mRNA_S-ischiensis_contig11.2219.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2219.1 vs. uniprot
Match: A0A6H5KCH1_9PHAE (Mitochondrial inner membrane protease ATP23 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCH1_9PHAE) HSP 1 Score: 215 bits (548), Expect = 1.660e-62 Identity = 103/176 (58.52%), Postives = 127/176 (72.16%), Query Frame = 1
Query: 175 KVKFMIEHIEKLGCVLPPDMFTCRPCGEAQASGGWVFDNK-VEGE-FKPQVVLCEDKPLTQTMVNHTLAHELIHAFDQCRNKVNWNNCLHHACSEIRAANTSGECGYWQEFLRGHPEWGGQQQVCVKRRAELSLKGNPACAHKVRGGLPAFVQAREYVQAAFKSCYYDTEPYDKNP 696
KVKF+ E +EKLGC +P MFTCRPC SGG++ K +G+ + +VVLC DK + QTM++HT+AHELIHA+DQCR K++ NCLH AC+EIRA+NTSGEC + E RGH +WGGQQ+ CVKRRAELS+K P C+ K A EYV +AFK CYYDTEPYDKNP
Sbjct: 43 KVKFIREKLEKLGCEMPTGMFTCRPCEGMDISGGFIPPTKGADGKPSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRTNCLHVACTEIRASNTSGECSFDMEVRRGHLKWGGQQKECVKRRAELSVKATPGCSDK----------AAEYVNSAFKPCYYDTEPYDKNP 208
BLAST of mRNA_S-ischiensis_contig11.2219.1 vs. uniprot
Match: L1ITR7_GUITC (Mitochondrial inner membrane protease ATP23 n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1ITR7_GUITC) HSP 1 Score: 158 bits (400), Expect = 1.380e-41 Identity = 81/173 (46.82%), Postives = 103/173 (59.54%), Query Frame = 1
Query: 178 VKFMIEHIEKLGCVLPPDMFTCRPCGEAQASGGWVFDNKVEGEFKPQVVLCEDKPLTQTMVNHTLAHELIHAFDQCRNKVNWNNCLHHACSEIRAANTSGECGYWQEFLRGHPEWGGQQQVCVKRRAELSLKGNPACAHKVRGGLPAFVQAREYVQAAFKSCYYDTEPYDKNP 696
VKFM+EH+ K GC + F R C E G FD + VVLCE+ T+ HELIHA+D CR V+W NC+HHACSEIRAAN SG+C +WQE LRG+ + GQ + C+KRRA LS+ NPAC+ A A+E V+ AF+ CY DT P+D+ P
Sbjct: 21 VKFMMEHMAKRGCPVDESFFVVRHCDEKVGGG---FDESASRQGG--VVLCENHLRNYAHTEMTMTHELIHAYDHCRAFVDWTNCVHHACSEIRAANLSGDCKWWQEILRGNTAFLGQGRACIKRRAALSVSMNPACS--------APGVAQEAVEKAFERCYADTSPFDRVP 180
BLAST of mRNA_S-ischiensis_contig11.2219.1 vs. uniprot
Match: W7TN46_9STRA (Mitochondrial inner membrane protease ATP23 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN46_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.490e-41 Identity = 80/177 (45.20%), Postives = 113/177 (63.84%), Query Frame = 1
Query: 175 KVKFMIEHIEKLGCVLPPD-MFTCRPCGEAQASGGWVFDNK--VEGEFKPQVVLCEDKPLTQTMVNHTLAHELIHAFDQCRNKVNWNNCLHHACSEIRAANTSGECGYWQEFLRGHPEWGGQQQVCVKRRAELSLKGNPACAHKVRGGLPAFVQAREYVQAAFKSCYYDTEPYDKNP 696
+V+ ++ I LGC + D M CR C A A+GG++ +++ EGE++P++V+CED L V TLAHEL+HA+DQCR KVNW +C H+AC+EIRA+ SGEC + +EF RG+ Q Q CV+RRAELS++ +C + A+E ++ FK CY DT PYDK P
Sbjct: 61 RVRELVGAISDLGCTIDIDTMVECRQCNIA-ATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQSCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDR----------AKEVIEKVFKRCYQDTAPYDKIP 226
BLAST of mRNA_S-ischiensis_contig11.2219.1 vs. uniprot
Match: A0A835Z5N3_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N3_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.920e-39 Identity = 79/181 (43.65%), Postives = 114/181 (62.98%), Query Frame = 1
Query: 175 KVKFMIEHIEKLGCVLPPDMFTCRPCGEAQASGGWVFD-----NKVEGEFKPQVVLCEDKPLT--QTMVNHTLAHELIHAFDQCRNKVNWNNCLHHACSEIRAANTSGECGYWQEFLRGHPEWGGQQQVCVKRRAELSLKGNPACAHKVRGGLPAFVQAREYVQAAFKSCYYDTEPYDKNP 696
+V F+ IEK+GC LP + CR C E+ +GG+ + ++ G+ +P ++LCE+ + Q +V+ TLAHEL+HAFD CR K ++ NCLHHAC+EIRA+N SGEC + E+ RG+ QQ+ CVKRRA LSL NP+C +G Q ++++ AA+ C D EP+D NP
Sbjct: 27 RVTFLKAAIEKMGCKLPDESIECRRCDESM-TGGFTLNAEAGASQQGGKPQPTIILCEEVQIMRQQRVVDSTLAHELVHAFDACRVKADFTNCLHHACTEIRASNLSGECAWKMEWDRGNVAITRQQEKCVKRRAALSLAANPSC----KG------QEQQFIDAAWPFCSRDDEPFDANP 196
BLAST of mRNA_S-ischiensis_contig11.2219.1 vs. uniprot
Match: M2X4K8_GALSU (Mitochondrial inner membrane protease ATP23 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X4K8_GALSU) HSP 1 Score: 150 bits (378), Expect = 7.410e-39 Identity = 78/170 (45.88%), Postives = 101/170 (59.41%), Query Frame = 1
Query: 187 MIEHIEKLGCVLPPDMFTCRPCGEAQASGGWVFDNKVEGEFKPQVVLCEDKPLTQTMVNHTLAHELIHAFDQCRNKVNWNNCLHHACSEIRAANTSGECGYWQEFLRGHPEWGGQQQVCVKRRAELSLKGNPACAHKVRGGLPAFVQAREYVQAAFKSCYYDTEPYDKNP 696
M+E I K GC LP + C+ C EA GG+ D V VLC + L+Q N TL HEL+HAFDQCR VNW++C HHACSEIRAA SG+C + +EF RGH Q Q C++RRAE+S++ NP C+ +QA+E V A+ C+ DT P+D P
Sbjct: 1 MLEQIRKAGCYLPEERILCQYC-EAAVGGGFQDDGSV--------VLCSNHLLSQDHANITLVHELVHAFDQCRAHVNWSDCTHHACSEIRAALLSGDCDWKREFWRGHLGLRAQFQKCIRRRAEISVRMNPNCSP---------LQAKEAVNRAWDICFADTAPFDGIP 152
BLAST of mRNA_S-ischiensis_contig11.2219.1 vs. uniprot
Match: A0A3R7KD77_9STRA (Mitochondrial inner membrane protease ATP23 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KD77_9STRA) HSP 1 Score: 151 bits (382), Expect = 7.700e-39 Identity = 75/174 (43.10%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 175 KVKFMIEHIEKLGCVLPPDMFTCRPCGEAQASGGWVFDNKVEGEFKPQVVLCEDKPLTQTMVNHTLAHELIHAFDQCRNKVNWNNCLHHACSEIRAANTSGECGYWQEFLRGHPEWGGQQQVCVKRRAELSLKGNPACAHKVRGGLPAFVQAREYVQAAFKSCYYDTEPYDKNP 696
+VKF+++ +EK+GC + F+ C E + +GG+ D+K KP VVLC++ Q ++ T+AHELIHA+D CRNK++WNNC HHACSEIRAA SG+C + EF R + Q Q+C +RRA+LS++ N AC KV E ++ F +CY D PY + P
Sbjct: 38 RVKFLVDIMEKMGCKMETGFFSSVDC-EGKINGGFHLDDK----RKPGVVLCQNHIPDQEWMDRTVAHELIHAYDHCRNKIDWNNCEHHACSEIRAAALSGDCNWKYEFFRKNFNVNQQHQICTRRRAKLSIEQNGACKGKVD----------ECIEKVFDTCYRDVSPYREIP 196
BLAST of mRNA_S-ischiensis_contig11.2219.1 vs. uniprot
Match: A0A7S3DJI5_9EUKA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DJI5_9EUKA) HSP 1 Score: 151 bits (381), Expect = 1.430e-38 Identity = 77/178 (43.26%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 178 VKFMIEHIEKLGCVLPPDMFTCRPCGEAQASGGWVFDNK-----VEGEFKPQVVLCEDKPLTQTMVNHTLAHELIHAFDQCRNKVNWNNCLHHACSEIRAANTSGECGYWQEFLRGHPEWGGQQQVCVKRRAELSLKGNPACAHKVRGGLPAFVQAREYVQAAFKSCYYDTEPYDKNP 696
V F+++ EK GC C CG A+GG++ DN+ + + Q+V+CE+ PL+Q N+TL+HELIHA D CR K+NW++ HACSEIRA+N SGEC +WQE RG+ Q Q CVKRRA LS+ NP+C K A V+ F C+ DT P+D+ P
Sbjct: 39 VDFLLQAFEKAGCGALS--IECSNCGSMAATGGFIADNERHLDPSKADKPRQIVMCENVPLSQGRFNNTLSHELIHAIDDCRAKMNWSDLRQHACSEIRASNLSGECKFWQEVFRGNFGIKKQHQACVKRRAALSVAMNPSCKDKE--------MAEMVVEEVFPQCFEDTVPFDRVP 206
BLAST of mRNA_S-ischiensis_contig11.2219.1 vs. uniprot
Match: A0A225W3F1_9STRA (Mitochondrial inner membrane protease ATP23 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A225W3F1_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.510e-38 Identity = 75/174 (43.10%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 175 KVKFMIEHIEKLGCVLPPDMFTCRPCGEAQASGGWVFDNKVEGEFKPQVVLCEDKPLTQTMVNHTLAHELIHAFDQCRNKVNWNNCLHHACSEIRAANTSGECGYWQEFLRGHPEWGGQQQVCVKRRAELSLKGNPACAHKVRGGLPAFVQAREYVQAAFKSCYYDTEPYDKNP 696
+VKF+++ +EK+GC L P F+ C E + +GG+ D+ E KP VVLC++ Q ++ T+AHELIHAFD CRNK++WN C HHACSEIRAA SG+C + EF R + Q Q+C +RRA+LS++ N AC + +A E + F +CY D P+ + P
Sbjct: 38 RVKFLVDAMEKMGCSLQPGFFSSVNC-EGKINGGFHLDD----EGKPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVNKQHQLCTRRRAKLSIEQNEACKGR---------RADECIDKVFDNCYRDWSPFREIP 197
BLAST of mRNA_S-ischiensis_contig11.2219.1 vs. uniprot
Match: A0A8H7PCQ1_MORIS (Mitochondrial inner membrane protease ATP23 (Fragment) n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PCQ1_MORIS) HSP 1 Score: 150 bits (379), Expect = 7.370e-38 Identity = 74/174 (42.53%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 175 KVKFMIEHIEKLGCVLPPDMFTCRPCGEAQASGGWVFDNKVEGEFKPQ--VVLCEDKPLTQTMVNHTLAHELIHAFDQCRNKVNWNNCLHHACSEIRAANTSGECGYWQEFLRGHPEWGGQQQVCVKRRAELSLKGNPACAHKVRGGLPAFVQAREYVQAAFKSCYYDTEPYDK 690
V+FM+E+++K+GC + + F C PC E ++ G F PQ ++LC+++ ++ T+ HE+IH FD CR KV+W+NC HHACSEIRAA+ SG+C + +E RG + Q Q CVKRRA LS++ NPACA + G A V + F+SC+ DT PYD+
Sbjct: 85 NVRFMLENLQKVGCAMKKEDFKCMPCDETRSGG-----------FSPQDGILLCQNRFFSKKHQEDTMVHEMIHMFDNCRFKVDWSNCKHHACSEIRAASLSGDCRWTREVRRGFYTFTKQHQACVKRRAILSVRQNPACADE---GC-----AERAVHSVFESCFADTRPYDE 239
BLAST of mRNA_S-ischiensis_contig11.2219.1 vs. uniprot
Match: M4B1W1_HYAAE (Mitochondrial inner membrane protease ATP23 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1W1_HYAAE) HSP 1 Score: 148 bits (374), Expect = 1.020e-37 Identity = 74/174 (42.53%), Postives = 105/174 (60.34%), Query Frame = 1
Query: 175 KVKFMIEHIEKLGCVLPPDMFTCRPCGEAQASGGWVFDNKVEGEFKPQVVLCEDKPLTQTMVNHTLAHELIHAFDQCRNKVNWNNCLHHACSEIRAANTSGECGYWQEFLRGHPEWGGQQQVCVKRRAELSLKGNPACAHKVRGGLPAFVQAREYVQAAFKSCYYDTEPYDKNP 696
+VKF+++ IEK GC + P F+ C E+ +GG+ D+ E KP VVLC++ Q ++ T+AHELIHAFD CRNK++WN C HH CSE+RAA SG+C + EF R + Q Q+C +RRA+LS++ N AC + A E ++ F SCY D P+ + P
Sbjct: 38 RVKFLVDAIEKGGCKIEPGFFSSIHC-ESDINGGFHLDD----EGKPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHTCSEVRAAALSGDCNWKYEFFRKNFNVSKQHQICTRRRAKLSVEQNEACKGR----------ADECIEQVFDSCYRDWSPFREIP 196 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2219.1 >prot_S-ischiensis_contig11.2219.1 ID=prot_S-ischiensis_contig11.2219.1|Name=mRNA_S-ischiensis_contig11.2219.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=172bp MIEHIEKLGCVLPPDMFTCRPCGEAQASGGWVFDNKVEGEFKPQVVLCEDback to top mRNA from alignment at S-ischiensis_contig11:2067105..2072259- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2219.1 ID=mRNA_S-ischiensis_contig11.2219.1|Name=mRNA_S-ischiensis_contig11.2219.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5155bp|location=Sequence derived from alignment at S-ischiensis_contig11:2067105..2072259- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:2067105..2072259- >mRNA_S-ischiensis_contig11.2219.1 ID=mRNA_S-ischiensis_contig11.2219.1|Name=mRNA_S-ischiensis_contig11.2219.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1032bp|location=Sequence derived from alignment at S-ischiensis_contig11:2067105..2072259- (Schizocladia ischiensis KU_0333)back to top |