mRNA_S-ischiensis_contig11.2157.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2157.1
Unique NamemRNA_S-ischiensis_contig11.2157.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: D7FWD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD2_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 1.080e-87
Identity = 153/313 (48.88%), Postives = 207/313 (66.13%), Query Frame = 3
Query:   45 MFYDLNVPVLRTGDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGML-------------PARGQASGEGPGFPVQLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARRGQFTGLGVHPGGKGKAKAGGLLESLRLPSPETYMPVARPVGG 944
            MF+DLNVPVLR+   R R  L+ QLF +GYDC+AL T++YG+L +QHRC +E +  D    +  G+R                         P  G  +  GP    Q++RLT V+++  +AQ LTAG++ +QSYD+VAA P   + F+ LC+++DVD+I +   +RLPF ++KK TD AL+RG VFE+ Y +AIQN+S+RR LL+N + LV+FTRGRGILL+S AET L  R PHDV+NLGQL+GL+QEQ+LRAVS+T  A + RAEAR+G+F G  V  GG   A A  LLESL++P  E Y+P A  V G
Sbjct:    1 MFFDLNVPVLRSSVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVERIHFDPEAASAVGSRXXXXXXXXXXXXXXXXXXXXXXXAAPGHGATAASGPD---QVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVSYSQAIQNSSNRRFLLSNCEALVTFTRGRGILLASGAETWLNCRSPHDVANLGQLLGLSQEQSLRAVSDTPLAVLRRAEARKGRFRGATVS-GGDDPAPAQ-LLESLQIPK-EFYLPEAAAVVG 307          
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: A0A1Y2GUE3_9FUNG (RNase P subunit p30-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GUE3_9FUNG)

HSP 1 Score: 160 bits (404), Expect = 1.680e-43
Identity = 100/266 (37.59%), Postives = 139/266 (52.26%), Query Frame = 3
Query:   45 MFYDLNVPVLRT-GDARARV------KLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPV-QLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARR 818
            MFYDLN+PV  T G A+A        K VE L   GY  +A    V G++   H   I  ++L                                 PG  + Q +RLT VVD++++   L  GN  + SYD++A QPTN K+F   C   +VDII +  S RLPF +      LA+ RG+ FE+CY  AI++AS+RR+L++N Q L+  TRG+ I+LSS A  A++ RGP+D+ N G L+GL Q  A   +S    A  + AE RR
Sbjct:    1 MFYDLNLPVSATPGSAQAAQEQLETRKRVELLNHLGYQAVAYNHEVTGKIGNNHINPITKLNL---------------------------------PGINLKQYSRLTLVVDDVSQNYGLNTGNPTISSYDIIAVQPTNEKLFQAACGTFEVDIISLDMSARLPFYLKHSTVGLAIERGIYFELCYSAAIRDASARRNLISNAQSLIRVTRGKNIILSSQAMRAMELRGPYDIVNFGTLLGLNQATAKDCLSSHCRAVAMHAETRR 233          
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: A0A7C9ES22_OPUST (Uncharacterized protein (Fragment) n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ES22_OPUST)

HSP 1 Score: 161 bits (408), Expect = 4.180e-43
Identity = 97/277 (35.02%), Postives = 150/277 (54.15%), Query Frame = 3
Query:   15 G*SCVLVKVVMFYDLNVPVL--------RTGDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPV-QLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARR 818
            G +C   K+  F+DLN+P L        ++   + R++L+ +    GY  IA    + G +    RC I P  L +           PSL  A   +    +  G  P  P  Q TRLT +V+   +A  L +GN V++SYDLVA +P N   FD+ C+ + V++I I  +++LPF +       A+ARGV FEI Y   +++  +RR L+AN ++LV +TRG+ +++SSAA + L  RGP+DVSNL  L+GL+ E A  A+S+     +  A  +R
Sbjct:   17 GENCEREKM-QFFDLNIPYLEGDKSIPDKSAKKQNRLRLIIKAMELGYAGIAYNRTIKGAMSESDRCSIPPFPLSSL------LNAAPSLSFA---VSFHRRLLGVPPTAPFRQYTRLTVIVETSAQASALNSGNPVLKSYDLVAVRPLNQNCFDHACQSSQVELISINFAEKLPFRLKLPMVKAAIARGVTFEITYSSLMEDVQARRQLIANAKLLVEWTRGKNLIISSAASSVLALRGPNDVSNLSSLLGLSNEHAKAAISKNCRLLLANALRKR 283          
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: A0A397T3L6_9GLOM (RNase P subunit p30-domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397T3L6_9GLOM)

HSP 1 Score: 158 bits (399), Expect = 1.640e-42
Identity = 96/265 (36.23%), Postives = 149/265 (56.23%), Query Frame = 3
Query:   45 MFYDLNVPV-LRTGDARARV---KLVEQLFAYGYDCIALTTLVYGQLQRQH---RCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPVQLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARR 818
            MFYDLN+P  ++   A  +    K ++ L  +GY  +A   ++ G+L + +   + +   +S D+           PS           GQ   E      QL+R+T V+++ ++   L++ N ++ SYD+VAAQPTN K+F  +C   +VDII +    RLPF +      LA+ RGV FEICY  AI++++SRR L++N Q LV  TRG+ I++SS A+ A++ RGP+D+ NLG +MG+ Q  A   VS    A V+ A+ RR
Sbjct:    1 MFYDLNLPYPVQPNLAHQQTEFHKRIDLLIKFGYQVVAYNHIITGKLDKANPIRKLETYNISPDS-----------PS-----------GQQKIE------QLSRVTVVIEDASQNYGLSSTNSIISSYDIVAAQPTNEKIFQNICGTLEVDIISLEMGSRLPFYIKHGPVGLAIERGVYFEICYAPAIRDSASRRQLISNAQSLVRVTRGKNIIISSEAQKAMELRGPYDIVNLGTIMGMNQATAKDCVSTNCRAVVMHAKTRR 237          
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: A0A176WN56_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WN56_MARPO)

HSP 1 Score: 160 bits (406), Expect = 1.710e-42
Identity = 93/262 (35.50%), Postives = 141/262 (53.82%), Query Frame = 3
Query:   45 MFYDLNVPVLRTGDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLD----AARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPVQLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARR 818
            MF+DLN+PV   G+  AR ++V      GY  +A    V G +    RC+I P+ L     AA      A+    +L     LP R            Q +R+T  ++ MN+A  + + N V+++YDLVA QPTN K+F++ C + +VD+I +  +QR+PF + K     A+ RG+ FEICY RA+ +  +RR L  N+  L S   GR I++ S A  A++ RGP+DV+N+  L G T E A   +S T  + +L    R+
Sbjct:    1 MFFDLNLPVDGVGEL-ARREVVAMALQLGYSGVAANHFVTGVMGETDRCRIRPLELQFILAAAPAVAETAKFHQKVLGVPQGLPFR------------QFSRITVFLETMNQANTINSANPVLKTYDLVAVQPTNLKMFNHACTKLEVDLISLDFTQRVPFRMKKAIVKAAVERGIYFEICYGRALSDQKARRELFTNSMTLQSAAGGRNIVVCSGARRAMEMRGPNDVANMSILFGFTSESAKNTISRTCKSLLLHGITRK 249          
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: A0A803PWF3_CANSA (Uncharacterized protein n=5 Tax=Cannabis sativa TaxID=3483 RepID=A0A803PWF3_CANSA)

HSP 1 Score: 164 bits (415), Expect = 3.180e-42
Identity = 99/272 (36.40%), Postives = 151/272 (55.51%), Query Frame = 3
Query:   24 CVLVKVVM-FYDLNVPVLRT--GDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPV-QLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARRGQF 827
            CV + V M F+DLN+P L     D   R+KL       GY  +A    + G +  + RC I  ++L +  + K       S+   RG+L       G     P  Q TRLT   D+ ++AQ L +GN ++++YDLV+ +P N  +FD  C   +VDII I  S++LPF +       A+ RGV FEI Y   I +  +RR ++ + ++LV +TRG+ +++SSAA +  + RGP+DV+NL  L+GL+ EQA  AVS+   A + +A  R+ QF
Sbjct:   24 CVFIGVGMGFFDLNIPYLEALPSDKATRIKLATMAMELGYSGVAYNRTIKGVMSERDRCSIPLLTLSS--LLKLSPSLASSVYFHRGLL-------GVPNASPFRQYTRLTVNADSPSQAQALNSGNPILKTYDLVSVRPLNQTIFDQACERLEVDIIAIDFSEKLPFRLKLPMVKAAIKRGVFFEITYSNLIIDIQARRQMITSAKLLVDWTRGKNLIISSAASSVFELRGPYDVANLSFLLGLSLEQAKAAVSKNCRALITKA-LRKKQF 285          
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: U9UDQ0_RHIID (Ribonuclease P complex subunit Pop2 n=8 Tax=Rhizophagus TaxID=1129544 RepID=U9UDQ0_RHIID)

HSP 1 Score: 156 bits (394), Expect = 1.020e-41
Identity = 95/266 (35.71%), Postives = 143/266 (53.76%), Query Frame = 3
Query:   45 MFYDLNVPV-----LRTGDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQ---HRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPVQLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARR 818
            MFYDLN+P      L       R K V+ L  +GY  +A    V G+L +    H+ +    S D+                     P+  Q   E      QL+R+T V+++ ++   L++ N ++ SYD+VAAQPTN K+F  +C   +VDI+ +    RLPF +      LA+ RGV FEICY  AI++++SRR L++N Q LV  TRG+ I+++S A+ A++ RGP+D+ NLG +MG+ Q  A   +S    A V+ A  RR
Sbjct:    1 MFYDLNLPYPTQPNLAQQQTELR-KRVDLLIKFGYQVVAYNHTVTGKLDKANPIHKFETYNNSPDS---------------------PSGQQQKIE------QLSRITVVIEDASQNYGLSSANSIISSYDIVAAQPTNEKIFQNVCGTLEVDIVSLEMGSRLPFYIKHGPVGLAIERGVYFEICYAPAIRDSASRRQLISNAQSLVRVTRGKNIIITSEAQRAMELRGPYDIVNLGTIMGMNQAMAKDCISTNCRAVVMHAITRR 238          
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: A0A6P8E8C8_PUNGR (ribonuclease P protein subunit drpp30 isoform X1 n=4 Tax=Punica granatum TaxID=22663 RepID=A0A6P8E8C8_PUNGR)

HSP 1 Score: 162 bits (411), Expect = 1.390e-41
Identity = 99/266 (37.22%), Postives = 148/266 (55.64%), Query Frame = 3
Query:   48 FYDLNVPVLRTGDARA-RVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPV-----QLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARRGQF 827
            F+DLN+P   +   +A R+KL  +    GY  IA    + G +  + RC I  +SL              SLL+A   L        +  G P      Q TRLT + D++ +AQ L +GN V++SYDLVA +P N   FDY C +++VDII I  S+ LPF V K   + A++RGV FEI Y R I +A  R  +++N ++LV+ TRG+ +++SSAA +  + RGP+DV+N   L+GL  E+A   VS    +T++    R+ +F
Sbjct:    3 FFDLNIPYESSASNKANRIKLATKAMELGYGGIAYNHAMKGVMSERDRCSIPLLSLS-------------SLLKAAPSLSLSVSHHRDLLGVPRSSPFHQYTRLTVLADSLAQAQALNSGNHVLKSYDLVAVRPLNQTAFDYACEKSEVDIIAIDFSEYLPFRVKKPMVNAAISRGVYFEITYSRIIADAQVRNQMMSNIKLLVNCTRGKNLIVSSAAASVTEIRGPYDVANFLSLIGLPMERAKPCVSRNC-STLIANSLRKKRF 254          
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: UPI001CC4615C (protein GAMETOPHYTE DEFECTIVE 1 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC4615C)

HSP 1 Score: 162 bits (411), Expect = 1.760e-41
Identity = 102/276 (36.96%), Postives = 145/276 (52.54%), Query Frame = 3
Query:   48 FYDLNVPVL-----------RTGDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPV-----QLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARRGQF 827
            F+DLNVP L           ++G   AR+K V +    GY  +A    + G +    RC I    L              SLL+A   L    +   E  G P+     Q TRLT VVD   +A  L +GN V++SYDLVA +P N   F+  C  ++VDII I  SQRLPF +       A+ RG+ FEI Y   I +  +RR L++N ++LV +TRG+ +++SSAA T  + RGP+DV+NL  L+GL+ E+A  A+S+   A V  A  ++  F
Sbjct:    3 FFDLNVPYLEGGGSEKSISDKSGKKSARLKFVVKAMEMGYTGVAYNRSMTGIMSDSDRCTISLFPLS-------------SLLKAAPTLSTSVKFHREILGVPLNSPFRQYTRLTVVVDTPRQADALNSGNPVLKSYDLVAVRPLNQLAFERACNVSEVDIIAIDFSQRLPFRLKLPLVKAAMERGIYFEIVYSHLISDVQARRQLISNAKLLVDWTRGKNLIVSSAALTVNELRGPYDVANLSMLLGLSMERAKEAISKNCRALVANALKKKQWF 265          
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Match: UPI0010A4E372 (uncharacterized protein LOC114716268 isoform X1 n=3 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4E372)

HSP 1 Score: 161 bits (408), Expect = 2.500e-41
Identity = 104/271 (38.38%), Postives = 145/271 (53.51%), Query Frame = 3
Query:   48 FYDLNVPVLR---TGDA---RARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQIEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPV-----QLTRLTAVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICITCSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVSFTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGATVLRAEARRGQF 827
            F+DLN+P L    T  A   R R K+V +    GY  IA    + G +   HRC I  ++L              SLL+    L    +   +  G P      Q TRLT   DN ++AQ L +GN ++++YDLVA +P N  VFD  C   +VDII +  S +LPF +       A+ RGV FEI Y   I +   RR L+ N ++LV +TRGR I+LSSAA +A + RGP+DV+NL  L+GL+ E+A  A+S T   T+L    R+ Q+
Sbjct:    3 FFDLNIPYLEPSLTDKATLQRQRTKIVVKAMELGYTGIAYNRTIKGVMSDSHRCCIPLLTLS-------------SLLKVAPSLSLSVKLHRDVLGIPSAAPFRQYTRLTVCADNPSQAQALNSGNPILKTYDLVAVRPLNQTVFDQACERMEVDIISMDFSGKLPFRLKHPMVKAAVERGVCFEIIYSGLITDPQIRRQLICNAKLLVDWTRGRNIILSSAAPSANELRGPYDVANLSSLLGLSMEKAKAAIS-TNCRTLLTKSLRKKQY 259          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD2_ECTSI1.080e-8748.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Y2GUE3_9FUNG1.680e-4337.59RNase P subunit p30-domain-containing protein n=1 ... [more]
A0A7C9ES22_OPUST4.180e-4335.02Uncharacterized protein (Fragment) n=2 Tax=Opuntia... [more]
A0A397T3L6_9GLOM1.640e-4236.23RNase P subunit p30-domain-containing protein n=1 ... [more]
A0A176WN56_MARPO1.710e-4235.50Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A803PWF3_CANSA3.180e-4236.40Uncharacterized protein n=5 Tax=Cannabis sativa Ta... [more]
U9UDQ0_RHIID1.020e-4135.71Ribonuclease P complex subunit Pop2 n=8 Tax=Rhizop... [more]
A0A6P8E8C8_PUNGR1.390e-4137.22ribonuclease P protein subunit drpp30 isoform X1 n... [more]
UPI001CC4615C1.760e-4136.96protein GAMETOPHYTE DEFECTIVE 1 n=1 Tax=Telopea sp... [more]
UPI0010A4E3722.500e-4138.38uncharacterized protein LOC114716268 isoform X1 n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:1676765..1680424 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score281.2
Seed ortholog evalue6e-73
Seed eggNOG ortholog2880.D7FWD2
Preferred nameRPP30
KEGG koko:K03539,ko:K07881
KEGG Pathwayko03008,ko03013,ko04152,map03008,map03013,map04152
GOsGO:0000172,GO:0000294,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0000956,GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005655,GO:0005730,GO:0005732,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016074,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019222,GO:0019439,GO:0022613,GO:0030490,GO:0030677,GO:0030681,GO:0031070,GO:0031974,GO:0031981,GO:0032991,GO:0033967,GO:0034470,GO:0034471,GO:0034641,GO:0034655,GO:0034660,GO:0034963,GO:0034965,GO:0042254,GO:0042274,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904
EggNOG free text desc.ribonuclease P activity
EggNOG OGsCOG1603@1,KOG2363@2759
EC3.1.26.5
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03016,ko03029,ko04031,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNase P subunit p30
Ec32 orthologEc-25_000570.1
Exons7
Model size980
Cds size936
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2157.1prot_S-ischiensis_contig11.2157.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 1676809..1680424 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815602.603315-UTR-S-ischiensis_contig11:1676764..16768081622815602.603315-UTR-S-ischiensis_contig11:1676764..1676808Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1676765..1676808 +
1695739797.029877-UTR-S-ischiensis_contig11:1676764..16768081695739797.029877-UTR-S-ischiensis_contig11:1676764..1676808Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1676765..1676808 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815602.6193097-CDS-S-ischiensis_contig11:1676808..16768901622815602.6193097-CDS-S-ischiensis_contig11:1676808..1676890Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1676809..1676890 +
1695739797.0457406-CDS-S-ischiensis_contig11:1676808..16768901695739797.0457406-CDS-S-ischiensis_contig11:1676808..1676890Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1676809..1676890 +
1622815602.6329544-CDS-S-ischiensis_contig11:1677013..16770721622815602.6329544-CDS-S-ischiensis_contig11:1677013..1677072Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1677014..1677072 +
1695739797.0583875-CDS-S-ischiensis_contig11:1677013..16770721695739797.0583875-CDS-S-ischiensis_contig11:1677013..1677072Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1677014..1677072 +
1622815602.6473703-CDS-S-ischiensis_contig11:1677210..16774051622815602.6473703-CDS-S-ischiensis_contig11:1677210..1677405Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1677211..1677405 +
1695739797.0676136-CDS-S-ischiensis_contig11:1677210..16774051695739797.0676136-CDS-S-ischiensis_contig11:1677210..1677405Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1677211..1677405 +
1622815602.6612258-CDS-S-ischiensis_contig11:1677859..16780121622815602.6612258-CDS-S-ischiensis_contig11:1677859..1678012Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1677860..1678012 +
1695739797.076976-CDS-S-ischiensis_contig11:1677859..16780121695739797.076976-CDS-S-ischiensis_contig11:1677859..1678012Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1677860..1678012 +
1622815602.6747956-CDS-S-ischiensis_contig11:1678929..16789901622815602.6747956-CDS-S-ischiensis_contig11:1678929..1678990Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1678930..1678990 +
1695739797.0875068-CDS-S-ischiensis_contig11:1678929..16789901695739797.0875068-CDS-S-ischiensis_contig11:1678929..1678990Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1678930..1678990 +
1622815602.6856585-CDS-S-ischiensis_contig11:1679689..16797711622815602.6856585-CDS-S-ischiensis_contig11:1679689..1679771Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1679690..1679771 +
1695739797.0994153-CDS-S-ischiensis_contig11:1679689..16797711695739797.0994153-CDS-S-ischiensis_contig11:1679689..1679771Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1679690..1679771 +
1622815602.6968286-CDS-S-ischiensis_contig11:1680120..16804241622815602.6968286-CDS-S-ischiensis_contig11:1680120..1680424Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1680121..1680424 +
1695739797.1097453-CDS-S-ischiensis_contig11:1680120..16804241695739797.1097453-CDS-S-ischiensis_contig11:1680120..1680424Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1680121..1680424 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2157.1

>prot_S-ischiensis_contig11.2157.1 ID=prot_S-ischiensis_contig11.2157.1|Name=mRNA_S-ischiensis_contig11.2157.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=312bp
MFYDLNVPVLRTGDARARVKLVEQLFAYGYDCIALTTLVYGQLQRQHRCQ
IEPVSLDAARVTKRGARCDPSLLRARGMLPARGQASGEGPGFPVQLTRLT
AVVDNMNEAQMLTAGNDVVQSYDLVAAQPTNGKVFDYLCREADVDIICIT
CSQRLPFTVSKKQTDLALARGVVFEICYKRAIQNASSRRHLLANTQVLVS
FTRGRGILLSSAAETALQARGPHDVSNLGQLMGLTQEQALRAVSETAGAT
VLRAEARRGQFTGLGVHPGGKGKAKAGGLLESLRLPSPETYMPVARPVGG
AGEEGEEGGGGG
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mRNA from alignment at S-ischiensis_contig11:1676765..1680424+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2157.1 ID=mRNA_S-ischiensis_contig11.2157.1|Name=mRNA_S-ischiensis_contig11.2157.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3660bp|location=Sequence derived from alignment at S-ischiensis_contig11:1676765..1680424+ (Schizocladia ischiensis KU_0333)
GCTGCAGCAGCTGCGGCTGAAGTTGTGTGTTGGTGAAAGTTGTCATGTTT TACGACCTAAACGTGCCTGTGCTCCGCACTGGTGACGCTCGTGCAAGGGT CAAGCTGGTTGAGCAGCTCTTCGCATGTGAGATGATGTTCGCTTTGGCTT CGCGGGACTCCACAGCGAGCACACAGGACTCGCGCCCTGAACCCGTTGTG CACCTGTTGCGCCTGCCCGCCGCCGCCGCCGCCGCCCACCTCCGCGCAGA TGGGTACGACTGCATTGCGTTGACTACTCTCGTCTACGGCCAGCTTCAGC GGCAGCACGTGAGTTGCGAGGGGCGCGAAATGAAACTGGGCACTGAACCC GCAGCAGCTGCACCCGCGAGTTGCGGACCGAGGCCAGGCGAACCTCCAAA CCATAACCACCTTAGTAACGATCTCTGCACCCCCTCCCCCTGCCAGCGCT GCCAGATCGAGCCGGTGTCGTTGGACGCTGCCCGGGTAACAAAGCGCGGT GCACGATGCGACCCATCCTTGCTGAGGGCGCGGGGCATGTTGCCCGCTCG GGGGCAGGCCTCCGGCGAGGGGCCAGGCTTCCCTGTGCAGCTGACGAGAT TGACAGCCGTGGTCGACAACATGAATGAGGCCCAGATGTTGGTGAGGAGG GTGTCGCGTGGTTCGTCATGCACTCGGAAGGGGGTTCCCTTGGTATCTTG CCGCGGTGCTTCTGCTGCGTTTCGCGAGCCTTTGTATGTACTGCAATAAA GTAAGTAGTACTAGAGGAGAGTATGTATGCCGTCCAAGTAGGAGAATCCC ATGCCTATCCTCTCGCCACTGGGACCCCAGACAAAGGCGCGGGCGCGGCA CAGGGGGGGGACACGGCTTCGAACGTGAGCACATGATTGGAGGAGGTGGA GGAGAAGGAGCAGGAGCAGGAGCAGCAGCAACAGCAGCAGGAGGAGGTGG AGGAGATGGAGGCCAGCCACGGCCGCACCGGCGTCATTAATGAGGCCGCC TTGGCTGGCGTGACGAGCAGCGAGCGCTGGTTTCCCGGCCGACCCCTCTA CTCTTGCTCCTCATGCCTCCTTACGATCCCGCACGCGCGCGACAGACCGC CGGCAACGACGTGGTGCAGTCGTACGACCTGGTGGCTGCCCAGCCCACCA ACGGCAAGGTGTTTGACTACCTCTGCCGGGAGGCCGACGTGGACATCATC TGCATCACCTGCTCGCAGCGCCTGCCCTTCACCGTCAGCAAGAAGCAGGC GAGCGGGGGGGGGTGAACCCTCACGTTGCTACAGGTGTACGAGTACAAAA GTGTGTACGCACTTGGGGAGAATCTACAGTAGCATTCGTAGTTCCGAGTA CTACGCAGTGGTCAGTGGTCTCGGGGCTGCGGCAAGCACAATGCGAGTAC ATCTACTTGTACTGTGTATGTCCTGTACTTCGAAGCAGTGGTTTCAACCG TTGCCACTGCTTGCAAAGTACTCCCGGAAGTACTCATTACCTAGATACTA CGTAGTACGATGTAGCTCTGTGCTCTCGCACTGCACTGCAATAGCAGTTT AACACTTGTGTTTGCTAGTAGAAGTATGTCCTAAAGTAGAGGTGCAACTG GTAGGTGGTGTAGTACACTCAGGCAGGGCCCCCTGGCGCCCCGGCGGGGC CCGCCTGAACTACTGCAGTAAACGGCACTGTAGTGCCAGGGGTGTACTCT ACAAGAACTTCGTACTTCCAAGCGCTTGGAGGTATGCGTTAGATGCCGCC CTGGTGAGCGAAGCGCGGTTTTATGGATGGAGCGCTCGATGAAGTAGGCG GGCCTCTTTGTCTTTGAAACACACCGCGGGCGGCGCACAACATGGCGAGG TCTCCCACTCCTCACGTGTACAATACCTTGACGTACTTCCGAGGCAGTAC TCGGAAGCATCTTCTATATGCCCAGCTGTAGCAAGCAGCCTTTGGTGCTG CGAGGCACTCTGCTGGGATAGAGAGAGCCCTGCGTTTGGTATAAACACTC TCTCGCATACGCCCTCTGACAGAAATATTCTCAACACCTGCTCCGCCACT GCTTGTCCCCCCGCCACCGATGCGTTTTGTCCGTCAATGGCACGGCGCTT GTGCCGCTGTCCCCCCTGGCCCGCCGCCCCCCGGCTTGTGCGCCTGTCCT GTCCCGGGCAAGCAGACAGACTTGGCGCTGGCACGAGGGGTTGTGTTTGA GATCTGCTACAAGCGCGCCATCCAGAGTGAGTGCTGGGAGCACAGGCTCG AGCTTTGTACTGAGTAAGCTTGCTTAGCTGCACACCGGCAATTCGCTAGG CACATCTCTTTGTCAAGTTTACGTTCGAGCTGGGCAAGGCCCCCCCCCCC GCCTTGGGTTGACTGCTTGGGTGCGAGTGACATCCGGTAGGCCTGAAACG TTCAAGCTCAAATGCTTCTCTTGACTGGGAAGCTTTGCGGGGTTGGTTGT GCATGAATGCGAGTGACATCCGGTCAGCCCGCTACTCTCCCGGATTTCAC GCAGCTCGGCGAGGAGATAACAACCAGTAGTCGTTTTAACAAGCATTATC CATTCCCGGTTTGCAGGCGGGCCACCAGCGTGGCTCACGACCAACTGGAA ACTAAAAGAAGATGGATGGAACAAAAGAGAATCACTTCAAAACATGTGCT TGTACTCGTAACATGTACTCGCGCCGTGCTTGCTGCAGTCCCGAGACCAT TGACTGCACGCCTCGTAGGAGGCGGAGCAGGCTCCCTCCCGCCCATGGCA GAGCCAGTCTACTATGTACATCGTACTGTAGTGCCTCGAAGTACTAGCCT ACGACCAACTCACCCACCCCCGCCCCCCACATCCCCCGCACACCGCCGCC ACCACCGGTGCGGCCACCGCCGCCGCTGGGGAACACGGCGGTTTTATCTT CCTTCTCTTCTTCGCCTGGGAGCAGACGCGTCCTCAAGGCGGCACCTCCT TGCTAACACGCAGGTGCTCGTGTCCTTCACGAGAGGGAGGGGCATCCTCC TCTCCAGGTGAGGGCGGCCAGGGTTGGAACCCAAGGAGAAGGAAAGGCAC TACTACTGTACTGTACATTTATTTTTACTTGCACCTCGCCTGGCTTGCCA GAGTGGTAGAGTACAGTCGTATATCTAACGCACGATACTGTATATATATA TATGTACTCACGTGGTGCTTGCCGTAGTCCCGAGACCATTTACCACGCAC CTCGGTCGAGACGGAACAACCAATACCAACCAAAAGGCACCACCGCAAAA TGACCACCACCACCGCCGCCAACAACAACAACAACAAGGAACCAACAACG TACTTGCGTCTCAACCCACCCACCCCCCCACCCCCCGACCCACCCACCCA CACTAGTGCGGCAGAGACCGCACTGCAGGCCAGGGGGCCGCACGACGTCT CCAACCTCGGGCAGCTCATGGGGCTCACGCAGGAGCAGGCCCTTCGGGCC GTGAGCGAAACCGCCGGGGCCACCGTGCTCCGGGCCGAGGCCCGCCGCGG GCAGTTCACGGGCCTGGGAGTGCACCCGGGGGGAAAAGGAAAGGCCAAGG CTGGGGGGCTGCTGGAGAGCCTCAGGTTGCCCTCTCCAGAGACGTACATG CCGGTGGCGCGGCCGGTGGGGGGGGCGGGGGAGGAGGGGGAGGAGGGGGG GGGGGGGGGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:1676765..1680424+

>mRNA_S-ischiensis_contig11.2157.1 ID=mRNA_S-ischiensis_contig11.2157.1|Name=mRNA_S-ischiensis_contig11.2157.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1872bp|location=Sequence derived from alignment at S-ischiensis_contig11:1676765..1680424+ (Schizocladia ischiensis KU_0333)
ATGTTTTACGACCTAAACGTGCCTGTGCTCCGCACTGGTGACGCTCGTGC
AAGGGTCAAGCTGGTTGAGCAGCTCTTCGCATATGTTTTACGACCTAAAC
GTGCCTGTGCTCCGCACTGGTGACGCTCGTGCAAGGGTCAAGCTGGTTGA
GCAGCTCTTCGCATATGGGTACGACTGCATTGCGTTGACTACTCTCGTCT
ACGGCCAGCTTCAGCGGCAGCACATGGGTACGACTGCATTGCGTTGACTA
CTCTCGTCTACGGCCAGCTTCAGCGGCAGCACCGCTGCCAGATCGAGCCG
GTGTCGTTGGACGCTGCCCGGGTAACAAAGCGCGGTGCACGATGCGACCC
ATCCTTGCTGAGGGCGCGGGGCATGTTGCCCGCTCGGGGGCAGGCCTCCG
GCGAGGGGCCAGGCTTCCCTGTGCAGCTGACGAGATTGACAGCCGTGGTC
GACAACATGAATGAGGCCCAGATGTTGCGCTGCCAGATCGAGCCGGTGTC
GTTGGACGCTGCCCGGGTAACAAAGCGCGGTGCACGATGCGACCCATCCT
TGCTGAGGGCGCGGGGCATGTTGCCCGCTCGGGGGCAGGCCTCCGGCGAG
GGGCCAGGCTTCCCTGTGCAGCTGACGAGATTGACAGCCGTGGTCGACAA
CATGAATGAGGCCCAGATGTTGACCGCCGGCAACGACGTGGTGCAGTCGT
ACGACCTGGTGGCTGCCCAGCCCACCAACGGCAAGGTGTTTGACTACCTC
TGCCGGGAGGCCGACGTGGACATCATCTGCATCACCTGCTCGCAGCGCCT
GCCCTTCACCGTCAGCAAGAAGCAGACCGCCGGCAACGACGTGGTGCAGT
CGTACGACCTGGTGGCTGCCCAGCCCACCAACGGCAAGGTGTTTGACTAC
CTCTGCCGGGAGGCCGACGTGGACATCATCTGCATCACCTGCTCGCAGCG
CCTGCCCTTCACCGTCAGCAAGAAGCAGACAGACTTGGCGCTGGCACGAG
GGGTTGTGTTTGAGATCTGCTACAAGCGCGCCATCCAGAACAGACTTGGC
GCTGGCACGAGGGGTTGTGTTTGAGATCTGCTACAAGCGCGCCATCCAGA
ACGCGTCCTCAAGGCGGCACCTCCTTGCTAACACGCAGGTGCTCGTGTCC
TTCACGAGAGGGAGGGGCATCCTCCTCTCCAGACGCGTCCTCAAGGCGGC
ACCTCCTTGCTAACACGCAGGTGCTCGTGTCCTTCACGAGAGGGAGGGGC
ATCCTCCTCTCCAGTGCGGCAGAGACCGCACTGCAGGCCAGGGGGCCGCA
CGACGTCTCCAACCTCGGGCAGCTCATGGGGCTCACGCAGGAGCAGGCCC
TTCGGGCCGTGAGCGAAACCGCCGGGGCCACCGTGCTCCGGGCCGAGGCC
CGCCGCGGGCAGTTCACGGGCCTGGGAGTGCACCCGGGGGGAAAAGGAAA
GGCCAAGGCTGGGGGGCTGCTGGAGAGCCTCAGGTTGCCCTCTCCAGAGA
CGTACATGCCGGTGGCGCGGCCGGTGGGGGGGGCGGGGGAGGAGGGGGAG
GAGGGGGGGGGGGGGGGGTGCGGCAGAGACCGCACTGCAGGCCAGGGGGC
CGCACGACGTCTCCAACCTCGGGCAGCTCATGGGGCTCACGCAGGAGCAG
GCCCTTCGGGCCGTGAGCGAAACCGCCGGGGCCACCGTGCTCCGGGCCGA
GGCCCGCCGCGGGCAGTTCACGGGCCTGGGAGTGCACCCGGGGGGAAAAG
GAAAGGCCAAGGCTGGGGGGCTGCTGGAGAGCCTCAGGTTGCCCTCTCCA
GAGACGTACATGCCGGTGGCGCGGCCGGTGGGGGGGGCGGGGGAGGAGGG
GGAGGAGGGGGGGGGGGGGGGG
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