mRNA_S-ischiensis_contig11.2227.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2227.1 vs. uniprot
Match: A0A6H5KF81_9PHAE (Arf-GAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF81_9PHAE) HSP 1 Score: 232 bits (591), Expect = 2.590e-67 Identity = 205/484 (42.36%), Postives = 236/484 (48.76%), Query Frame = 1
Query: 22 SFPFPQVCFDCPTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSVELDKWKPHELEVMKLGGNGNARTFFRGHGVTDMGKSEQKYHSRAAQMYRTHLKKLLAE-GAQAPPSPQHKKAVDDLSCGLDRLMRDIGQGEGGGGGEEGGTGPGGEH--------PAPDQRVAALARNELSRDRPQPTQSHSAPPSAMSTPPTSQAGPGAPAPPGSSNGTPEEPTPRGVLVVSPXXXXXXX----EQLKAGGSPPTPVVTLTSKSPPKPGAKKLSAKRPGARKKLGAMKIGGGEGGGGVALSGFDEMPVAGAGXXXXXXXXXXAE----DRKMAEKLQAQENLGGGGQASAPSSRLAAAYEATAVSG--------------------------------------------------------------------AGAAADKYKDVKGIGSDMLFGAKEDDPAEVARRQQKVQQYSGSAAISSDMY 1218
S P +VCFDCPTRNPTWASATYGIFICYDCSAVHR+MGVHVTFVRS+ELDKWKP E+EVMK GGNGNAR+FFR HGVTDM KSEQKYHSRAAQMYR HLKK +A+ G PP + VD+++ GLDRLM D+ +G T G P+ D AA A + ++ P SH A P++ S A PAPP + P EP PRG L VSP ++ KA TPVV L S P P +K AK+ GG V LSGF++ A XXXXXXXXXX D +A KL RLA + KYK+VKGIGSDMLFGAK+DDP E ARR K Q+YS SAAISSDMY
Sbjct: 20 SKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKKAMADPGVVTPPQSPREDPVDNVADGLDRLMEDMDGKPAASAPAKGFTNGGXXXXXXXXXXXPSVD---AAAAAAKFAQAFPS---SHPAAPTSGSAAAGGHAAADVPAPPAAPV-KPYEPKPRGSLSVSPPTAPAAAAGAVDEPKA-----TPVVRLISSKSPPPRIRKGGAKKMXXXXXXXXXXX---SGGAAVKLSGFEDTTTAXXXXXXXXXXXXXXXXXDADLALARKLXXXXXXXXXXXXXXX--RLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFDKGKYKNVKGIGSDMLFGAKDDDPDEQARRAMKNQEYSQSAAISSDMY 486
BLAST of mRNA_S-ischiensis_contig11.2227.1 vs. uniprot
Match: A0A835YU03_9STRA (Arf-GAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU03_9STRA) HSP 1 Score: 181 bits (460), Expect = 3.290e-52 Identity = 86/135 (63.70%), Postives = 105/135 (77.78%), Query Frame = 1
Query: 37 QVCFDCPTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSVELDKWKPHELEVMKLGGNGNARTFFRGHGVTDMGKSEQKYHSRAAQMYRTHLKKLLAE----GAQAPPSPQHKKAVDD--LSCGLDRLMRDI 423
+VCFDCPTRNPTWAS TYGIF+CYDCSAVHR+MGVH+TFVRSVELDKW+ EL+ MK GGN AR +F+ HGV+DMGK++ KY SRAA+ YR HLK+L+AE A S + D+ ++CGLDR+MRDI
Sbjct: 27 KVCFDCPTRNPTWASVTYGIFLCYDCSAVHRNMGVHITFVRSVELDKWRQWELDSMKRGGNAAARAYFQSHGVSDMGKTDAKYRSRAAEAYRAHLKQLIAETPDPAADVWNSAHGARDADEAAIACGLDRIMRDI 161
BLAST of mRNA_S-ischiensis_contig11.2227.1 vs. uniprot
Match: A0A4D9D0S2_9STRA (Arf-GAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0S2_9STRA) HSP 1 Score: 174 bits (441), Expect = 7.660e-46 Identity = 85/137 (62.04%), Postives = 100/137 (72.99%), Query Frame = 1
Query: 22 SFPFPQVCFDCPTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSVELDKWKPHELEVMKLGGNGNARTFFRGHGVTDMGKSEQKYHSRAAQMYRTHLKKLLAE------GAQAPPSPQHKKAVDDLSCGLDRLM 414
S P QVCFDCPTRNPTWASATYG+FICY+CSA HR++GVH+TFVRSV+LD+W P +L M+LGGN NA FFR HGVT GK EQKY SRAA++Y+ HL KL+A+ A PP P A + CGLD LM
Sbjct: 19 SRPENQVCFDCPTRNPTWASATYGVFICYNCSATHRALGVHITFVRSVDLDEWTPQQLLTMRLGGNSNAAQFFRRHGVTHGGKVEQKYSSRAAELYKAHLSKLVADKILMDANALEPPPPTDTVAA--VGCGLDNLM 153
BLAST of mRNA_S-ischiensis_contig11.2227.1 vs. uniprot
Match: A0A7S3Y2V3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2V3_HETAK) HSP 1 Score: 166 bits (420), Expect = 8.050e-43 Identity = 82/134 (61.19%), Postives = 100/134 (74.63%), Query Frame = 1
Query: 37 QVCFDCPTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSVELDKWKPHELEVMKLGGNGNARTFFRGHGVTDMGKSEQKYHSRAAQMYRTHLKKL----LAEGAQAPPSPQHKKAVDDLSCGLDRLMRDIG 426
+ CFDCPTRNPTWASATYGIFICYDCS+VHR+MGVH+TFVRS +LD+W+P +LE MKLGGNGNA+ +FR HG T + E+KY R AQMY+THL KL L+EG P P+ K+ D GLD L+ +G
Sbjct: 6 RTCFDCPTRNPTWASATYGIFICYDCSSVHRNMGVHITFVRSCDLDEWRPDQLERMKLGGNGNAKLYFRQHGNTGK-EGERKYTHRVAQMYKTHLDKLVNQKLSEGNNIEPEPEFKQN-DGSVDGLDALLMGLG 137
BLAST of mRNA_S-ischiensis_contig11.2227.1 vs. uniprot
Match: A0A7S2SFF1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFF1_9STRA) HSP 1 Score: 157 bits (396), Expect = 9.900e-42 Identity = 76/126 (60.32%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 37 QVCFDCPTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSVELDKWKPHELEVMKLGGNGNARTFFRGHGVTDMG-KSEQKYHSRAAQMYRTHLKKLLAEGAQAPPSPQHKKAVDDLSCGLDRL 411
++CFDCPTRNPTWASAT+G+F+C DCSA HR MGVHVTFVRSVELD+W +L M++GGNGNA FFR HGV D+ K+E+KY S AA+ Y+ HLKKLL E APP P + V + D L
Sbjct: 35 RICFDCPTRNPTWASATFGVFLCLDCSAAHRRMGVHVTFVRSVELDEWTEKQLRTMEVGGNGNAAAFFRSHGVRDLHIKTEEKYQSSAARHYKNHLKKLLEE---APPKPIETQDVGAKTGATDPL 157
BLAST of mRNA_S-ischiensis_contig11.2227.1 vs. uniprot
Match: A0A7S2B6H1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6H1_9STRA) HSP 1 Score: 161 bits (408), Expect = 2.350e-41 Identity = 80/132 (60.61%), Postives = 99/132 (75.00%), Query Frame = 1
Query: 37 QVCFDCPTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSVELDKWKPHELEVMKLGGNGNARTFFRGHGVTDMG-KSEQKYHSRAAQMYRTHLKKLLA--EGAQAPPSPQHKKAVDDLSCGLDRLMRDI 423
+VCFDC +RNPTWASAT+GIFIC DCSA HR MGVH+TFVRSVELD+W P +L++MK+GGN NA TFFR HGV DM K EQKY S AA+ Y+ HLKKL++ + + P PQ K +VD +D L+ D+
Sbjct: 25 KVCFDCSSRNPTWASATFGIFICLDCSASHRRMGVHITFVRSVELDEWTPDQLKMMKVGGNENAGTFFRSHGVRDMHIKHEQKYVSSAARQYKNHLKKLMSTEDVEEVPEEPQRKPSVD-----IDSLLLDV 151
BLAST of mRNA_S-ischiensis_contig11.2227.1 vs. uniprot
Match: A0A7S1CBA6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBA6_9STRA) HSP 1 Score: 144 bits (362), Expect = 9.700e-38 Identity = 69/137 (50.36%), Postives = 95/137 (69.34%), Query Frame = 1
Query: 22 SFPFPQVCFDCPTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSVELDKWKPHELEVMKLGGNGNARTFFRGHGVTDM--GKSEQKYHSRAAQMYRTHLKKLLAEGAQAPPSPQHKKAVDDLSC-GLDRLMRDI 423
+ P VCFDC RNP+WASAT+G+FIC CSA HR MGVH++FVRS +LDKW P ++E+M++GGN NA FF+ G +D GK E+KYHSRAA +Y+ HL++L+ + + P SP+ A + + GLD L +
Sbjct: 16 ALPGNNVCFDCGARNPSWASATFGVFICIGCSATHRRMGVHISFVRSCDLDKWTPDQMELMRIGGNANAAKFFKTKGWSDATGGKHEEKYHSRAANLYKQHLQRLV-QTSSTPASPEAASAPEGFTIDGLDDLELSV 151
BLAST of mRNA_S-ischiensis_contig11.2227.1 vs. uniprot
Match: A0A7S1CAZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAZ9_9STRA) HSP 1 Score: 144 bits (362), Expect = 9.700e-38 Identity = 68/132 (51.52%), Postives = 94/132 (71.21%), Query Frame = 1
Query: 37 QVCFDCPTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSVELDKWKPHELEVMKLGGNGNARTFFRGHGVTDM--GKSEQKYHSRAAQMYRTHLKKLLAEGAQAPPSPQHKKAVDDLSC-GLDRLMRDI 423
+VCFDC RNP+WASAT+G+FIC CSA HR MGVH++FVRS +LDKW P ++E+M++GGN NA FF+ G +D GK E+KYHSRAA +Y+ HL++L+ + + P SP+ A + + GLD L +
Sbjct: 21 RVCFDCGARNPSWASATFGVFICIGCSATHRRMGVHISFVRSCDLDKWTPDQMELMRIGGNANAAKFFKTKGWSDATGGKHEEKYHSRAANLYKQHLQRLV-QTSSTPASPEAASAPEGFTIDGLDDLELSV 151
BLAST of mRNA_S-ischiensis_contig11.2227.1 vs. uniprot
Match: A0A444EK15_ENSVE (Arf-GAP domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444EK15_ENSVE) HSP 1 Score: 144 bits (363), Expect = 1.180e-37 Identity = 71/125 (56.80%), Postives = 86/125 (68.80%), Query Frame = 1
Query: 40 VCFDCPTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSVELDKWKPHELEVMKLGGNGNARTFFRGHGVTDMGKSEQKYHSRAAQMYRTHLKKLLAEG-AQAPPSPQHKKAVDDLSCGLDRL 411
+CFDC +NPTWAS TYGIF+C DCSAVHRS+GVHV+FVRS LD W P +L+VM GGN A+ FF+ HG TD GK E KY SRAA++YR L K +A+ A+A P A S +DRL
Sbjct: 1 MCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHVSFVRSTNLDSWNPEQLKVMVFGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYRQILSKEVAKSFAEANVLPSSPVATSHTSDAVDRL 125
BLAST of mRNA_S-ischiensis_contig11.2227.1 vs. uniprot
Match: A0A7S3HR90_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HR90_9STRA) HSP 1 Score: 149 bits (377), Expect = 3.970e-37 Identity = 74/132 (56.06%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 37 QVCFDCPTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSVELDKWKPHELEVMKLGGNGNARTFFRGHGVTD--MGKSEQKYHSRAAQMYRTHLKKLLAEGAQAPPSPQHKKAVDDLSC-GLDRLMRDI 423
+VCFDC RNP+WAS TYG+FIC DCSAVHR +GVH+TFVRS +LD+W +L++M++ GNGNAR FF+ HGVTD MG SE+KY S+AA Y HL+KLL +G Q S + V+D GLD L+ +
Sbjct: 27 KVCFDCSARNPSWASVTYGVFICLDCSAVHRRLGVHITFVRSCDLDEWTQEQLDIMRVSGNGNAREFFKKHGVTDAQMG-SEKKYSSKAAPEYLKHLQKLLHDGPQTLRSRSRSEDVNDNHAKGLDGLINSL 157 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2227.1 >prot_S-ischiensis_contig11.2227.1 ID=prot_S-ischiensis_contig11.2227.1|Name=mRNA_S-ischiensis_contig11.2227.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=407bp MQGLSSPSFPFPQVCFDCPTRNPTWASATYGIFICYDCSAVHRSMGVHVTback to top mRNA from alignment at S-ischiensis_contig11:2126043..2127430- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2227.1 ID=mRNA_S-ischiensis_contig11.2227.1|Name=mRNA_S-ischiensis_contig11.2227.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1388bp|location=Sequence derived from alignment at S-ischiensis_contig11:2126043..2127430- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:2126043..2127430- >mRNA_S-ischiensis_contig11.2227.1 ID=mRNA_S-ischiensis_contig11.2227.1|Name=mRNA_S-ischiensis_contig11.2227.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2442bp|location=Sequence derived from alignment at S-ischiensis_contig11:2126043..2127430- (Schizocladia ischiensis KU_0333)back to top |