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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-12_002370.1 |
| Exons | 4 |
| Model size | 1361 |
| Cds size | 1335 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815612.0860255-UTR-S-ischiensis_contig11:2526305..2526331 | 1622815612.0860255-UTR-S-ischiensis_contig11:2526305..2526331 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 2526306..2526331 + |
| 1695739803.211032-UTR-S-ischiensis_contig11:2526305..2526331 | 1695739803.211032-UTR-S-ischiensis_contig11:2526305..2526331 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 2526306..2526331 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815612.0996072-CDS-S-ischiensis_contig11:2526331..2526661 | 1622815612.0996072-CDS-S-ischiensis_contig11:2526331..2526661 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2526332..2526661 + |
| 1695739803.2218702-CDS-S-ischiensis_contig11:2526331..2526661 | 1695739803.2218702-CDS-S-ischiensis_contig11:2526331..2526661 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2526332..2526661 + |
| 1622815612.111306-CDS-S-ischiensis_contig11:2527024..2527159 | 1622815612.111306-CDS-S-ischiensis_contig11:2527024..2527159 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2527025..2527159 + |
| 1695739803.2319129-CDS-S-ischiensis_contig11:2527024..2527159 | 1695739803.2319129-CDS-S-ischiensis_contig11:2527024..2527159 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2527025..2527159 + |
| 1622815612.1221635-CDS-S-ischiensis_contig11:2528729..2529067 | 1622815612.1221635-CDS-S-ischiensis_contig11:2528729..2529067 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2528730..2529067 + |
| 1695739803.2438402-CDS-S-ischiensis_contig11:2528729..2529067 | 1695739803.2438402-CDS-S-ischiensis_contig11:2528729..2529067 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2528730..2529067 + |
| 1622815612.1399097-CDS-S-ischiensis_contig11:2530806..2531338 | 1622815612.1399097-CDS-S-ischiensis_contig11:2530806..2531338 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2530807..2531338 + |
| 1695739803.2539423-CDS-S-ischiensis_contig11:2530806..2531338 | 1695739803.2539423-CDS-S-ischiensis_contig11:2530806..2531338 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 2530807..2531338 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2284.1 >prot_S-ischiensis_contig11.2284.1 ID=prot_S-ischiensis_contig11.2284.1|Name=mRNA_S-ischiensis_contig11.2284.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=445bp
MAGRASSFSVVRGSRQATRSRSLTRSLRGRRAGSVSSKSKLVGYDRRERY
SSFEAPSEALIRLTDDEVVALAETEVASLRSLLAPDHARVGQALAALLMR
VVRRCKRDDQVVPAVALTCATLGLKGGHPASTHTLGAKLRGLGMAWYSYR
LEECQALAEAELDADGDGWVTLEDIFSFLRRRAALANASAAGSAQGAGLA
PGQTLDDLHRGLRGVPEASASRRRRRTKGPGVNGDPGVWPAGEEQEEAAA
IAAGVAPGLADKLLHAAWSAREEGVDVMSALPHPPPEHSSHSGGGGGGGG
GGGRDGRDDPSDSALDPAADPESSVLGPRATAALLRHLAVGFAPQALRSL
EEEHAAAAATAAADASAAGAASPGVATTHHGAWGGGTTGVQERGGGGSGG
NRSRDWQYSAYGNQGGGGEGDDDEDEEEEYDSETAGGRTGGGGGG back to topmRNA from alignment at S-ischiensis_contig11:2526306..2531338+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig11.2284.1 ID=mRNA_S-ischiensis_contig11.2284.1|Name=mRNA_S-ischiensis_contig11.2284.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5033bp|location=Sequence derived from alignment at S-ischiensis_contig11:2526306..2531338+ (Schizocladia ischiensis KU_0333)
CTCTCGCAGAGGGGTTAGCCGTTCGAATGGCGGGTCGCGCGAGCAGCTTT
TCGGTTGTCAGAGGATCCCGACAGGCTACTCGGTCCCGTAGCTTGACCCG
CAGCTTACGCGGACGGAGGGCGGGGTCCGTGTCGTCAAAAAGCAAGTTGG
TGGGGTATGACCGTCGTGAAAGATATTCCTCCTTTGAAGCCCCCTCAGAG
GCCCTCATCCGCCTGACGGATGACGAAGTTGTGGCACTCGCCGAGACGGA
GGTGGCCTCCTTGCGATCTTTGCTGGCGCCGGACCACGCGCGAGTCGGGC
AGGCCCTGGCGGCGCTGCTAATGCGCGTCGTACGGAGGTGCAAACGTGAC
GACCAGGCAAGTTTACTGCCACATTAGGCTGCTGCGGATCTGGGGGCTGG
ACAGTACTGTTTTGTAAAGACCGCCAGTTCTAGAGATTGTTCACTACCCA
GGAGTCCAACCGGGTGCTGGGCTGTCACAAAGTTGCTGCCTGTCTGTCCT
CCCTGTACAAGCTCTCTCAACACCTGCAATACCAGATGTAGTACGTACTT
GTAGTGTACTGCAGTACACACCTCTGCTCTTATGCCATCTCCTCGCATCC
TCTTTGCACTGGAGCAGCGTCGGGAACGGTGAGCAACGGAACCCTCGTCA
CCCTCTAGTCTCATCCCGGGCCCCGTGCGGTTTCGGCCGCCTTTGCTATT
ATAATACGTCGCCTGCCAGGTGGTTCCTGCAGTGGCCTTGACCTGTGCGA
CGCTGGGCCTGAAAGGGGGCCACCCCGCCTCCACCCACACGCTGGGTGCG
AAGTTGAGGGGGCTGGGGATGGCCTGGTACAGCTATAGGCTTGAGGAATG
TCAGGTAAGATATATTGGCTAAGTTGTGAACTGGCGAGGCCTACCAGTTC
AACTGTTAACCGGTCTTGTGACCGGTCGGTTCTAACCGGTTGCCGGTATC
GGCGAAAGTATTGCCGAAATCAACCTTTAACGGTCATGTCGCCGGCTCCG
GCTACACGATTGGCCACCGGTCGGCTAACCGGCTAAACCAGCTACCAGGA
ACCGACCGATAAAAACCGGCACCAGTTCACAACACTAAATATTGGCCTTT
TGTCGTCGGCTGCTGCTGGCGCATCTCCTTCTCTGGCATGCGACCTTCCA
AGGATTATGGTTTGGGTTATGCCCCAACTTTGGGGGGGGAGTTTGGAAGC
ACCAGTGATACAATACGAGCAGGTGTAAGCGCGCTTGTGCGTGGCCCTCC
TCTACCATTTGGTCAGCGGTCCGCGAGAGGCCATGCCGCCGGCCAGTTCC
GTGATTTTGCATTGGAGATCCCCGAGGAGTACAGGCGTCATTTGCTTGTA
CTTCGAAGTTCATTTTTTTTTTGTGCTTGGGCATCAGGCCCCGATTTTTC
CAGCGATCAGGCCCCGATTTTTCCAGCTATTTTTCCGGCGATTGGGGCAC
CTCCGCCAACCAACCATAGATCAAGGGTTTTGCACCTCTACCTGCAAAAC
CCTACTGGACCTTGTGACATCACCGATCTCGACCTCCCCGACCAACAAAG
AGCACGCGGCGGAACCCTTTGGATCCCTGTCCAAGGGCGCCACGGAGGTC
AGCAAGATGCTTGCCATCCACGTACTCAGTAGGCAGGGAGGGGGAGTTGG
GGAACCTTGCACCCGTGGAGTTTATCCGCGAGCTGAGGGGGTGCATTTCC
TGCACCGTCCAGTCTCAAGTAATGTCAAGTAGTAGGAGTACTCTATATAT
ATATATTTACCTACTACGGCAAGCACCACGTGAGTACATATACATATGTA
CCTACTATATGCAAGCACCACGTGAGTACTTCGTATAGAAATAAAAACAT
ATACCATGTACTGTAGTACATATAAGTATACGTTACTCGTATTATATTGT
CCTTGAGCTGAGGGACTGCATTTCCTGCACCGTCCAGCAGCTGGTGTCGT
GGAGGGTTGTGGCTGTGCAGGGGAGGGGGTCCACATGTCATGTGGACCCT
CGCCCACCAGCTATTGTCAGGGGCAGGTTTTCCAGTGGCTGGGAGGGCCG
CAGGCGCTGAGGCAGGATAGATGAGAGGAAGACCCTGGGGGGAATACTTG
TAGCCGAGCGTCTGCAAGCTCGGATGCTATGTAGTAGTAGTAGAGTAGCA
GTAGCAGTAGTAGTAGTAGTAGTAGTAGTACTAGTAGTAGTAGCAGTAGT
AGTAGTACAGCAGTAGTAGCAGTAGTAGTGGTAGTAGTAGTGCTGATTCT
CATTTTTGGATGCTATTCCAGCAGTCTAAGCAACCGTTGATTCCTGCATA
CTTTGCATATGTACACTTGCAGCAATATTGTACAATCTACCCACGCAGAT
GGGCGTGCTTGACAAAAAAGAGCACCAAACAAACAAGCCCGTGCGCGCGC
GCGCGCACACATACACACACACAGGCTCTCGCGGAAGCCGAGCTGGACGC
GGACGGGGACGGGTGGGTCACCCTTGAGGACATCTTCTCTTTCCTGCGTC
GGAGGGCCGCCCTCGCAAACGCCTCCGCCGCCGGGTCTGCACAGGGGGCG
GGGCTTGCCCCTGGGCAGACGCTAGATGACCTGCACAGGGGCCTCCGGGG
AGTGCCGGAGGCCTCTGCTAGCAGGCGGCGGCGACGCACCAAGGGGCCTG
GGGTCAACGGCGACCCAGGCGTCTGGCCTGCTGGGGAGGAGCAGGAGGAG
GCGGCGGCGATAGCGGCGGGCGTGGCACCGGGTCTGGCAGATAAGCTCCT
GCACGCGGCGTGGTGAGAGGCGGGGTGATTCATATACATTGTAGCGAGGT
ATAATCGCACGTGTGTGAGATTGAGTATGGCGGGTTGGGTTGCTTCCAAG
TGGGCTGGGGTTTTGCGGGGGGCGCGCGTTGGGATGGTAGCTTACTTGTC
AGAACAACGGGGAACGCCATTTGACTAACCTGTGCAGGTTAGTCAAATGG
CGTTCCCCGTTGTTCTGGGACTACTCTAGCGGGTTTTTTCGGCAGTTGGT
GTGCCTTTCGGCGGCGGCGGCGGCGGCGGCGACACGAGCAATAGCAACGA
CAACAAGGACAAGAGCAGGAGCAGCAGCAAGGAGAAGACAAAAACATCCG
AAACAGAAAGCAAAACAAAAACGACGACAATGCCGCCAAAAATCGACCTG
ATCCACCACCGTTACTCTTCACCGTAATAGTACAACAGTGTTTGGCCTTC
AGAGGACCTCGACAGTCACCGGGCAGGTAGATTTGTACGAGTACTCGCAC
GTGGTCAGACACCCTCCCCCGCAATATTATATCAGTACCATGTCATCTGG
GTACTGTATGTGTGTATGTACTTGAAAGCGCTACGTACAGGGCTGCAGCA
GTACGTAGTCGTGCGTACTGTGCATGGGTGTACAGTAAGTTCTTTGAGTA
TTTGTGCTGTGCTCGTCAGCCATGAGCTTCTTTCATCAGCGCCCAAGAGT
ACTCTCCTTCACAAGTCAGTACTGTAGCATTCTGCTACGAGCAGTACTGC
TGTAGTGCTCTTAGTCCATCACTGCAATACCTCGCATGTTGGCCTGACAG
TACTTAGGAGCTATGTCACACCGTACCGCAAGCTACTGCGCATGTTGTAC
TGCTCTGTCTCGATCGAGGCGCGTGCTCCATGGTCTCGGGACTACGGCAA
GCACAACATGAATGAGTACATATACAGTACATGTGCACGCTTCAAACTGA
GCCTGCCGTGACTATAGTGTGGGAAGGTAGTTTCATAAGTACATACATTT
ACATCTGTACGGTATGTGCTCAGTTAAACCATGCTGATCATTGCGTCGGG
CAATGATAGTACAAGCCTGCCGTGACTCAGCTAGCCGAGAGCCCACTTTC
ATTGACCAGCGCCCTCTTCGATGTCCAGTCACCACCCACCGCTCGTGCCC
CCTCGGAGGGAGGACCAACCACAGGAGCTGCGCATGTGTACTTCGAAGTA
CATACATAGTGCTGGCTTCTTCCCCAATACTTGGATCTACTGTATGAGTA
TATATATACTTCGTATATATGTACTCACATGGTGCTTGCCGTTGTCCCGA
GACCATTGACCCCGCGCCACGTGCGAGGCGGAGCAGGTATATGTATGAGA
TTATACTACGAGGTATATATATATGTACATGTACTCACTCTGTGCTTGCC
GCAGTCCCGAGACCGTTGACCACGCGCCTCGGTCGAGACAGAGCAGGACC
CCTCCCTCCCCTGGCAGAGCCAGGGTGGGAGGGAGCATGAGAGGGCAGTA
GGTACTCTAGTACAGTAGTAAGTACACCATCACCCGCTGAGGCAGTTTCA
ACACGCGCTCGTCCACACCAAAAGCGCACGGGCTGTCTTTTCCTGCAGTG
AGCGGTCCTCCCCCCACTGGGGGCCACGCTCGTCCACCTCCCTCCCATCT
CCACGTCCCCGAGAGGGGCTCGTCCCTTCTGACGCGCAATCTCGCTCGCT
CGCGCCCACTGCGTCCACGTCCGCTCCCGCCGACCCCGTCACATTGTACA
GGTCGGCTCGCGAGGAGGGGGTAGATGTCATGTCCGCCTTGCCACACCCG
CCCCCCGAGCACTCCAGCCACAGTGGTGGCGGCGGCGGCGGCGGCGGCGG
CGGCGGCAGAGACGGCAGAGACGACCCCAGCGACTCGGCCCTGGACCCAG
CGGCTGATCCGGAATCTTCTGTCCTAGGCCCGAGGGCCACTGCAGCCCTG
CTCCGTCACCTTGCCGTTGGTTTCGCCCCACAAGCCCTGCGTTCTCTTGA
GGAGGAACATGCTGCCGCCGCCGCCACCGCCGCTGCCGATGCTTCCGCCG
CTGGCGCGGCTTCACCAGGGGTGGCAACCACACACCATGGCGCGTGGGGG
GGTGGCACCACGGGAGTGCAAGAACGAGGTGGCGGCGGCAGTGGCGGCAA
CAGGAGCCGAGATTGGCAGTACAGTGCGTACGGGAACCAAGGAGGCGGAG
GTGAGGGGGATGACGACGAGGACGAGGAGGAGGAGTACGATAGCGAGACC
GCGGGGGGTCGAACCGGGGGCGGCGGCGGCGGC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig11:2526306..2531338+ >mRNA_S-ischiensis_contig11.2284.1 ID=mRNA_S-ischiensis_contig11.2284.1|Name=mRNA_S-ischiensis_contig11.2284.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2670bp|location=Sequence derived from alignment at S-ischiensis_contig11:2526306..2531338+ (Schizocladia ischiensis KU_0333)
ATGGCGGGTCGCGCGAGCAGCTTTTCGGTTGTCAGAGGATCCCGACAGGC
TACTCGGTCCCGTAGCTTGACCCGCAGCTTACGCGGACGGAGGGCGGGGT
CCGTGTCGTCAAAAAGCAAGTTGGTGGGGTATGACCGTCGTGAAAGATAT
TCCTCCTTTGAAGCCCCCTCAGAGGCCCTCATCCGCCTGACGGATGACGA
AGTTGTGGCACTCGCCGAGACGGAGGTGGCCTCCTTGCGATCTTTGCTGG
CGCCGGACCACGCGCGAGTCGGGCAGGCCCTGGCGGCGCTGCTAATGCGC
GTCGTACGGAGGTGCAAACGTGACGACCAGATGGCGGGTCGCGCGAGCAG
CTTTTCGGTTGTCAGAGGATCCCGACAGGCTACTCGGTCCCGTAGCTTGA
CCCGCAGCTTACGCGGACGGAGGGCGGGGTCCGTGTCGTCAAAAAGCAAG
TTGGTGGGGTATGACCGTCGTGAAAGATATTCCTCCTTTGAAGCCCCCTC
AGAGGCCCTCATCCGCCTGACGGATGACGAAGTTGTGGCACTCGCCGAGA
CGGAGGTGGCCTCCTTGCGATCTTTGCTGGCGCCGGACCACGCGCGAGTC
GGGCAGGCCCTGGCGGCGCTGCTAATGCGCGTCGTACGGAGGTGCAAACG
TGACGACCAGGTGGTTCCTGCAGTGGCCTTGACCTGTGCGACGCTGGGCC
TGAAAGGGGGCCACCCCGCCTCCACCCACACGCTGGGTGCGAAGTTGAGG
GGGCTGGGGATGGCCTGGTACAGCTATAGGCTTGAGGAATGTCAGGTGGT
TCCTGCAGTGGCCTTGACCTGTGCGACGCTGGGCCTGAAAGGGGGCCACC
CCGCCTCCACCCACACGCTGGGTGCGAAGTTGAGGGGGCTGGGGATGGCC
TGGTACAGCTATAGGCTTGAGGAATGTCAGGCTCTCGCGGAAGCCGAGCT
GGACGCGGACGGGGACGGGTGGGTCACCCTTGAGGACATCTTCTCTTTCC
TGCGTCGGAGGGCCGCCCTCGCAAACGCCTCCGCCGCCGGGTCTGCACAG
GGGGCGGGGCTTGCCCCTGGGCAGACGCTAGATGACCTGCACAGGGGCCT
CCGGGGAGTGCCGGAGGCCTCTGCTAGCAGGCGGCGGCGACGCACCAAGG
GGCCTGGGGTCAACGGCGACCCAGGCGTCTGGCCTGCTGGGGAGGAGCAG
GAGGAGGCGGCGGCGATAGCGGCGGGCGTGGCACCGGGTCTGGCAGATAA
GCTCCTGCACGCGGCGTGGCTCTCGCGGAAGCCGAGCTGGACGCGGACGG
GGACGGGTGGGTCACCCTTGAGGACATCTTCTCTTTCCTGCGTCGGAGGG
CCGCCCTCGCAAACGCCTCCGCCGCCGGGTCTGCACAGGGGGCGGGGCTT
GCCCCTGGGCAGACGCTAGATGACCTGCACAGGGGCCTCCGGGGAGTGCC
GGAGGCCTCTGCTAGCAGGCGGCGGCGACGCACCAAGGGGCCTGGGGTCA
ACGGCGACCCAGGCGTCTGGCCTGCTGGGGAGGAGCAGGAGGAGGCGGCG
GCGATAGCGGCGGGCGTGGCACCGGGTCTGGCAGATAAGCTCCTGCACGC
GGCGTGGTCGGCTCGCGAGGAGGGGGTAGATGTCATGTCCGCCTTGCCAC
ACCCGCCCCCCGAGCACTCCAGCCACAGTGGTGGCGGCGGCGGCGGCGGC
GGCGGCGGCGGCAGAGACGGCAGAGACGACCCCAGCGACTCGGCCCTGGA
CCCAGCGGCTGATCCGGAATCTTCTGTCCTAGGCCCGAGGGCCACTGCAG
CCCTGCTCCGTCACCTTGCCGTTGGTTTCGCCCCACAAGCCCTGCGTTCT
CTTGAGGAGGAACATGCTGCCGCCGCCGCCACCGCCGCTGCCGATGCTTC
CGCCGCTGGCGCGGCTTCACCAGGGGTGGCAACCACACACCATGGCGCGT
GGGGGGGTGGCACCACGGGAGTGCAAGAACGAGGTGGCGGCGGCAGTGGC
GGCAACAGGAGCCGAGATTGGCAGTACAGTGCGTACGGGAACCAAGGAGG
CGGAGGTGAGGGGGATGACGACGAGGACGAGGAGGAGGAGTACGATAGCG
AGACCGCGGGGGGTCGAACCGGGGGCGGCGGCGGCGGCGTCGGCTCGCGA
GGAGGGGGTAGATGTCATGTCCGCCTTGCCACACCCGCCCCCCGAGCACT
CCAGCCACAGTGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGAGAC
GGCAGAGACGACCCCAGCGACTCGGCCCTGGACCCAGCGGCTGATCCGGA
ATCTTCTGTCCTAGGCCCGAGGGCCACTGCAGCCCTGCTCCGTCACCTTG
CCGTTGGTTTCGCCCCACAAGCCCTGCGTTCTCTTGAGGAGGAACATGCT
GCCGCCGCCGCCACCGCCGCTGCCGATGCTTCCGCCGCTGGCGCGGCTTC
ACCAGGGGTGGCAACCACACACCATGGCGCGTGGGGGGGTGGCACCACGG
GAGTGCAAGAACGAGGTGGCGGCGGCAGTGGCGGCAACAGGAGCCGAGAT
TGGCAGTACAGTGCGTACGGGAACCAAGGAGGCGGAGGTGAGGGGGATGA
CGACGAGGACGAGGAGGAGGAGTACGATAGCGAGACCGCGGGGGGTCGAA
CCGGGGGCGGCGGCGGCGGC back to top
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