mRNA_S-ischiensis_contig11.2157.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: D7FWD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD2_ECTSI) HSP 1 Score: 276 bits (705), Expect = 1.080e-87 Identity = 153/313 (48.88%), Postives = 207/313 (66.13%), Query Frame = 3
Query: 45 MFYDLNVPVLRTGDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGML-------------PARGQASGEGPGFPVQLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARRGQFTGLGVHPGGKGKAKAGGLLESLRLPSPETYMPVARPVGG 944
MF+DLNVPVLR+ R R L+ QLF +GYDC+AL T++YG+L +QHRC +E + D + G+R P G + GP Q++RLT V+++ +AQ LTAG++ +QSYD+VAA P + F+ LC+++DVD+I + +RLPF ++KK TD AL+RG VFE+ Y +AIQN+S+RR LL+N + LV+FTRGRGILL+S AET L R PHDV+NLGQL+GL+QEQ+LRAVS+T A + RAEAR+G+F G V GG A A LLESL++P E Y+P A V G
Sbjct: 1 MFFDLNVPVLRSSVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVERIHFDPEAASAVGSRXXXXXXXXXXXXXXXXXXXXXXXAAPGHGATAASGPD---QVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVSYSQAIQNSSNRRFLLSNCEALVTFTRGRGILLASGAETWLNCRSPHDVANLGQLLGLSQEQSLRAVSDTPLAVLRRAEARKGRFRGATVS-GGDDPAPAQ-LLESLQIPK-EFYLPEAAAVVG 307
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: A0A1Y2GUE3_9FUNG (RNase P subunit p30-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GUE3_9FUNG) HSP 1 Score: 160 bits (404), Expect = 1.680e-43 Identity = 100/266 (37.59%), Postives = 139/266 (52.26%), Query Frame = 3
Query: 45 MFYDLNVPVLRT-GDARARV------KLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPV-QLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARR 818
MFYDLN+PV T G A+A K VE L GY +A V G++ H I ++L PG + Q +RLT VVD++++ L GN + SYD++A QPTN K+F C +VDII + S RLPF + LA+ RG+ FE+CY AI++AS+RR+L++N Q L+ TRG+ I+LSS A A++ RGP+D+ N G L+GL Q A +S A + AE RR
Sbjct: 1 MFYDLNLPVSATPGSAQAAQEQLETRKRVELLNHLGYQAVAYNHEVTGKIGNNHINPITKLNL---------------------------------PGINLKQYSRLTLVVDDVSQNYGLNTGNPTISSYDIIAVQPTNEKLFQAACGTFEVDIISLDMSARLPFYLKHSTVGLAIERGIYFELCYSAAIRDASARRNLISNAQSLIRVTRGKNIILSSQAMRAMELRGPYDIVNFGTLLGLNQATAKDCLSSHCRAVAMHAETRR 233
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: A0A7C9ES22_OPUST (Uncharacterized protein (Fragment) n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ES22_OPUST) HSP 1 Score: 161 bits (408), Expect = 4.180e-43 Identity = 97/277 (35.02%), Postives = 150/277 (54.15%), Query Frame = 3
Query: 15 G*SCVLVKVVMFYDLNVPVL--------RTGDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPV-QLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARR 818
G +C K+ F+DLN+P L ++ + R++L+ + GY IA + G + RC I P L + PSL A + + G P P Q TRLT +V+ +A L +GN V++SYDLVA +P N FD+ C+ + V++I I +++LPF + A+ARGV FEI Y +++ +RR L+AN ++LV +TRG+ +++SSAA + L RGP+DVSNL L+GL+ E A A+S+ + A +R
Sbjct: 17 GENCEREKM-QFFDLNIPYLEGDKSIPDKSAKKQNRLRLIIKAMELGYAGIAYNRTIKGAMSESDRCSIPPFPLSSL------LNAAPSLSFA---VSFHRRLLGVPPTAPFRQYTRLTVIVETSAQASALNSGNPVLKSYDLVAVRPLNQNCFDHACQSSQVELISINFAEKLPFRLKLPMVKAAIARGVTFEITYSSLMEDVQARRQLIANAKLLVEWTRGKNLIISSAASSVLALRGPNDVSNLSSLLGLSNEHAKAAISKNCRLLLANALRKR 283
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: A0A397T3L6_9GLOM (RNase P subunit p30-domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397T3L6_9GLOM) HSP 1 Score: 158 bits (399), Expect = 1.640e-42 Identity = 96/265 (36.23%), Postives = 149/265 (56.23%), Query Frame = 3
Query: 45 MFYDLNVPV-LRTGDARARV---KLVEQLFAYGYDCIALTTLVYGQLQRQH---RCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPVQLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARR 818
MFYDLN+P ++ A + K ++ L +GY +A ++ G+L + + + + +S D+ PS GQ E QL+R+T V+++ ++ L++ N ++ SYD+VAAQPTN K+F +C +VDII + RLPF + LA+ RGV FEICY AI++++SRR L++N Q LV TRG+ I++SS A+ A++ RGP+D+ NLG +MG+ Q A VS A V+ A+ RR
Sbjct: 1 MFYDLNLPYPVQPNLAHQQTEFHKRIDLLIKFGYQVVAYNHIITGKLDKANPIRKLETYNISPDS-----------PS-----------GQQKIE------QLSRVTVVIEDASQNYGLSSTNSIISSYDIVAAQPTNEKIFQNICGTLEVDIISLEMGSRLPFYIKHGPVGLAIERGVYFEICYAPAIRDSASRRQLISNAQSLVRVTRGKNIIISSEAQKAMELRGPYDIVNLGTIMGMNQATAKDCVSTNCRAVVMHAKTRR 237
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: A0A176WN56_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WN56_MARPO) HSP 1 Score: 160 bits (406), Expect = 1.710e-42 Identity = 93/262 (35.50%), Postives = 141/262 (53.82%), Query Frame = 3
Query: 45 MFYDLNVPVLRTGDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLD----AARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPVQLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARR 818
MF+DLN+PV G+ AR ++V GY +A V G + RC+I P+ L AA A+ +L LP R Q +R+T ++ MN+A + + N V+++YDLVA QPTN K+F++ C + +VD+I + +QR+PF + K A+ RG+ FEICY RA+ + +RR L N+ L S GR I++ S A A++ RGP+DV+N+ L G T E A +S T + +L R+
Sbjct: 1 MFFDLNLPVDGVGEL-ARREVVAMALQLGYSGVAANHFVTGVMGETDRCRIRPLELQFILAAAPAVAETAKFHQKVLGVPQGLPFR------------QFSRITVFLETMNQANTINSANPVLKTYDLVAVQPTNLKMFNHACTKLEVDLISLDFTQRVPFRMKKAIVKAAVERGIYFEICYGRALSDQKARRELFTNSMTLQSAAGGRNIVVCSGARRAMEMRGPNDVANMSILFGFTSESAKNTISRTCKSLLLHGITRK 249
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: A0A803PWF3_CANSA (Uncharacterized protein n=5 Tax=Cannabis sativa TaxID=3483 RepID=A0A803PWF3_CANSA) HSP 1 Score: 164 bits (415), Expect = 3.180e-42 Identity = 99/272 (36.40%), Postives = 151/272 (55.51%), Query Frame = 3
Query: 24 CVLVKVVM-FYDLNVPVLRT--GDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPV-QLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARRGQF 827
CV + V M F+DLN+P L D R+KL GY +A + G + + RC I ++L + + K S+ RG+L G P Q TRLT D+ ++AQ L +GN ++++YDLV+ +P N +FD C +VDII I S++LPF + A+ RGV FEI Y I + +RR ++ + ++LV +TRG+ +++SSAA + + RGP+DV+NL L+GL+ EQA AVS+ A + +A R+ QF
Sbjct: 24 CVFIGVGMGFFDLNIPYLEALPSDKATRIKLATMAMELGYSGVAYNRTIKGVMSERDRCSIPLLTLSS--LLKLSPSLASSVYFHRGLL-------GVPNASPFRQYTRLTVNADSPSQAQALNSGNPILKTYDLVSVRPLNQTIFDQACERLEVDIIAIDFSEKLPFRLKLPMVKAAIKRGVFFEITYSNLIIDIQARRQMITSAKLLVDWTRGKNLIISSAASSVFELRGPYDVANLSFLLGLSLEQAKAAVSKNCRALITKA-LRKKQF 285
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: U9UDQ0_RHIID (Ribonuclease P complex subunit Pop2 n=8 Tax=Rhizophagus TaxID=1129544 RepID=U9UDQ0_RHIID) HSP 1 Score: 156 bits (394), Expect = 1.020e-41 Identity = 95/266 (35.71%), Postives = 143/266 (53.76%), Query Frame = 3
Query: 45 MFYDLNVPV-----LRTGDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQ---HRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPVQLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARR 818
MFYDLN+P L R K V+ L +GY +A V G+L + H+ + S D+ P+ Q E QL+R+T V+++ ++ L++ N ++ SYD+VAAQPTN K+F +C +VDI+ + RLPF + LA+ RGV FEICY AI++++SRR L++N Q LV TRG+ I+++S A+ A++ RGP+D+ NLG +MG+ Q A +S A V+ A RR
Sbjct: 1 MFYDLNLPYPTQPNLAQQQTELR-KRVDLLIKFGYQVVAYNHTVTGKLDKANPIHKFETYNNSPDS---------------------PSGQQQKIE------QLSRITVVIEDASQNYGLSSANSIISSYDIVAAQPTNEKIFQNVCGTLEVDIVSLEMGSRLPFYIKHGPVGLAIERGVYFEICYAPAIRDSASRRQLISNAQSLVRVTRGKNIIITSEAQRAMELRGPYDIVNLGTIMGMNQAMAKDCISTNCRAVVMHAITRR 238
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: A0A6P8E8C8_PUNGR (ribonuclease P protein subunit drpp30 isoform X1 n=4 Tax=Punica granatum TaxID=22663 RepID=A0A6P8E8C8_PUNGR) HSP 1 Score: 162 bits (411), Expect = 1.390e-41 Identity = 99/266 (37.22%), Postives = 148/266 (55.64%), Query Frame = 3
Query: 48 FYDLNVPVLRTGDARA-RVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPV-----QLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARRGQF 827
F+DLN+P + +A R+KL + GY IA + G + + RC I +SL SLL+A L + G P Q TRLT + D++ +AQ L +GN V++SYDLVA +P N FDY C +++VDII I S+ LPF V K + A++RGV FEI Y R I +A R +++N ++LV+ TRG+ +++SSAA + + RGP+DV+N L+GL E+A VS +T++ R+ +F
Sbjct: 3 FFDLNIPYESSASNKANRIKLATKAMELGYGGIAYNHAMKGVMSERDRCSIPLLSLS-------------SLLKAAPSLSLSVSHHRDLLGVPRSSPFHQYTRLTVLADSLAQAQALNSGNHVLKSYDLVAVRPLNQTAFDYACEKSEVDIIAIDFSEYLPFRVKKPMVNAAISRGVYFEITYSRIIADAQVRNQMMSNIKLLVNCTRGKNLIVSSAAASVTEIRGPYDVANFLSLIGLPMERAKPCVSRNC-STLIANSLRKKRF 254
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: UPI001CC4615C (protein GAMETOPHYTE DEFECTIVE 1 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC4615C) HSP 1 Score: 162 bits (411), Expect = 1.760e-41 Identity = 102/276 (36.96%), Postives = 145/276 (52.54%), Query Frame = 3
Query: 48 FYDLNVPVL-----------RTGDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPV-----QLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARRGQF 827
F+DLNVP L ++G AR+K V + GY +A + G + RC I L SLL+A L + E G P+ Q TRLT VVD +A L +GN V++SYDLVA +P N F+ C ++VDII I SQRLPF + A+ RG+ FEI Y I + +RR L++N ++LV +TRG+ +++SSAA T + RGP+DV+NL L+GL+ E+A A+S+ A V A ++ F
Sbjct: 3 FFDLNVPYLEGGGSEKSISDKSGKKSARLKFVVKAMEMGYTGVAYNRSMTGIMSDSDRCTISLFPLS-------------SLLKAAPTLSTSVKFHREILGVPLNSPFRQYTRLTVVVDTPRQADALNSGNPVLKSYDLVAVRPLNQLAFERACNVSEVDIIAIDFSQRLPFRLKLPLVKAAMERGIYFEIVYSHLISDVQARRQLISNAKLLVDWTRGKNLIVSSAALTVNELRGPYDVANLSMLLGLSMERAKEAISKNCRALVANALKKKQWF 265
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: UPI0010A4E372 (uncharacterized protein LOC114716268 isoform X1 n=3 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4E372) HSP 1 Score: 161 bits (408), Expect = 2.500e-41 Identity = 104/271 (38.38%), Postives = 145/271 (53.51%), Query Frame = 3
Query: 48 FYDLNVPVLR---TGDA---RARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPV-----QLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARRGQF 827
F+DLN+P L T A R R K+V + GY IA + G + HRC I ++L SLL+ L + + G P Q TRLT DN ++AQ L +GN ++++YDLVA +P N VFD C +VDII + S +LPF + A+ RGV FEI Y I + RR L+ N ++LV +TRGR I+LSSAA +A + RGP+DV+NL L+GL+ E+A A+S T T+L R+ Q+
Sbjct: 3 FFDLNIPYLEPSLTDKATLQRQRTKIVVKAMELGYTGIAYNRTIKGVMSDSHRCCIPLLTLS-------------SLLKVAPSLSLSVKLHRDVLGIPSAAPFRQYTRLTVCADNPSQAQALNSGNPILKTYDLVAVRPLNQTVFDQACERMEVDIISMDFSGKLPFRLKHPMVKAAVERGVCFEIIYSGLITDPQIRRQLICNAKLLVDWTRGRNIILSSAAPSANELRGPYDVANLSSLLGLSMEKAKAAIS-TNCRTLLTKSLRKKQY 259 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2157.1 >prot_S-ischiensis_contig11.2157.1 ID=prot_S-ischiensis_contig11.2157.1|Name=mRNA_S-ischiensis_contig11.2157.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=312bp MFYDLNVPVLRTGDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQback to top mRNA from alignment at S-ischiensis_contig11:1676765..1680424+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2157.1 ID=mRNA_S-ischiensis_contig11.2157.1|Name=mRNA_S-ischiensis_contig11.2157.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3660bp|location=Sequence derived from alignment at S-ischiensis_contig11:1676765..1680424+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:1676765..1680424+ >mRNA_S-ischiensis_contig11.2157.1 ID=mRNA_S-ischiensis_contig11.2157.1|Name=mRNA_S-ischiensis_contig11.2157.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1872bp|location=Sequence derived from alignment at S-ischiensis_contig11:1676765..1680424+ (Schizocladia ischiensis KU_0333)back to top |