mRNA_S-ischiensis_contig11.2154.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2154.1
Unique NamemRNA_S-ischiensis_contig11.2154.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig11.2154.1 vs. uniprot
Match: D7FSD5_ECTSI (Mitochondrial import receptor, Tom70 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSD5_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 4.740e-49
Identity = 125/348 (35.92%), Postives = 185/348 (53.16%), Query Frame = 2
Query:    5 RVVKRRYDEGMDDIVAAYKLLEDLDNGKGAATPAAXXXXXXTGPGANEEAAGAPVSPVEIKDEVRAEVLSWYGTVLHLNSDLDGAMASYEKC---VKVCGEEVSPDVLIKLAGVHLDREDVDRAEMLMGTAIDADRGYGTSYMFKAQIAAVKGDQGEAISCLERCMALAPKHAAAYNRMVAMRVQAGQVAEANEVLEQGLKHNPKSCQLLVSKGELIFSTAMMMQSAEGMIMSLEPFDKAMVADPLNPIPCVQKAMIVMQVQGDTAQAKDLLHKALRADPNFPTCYLQLANVQINEATTLEEGEAAVRLYDKAVELTRERSELLETMAVKVAAVAKLQGARSLGLTSL 1039
            R+VKR YD   +DI  A +LL  L                     A+   AGA     E+   V+A V  W GT L L+  LD AM +Y +C   ++  GEE   DVLIK+A V +D+ED+D A+ L   A +A   YG+S+  +A++ + K    +  S L + + L  + A A+ ++  + VQAG + +A   +E+GL+  P S  LL  K EL +S AM    A      LE FD A+ A+P +P+  + KA  ++Q+  D   A +LL K +  DP      +QLAN++I  A  + E EAA  L DKAV L   + EL+ET++V+VA   +++GA  LG T+L
Sbjct:  414 RMVKRNYDGAREDIFEAAELLSTLTE-------------------ADPSEAGAD----EVPPHVKASVWEWQGTFLQLSGKLDEAMEAYRRCGEEMEAEGEEYPADVLIKMAWVCMDKEDMDAAKDLFARAGEAHPEYGSSFAHRARLDSEKDGAEQVRSFLRKAIELNSEDAFAWEQLCRIHVQAGDIPKATSTIEEGLEFVPNSDALLTLKAELKYSMAMKAGDASSCAAILEVFDAAIRANPSSPVLYLNKASCLLQMMSDVGGAMELLEKGVSVDPTSVNALVQLANLKIMVAREMAEAEAATALLDKAVALCTTKEELMETLSVRVATEGRIKGALLLGRTTL 738          
BLAST of mRNA_S-ischiensis_contig11.2154.1 vs. uniprot
Match: A0A7S3K1R0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1R0_9STRA)

HSP 1 Score: 115 bits (288), Expect = 7.240e-25
Identity = 79/296 (26.69%), Postives = 146/296 (49.32%), Query Frame = 2
Query:  170 SPVEIKDEVRAEVLSWYGTVLHLNSDLDGAMASYEKCVKVCGEEV-SPDVLIKLAGVHLDREDVDRAEMLMGTAIDADRGYGTSYMFKAQIAAVKGDQGEAISCLERCMALAPKHAAAYNRMVAMRVQAGQVAEANEVLEQGLKHNPKSCQLLVSKGELIFSTAMMMQSAEGMI-MSLEPFDKAMVADPLNPIPCVQKAMIVMQVQG---DTAQAKDLLHKALRADPNFPTCYLQLANVQINEATTLEEGEAAVRLYDKAVELTRERSELLETMAVKVAAVAKLQGARSLGLTSLQ 1042
            S   +  +  AE+  + G   HL  +L  +  +Y + +++  + +   +  +KLAGV +D  + D+AE  +  A+  D      YM +AQ+  ++ D   A + LE+C+  AP H  A  R+  + +        N+V    ++ +  +C+ L      ++     +  A   I  +++ FDKA+  D  NP+P   K M ++Q+     D  + KDL   AL+ DP      ++L+ +++  A T ++    V + D+A    R+  ELLE   V+  A+A+L+ A+++GLTS Q
Sbjct:  236 SSSHVSSKCLAEIWRYVGLFRHLTHELSESDEAYRRSLELETDSLLRAETRVKLAGVLVDSGEADKAEAELVQALKEDPESSDVYMHRAQLHVIRRDLQSAQADLEKCIKAAPDHVLARLRLATVLIH-------NQVDSMEIEEHMLACEKLAPDMSEVYQVKGEIALANNEIETAIQHFDKAIALDSTNPVPLYNKGMALIQLPDGGRDPQRTKDLFEAALKVDPTCMVALMRLSELKLQLAATFDQARDVVDMLDRATVHCRDNDELLELSTVRAMAIAQLEAAQNVGLTSFQ 524          
BLAST of mRNA_S-ischiensis_contig11.2154.1 vs. uniprot
Match: A0A4D9D7M3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7M3_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.010e-24
Identity = 84/303 (27.72%), Postives = 149/303 (49.17%), Query Frame = 2
Query:  140 ANEEAAGAPVSPVEIKDEVRAEVLSWYGTVLHLNSDLDGAMASYEKCVKVCGEEVSPDVLIKLAGVHLDREDVDRAEMLMGTAIDADRGYGTSYMFKAQ--IAAVKGDQG--EAISCLERCMALAPKHAAAYNRMVAMRVQAGQVAEANEVLEQGLKHNPKSCQLLVSKGELIFSTAMMMQSAEGMIMSLEPFDKAMVADPLNPIPCVQKAMIVMQVQGDTAQAKDLLHKALRADPNFPTCYLQLANVQINEATTLEEGEAAVRLYDKAVELTRERSELLETMAVKVAAVAKLQGARSLGLTS 1036
            A EE A  P       +E +A + SW GT LHL  DLD A    E    +  +  SP++LIK   +HLDR +++ A++L+  A +        Y+++ Q  ++    ++G  EA   L +C+ L   +  A  R++ +++Q  + AEA +++E+  +  P++        +++                          DP NP+P + KA++  Q + D   A++ L   +  DP +   Y  LAN+     +T+E+ + A  + DK +++ R + +L E   +KV A+AKL GA+ LGLT+
Sbjct:  300 AREEGASLPT------EEEQANLFSWAGTFLHLKHDLDEARKVLEHSSNLNPD--SPELLIKRGCLHLDRSELEEAKVLLEKARETSPTSAFVYLWRCQFWMSGKMTEEGLQEAERELNKCLELDEGNVVALIRLMNIKMQRNETAEAEKLIEKAKRAAPRNA-------DVVXXXXXXXXXXXXXXXXXXXXXXXXXXDPSNPMPHINKALVAWQGE-DAVTARETLQHVIEMDPQYQPAYSFLANLLFKGVSTVEDSKPAFEIIDKGMQICRSKDDLEELAQIKVLAMAKLDGAKRLGLTA 586          
BLAST of mRNA_S-ischiensis_contig11.2154.1 vs. uniprot
Match: W7TQJ6_9STRA (Mitochondrial import receptor subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQJ6_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 4.060e-13
Identity = 38/110 (34.55%), Postives = 65/110 (59.09%), Query Frame = 2
Query:  707 DKAMVADPLNPIPCVQKAMIVMQVQGDTAQAKDLLHKALRADPNFPTCYLQLANVQINEATTLEEGEAAVRLYDKAVELTRERSELLETMAVKVAAVAKLQGARSLGLTS 1036
            +K++  DP NP+P + KA++  Q + D   A++ L   +  DP +   Y  LAN+     +T+E+ + A  + DK +++ R + +L E   +KV A+AKL GA+ LGLT+
Sbjct:   13 EKSIRLDPSNPMPHINKALVAWQGE-DAVTARETLQHVIEMDPQYQPAYSFLANLLFKGVSTVEDSKPAFEIIDKGMQICRTKDDLEELAQIKVLAMAKLDGAKRLGLTA 121          
BLAST of mRNA_S-ischiensis_contig11.2154.1 vs. uniprot
Match: A0A433PHS9_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PHS9_9FUNG)

HSP 1 Score: 73.2 bits (178), Expect = 1.530e-10
Identity = 55/203 (27.09%), Postives = 97/203 (47.78%), Query Frame = 2
Query:  386 AIDADRGYGTSYMFKA-----QIAAVKGDQGEAISCLERCMALAPKHAAAYNRMVAMRVQAGQVAEANEVLEQGLKHNPKSCQLLVSKGELIFSTAMMMQSAEGMIMSLEPFDKAMVADPLNPIPCVQKAMIVMQVQGDTAQAKDLLHKALRADPNFPTCYLQLANVQINEATTLEEGEAAVRLYDKAVELTRERSELLETMA 979
            AI+AD  Y  +Y+ +A     Q+  + GD   A       + L P    A+ ++   + + G V+ A +  +  L+  PKS  +    GEL+     + ++ E        F KA+  D  NP+P + KA++V+Q Q +   A++L  +AL  DPN       LA + + +  T +    A++ Y+K VEL +  +EL   ++
Sbjct:  332 AIEADATYLQTYIKRASVYMEQVNFINGDFENAAKDYAESIRLDPAFVYAHIQLGVSQYKMGSVSAAMQTFKGALRQFPKSADVNNYYGELLLDQQKLDEATE-------KFGKAIELDGQNPLPYINKALLVLQFQHNLTGAEELCRQALEVDPNCDVAIATLAQLLLQQGRTAD----AIKWYEKTVELAKTEAELTNAVS 523          
BLAST of mRNA_S-ischiensis_contig11.2154.1 vs. uniprot
Match: A0A433CWR8_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433CWR8_9FUNG)

HSP 1 Score: 72.4 bits (176), Expect = 2.690e-10
Identity = 52/184 (28.26%), Postives = 86/184 (46.74%), Query Frame = 2
Query:  446 VKGDQGEAISCLERCMALAPKHAAAYNRMVAMRVQAGQVAEANEVLEQGLKHNPKSCQLLVSKGELIFSTAMMMQSAEGMIMSLEPFDKAMVADPLNPIPCVQKAMIVMQVQGDTAQAKDLLHKALRADPNFPTCYLQLANVQINEATTLEEGEAAVRLYDKAVELTRERSELLETMAVKVAAV 997
            + GD   A       + L P    A+ ++   + + G +  A    +  LK  P+S  +    GEL+       Q  E    ++E F+KAM  DP NP+P + KA++V Q Q +   A++L  +AL+AD N       LA + + +  T +    A+  Y+K VEL R  +EL   ++   A +
Sbjct:  290 ITGDFDNAAKDYAESIKLDPSFVYAHIQLGVAQYKMGSITSAMSTFKGALKQFPESADVNNYYGELLLDQ----QRLED---AMEKFEKAMELDPRNPLPYINKALLVFQFQQNMVLAEELCREALKADANCDVAIATLAQLMLQQGRTAD----AIEWYEKTVELARTEAELSNAVSYLEALI 462          
BLAST of mRNA_S-ischiensis_contig11.2154.1 vs. uniprot
Match: A0A834Y567_9HYME (Uncharacterized protein n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A834Y567_9HYME)

HSP 1 Score: 70.5 bits (171), Expect = 1.240e-9
Identity = 59/261 (22.61%), Postives = 118/261 (45.21%), Query Frame = 2
Query:  245 DLDGAMASYEKCVKVCGEEVSPDVLIKLAGVHLDREDVDRAEMLMGTAIDADRGYGTSYMFKAQIAAVKGDQGEAISCLERCMALAPKHAAAYNRMVAMRVQAGQVAEANEVLEQGLKHNPKSCQLLVSKGELIFSTAMMMQSAEGMIMSLEPFDKAMVADPLNPIPCVQKAMIVMQVQGDTAQAKDLLHKALRADPNFPTCYLQLANVQINEATTLEEGEAAVRLYDKAVELTRERSELLETMAVKVAAVAKLQGARSLG 1027
            DL+  + +Y+    + G++V  + L+K A + + +E  D       TA+  +      Y  + QI  +     EA    ++   L P +  AY +   +  + G +  ++E+L   +    K  +L  +  E     A ++  ++    + E F+KA   DP N    V + ++ +Q Q +  +  + ++KA+  D      Y  L  V++     L     A++++DKA+ L+R   EL    +++ AA A+L+ +  LG
Sbjct:  311 DLEKVIDNYQ----ISGDDVRVNALVKRALMRMQQEKRDECLKDFDTAVKINPNCSDIYHHRGQILLLFEKINEAKVDSDKAFELDPNNGVAYAQKCYVNYRFGAINRSSEMLANVIDDFEKGFELYPNCCECFSLYAQLLCDSQAFGKADEYFEKASKVDPTNATLYVHRGLLQLQWQANIEKGLEFINKAIEIDDKCEFAYETLGTVEVQRGNLLN----AIKIFDKAIPLSRTNIELTHIFSLRDAARAQLKTSDKLG 563          
BLAST of mRNA_S-ischiensis_contig11.2154.1 vs. uniprot
Match: A0A8H7C0G2_9FUNG (TOM (Translocase of outer membrane) complex component n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7C0G2_9FUNG)

HSP 1 Score: 70.5 bits (171), Expect = 1.270e-9
Identity = 72/293 (24.57%), Postives = 126/293 (43.00%), Query Frame = 2
Query:  197 RAEVLSWYGTVLHLNSDLDGAMASYEKCVKVCGEEVSPDVLIKLAGVHLDREDVDRAEMLMGTAI-----DAD----RGYGT--------SYMFKAQIAAVKGDQGEAISCLERCMALAPKHAAAYNRMVAMRVQAGQVAEANEVLEQGLKHNPKSCQLLVSKGELIFSTAMMMQSAEGMIMSLEPFDKAMVADPLNPIPCVQKAMIVMQVQGDTAQAKDLLHKALRADPNFPTCYLQLANVQINEATTLEEG--EAAVRLYDKAVELTRERSELLETMAVKVAAVAKLQGAR 1018
            +A  L+ YGT + L  +   A+  + K ++   + V     IK + + +++ DV         AI     D D    RG G         S + K+ +  + G+   A       + L      A+ ++  ++ + G ++ +       LK  P S  +    GEL+     +  +       ++ F KA+  DP NP+P + KAM++ QV GD  +A  L   AL ADP        LA +       LE+G  E A++ Y+ A+EL R  +EL   ++   A   +++ A+
Sbjct:  304 QALALNMYGTFVFLKGNTKDALEYFNKAIEADPKFVQS--YIKRSSIFMEQGDVPSTFKQFEEAIAINPSDPDIYYHRGQGVLITMKDAKSVLTKSLVNYISGNYDAAAKDYSESIKLDDSFVYAHIQLGVVQYKLGSISSSMTTFNNTLKKFPNSADVHNYYGELLADQQKLPDA-------IDMFSKAVAMDPKNPLPYINKAMLMYQVMGDINEATALCKTALEADPACDAAVASLAQI------LLEQGKPEEALKYYELAIELARTEAELEHAISYVEATKTQIKFAQ 581          
BLAST of mRNA_S-ischiensis_contig11.2154.1 vs. uniprot
Match: A0A8H7PNH4_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PNH4_MORIS)

HSP 1 Score: 67.4 bits (163), Expect = 1.270e-8
Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 2
Query:  692 SLEPFDKAMVADPLNPIPCVQKAMIVMQVQGDTAQAKDLLHKALRADPNFPTCYLQLANVQINEATTLEEGEAAVRLYDKAVELTRERSELLETMAVKVAAVAKLQGAR 1018
            +LE F KA+  D  NP+P + KAM++ QV+GD  QA DL   AL ADP+       LA + + +    E    AVR Y+ A++L R  +EL   ++   A   +++ A+
Sbjct:  472 ALEMFSKAIEIDAKNPLPYINKAMLMYQVKGDIQQAMDLCKGALEADPSCDAAVASLAQILLEQGQPAE----AVRYYEMAIDLARTEAELEHAISYVEATKTQIRFAQ 576          
BLAST of mRNA_S-ischiensis_contig11.2154.1 vs. uniprot
Match: A0A8H5B9P5_9AGAR (Uncharacterized protein n=1 Tax=Psilocybe cf. subviscida TaxID=2480587 RepID=A0A8H5B9P5_9AGAR)

HSP 1 Score: 67.4 bits (163), Expect = 1.300e-8
Identity = 63/278 (22.66%), Postives = 117/278 (42.09%), Query Frame = 2
Query:  188 DEVRAEVLSWYGTVLHLNSDLDGAMASYEKCVKVCGEEVSPDVLIKLAGVHLDREDVDRAEMLMGTAIDADRGYGTSYMFKAQIAAVKGDQGEAISCLERCMALAPKHAAAYNRMVAMRVQAGQVAEANEVLEQGLKHNPKSCQLLVSKGELIFSTAMMMQSAEGMIMSLEPFDKAMVAD----PLNPIPCVQKAMIVMQVQGDTAQAKDLLHKALRADPNFPTCYLQLANVQINEATTLEEGEAAVRLYDKAVELTRERSELLETMAVKVAAVAKLQ 1009
            D  RAE L+  GT   L  ++ GA    E+ VK+         L+K+A VH+++ D  +A      AI  D      Y  + Q+  +  +  +A         L      ++ ++   + + G +A++     + L+  P   +     GEL+        +       +E FDKA+  +    P N +  V K + + Q + D   A+   ++ALR D         LA + + ++   E    AV+L+++  EL R   EL+  +  + A  A+++
Sbjct:  332 DAGRAEALNLRGTFKFLTGEIPGAKEDLEESVKLV--PTFTQSLVKIASVHMEQGDPQKAFECFDKAIACDEKDPDIYYHRGQVLFIMNEFADAAQNYVTSSELDENFVFSHIQLAVAQYKMGDLAKSMATFRRTLRQFPNRSEPSNYYGELLLDQGRFEDA-------VEKFDKAIELEKTKSPPNVLSLVNKGLALYQWKQDIGAAERCCNEALRIDAECEAAVATLAQLNLQQSKISE----AVKLFERQAELARSEPELMNALTYQYATSAQVE 596          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FSD5_ECTSI4.740e-4935.92Mitochondrial import receptor, Tom70 homolog n=2 T... [more]
A0A7S3K1R0_9STRA7.240e-2526.69Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A4D9D7M3_9STRA1.010e-2427.72Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
W7TQJ6_9STRA4.060e-1334.55Mitochondrial import receptor subunit n=1 Tax=Nann... [more]
A0A433PHS9_9FUNG1.530e-1027.09Uncharacterized protein n=1 Tax=Endogone sp. FLAS-... [more]
A0A433CWR8_9FUNG2.690e-1028.26Uncharacterized protein n=1 Tax=Jimgerdemannia fla... [more]
A0A834Y567_9HYME1.240e-922.61Uncharacterized protein n=1 Tax=Aphidius gifuensis... [more]
A0A8H7C0G2_9FUNG1.270e-924.57TOM (Translocase of outer membrane) complex compon... [more]
A0A8H7PNH4_MORIS1.270e-835.78Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A8H5B9P5_9AGAR1.300e-822.66Uncharacterized protein n=1 Tax=Psilocybe cf. subv... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:1649122..1660429 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score181.4
Seed ortholog evalue6.9e-43
Seed eggNOG ortholog2880.D7FSD5
Preferred nameTOMM70A
KEGG koko:K00738,ko:K17768
KEGG TC3.A.8.1
KEGG ReactionR05987
KEGG Pathwayko00510,ko00513,ko01100,map00510,map00513,map01100
KEGG ModuleM00075
GOsGO:0001101,GO:0001558,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005742,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0010611,GO:0010614,GO:0010721,GO:0014070,GO:0014741,GO:0014743,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016202,GO:0017038,GO:0019867,GO:0022804,GO:0022857,GO:0022884,GO:0030150,GO:0030308,GO:0030943,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031306,GO:0031307,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032592,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0040008,GO:0042221,GO:0042277,GO:0042493,GO:0042886,GO:0042887,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043502,GO:0044057,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0045595,GO:0045596,GO:0045843,GO:0045926,GO:0046620,GO:0046621,GO:0046907,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048634,GO:0048635,GO:0048638,GO:0048640,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051093,GO:0051128,GO:0051147,GO:0051148,GO:0051153,GO:0051154,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051241,GO:0051641,GO:0051649,GO:0055021,GO:0055022,GO:0055024,GO:0055026,GO:0055085,GO:0060284,GO:0060420,GO:0061024,GO:0061050,GO:0061052,GO:0061117,GO:0065002,GO:0065007,GO:0070201,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0072657,GO:0090087,GO:0090150,GO:0090151,GO:0090257,GO:0097066,GO:0097068,GO:0098573,GO:0098588,GO:0098796,GO:0098798,GO:0098799,GO:0098805,GO:1901698,GO:1901700,GO:1901861,GO:1901862,GO:1904386,GO:1904589,GO:1904591,GO:1904680,GO:1904951,GO:1905207,GO:1905208,GO:1990542,GO:2000026,GO:2000725,GO:2000726
EggNOG free text desc.protein transmembrane transport
EggNOG OGsKOG0547@1,KOG0547@2759
EC2.4.1.145
COG Functional cat.S
CAZyGT54
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSimilar to mitochondrial import receptor Tom70
Ec32 orthologEc-25_001030.1
Exons9
Model size1054
Cds size1011
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815602.3406794-UTR-S-ischiensis_contig11:1649121..16491551622815602.3406794-UTR-S-ischiensis_contig11:1649121..1649155Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1649122..1649155 +
1695739796.8110688-UTR-S-ischiensis_contig11:1649121..16491551695739796.8110688-UTR-S-ischiensis_contig11:1649121..1649155Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1649122..1649155 +
1622815602.452651-UTR-S-ischiensis_contig11:1660420..16604291622815602.452651-UTR-S-ischiensis_contig11:1660420..1660429Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1660421..1660429 +
1695739796.9227624-UTR-S-ischiensis_contig11:1660420..16604291695739796.9227624-UTR-S-ischiensis_contig11:1660420..1660429Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1660421..1660429 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815602.3529508-CDS-S-ischiensis_contig11:1649155..16491611622815602.3529508-CDS-S-ischiensis_contig11:1649155..1649161Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1649156..1649161 +
1695739796.8242044-CDS-S-ischiensis_contig11:1649155..16491611695739796.8242044-CDS-S-ischiensis_contig11:1649155..1649161Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1649156..1649161 +
1622815602.3623052-CDS-S-ischiensis_contig11:1650442..16505951622815602.3623052-CDS-S-ischiensis_contig11:1650442..1650595Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1650443..1650595 +
1695739796.8335671-CDS-S-ischiensis_contig11:1650442..16505951695739796.8335671-CDS-S-ischiensis_contig11:1650442..1650595Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1650443..1650595 +
1622815602.3716486-CDS-S-ischiensis_contig11:1652149..16523201622815602.3716486-CDS-S-ischiensis_contig11:1652149..1652320Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1652150..1652320 +
1695739796.8423734-CDS-S-ischiensis_contig11:1652149..16523201695739796.8423734-CDS-S-ischiensis_contig11:1652149..1652320Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1652150..1652320 +
1622815602.3827343-CDS-S-ischiensis_contig11:1653854..16539131622815602.3827343-CDS-S-ischiensis_contig11:1653854..1653913Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1653855..1653913 +
1695739796.8519397-CDS-S-ischiensis_contig11:1653854..16539131695739796.8519397-CDS-S-ischiensis_contig11:1653854..1653913Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1653855..1653913 +
1622815602.3943822-CDS-S-ischiensis_contig11:1655160..16551731622815602.3943822-CDS-S-ischiensis_contig11:1655160..1655173Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1655161..1655173 +
1695739796.8623135-CDS-S-ischiensis_contig11:1655160..16551731695739796.8623135-CDS-S-ischiensis_contig11:1655160..1655173Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1655161..1655173 +
1622815602.413317-CDS-S-ischiensis_contig11:1655936..16561341622815602.413317-CDS-S-ischiensis_contig11:1655936..1656134Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1655937..1656134 +
1695739796.8726313-CDS-S-ischiensis_contig11:1655936..16561341695739796.8726313-CDS-S-ischiensis_contig11:1655936..1656134Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1655937..1656134 +
1622815602.4242184-CDS-S-ischiensis_contig11:1657340..16574811622815602.4242184-CDS-S-ischiensis_contig11:1657340..1657481Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1657341..1657481 +
1695739796.884907-CDS-S-ischiensis_contig11:1657340..16574811695739796.884907-CDS-S-ischiensis_contig11:1657340..1657481Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1657341..1657481 +
1622815602.4339209-CDS-S-ischiensis_contig11:1658181..16582501622815602.4339209-CDS-S-ischiensis_contig11:1658181..1658250Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1658182..1658250 +
1695739796.8949378-CDS-S-ischiensis_contig11:1658181..16582501695739796.8949378-CDS-S-ischiensis_contig11:1658181..1658250Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1658182..1658250 +
1622815602.4433484-CDS-S-ischiensis_contig11:1660219..16604201622815602.4433484-CDS-S-ischiensis_contig11:1660219..1660420Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1660220..1660420 +
1695739796.9033191-CDS-S-ischiensis_contig11:1660219..16604201695739796.9033191-CDS-S-ischiensis_contig11:1660219..1660420Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1660220..1660420 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2154.1prot_S-ischiensis_contig11.2154.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 1649156..1660420 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2154.1

>prot_S-ischiensis_contig11.2154.1 ID=prot_S-ischiensis_contig11.2154.1|Name=mRNA_S-ischiensis_contig11.2154.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=337bp
MDDIVAAYKLLEDLDNGKGAATPAAAAAAAATGPGANEEAAGAPVSPVEI
KDEVRAEVLSWYGTVLHLNSDLDGAMASYEKCVKVCGEEVSPDVLIKLAG
VHLDREDVDRAEMLMGTAIDADRGYGTSYMFKAQIAAVKGDQGEAISCLE
RCMALAPKHAAAYNRMVAMRVQAGQVAEANEVLEQGLKHNPKSCQLLVSK
GELIFSTAMMMQSAEGMIMSLEPFDKAMVADPLNPIPCVQKAMIVMQVQG
DTAQAKDLLHKALRADPNFPTCYLQLANVQINEATTLEEGEAAVRLYDKA
VELTRERSELLETMAVKVAAVAKLQGARSLGLTSLQ*
back to top

mRNA from alignment at S-ischiensis_contig11:1649122..1660429+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2154.1 ID=mRNA_S-ischiensis_contig11.2154.1|Name=mRNA_S-ischiensis_contig11.2154.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=11308bp|location=Sequence derived from alignment at S-ischiensis_contig11:1649122..1660429+ (Schizocladia ischiensis KU_0333)
ATGGCGGGTGGTCAAGCGGCGCTATGACGAGGGCATGGACGTGAGTGAAA AGAACAGAGAATTCCGGTTGGGGGGAGGGGGGCTCCCGACGAGAGATGAA GGCCTGGTGGGGGATGGAGACGGGGTACTTCAGCTCAATCGTGTCTCGAT TGAGGTGCAGGGTCAGTGTTCTCAGGATTAAAGCACGCACAGCGTGGGCA CATGTACTTCCAAGTATATACGACGTACCCCGCCTGCTCGGTAAAAACCC GGGATGCTCCGGCCCGGCGTAGTAGGGCTGCGTGGCCAATGGCCGCAAGG CTACCAAGTATGGGGACCGACCAGGGTCAGCACGGAGCATACTGGCCAGA GTCGGTGGCAAGCACAGGGTGGGATCCGCATCCGCCATGAGTACACACAC ACTGTAGTGTATGTCATCAGGTCACTGAGACTTGTGGGGTGCAAAGTCCC GCCAAGAACAGCAAAGGCTTCGGTGGGGGGGGGGGGCGGTATAAGCCCTG AGGTCAGAGAGACGTCTGGGGTGCAAAGTTCCCTTAGCCGAAAAGTTGAG GGTTCAGGGGGGGGGTAAGGAGGTGCTACCAAAAGACGTCTGGGGGGGAA ATTGTCCCCACCGCCGAAGAATGTGTTGCTTCCAATTGTACAAGTAAGGA AGTGAGACTTTGGGGGGGAGGGGGGGATCCGCCGTGAGTACCAAAAAGCG AGTACTGTACCCAAAGCCTCCCGGGGTGCGGGTCCCTCCCGACGGTGGGG CGACGGTGCGCTTGCGTTAAAGTGACTCTTATAGCTCAGACAACTTGAGA CGACCACGTGCGCCCTCTTCTATTTTGACATGTCTGGGGCCCAGGCCTGA TGTACGCACACGACCCCCCTCCTCTCACTCTGTCTCCTTCTCTCTCCCCC TCTCCGTCTCCATCTCTCTCTCTCACTCTCTCTCTCCTTCTCTCTCCCTC TCTCTGTCTCCCTCTCCCTCCCTCTCTCCTTTCTCTCTCTCCCCCCCGCT CCCCCCTCACCCTCTCTCTCTCCCTCCCTCCATCCCCCCCGCTCTATCTC TCTCTCTCTCTCTCTCCCCCCCCACCACCACCACCACCCTGCTCCGACGA ATCATAACCGTGCCAAACTCTCCTAACCCAATCGTATCCTCGTGGTGCCG CCTCTCCCTCTACGCTCCCCCCCCTGTCTAAGTACCAAGTACTCTCCTGC CCCCCCCCTCTCCCTCTTCCTCTCTCCGCGACTCCACCCTCTCCCTCTCC CTCCCTCTTCCCCCACACACCGCCCTTGACAACAAACCGTCCTTGCTTAC CCTGCCCTCCTGCTTTGCCAGGATATTGTCGCGGCCTACAAGCTCCTAGA GGACCTGGACAATGGCAAAGGGGCCGCCACTCCTGCTGCTGCTGCTGCTG CCGCTGCAACGGGGCCGGGGGCGAACGAGGAAGCGGCAGGGGCGCCGGTG TCGCCGGTGGAAATCAAGGACGAGGTGTGTTTTGTGGGCGGCAGCATAGG AGGAGGAGGAGGAGGAGGAGGAGGAGGGGGCAACATGGAGACTGCGCTCT TTGTGTGCTCCAATTGTTTGCTAGTGTACCATTTGATACTTTCCAAGTAC AGTATTTACAGGAAAAAAGCAGGGCGAGGTGCAGGCCACGTCACCAAAGA CCTCAACAGTGGCCCTTCCTTAGCTCACCACCTGGGGAAGGATTGTGTGG GGAAGGGGGGGGGGGGGGGGGGGGGAGGAGAAGGAGGAAGGAGAgGGGGG CGGGGGGCACATGTATGTATATACTTCGTATATACTTCGAAGTATATATG TTGGCAGAGGCGCGCGGTCAATGTCTCGGGACTGCAGCAAGCACAGCGTG AATACATACATATATATATATATACTTCGAAGTATATGTACTTGTCGAGG TGCTATAGGGCTACCCCGTCTCCTGTGCATGCCACCAACCATTGGCCCAG CATACTCTGTGCTGGGCAACACCGATCACAGTAGTACTCGAGTACAGTAC AGAGTACATAGTATATACGAAGTATGTATATATGTACTCACGTTGTGCTT GCCGTAGTCCCGAGACCATTGACCACGCGCCTCGGTCGAGACGGAGCAGA CAGAGTAGTACGTACTGTACAATGTATTACAACGTGAGTACATAGAGCTC TATATGTACTGCTATACTAGTGGTAGTAGCGGAACACTGTACTGTACAGT CCATCTCGGTCAATTCGCATGGTCAATGGTCTCGGGACTGCGGCAAGCAC GACGCGCGTACTTGGACGTACTCAAGTACTTATTGTAGAAGTGCATCTGT ATTCGTGTACGTAGTATGTACTACATGGTACAATAGAGAATGAGAACAAG CGAGGTGCGGGCATGTCCCTAATGGTCGCAACAACACACATGCACACATT CAAGCATGCACGCGTATGTGTGTACTCATCGGCCTACTTGTGTTGTGACA TAACCTACTGTACAATACGTGCTTAATCGACACCCCACATTGAAACTTGG TGTTCTGCCCTGCGACAAGCGACAATAGTGTCCTATGTAGCCATAGACTC TCACATCCCAACTAGGCCGGGACGGAGCATGCCAGGTTTGCAACGGCCAG GCCGCGCATTTGCTGTGTGTATAGGCCGTCAACGGCGCATGGTCAATGGT CTCGGGACGGCCGCAGCAAGCGCGACGCGATTATTTACACAGACACACCT GCGCAGGCGTAGACTGTTTGTTTAGAAATAGTCCAGCGAGTTGTAGGCGC CGTGATTCCGTTCCAAGACTGGCACTTACTTCGAAGTAGCAGAAGAGTTA TGCCCTTCATTCCCTCGCAGGGCAGAAAGAAGATACAACGGCAACGGCAA CGGCAAGAGAGCAGAGGACAGGAAAGGGATTTTGGGAAGGGAAAACCTCG TGCGCTCACGGCGGGAACGGCGCGAGCGAGCCTATGTCGAAATTCCGACG CCGCGCGAACTGCTCGCCTGAGTGGGTGGTGATAGAGAGATGACGCGGCG CGATTGTTTTATCGATCGCGGCGGTCAGGTGCGGGCAGAGGTGCTGTCGT GGTACGGGACGGTGCTGCACCTAAACTCCGACCTGGACGGGGCGATGGCG TCGTACGAGAAGTGCGTGAAGGTGTGCGGCGAGGAGGTGTCCCCGGACGT GCTCATCAAGCTGGCGGGGGTGCACCTGGACCGAGAGGACGTGGACAGGG TGAGAGAGCGGGGTTTGTTTCGTGCCGCCTGCATTGCTGTTTGCTGTTGT GCGGGTATGTCGGTTGTGGAAGTGCAGTAAAGTGAGTTGTTTTGTGGTGC TACTGTTGTGGAGTTGTGTTTTGGTTGTGGAAGTACTGTACTGTAAGTGA GTTGTGTTGTGGTGGTACTATTGTAGAGTTGTGTTGGTTGTGGAAGTGCT GTAGAGTGACTTGTTGTGGTGGTAAGTACTATTGTAGAGTTGTTTTGGTT GTGGCAGTACTGTACTGTAAGTGAGTTGTGTTGTGGTGATACTGCAGGTA GAGTTGTGTTGGTTGAGGGAAGTACTTCGAAGTACTGTACTTCCGGACGG AAGAGGTGTTAGCTCTACTGTACTGTACTGCAGGCCCTGTATGTACTACT TGTTCGTATGAATGCTCGCTTGTGTACTACTGTAGAGCTGTGAACTGGCA CGACAGCCGCCGGTTGAAGCTATGGCCTGGTATTGGGCCGGTTCGACTCG GCCTTTTTTTTTACCGGTAAGTTTCCGCGTGATGAAGGCTACGTTTTGGC CGAAACCGGCGACAACGGTAATGTCGCCGTGCACCGGCTATATACCGATC GCCGCAACATGCACGATTTCAGAGGATAACAAACCGGCGAGGCTTTGGCC GGTTCAACCGTTCGGCTGTTTAACCGGAACCGGCCGGCATAAACCGGCTC CGGTCGACAGCTCTATCGCTTGCGTTGTGACAAGCTTGCCGCAGTTAGTC CCGAGACCGTTTTGCGTGGGCCTCGACTGAGATGGAGCAGTCCTTCTGCT GCGATTGCTACCGTATGTACGTGCTTCATGGGGCTGTAGTGCGGGAGGGG GGCGGGTATTGTATTGAGCTCTGTCTCAGCGAGACGTGGTCAATGGTCTT GGGACTCTGGCACAAGCACAATGTGAGTAGAGTACACATAGTACTCGTAG TATATTTATTGGACTTATAGAGAGGAGGTATGTCAACCCAACGCTCGTCG CCGATGTGCGGTGCTAGGCGCCCTCCCACTTCCCCAGCCCCCTCCCCCCC CCCGTCACTCACATCGCCCAGCTCATCCCCCCCCGTTCAGCTGGTCCAAA ACGCCCCATGCCATGGCAACCTCAACTATTTACAGGAGAGCTTAGTCAGG AATCTTTGTGCTTCGAGTACTTTATTGTTTAAGCTTAGCTACTGGGCGTT GTCAGCTAATGCATATGCAACACAGGTTGTCACGCCGACTGTGGTACTAC CTAGTTAGGCGGGGTCGTGTGGACCTACGGGCAGTCCGTGTACTCGAGTA CAGTACCGCTGTCCCCTCTCTCTCATGTCTGCTACTTCCGGATCTATAGT ATACATTGTATACGAAGTAGACGTTCAATTCCTTGCAAGTAGTGGCGCTC GCGCTGGTCCACTTCGACCGGGATCCAAAATCGCCGGCACGGGTTGACGC CTTTCCCCCATGGGTAAAGAAGTGATCCGCTTGCCCGCTCGCTCGCCTCG CTCTTTGGCACTGCCTCTGTCTGCTGTGGGCAGGCGGAGATGCTGATGGG GACGGCCATTGACGCCGACCGCGGCTACGGCACCAGTTACATGTGAGACC CCCTTGCCTCTACTCGCTGTGGGACTGGAGGTGCTGTACCTACCGGCGAT ACCGTGTACAGTATCTGCTTGTACTGCTTGGGAGTGCTCGCGTCGACTGC AGGTACTCACGTTTTGATGTCATGTGATGTGATGGGTACTCTAGCGTGGG TAGTGGATATCAGTATCATATGACATCACAGTAAGTAGTTGATATCATAT CACATCAGCCCTCGCGTCGTGCTTGCTGCAGCCCAGGGACCGTTGTTGAC CGGCGGGAGTTCGTGGAAAACATTCCGCGCTTCGTGTCGGCCCTCTCGCT CCGCCGTGGCTTGCCGGGGACAGGAGGGAGGGAGGAGGGAGGGAGGGAGA GACTTAACTCAGAAGTGGGCAAGCACGGGGTTGACCGTCTGTGGGCTGTG CCATGGCACGCTTAGCGTGTGCAGTTTAAGCACTCGCTTGTGTACTCTTG GCTGTGCTGTGCACGCTTCCAACTGCCCGCTTGGCCTTCAACTTGCGGCA TTTCACGTAGTGTGTGTCCTGAGTAGAGTAGGCCAAGTATGGTAGTGTTC TGCACGGGTGCGTGCGACACGCGGCTTTGCCATCGTGGCTCATCTCTTGT GCGGAAATGGAGACGAACAGAGACACGCTTTCTGGTCGATATTTCTTGTT GGACCCGGCGCTCGAGTACGTCGTAGGAGGGCCTTTCCGTTGCACAGCCA CCGTTGCTGCCGCCAGCGTCCCCCCGGCGCGTGCCTCTGCGCTGACCTTA TGGTTCTGCGTCCAAGCGCGCACTGCGAACTACAACGATGTTTTGACAAG TATGTTTTGTACGTGCAGTAGTGTATATAGTCCAAAAGCAGTGCCGCCGT GGCACATAAGGTCGCCTCGCTGAGCGCGCCAACCATGACGAGAGAGCGCC AACCATGACCACGGGGCCACGACTGGTCGGTTTGGTGGAAACTTGCGTTC TTGCACCCTTGGGAGTGATGATGTCATGGTCGCAGGCATTATGCCCTTGC CATTGGGTTACCCCCGGGATCTGCATCTCCCATGCACGTAACACGCCTCT TCCCCCCCCCCCCCGCCTCCCCCTCCCCTTTCCCCCTCCTCCTTCCGCAC CCCCTCACCCTCCTGCTGCTACTGCCGCTGTTGCTGCTACTGCTGCTGCT GCTGCTCTGCCACCGCCCTGGGCCCACTGCCGGGTTTGGCCGCCCCCGCC CACCGCGGGTGGTCGTTTTGGACTGTTTGCTGCTGCCAGGTTCAAGGCCC AGGTGCGCCGTGGCCCTTCCCTACATACCCAATCAACTGCACAAAGTACT TGAAAGTGCAGCACATGCTTGTGCACTTACCGTATTTGCCAGAGGGGTCT TTGGTGTGATGCCATGTCAAACTACAGCATCGTACCTTAGAGTACGCACT ACACGACATCGAATCGAACCAAGTCACATCACTTCCCGTATGTACAATAT TTGTCAGACAGGCAAAGATATTCCCCCCCCGTGCCAACGTGTGGGAGGGC ATCGCTCGCCGAATGCTTGGTCGGATTCGCGGACACGGGAACACTTCGAA CAACCCGCTCGGGGACCTGTTGTACGGTATTGCGCGAGGTGTTTTCCCCC CGTGAGATTTCGGGACCATTCAGGGCCTGCTTGCCTCCCTCCTCGGCAAG AAACATTGTCGCGAGAGTTATCCCCTCAAATGTGATTGATGTCCTGTTTT AGCTGAGAGAGGAGTGGTGATTGGTTAAATGGGCGCTATACAAGCTACCG TACTCGTACAGCATTTGCGGACATGCTGCGAATACGCCTCGTCCCAGATG GCGGTGAGGTTTTGGTACTCGCGAAGCATTGTTTATGCTACGTAGTATAT ATATATATGTACTCACGCGGTGCTTGCCGTAGTCCCGAGACCATTGACCG CGCGCCTCTGTCGAGACGGCGCATTGCAGTACATCACTACAGTATTTTGG CATAACTTTGTGTTGAGTTTTTCTCCTCACTGCCCCCCCCCCTCTATGCC CCCAAATCCCCCCAGATTGCGGCGGTGAAGGGTGACCAGGGAGAGGCCAT CTCCTGCCTGGAGCGTTGCATGGCCCTCGCCCCCAAGCACGCGGCGGCCT ACAACCGCATGGTGGCTATGCGCGTGCAGGCGGGGCAGGTGGCCGAGGCC AACGAGGTGCTGGAGCAGGGCCTCAAGCACAACCCCAAGTCCTGCCAGCT GCTCGTGAGCAAGGTGAGGGCAGGGGCGGCGACGTGAATCAACCCTTAGA GGAGCAAAACTGAACCGTTAGAGGAGTTAAGTAAGCTCAACCGTGAGAGG AGTTCAGCCTACCTTTTGAGGAGTTAAGCTCAACCCTTGGAGGAGTTGAA ACCCTTAGAGGAGTTAAACTTAGCCATTGGAGGAGTTGAACTTACATTTC GAGGAGGTAAGCTTAACCCTTAGAGGAGTTGAGTAAGCTCAACCGTGAGA GGAGTTAGCTTACATTTCGAGGAGTTAAGCTCAACCCTAAGAGGGGTTGA ACTCGACCCTTAGAGGAGTTAAACTTAGCCCTTAGAGGAGTTGAACTTAC ATTTCGAGGAGGTAGGCTCAACCCTTGGAGGATTTACGCTAAACTAATAG AGGTTTTAAACCCCAGCCCTAGCAGGAGTTGAACTTGACCCTCAGGGGAG TTAAGCTTACCCCTTGGGAGGAGCCAAGAAAACAACAATGATGCGCTACT GTAGACCGTAGGAGTTCAGGCAGGAGTCAGTGTGCCGTCCGGCTTTGAGC TTCTCTGAGGGTTTCAGCTCCGAGCATTCGATGTGTGCTTCATCGACACT TCCCTGGACGTACTTTGAACCGGGTGTGGCGTGGCGAGTGTGTGATTCGG TGTGGTGCGATGCGATGCGGATGCCAAAACGAGTACCGTGGCAGCAGAGC GCCCTCCCCACACATCGCTCCATGTGCTTATATTCTGTACTCTCCGCAGT GGCCTGTGAGCTCACGGAAAGTTCGCTGTGCATGTACAGTAGAGCATTGT ACAGTTGCTCTACAGTAGACCTGCTCCACACCCAGCGCAAATCCTTCTCG CTGTCTTGAACCCGTACGAGTACTTGTACCGTACGTATGCGACCATGGCG GAGGGGTGTCCCCCGTCCCCTCCCGCTCTGGGCGGGGGCCTTGTCCGTCT CCATCGAGGCGCGCACTCAGTGGTCTGGGGACGGACTATGTATACGGCCT ATGCCAAGCACAGCGTGAGTAGCTAACTGTAGCACGTATACCCTACGTAT GTGGAAATACTTGCAAGTCCTTGGACGTATAGTATGAAGTACTTCGAAGT ACTCAGTACAGTGCTTTGTGTGATGCGCAGAGGGGGGAGCTTATCCTCTA CTGTAGCACGGCCAGTACTTGCAAGTACATACATCTACTCACGCTTGTGT CGGTGTGTGTGGGGTGCAGGGGGAGCTCATCTTCAGCACGGCCATGATGA TGCAGAGCGCGGAGGGCATGATCATGTCGCTGGAGCCCTTCGACAAGGCC ATGGTGGCCGACCCCCTCAACCCCATCCCCTGCGTGCAGAAGGCCATGAT CGTCATGCAGGTGCGGTGTTTGCCGATGTGATGTGATGTGGTGTGGTGTG GTGTGGTGTGGTGTGATGCCTTCACTGTTGTACTTCCAGCAAGTTCTGTG CTGTAGTCGTGTACTCAAAAGTATGTATTGCTGTAGTGTCTAGGTAGTGA CAGGAAGAACACAGGGCGAGGTGCAGGCCACGTCACCAAAGACCTCAACA GTGGCCCTTCCTTAGCTCCCCAGGGAAGGGTTGTGTGGGAGGGGGAGAAG AGGTGGAGAAGGAGAGAGAGAGAGAGCAGGAGGAGGAAGGATAGGAGGGA AGGGTTGTGTGGGAGGGGGAGAAGAGGTGGAGAAGGAGAGAGAGAGAGCA GGAGGAGGAAGGATAGGAGGGGGGAGGGGCGGCCCCCGTGGGGGGCGGGG AGCGGTGTGGTAGGTGACGATGCAGAGTAGGCAGTGACAGAGTAGGCAGA GTCACCACGTCGCGTAGATTACCTGTGTGGGGTTGTGAGCAAGCAGGAAA GGGATCACCGTGTGAGCGTGGGACCACCGTACCGCAAACACCAAGCACCA GCAGTTAGGCAGGCTCCGCTGGGGGACCGGCGTGCCCATACTGACGAGTG CTGTGCGTACTGTACCTCACAGCTGCAGCACTTCCTCCTCTCCTCCCCAT CGTGCCTTCGTACCCTGCTGCAATCCACAACCCCTCCGCACACACACGTC TTGCTGTCAGGTGCAAGGGGACACGGCGCAAGCCAAGGATCTCCTCCACA AGGCCCTGCGGGCCGACCCCAACTTTCCGGTGGGCTACAGTGGATTGCCG TTCATGTGCCATGATTTGGGGGAGATCTTGGCCCCCCCCGCCCCCGGGAC CATTTCCGGTAGTCGAGTACAACATATCTCGCCGGACAGGTCCCGAATGA CCCCCCTCCCAAAATCCCTCGCGGAGGTTCCTCCCTTGCAGTCCTAGGTT AGTTTTTTTCTGGGCTACTTCCGGAAGTACAAGCACCCCGTGCGAGTATG TCTCCGGCAAGAAACAGTGATGTAAACAGTGATGTGAACAGTCCAGTACT TCCAAGTGTCTAGATACGTACAGTACAGTACATCGAAACGACTACGTATC GAATATTAAGCACGTCGATGGCGGATCGATCCATTGCTGGATAGACCATG CACCGACCTCGGCGCGCCCCCCCCCCAGTATTGAAATGCAGTGTACTGAC CCGGAGCAGTAGACCGTGCTTCCCCCACACGCCTTTGCACGGACGTCAAC ACATAGGAAGTACTTCGAAGTACTCAGCATCAAAACGAAATACTGATACT TCGAAGTACTTCCGGAAGTAGTATTATCATGTGTTGTTCGACATGTACTT AATTGGAGGCGCGTGGTCAATGGTCTCGGGACTATGGCAAGCACCACGTG AGTACATATATATACGTACTTCGAAGTACATGGTATTATCATGTGTTGTT TGATACGTACTTGCATAGATTCGCGTCAATATTCCATAACTGGCGAGAAC TGCCCCCCGACTATTGGCTCATGGGGAGGCAAGATCTTCCAACTCTCCGG CAAGTGCGGGAAGGCTATGCCGTTCTCGGCAACATTGGGCTTTGCGAGTC CTTGCATGGCAGTAGTGCGCTGTTTGTAGAGTAGAGTAGAGTACGGTGCA GTACAGTACGCGACACCTTGTAAGAACGGTGCCAATGAGAGTGAAACGCT TGCGGGCGGCGATAACTGAAGAACATCGGAAGCCCTCATACCGTCGGCGG TATAGGAAAAGTCGCGCATGCCTTCCAAGGGCTCCTAGGGTCACCGATCG CGGCAGCCTCGCTCGGCGAAAGCGATACGGACTCCACTTATGGCGTCTGA CTTGAAGGTCGGGAGGGCTGCTCGACAGACAGTACAGTGTCATGAATGGC CTGTTGCGAGCCAATTCTGCCGAGTTCAAGACGGTTGTTGTTGTTGTTGT TGTGTGTGTGTGTGTGCGTGTGTGCGTGCGTATTTGTGTGCCTGCCGCGA TGCTCTTTTTCGACCAGAAGCGGATTACACGGGGCACTGTCATGTGTTTC CCCTCAGCTACTTCGTACTACGTAGCACGAGTGCTGTTACGTTGCACCAT TTCCAAGTACGTTCAGCACAGTACTGTCCCACAGCGCAGCATTTGGGGGA ACACCCGGCTGCGTGTACTACTGTACTGCGGCAGTCCACTGCACTACGTA CTGTAGTACGTGTCGTCCTCCTGGTACAGTGCCGTGTACTGCTCCAAAGT ACTTCCAGTACAGTACGAGCACAGTAGCACGCATACTGTACGCAGCTGAA CAGTGGTCATTCCTCAAGGTACTTACGAAGTAGGAAATAAGTGCTCTAGG TACTGTACCGCGTAGCACTTGCAGTGCTTAGCTGCGCAGGTGTTCTGCCC CTGCCTCAATGCGCCCTGGGCATGGCCCCTGCGCCCGCGGCCACTGCCGC CTCCACCACCTCCCACTACCTCCACAACCTGCAATCACCCACCACGACAA ACACCTCCACAACCCGCCGGCGCCGGCGCCACCACCACCACCACCACCAC CACCGCAACCACCACCTCCACCCCGCCAAATAACCTACCACCACCACCAC CACATCCGCCACCATCACCTCCATCACCGTCACCTCCACCCCCGCCACAA CCTCCATCACCGCCACCGCCACTGCCGCCGCCGCCGCCGCCGCCGCCGCC AACCCACGGTGACTGCGTGCGCACACCTTCCTCTCGGCCGTCCGACAGAC ATGCTACCTCCAGCTGGCGAACGTCCAGATCAACGAGGCGACGACCCTCG AGGAGGGGGAGGCGGCGGTGCGCCTGTACGACAAGGCAGTGGAGCTCACA CGGGAGCGGTCGGAGCTGCTGGAGACCATGGCGGTAAAGGTGGCGGCCGT GGCGAAGCTGCAGGGCGCCCGCAGCCTCGGCCTCACGTCCCTGCAGTGAA GGGGGGGG
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig11:1649122..1660429+

>mRNA_S-ischiensis_contig11.2154.1 ID=mRNA_S-ischiensis_contig11.2154.1|Name=mRNA_S-ischiensis_contig11.2154.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2022bp|location=Sequence derived from alignment at S-ischiensis_contig11:1649122..1660429+ (Schizocladia ischiensis KU_0333)
ATGGACATGGACGATATTGTCGCGGCCTACAAGCTCCTAGAGGACCTGGA
CAATGGCAAAGGGGCCGCCACTCCTGCTGCTGCTGCTGCTGCCGCTGCAA
CGGGGCCGGGGGCGAACGAGGAAGCGGCAGGGGCGCCGGTGTCGCCGGTG
GAAATCAAGGACGAGGATATTGTCGCGGCCTACAAGCTCCTAGAGGACCT
GGACAATGGCAAAGGGGCCGCCACTCCTGCTGCTGCTGCTGCTGCCGCTG
CAACGGGGCCGGGGGCGAACGAGGAAGCGGCAGGGGCGCCGGTGTCGCCG
GTGGAAATCAAGGACGAGGTGCGGGCAGAGGTGCTGTCGTGGTACGGGAC
GGTGCTGCACCTAAACTCCGACCTGGACGGGGCGATGGCGTCGTACGAGA
AGTGCGTGAAGGTGTGCGGCGAGGAGGTGTCCCCGGACGTGCTCATCAAG
CTGGCGGGGGTGCACCTGGACCGAGAGGACGTGGACAGGGTGCGGGCAGA
GGTGCTGTCGTGGTACGGGACGGTGCTGCACCTAAACTCCGACCTGGACG
GGGCGATGGCGTCGTACGAGAAGTGCGTGAAGGTGTGCGGCGAGGAGGTG
TCCCCGGACGTGCTCATCAAGCTGGCGGGGGTGCACCTGGACCGAGAGGA
CGTGGACAGGGCGGAGATGCTGATGGGGACGGCCATTGACGCCGACCGCG
GCTACGGCACCAGTTACATGCGGAGATGCTGATGGGGACGGCCATTGACG
CCGACCGCGGCTACGGCACCAGTTACATGTTCAAGGCCCAGGTTCAAGGC
CCAGATTGCGGCGGTGAAGGGTGACCAGGGAGAGGCCATCTCCTGCCTGG
AGCGTTGCATGGCCCTCGCCCCCAAGCACGCGGCGGCCTACAACCGCATG
GTGGCTATGCGCGTGCAGGCGGGGCAGGTGGCCGAGGCCAACGAGGTGCT
GGAGCAGGGCCTCAAGCACAACCCCAAGTCCTGCCAGCTGCTCGTGAGCA
AGATTGCGGCGGTGAAGGGTGACCAGGGAGAGGCCATCTCCTGCCTGGAG
CGTTGCATGGCCCTCGCCCCCAAGCACGCGGCGGCCTACAACCGCATGGT
GGCTATGCGCGTGCAGGCGGGGCAGGTGGCCGAGGCCAACGAGGTGCTGG
AGCAGGGCCTCAAGCACAACCCCAAGTCCTGCCAGCTGCTCGTGAGCAAG
GGGGAGCTCATCTTCAGCACGGCCATGATGATGCAGAGCGCGGAGGGCAT
GATCATGTCGCTGGAGCCCTTCGACAAGGCCATGGTGGCCGACCCCCTCA
ACCCCATCCCCTGCGTGCAGAAGGCCATGATCGTCATGCAGGGGGAGCTC
ATCTTCAGCACGGCCATGATGATGCAGAGCGCGGAGGGCATGATCATGTC
GCTGGAGCCCTTCGACAAGGCCATGGTGGCCGACCCCCTCAACCCCATCC
CCTGCGTGCAGAAGGCCATGATCGTCATGCAGGTGCAAGGGGACACGGCG
CAAGCCAAGGATCTCCTCCACAAGGCCCTGCGGGCCGACCCCAACTTTCC
GGTGCAAGGGGACACGGCGCAAGCCAAGGATCTCCTCCACAAGGCCCTGC
GGGCCGACCCCAACTTTCCGACATGCTACCTCCAGCTGGCGAACGTCCAG
ATCAACGAGGCGACGACCCTCGAGGAGGGGGAGGCGGCGGTGCGCCTGTA
CGACAAGGCAGTGGAGCTCACACGGGAGCGGTCGGAGCTGCTGGAGACCA
TGGCGGTAAAGGTGGCGGCCGTGGCGAAGCTGCAGGGCGCCCGCAGCCTC
GGCCTCACGTCCCTGCAGTGAACATGCTACCTCCAGCTGGCGAACGTCCA
GATCAACGAGGCGACGACCCTCGAGGAGGGGGAGGCGGCGGTGCGCCTGT
ACGACAAGGCAGTGGAGCTCACACGGGAGCGGTCGGAGCTGCTGGAGACC
ATGGCGGTAAAGGTGGCGGCCGTGGCGAAGCTGCAGGGCGCCCGCAGCCT
CGGCCTCACGTCCCTGCAGTGA
back to top