ATGCCGTGTCGTGGTACCGAGTTTCGAGGCACCGTAGCAAGTACGGAGCA
GTAGCACGCACCAGCACATGTGCTACAGTACATAGCAAGTCGTACTTCGA
AGTACCCAGTAGCTACACAGTGAGTAGTACCACCGCACTGCTGTATGGTT
TTTACTTGTAGCAATTACGTGTACGGAGTTGCTGCGCTTCTCACGGTACA
AAGTTGCGGCTGCAGTAACCCTACGGTACTGCGAGCACCACGGAGGCCTT
GCACTCCACTCTTGCCCTCTAGGCCCGCAGTTCGCGCTTCCAGGACTGTA
TTGTCATGCAATGATCGGTGTGGTTTACACTGGGCATGTACTGCACAAAT
GTAACTGTAGGTATGAAACTGCCCATCACACTCCCCCTTTTTTCCCCGTC
CTTCCCCGTCCTTTTTCTGTGTTTTTTTAACCTACACCCCCCACCTGCCT
GCTCCTTTTTCCTTGATGCGATAATTGCTAGTATAGTAGCATCAAATTCT
TAAATGAATCAACTGAAATTACGAGAACAGTCAATCGCACACACGTGCGA
TTGTACCTCGTTACAATTTATACGAATCACTACCCATGGCGCTTCCAGGT
ACCCTCATCAGAGCCCGGGCCACCGCAAGCATTGTGTGGCCAGGTGCGGC
AACGGCTCGTCAACCTTCCGCCAAGCACAAGTTGCACTGCTTCGAAATAC
TCTGCGCTGCATGTGGCACATGTATGACCGTCCACCCCACCCCAACACCG
CCAAGTACAAGTACAGTGCTTTGAAGTAGAGTACTCTGCACGTCATGTGG
CAAATGTACGACTGTCCACCCCACCCCAACACCCACCATCGTCGGTGTCT
GTTGCTGCCCTCCCCGCCCTGCCCGCCACTGCCCCGTCTCGCGGGCGCTT
TCTCCCCCCCGGCCCTTCCTTCCGCGGCAGCACAAAGGAGCCATTCGGCA
AGGCCGGTGAGTGATCGGACCGCATGCCGGCCCCCAGCCCCTGCTCTGCC
CAATCATCATTCCATGTTCTTGTTGGCAGTTTGTGTGTGCAACTGACATG
CTGTGCTCCTCTTCTATGAGCCTACAATTGACCTACTGTAGTGTCGAGTC
GCACAGGTACAAAGCTTGACACAATCACCATTCCATGTTCTTGTTCACAG
TTTTCTTGGAGCCGCCGCAGCTGCACCCGTGCGAGCACGAATAATGCGTG
AATGTACTCCGGCGATGAAGTGAACCTATTCTCTTGACTACTTGGAAGTA
CTTTGGAATCAACAGTTGCTGTTTGTCGGAAAAGGCGGCGCTGGCGGCGG
GGCACGTGCCTCTCGAAAGCCGGTGATGGAATACCATAGATCAGTAGATA
AATATCGGGCTCGACTGATTTTTGTGGGTGGCGCTACTAAATACTGTACT
TGGATTGAGCGTGGGTCAAACTATCGAATATTGACTATCGATAGATGTAT
AGATCAGTACTGTCGACCACTAAAAATAGATCAGTACTGTCGATAAATAG
GTTGATTTGCTTAGATATTCCATCACTGCCGAAAGCCAATCCCCCCCTGA
GGCACATGCCCCCCCCGGGGGCCCCCTTTGCGCCATGCGCTGCCATGGCT
CCCTCCCCTCCGGCCCTGCCCTGCCCTGCCCAGTGATGGAATATCAAAGC
AAATCAACCTATTTATCGACAGTACTGATTTGAAATATTTTGATGGCAAG
CGAGTTCCGGGCCCCATCCCAACAACCTAAGGTGGGGACCTCACCAGAAG
CCCTCTCACCCGCAGGTATATATCTATCGATAGTTTCGCCACCCACAAAA
TCAGTAGAGCCCGATAACTTATCTACTGATCGATATTCCATCACTGGCCC
TGGCCCGCCCCCTCCCTTTCAGGCAGCTACGGGATACAGGGCCTCGGGGG
GCAGATGGTGCAGGGCATCGAGGGCTGCTACTTCAATGTCATGGGGTTCC
CGATGCACCGATTTTCCTCCACCATGTCGCGGCTAATCCGCGATGGGAAG
GTGGCATGA
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:3339198..3344606-

>mRNA_S-ischiensis_contig11.2357.1 ID=mRNA_S-ischiensis_contig11.2357.1|Name=mRNA_S-ischiensis_contig11.2357.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1410bp|location=Sequence derived from alignment at S-ischiensis_contig11:3339198..3344606- (Schizocladia ischiensis KU_0333)
AGTGCAATTGCCTCGACGTCGGGAGCAGTCGGGGAGACCTTGCTAGGCTG
TGCGTCCTTCATGTCCAAATGCGACGTGGTGCTGGCAAGTCAAAGCCCCC
GCAGGCTCGAGATTTTCCACCTGATGGGTATCAAGAGTGCAATTGCCTCG
ACGTCGGGAGCAGTCGGGGAGACCTTGCTAGGCTGTGCGTCCTTCATGTC
CAAATGCGACGTGGTGCTGGCAAGTCAAAGCCCCCGCAGGCTCGAGATTT
TCCACCTGATGGGTATCAAGGACCGCCTGCGGGTTGTCGTTTCCGATTTT
GAGGAAAACCTGGACAAATCGGCCTTCTCTGACGCCAGGGAGTATGCAAA
GGCCAATGCCCTGGGAAAGGCCCGGGACGTGGCCAGACGGGTACTGTCGC
CGGCCCTGGGGCAAGACCCGGACCCCGCGGGGCCCTTGGTGGTGGTGGGA
TCGGACACCATGACCGCCTGCGGGTTGTCGTTTCCGATTTTGAGGAAAAC
CTGGACAAATCGGCCTTCTCTGACGCCAGGGAGTATGCAAAGGCCAATGC
CCTGGGAAAGGCCCGGGACGTGGCCAGACGGGTACTGTCGCCGGCCCTGG
GGCAAGACCCGGACCCCGCGGGGCCCTTGGTGGTGGTGGGATCGGACACC
ATCGTCGAAATCGGGGGGGACATCCTTGAGAAGCCCCGTGACGAAGAACA
CGCCTTCCAGATGCTTGCCAGGCTCTCAGCGTCGAAATCGGGGGGGACAT
CCTTGAGAAGCCCCGTGACGAAGAACACGCCTTCCAGATGCTTGCCAGGC
TCTCAGGCACCAAGCACCTGGTGCACTCGGGGGTGGCCATCCTCACGTCC
GCGGGGGGGGCGGAGGAGCCGGTGGAGTGCTTCTGTGAGACTACGGAGGT
GGCCTTTGCAGCCCTGTCCGAGCAGGACATGCGCGGGTACATAAGGCACC
AAGCACCTGGTGCACTCGGGGGTGGCCATCCTCACGTCCGCGGGGGGGGC
GGAGGAGCCGGTGGAGTGCTTCTGTGAGACTACGGAGGTGGCCTTTGCAG
CCCTGTCCGAGCAGGACATGCGCGGGTACATAAGCACAAAGGAGCCATTC
GGCAAGGCCGGTGACACAAAGGAGCCATTCGGCAAGGCCGGTGACTACGG
GATACAGGGCCTCGGGGGGCAGATGGTGCAGGGCATCGAGGGCTGCTACT
TCAATGTCATGGGGTTCCCGATGCACCGATTTTCCTCCACCATGTCGCGG
CTAATCCGCGATGGGAAGGTGGCATGACTACGGGATACAGGGCCTCGGGG
GGCAGATGGTGCAGGGCATCGAGGGCTGCTACTTCAATGTCATGGGGTTC
CCGATGCACCGATTTTCCTCCACCATGTCGCGGCTAATCCGCGATGGGAA
GGTGGCATGA
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