mRNA_S-ischiensis_contig11.2149.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2149.1
Unique NamemRNA_S-ischiensis_contig11.2149.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig11.2149.1 vs. uniprot
Match: D8LHX5_ECTSI (Predicted hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHX5_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 3.100e-80
Identity = 149/222 (67.12%), Postives = 169/222 (76.13%), Query Frame = 1 
Query:    1 QVCAFVREVVGGEAVVVGNSLGGYTALAAAAHLPEDIKGCVLLNAAGRFSDPEADA--KAAEAAAREKTF---WDQAVEAVSAALQRAIIIASFYYTKQPLRIKQVLSQVYIDRRNVDEELVESIRYASLHPNAPEVFYRVIARNGRGPPTTVNDLLAKLTTPLLLLWGEQDPWIRPTAADKIQALHPPAERVWVQAGHCPHDEAPEEVNGALLGWLKSIGY 651
            QVCAFV EVVG +AVV GNSLGG+TALAAA+H P  IKGCV+LN AGRF D E +A  +  + A     F   WD+A++ V   +QRAI  ASFYYTKQP RIKQVL+QVY D RNVD+ELVESIR  SL PNAPEVF RVI+R G GP  TV++LL   T+PLLLLWGE DPWIRP AADKIQ L+P A R  VQAGHCPHDEAPE VN AL+ WLK+IGY
Sbjct:  217 QVCAFVTEVVGADAVVAGNSLGGFTALAAASHAPNSIKGCVMLNGAGRFRDREQEALLEVQKNAPPRPPFLLAWDEAIKYVGTFVQRAITRASFYYTKQPARIKQVLTQVYPDPRNVDDELVESIRVPSLDPNAPEVFQRVISRTG-GPGLTVDELLEGFTSPLLLLWGELDPWIRPAAADKIQGLYPEATRFSVQAGHCPHDEAPEVVNDALVSWLKTIGY 437
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BLAST of mRNA_S-ischiensis_contig11.2149.1 vs. uniprot
Match: A0A6U1NRJ5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NRJ5_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.040e-73
Identity = 144/234 (61.54%), Postives = 168/234 (71.79%), Query Frame = 1 
Query:    1 QVCAFVREVVG------GE-----AVVVGNSLGGYTALAAAAHLPEDIKGCVLLNAAGRFSDPEADAKAAE--AAAREK------TFWDQAVEAVSAALQRAIIIASFYYTKQPLRIKQVLSQVYIDRRNVDEELVESIRYASLHPNAPEVFYRVIARNGRGPPTTVNDLLAKLTTPLLLLWGEQDPWIRPTAADKIQALHPPAERVWVQAGHCPHDEAPEEVNGALLGWLKSI 645
            Q+ AF+REVVG      GE     AVV GNSLGGYTALA +A  P  +KGC+LLNAAGRF  PE   KA E  AA +E        ++  AV A+  ALQR +I ASFYYTKQPLRIKQVLSQVY D +NVD++LVESIR+ + +PNAPEVFYRVI RNG GP T+VN LL +L+ PLLLLWGEQDPWIRP AA KI  ++P AE V + AGHCPHDE P+EVN A+L W   I
Sbjct:  189 QIAAFIREVVGVGMSEEGEGGVERAVVAGNSLGGYTALATSAVYPSLVKGCILLNAAGRFDPPEDVLKAQEEQAATQEAGQAWPPQWYKDAVAALGQALQRGVIQASFYYTKQPLRIKQVLSQVYTDTKNVDDDLVESIRFPAENPNAPEVFYRVIRRNGGGPQTSVNTLLQQLSVPLLLLWGEQDPWIRPAAAQKIMEIYPSAEMVPLVAGHCPHDEVPQEVNQAILEWSAKI 422
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BLAST of mRNA_S-ischiensis_contig11.2149.1 vs. uniprot
Match: A0A7S1ZKC8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZKC8_9STRA)

HSP 1 Score: 224 bits (572), Expect = 7.940e-62
Identity = 124/222 (55.86%), Postives = 152/222 (68.47%), Query Frame = 1 
Query:    1 QVCAFVREVVGGEAVVVGNSLGGYTALAAAAHLPED----IKGCVLLNAAGRFSDPEADAKAAEAAAREKTFWDQAVEAVSAALQRAIIIASFYYTKQPLRIKQVLSQVY-IDRRNVDEELVESIRYASLHPNAPEVFYRVIARNGRGPPTTVNDLLAKLT-TPLLLLWGEQDPWIRPTAADKIQALHPPAERVWVQAGHCPHDEAPEEVNGALLGWLKSIG 648
            Q   F+ EV+G    VVGNSLGG+TAL AA+   +     I GCVLLNAAGRF +P+A  +    A          ++A++  ++RA+I  SF YTKQP RI+QVL QVY I+  NVDEELVESIRY SL PNA EVFYRVI +NG GP   V+DLL  L   PL+L WGE DPWIRP AADKIQAL+P + RV + AGHCPHDEAPE+VN A+  ++  +G
Sbjct:  141 QTVDFIEEVIGKTTTVVGNSLGGFTALYAASSSAQSEKSLINGCVLLNAAGRFKNPDAPPEKEPNAI---------IDAIATLIKRAVIQLSFIYTKQPARIEQVLRQVYPINANNVDEELVESIRYPSLDPNAAEVFYRVITKNGSGPQVYVDDLLQDLNGIPLMLCWGENDPWIRPAAADKIQALYPSSLRVSIDAGHCPHDEAPEDVNLAVRNFMSQLG 353
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BLAST of mRNA_S-ischiensis_contig11.2149.1 vs. uniprot
Match: A0A7S2S3N1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3N1_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.390e-57
Identity = 119/218 (54.59%), Postives = 147/218 (67.43%), Query Frame = 1 
Query:    1 QVCAFVREVVGGEAVVVGNSLGGYTALAAAAHLPEDIKGCVLLNAAGRFSDPEADAKAAEAAAREKTFWDQAVEAVSAALQRAIIIASFYYTKQPLRIKQVLSQVY-IDRRNVDEELVESIRY-ASLHPNAPEVFYRVIARNGRGPPTTVNDLLAKLTT---PLLLLWGEQDPWIRPTAADKIQALHPPAERVWVQAGHCPHDEAPEEVNGALLGWLK 639
            QV AF+REVV   AVVVGNSLGG+TAL  AA  P+ +  CVL+NAAGRF     +A+A   + + +      +E+V     + ++ ASF+ TK+P RI Q+L QVY + + NVDEELVESIR  A   PN  EVFYRVI+RNG GP   ++DLL KLT    PL LLWGEQDPWIRPTAA KIQ L P +  + + AGHCPHDEAP +VN AL   L+
Sbjct:  150 QVAAFIREVVRAPAVVVGNSLGGFTALYTAAECPDIVSSCVLVNAAGRFRGETEEAEAMATSGQRRP---GVLESVKRFFGKVVVYASFFVTKRPARISQILRQVYPVRQENVDEELVESIRLPAESSPNCAEVFYRVISRNGNGPRVAIDDLLPKLTAAQVPLWLLWGEQDPWIRPTAAAKIQRLKPDSRLITINAGHCPHDEAPRDVNAALRSVLQ 364
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BLAST of mRNA_S-ischiensis_contig11.2149.1 vs. uniprot
Match: A0A7S2EXP3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXP3_TRICV)

HSP 1 Score: 204 bits (520), Expect = 3.700e-57
Identity = 112/177 (63.28%), Postives = 126/177 (71.19%), Query Frame = 1 
Query:  118 CVLLNAAGRFSDPEADAKAAEAAAREKTFWDQAVEAVSAALQRAIIIASFYYTKQPLRIKQVLSQVY-IDRRNVDEELVESIRYASLHPNAPEVFYRVIARNGRGPPTTVNDLLAKLTTPLLLLWGEQDPWIRPTAADKIQALHPPAERVWVQAGHCPHDEAPEEVNGALLGWLKSI 645
            CVLLNAAGRF DP  DA A +       F    VEAVS A+QR +I ASF YTKQP RI+QVL QVY I+   VD ELVESIR  S  PNA EVFYRVI +NG GP T V+DLL  L  PLLL WGE DPWIRP AADKIQAL+P ++RV + AGHCPHDEAPE VN A+L ++  I
Sbjct:    1 CVLLNAAGRFRDP--DAPADDGTKEPNPF----VEAVSKAIQRLVIAASFVYTKQPARIEQVLRQVYPINADMVDPELVESIRVPSTDPNAAEVFYRVITKNGSGPQTYVDDLLQTLDCPLLLAWGESDPWIRPAAADKIQALYPRSKRVSIDAGHCPHDEAPEAVNAAILDFMAEI 171
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BLAST of mRNA_S-ischiensis_contig11.2149.1 vs. uniprot
Match: A0A2P6TI17_CHLSO (Chloroplastic isoform X2 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TI17_CHLSO)

HSP 1 Score: 211 bits (537), Expect = 2.070e-56
Identity = 115/220 (52.27%), Postives = 146/220 (66.36%), Query Frame = 1 
Query:    1 QVCAFVREVVGGE--AVVVGNSLGGYTALAAAAHLPEDIKGCVLLNAAGRFSDP--EADAKAAEAAAREKTFWDQAVEAVSAALQRAIIIASFYYTKQPLRIKQVLSQVYIDRRNVDEELVESIRYASLHPNAPEVFYRVIARNGRGPPTTVNDLLAKLT-TPLLLLWGEQDPWIRPTAADKIQALHPPAERVWVQAGHCPHDEAPEEVNGALLGWLKSI 645
            Q+  F++EV+GGE   V+VGNSLGGY ALA AA  P+ +KG VLLNAAGRF +   E+  +AA A   ++  W   VE V  A++RA + ASF +TKQP RI+QVL QVY+  RN+D++LV SI   +  PNA EVFYRVI   G      +N LLAKL   PL LLWGE+DPW  P  AD+IQ  +P A R  + +GHCPHD+ PE VN  LL WL ++
Sbjct:  187 QIADFIKEVIGGEEPVVLVGNSLGGYNALATAARNPDLVKGVVLLNAAGRFEEAGEESSEEAAVATPEQQNLWSGLVEQVGTAVKRAAVFASFVFTKQPARIRQVLGQVYVSDRNLDDDLVRSISLPAQDPNAAEVFYRVITARGEA----MNRLLAKLDGLPLYLLWGEKDPWCVPARADQIQRYYPAATRTDINSGHCPHDDTPELVNERLLQWLSNL 402
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BLAST of mRNA_S-ischiensis_contig11.2149.1 vs. uniprot
Match: B5YNN1_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNN1_THAPS)

HSP 1 Score: 201 bits (512), Expect = 4.140e-54
Identity = 115/228 (50.44%), Postives = 147/228 (64.47%), Query Frame = 1 
Query:    1 QVCAFVREVV-------GGE---AVVVGNSLGGYTALAAAA--HLPEDIKGCVLLNAAGRFSDPEADAKAAEAAAREKTFWDQAVEAVSAALQRAIIIASFYYTKQPLRIKQVLSQVY-IDRRNVDEELVESIRYASLHPNAPEVFYRVIARNGRGPPTTVNDLLAKLTTPLLLLWGEQDPWIRPTAADKIQALHPPAERVWVQAGHCPHDEAPEEVNGALLGWLKSI 645
            QV  FVRE+V        GE     + GNSLGGYTA  A++   +   +KGC+LLNAAGRF DPEA  +       +    +  V++VSAA+QR +I  SF YTKQP RI Q+L  VY I+  NVD ELVESI+  +L PNA EVFYRVI +NG GP   V+D+L ++  P+LL WGE DPWI+  AADK++ LH     + V AGHCPHDE PE+VN A+L ++  I
Sbjct:  100 QVVDFVREIVLPEGEEGSGEERMVAIAGNSLGGYTAAYASSDERIKHVVKGCILLNAAGRFRDPEATVE-------DTATPNPIVKSVSAAIQRFVIACSFIYTKQPARITQILKNVYPINNANVDSELVESIQTPALDPNAAEVFYRVITKNGSGPQAYVDDILKEMECPVLLAWGESDPWIKSAAADKMERLH---AEISVDAGHCPHDENPEQVNKAILDFVDEI 317
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BLAST of mRNA_S-ischiensis_contig11.2149.1 vs. uniprot
Match: A0A150G4Y1_GONPE (AB hydrolase-1 domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G4Y1_GONPE)

HSP 1 Score: 199 bits (507), Expect = 5.350e-53
Identity = 109/239 (45.61%), Postives = 155/239 (64.85%), Query Frame = 1 
Query:    1 QVCAFVREVVG---GEAVVVGNSLGGYTALAAAA-HLPEDIKGCVLLNAAGRFSDPEADAKAAEAAA-REKTFWDQAVEAVSAALQRAIIIASFYYTKQPLRIKQVLSQVYIDRRNVDEELVESIRYASLHPNAPEVFYRVIARNGRGPPTTVNDLLAKLTTPLLLLWGEQDPWIRPTAADKIQALHPPAERVWVQAGHCPHDEAPEEVNGALLGWLKSIGY*FDLAEAAVQG*ATGVH 702
            QV AF+REVVG   G  V+ GNSLGGY ALA AA H P+ ++   +LN AG F +   +A A EAA   ++++W +   +V+A+++R ++  +F  TKQP RI++VL  VY+D  +VD++LV SI   +  P A +VF+ +++ + RGPP  V+ LLAKL  PLLLLWG++DPWI P  A KIQAL+P A +V + +GHCPHD+ P   N AL+ WL ++      AEA  +  A G  
Sbjct:  109 QVAAFIREVVGPSAGPVVLAGNSLGGYVALATAATHGPDMVRAVAMLNGAGPFQEGGPEAAAREAAEWADQSWWARLKRSVAASVKRGVMYFAFLRTKQPERIREVLQLVYVDHSSVDDDLVTSIENPAKDPAASDVFF-LVSHSTRGPPRYVDGLLAKLRVPLLLLWGDKDPWITPARAAKIQALYPSAVKVGLDSGHCPHDDTPAPANEALISWLATLPLPSTSAEAGAEAGAAGAE 346
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BLAST of mRNA_S-ischiensis_contig11.2149.1 vs. uniprot
Match: A0A7S2UMU3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMU3_9STRA)

HSP 1 Score: 199 bits (507), Expect = 9.390e-53
Identity = 109/219 (49.77%), Postives = 145/219 (66.21%), Query Frame = 1 
Query:    1 QVCAFVREVVGGEAVVVGNSLGGYTAL--AAAAHLPEDIKGCVLLNAAGRFSDPEADAKAAEAAAREKTFWDQAVEAVSAALQRAIIIASFYYTKQPLRIKQVLSQVY-IDRRNVDEELVESIRYASLHPNAPEVFYRVIARNGRGPPTT-VNDLLAKLTTPLLLLWGEQDPWIRPTAADKIQALHPPAERVWVQAGHCPHDEAPEEVNGALLGWLKSI 645
            Q   F+ +V+     + GNS+GG+TAL  AA+      I GC+LLNAAG+F DP  +    E         ++ VE++ +A+QRA+I  SF  TKQP RI+QVL QVY I+   VD+ELV+SI+  S  PNA EVFYRVI +N  G P+  V+DLL +L  PLLL WGE DPWIRP AADKIQ L+  ++RV + AGHCPHDE+P++VN A+  ++  I
Sbjct:  157 QAVDFITQVIDKPTTIAGNSIGGFTALYTAASEEAKPFINGCILLNAAGKFKDPTEEIIIEEPK-------NEFVESIMSAIQRAVIAVSFVVTKQPARIEQVLRQVYPINANMVDQELVDSIQLPSQDPNAAEVFYRVIKKNSSGRPSVYVDDLLQRLECPLLLCWGEADPWIRPAAADKIQTLYTNSQRVSIPAGHCPHDESPDQVNSAIRNFINEI 368
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BLAST of mRNA_S-ischiensis_contig11.2149.1 vs. uniprot
Match: A0A5J9UWP1_9POAL (AB hydrolase-1 domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UWP1_9POAL)

HSP 1 Score: 197 bits (500), Expect = 9.820e-52
Identity = 108/216 (50.00%), Postives = 141/216 (65.28%), Query Frame = 1 
Query:    1 QVCAFVREVVGGEAVVVGNSLGGYTALAAAAHLPEDIKGCVLLNAAGRFSDPEADAKAAEAAAREKTFWDQAVEAVSAALQRAIIIASFYYTKQPLRIKQVLSQVYIDRRNVDEELVESIRYASLHPNAPEVFYRVIAR-NGRGPPTTVNDLLAKLTTPLLLLWGEQDPWIRPTAADKIQALHPPAERVWVQAGHCPHDEAPEEVNGALLGWLKSI 645
            QV  F+RE+V   AV+VGNSLGG+T L AA   PE ++G VLLN+AG+FSDP+  A A E A +        V+ +  A+QR ++   F+ +KQP R+++VL  VYID RNVDE LV SI   +  PNA EV+YR+++R        T++ LL KL  PLLLLWG+ DPW+ P  A +IQ  +     V +QAGHCPHDEAPE+ N ALL WL SI
Sbjct:  152 QVSDFLREIVKEPAVLVGNSLGGFTTLFAATEAPELVRGVVLLNSAGQFSDPDKPAPAEEEAEQSNPLAKFIVKPLKEAIQRVVLGFVFWQSKQPARVEKVLKSVYIDPRNVDEYLVGSITAPTADPNAGEVYYRLMSRFMSNQSRYTLDRLLGKLRCPLLLLWGDLDPWVGPAKARRIQEFYADTAVVHLQAGHCPHDEAPEQANAALLEWLASI 367
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHX5_ECTSI3.100e-8067.12Predicted hydrolases or acyltransferases (Alpha/be... [more]
A0A6U1NRJ5_9STRA1.040e-7361.54Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1ZKC8_9STRA7.940e-6255.86Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2S3N1_9STRA1.390e-5754.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2EXP3_TRICV3.700e-5763.28Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A2P6TI17_CHLSO2.070e-5652.27Chloroplastic isoform X2 n=1 Tax=Chlorella sorokin... [more]
B5YNN1_THAPS4.140e-5450.44Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A150G4Y1_GONPE5.350e-5345.61AB hydrolase-1 domain-containing protein n=1 Tax=G... [more]
A0A7S2UMU3_9STRA9.390e-5349.77Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A5J9UWP1_9POAL9.820e-5250.00AB hydrolase-1 domain-containing protein (Fragment... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:1571458..1577499 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score280.8
Seed ortholog evalue5.4e-73
Seed eggNOG ortholog2880.D8LHX5
EggNOG free text desc.regulation of endocannabinoid signaling pathway
EggNOG OGsCOG0596@1,KOG1454@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEpoxide hydrolase-like
Ec32 orthologEc-18_000850.1
Exons6
Model size3191
Cds size654
Stop1
Start0
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815601.7873497-UTR-S-ischiensis_contig11:1571457..15739941622815601.7873497-UTR-S-ischiensis_contig11:1571457..1573994Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1571458..1573994 -
1695739796.4199946-UTR-S-ischiensis_contig11:1571457..15739941695739796.4199946-UTR-S-ischiensis_contig11:1571457..1573994Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 1571458..1573994 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815601.8027618-CDS-S-ischiensis_contig11:1573994..15741111622815601.8027618-CDS-S-ischiensis_contig11:1573994..1574111Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1573995..1574111 -
1695739796.4328291-CDS-S-ischiensis_contig11:1573994..15741111695739796.4328291-CDS-S-ischiensis_contig11:1573994..1574111Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1573995..1574111 -
1622815601.8172636-CDS-S-ischiensis_contig11:1574803..15749471622815601.8172636-CDS-S-ischiensis_contig11:1574803..1574947Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1574804..1574947 -
1695739796.4504132-CDS-S-ischiensis_contig11:1574803..15749471695739796.4504132-CDS-S-ischiensis_contig11:1574803..1574947Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1574804..1574947 -
1622815601.8388538-CDS-S-ischiensis_contig11:1575299..15753801622815601.8388538-CDS-S-ischiensis_contig11:1575299..1575380Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1575300..1575380 -
1695739796.4609592-CDS-S-ischiensis_contig11:1575299..15753801695739796.4609592-CDS-S-ischiensis_contig11:1575299..1575380Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1575300..1575380 -
1622815601.8544505-CDS-S-ischiensis_contig11:1575897..15760171622815601.8544505-CDS-S-ischiensis_contig11:1575897..1576017Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1575898..1576017 -
1695739796.4705527-CDS-S-ischiensis_contig11:1575897..15760171695739796.4705527-CDS-S-ischiensis_contig11:1575897..1576017Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1575898..1576017 -
1622815601.865149-CDS-S-ischiensis_contig11:1576600..15766781622815601.865149-CDS-S-ischiensis_contig11:1576600..1576678Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1576601..1576678 -
1695739796.4872587-CDS-S-ischiensis_contig11:1576600..15766781695739796.4872587-CDS-S-ischiensis_contig11:1576600..1576678Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1576601..1576678 -
1622815601.875124-CDS-S-ischiensis_contig11:1577385..15774991622815601.875124-CDS-S-ischiensis_contig11:1577385..1577499Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1577386..1577499 -
1695739796.4985359-CDS-S-ischiensis_contig11:1577385..15774991695739796.4985359-CDS-S-ischiensis_contig11:1577385..1577499Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1577386..1577499 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2149.1prot_S-ischiensis_contig11.2149.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 1573995..1577499 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2149.1

>prot_S-ischiensis_contig11.2149.1 ID=prot_S-ischiensis_contig11.2149.1|Name=mRNA_S-ischiensis_contig11.2149.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=218bp
QVCAFVREVVGGEAVVVGNSLGGYTALAAAAHLPEDIKGCVLLNAAGRFS
DPEADAKAAEAAAREKTFWDQAVEAVSAALQRAIIIASFYYTKQPLRIKQ
VLSQVYIDRRNVDEELVESIRYASLHPNAPEVFYRVIARNGRGPPTTVND
LLAKLTTPLLLLWGEQDPWIRPTAADKIQALHPPAERVWVQAGHCPHDEA
PEEVNGALLGWLKSIGY*
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mRNA from alignment at S-ischiensis_contig11:1571458..1577499-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2149.1 ID=mRNA_S-ischiensis_contig11.2149.1|Name=mRNA_S-ischiensis_contig11.2149.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6042bp|location=Sequence derived from alignment at S-ischiensis_contig11:1571458..1577499- (Schizocladia ischiensis KU_0333)
CAGGTGTGCGCCTTTGTCCGCGAGGTGGTTGGGGGGGAGGCGGTGGTGGT
GGGCAACAGCCTGGGCGGGTACACCGCCCTGGCCGCCGCGGCCCACCTGC
CAGAGGACATCAAGGTGAGCTGAGAAGAAGCGAGCGGAAAAAAGAGTACT
TCGAAGTACTTCGAAGCAAATACAGGTGTCCCCACTTAACTATTGCGCGA
GTTCCGGCCCCCGACACGGAAGCTCTTCCTGCGCCCGCCTTCAGTGAGCA
GGGCAAAACATATGAGATATGGTGTTTTTAAAACTTTTTTCAGGCTGTCC
TGGGCGGCGATGATCGTTTGTTTTTTTTGCGGAGGCGCGAGGACGGCCTG
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTTTTCGTGAG
GAGGCGTTTGCCTATGCGCTGTGATGTGATGTCATGCCATGTCATGTCAT
GTCATGCCATATCCCAGGGTGAAATTACAGCGAACCACTTCAAGTACCTA
GAGCACGCCACACGTCACATCACGTCACAACAGGGCGCTTCTAAGGAGGC
GTTTGCCCCAAGTATACATTGGCTGCGCATGTATGGCAATAGGTCCAGGT
CTGTATACTCGTATGCTACGCTACCCTTCCATCCAAAGTGTACAAAGCAT
GGGAACGCTTGCTCCGAAGTACTTCAAATCACACAAGCAGTTGAAGCGCT
CACTGCGCGCTTCAGATACCGCCGCAATATACTCTAACCCTGGAGTCGCG
CTCGCCTCTTCCCCGTTGTTGTTGTTTTTACCCCCCGCGGCGCTCCCGAC
GTGGCAACGATGGCAAAAAAGGGGTGCGTCCTGCTGAACGCTGCGGGGAG
GTTCAGCGACCCAGAGGCCGACGCCAAGGCAGCGGAGGCGGCGGCGCGAG
TGAGTGCCATGAACTACTTCCAAGTACGTATCTACTGTGTATATACTACT
TCGAAGTACGTAAGTTTAGTATGTATAGGTCAATGGTCTCGGGACTACGG
CAAGCACCACGTGAGTACATATATGTATATATATAGTACTTCGAAGTACT
CGTAGTGTATGTACTTCGAAATTTGTCCGGCAGGGTGTTTGTGGAAGTGG
CCCGGGGCGTGTGTGGAAGTGGGCTCGCCGGGGGGGGCTTTGAAGTAGCT
TAGGCCCCCCCTGGGGGAGAGAGAAAGCCACACACGCCCCCGGCGAGCCC
ACCCAAGCCCAGCAGCAATGTTTCGGTATGGTGCACGTCATCGCAGCGGC
GGTGGCGGCGGCGACAATTCCAACTACTGTAGAAGTTGCAGCGGTAGCCC
TTCGTTCAGTCGATTGGGTAGAAACCCAATCTTACCAGGAAATGCCCGGT
AAAACCCGCCTTGTGTTCACACAACTCTTGTTAGCTATGTAGAGTACCAC
CGTCCCCTCACCCCACCCGCGCCCGCGGCCCACGGGTCGTGCGCAGCAAA
CGTTCGCTTTTGCCCCCCTTGGTGGCAAGCAGGAGAAAACATTTTGGGAT
CAGGCGGTCGAGGCGGTGTCCGCCGCACTGCAGCGGGCCATAATCATCGC
GTCCTTCTACTACACCAAGCAGCCCCTGCGCATCAAACAGGTCTTGTCTC
AGGTGAGCCAGCGCGGGCGGGGACTCTGCTGGGGGGGGGAAGGGCGGTGG
CGTTGGCGGGGGGAGGGGGAGACGAGGACGGGGAAGGGGGCGCGGGGGAG
GAAGAGAGAGGAGGGGGAGGAGGGGGAGGGGGGCGGGGGGGGGGGGGGGT
GGGGTACGAAGAGCAGGAGGAGGAGAAGGAGGATGGGGTTGGGGAGGGGT
GGCCGACGGGGAGGAGCCGATGCACGGGGGCAGACCCACGCCCAGCCCCA
AGTCGCCGGGTCTGTCTGATTATCCCCGCCTGATTGCCTGCCAGCCTGCA
CGCGTGCCAGCCTTCCTGCCTGCCTACACTCCTGCCGGCCCTCCTGCCTG
CCCTCCTGCCTGCCTGCGTGCCTCGCTTGCCGGGCTCCCCGCCTGTGCAC
CCATAGGCCCTGCTTTGCCCTACCAACCCTCCCGGCTCCCCATGGCCCTA
AATGTCGCTTTCTCCTTGGGCCCCATCCGGCTCATCGTTCCCGCTGTGTG
TGACTGTTCAATCACCCAGGTGTACATAGACCGCCGCAACGTGGATGAGG
AGCTTGTGGAGAGCATTCGCTACGCGTCCCTGCACCCCAATGCCCCGGAG
GTGAGGTGATGTGATGTGATGTCAAATTACAGCAAGTTCGAGTACACTGC
ATGTCACATCAGTGACACTGACGTGATGTGATGTGATGTGACGCTGTTGT
AAGTGGTGATTCGGTATGGTTTTGGCGTGATGCCGTGAAGAAGCGCTCGT
GGAGAAGAACGTTCGCCCCGCTTCCCTGCACCCCAGTCGCCCGAAGGTGC
TGCGATGTTATGTGATGTCATGCTATGTGATCTGATGTGATGTCATGCGA
TGCCGTGTGATGGGATGTGATGGGACGTTACGTCATGTCGTGTGGCCCGT
GAACCCAGCTCGCCCCGGCCCGCCCCCCCCGCGTGTCTTCCTTTCTGCAA
AGGTGTTCTACCGAGTGATTGCACGGAACGGGCGCGGGCCGCCCACCACC
GTGAACGACCTGTTGGCGAAGCTCACGACGCCGCTGCTGCTCCTGTGGGG
CGAGCAGGACCCCTGGATCCGGCCCACGGCCGCCGACAAGATCCAGGTGA
CTCCCTCCCGCCCTCCTCCCTCCACCATTGGAGGGCAGCAATGGGTAGTT
CCGGAAGTTGGAAGATGGTGTGGTTTGGCGTGGGATTGCTTCTTGTGTGC
GTGTGTATTTGTGTGTGTGTGTGGGGGGGCGTGCCTAGTGCAGTGGTCGG
CGCCCGGAGCCGTCTCAGGCGGGCTGGGCTGTTGAGGATCACCGACAGCA
CTATTGTACAGTACGTGTGTGGTGGTCCTTCAAGCACTCGGGGAACTCGC
ACTACCTAGTACTTAGTACTAGAGCAGTACTCGCACGTGTTCCAGCAGTG
CTCGCACTGTACTACCTACTAGTGCTGTACGGGTGCTTGCACCAGTGTTA
CAACAGTACTCTACTCGCACTACTTACTTAGCACTTGAAAGTACTAGAGC
AGTACTCGCACGTGTTCAGCAGTGCTCGCACTGTAGTACAATCGTGTACT
GTACAGCAGTACTTGCACCAGTGTTCCAGTAGTACTGCAGCAGTACTCGT
ACTCGCACTAGTGTTGCCTCGCTTGCCTCATGAGGGAGTTGGCTTGCAAA
CACATTGATTCGTACCTACAGTTCTCCATGTACCCCCCGTCTCCCTCTCA
CTCCCCCTTCTCCCCCTCCCTCTCTTCATCCCTCCCTCTTCTCGGGGCAC
CCCCGGGCGAATCCTCCTCCCTCACCGCGTATTGGCAGGCGTTGCACCCT
CCGGCGGAGCGCGTGTGGGTGCAGGCGGGCCACTGCCCCCACGACGAGGC
GCCCGAGGAGGTGAACGGCGCTCTGCTGGGGTGGCTCAAGTCCATCGGCT
ATTGATTCGACCTTGCAGAGGCGGCGGTACAAGGCTGAGCAACAGGAGTT
CACCTATGTCAGGACTGCAGCACTGTACCCCTGTAGCTACCGTATCGGCT
ATTGATTCGTCCTTTCAGAGGCGGCGGTACAGTACGCTGAGCAACAGGAG
TTACGTCACGACTGCAGCACTGTACCCCTGTACTGCCGCAAGTACAGTAG
TACTTCTACTCGAGTGCAGTAGTGGGTTTCTGGTGAGGCCCTCCCCATTC
GGGGATGGGGCCCGGGACTGTATTTGTTAGTTGCTTAGCCCTTCCGCCCC
GGGTGTATGTACACGGATGTGTATAGGTTTGGTGTGCGTGTACACCCTCC
CGGGGGTGAAAGGGCCAACTGCTTATGTGCGTATCATGTTGATGAGTTAG
CAAAAGTGTTGTACCGGCGTCCTGAGCCTCCAGGGGTTGATCGGCGGCGC
GCAAACCATAGTAGTGTTAGTCGGAGTTTGGCGACTGAACTACTGCTAGT
ACTTGGGTACAGTACTGTAAGTGCTGTACTACACGCACAGCAAGCGGTGT
GCCGTGCCGTCTATGTCCTCTACACTAGGTAACTCAAAAGGGCTAATTGA
TAAGCGCGGCTGTTTTGCCCGAAGGGTCCCTTTGGCGCGATTGTATGTAG
GCTCCGTCGAGTAGGAAGTGCTTATTCGAAGCGCTCACCTCCAGGGCAAG
TGAGTGCCTCCAGGCGGAGCAACGGAAAGGCTCCTGGAGGAAGGAGATTT
GATTTGGCCAGTCGACGCAAGGGTGGCATGGACCACCGCACCTCTCGCTC
CCTCTGTTCTGTGCTACTTCAAAGTACTTGGGGAGCACTTGGAATTGTCA
TGATTCACTGCCACACGGGTATTTGAGTTTCCACCTTGGCATCAATTTGT
GTTCCAAGTTTTGCCACGACGGAGTTGACTCCAAGTTGTCAAGTCGCCTC
GAAGTCGGACTCGGGCACCTGGTGGTATCAAGGTTCCTTTTTCGCATGTA
GGTGTGATAGCACCCTTCCGGTTTTGCTCCGCGGACCAGGTGCTTCAGGT
ACAGCAAGTAGGAAAAGATCGCCTTTAGTAGTTGATGACCGCTGTCGAGG
GCATTGCTTGGCCTGGGTGGCGTGCACCCCCGGGGGGCCCTCCACCTCGC
TGGTTCGGCCTTCTCTGACGCCCTATTGTAGGCGGGGGAGCGCAAGGCCC
TGATCGTCCTTTTTTTGTCGACCTTGGGGCCGTCAGCCGGGCACACGAAC
GGCTGCTACTTGCGGTACGAGTACTCGCTTGTACAGTGTGCCGAACCTCA
CTGCAGTTTGTACAGCTAGCGTGGCGCTGCACGGGCCCGCGGGGGTACAG
TACACGGATTGATTCGCGGAAGATATCTGCACTTGAGCATGACACACCTG
TAAGCACGCGTACTCGAGTGCTCGACCAAGCGTGAGCGCTGCCTCTCCAA
AGCTTTACGACCTCATGAACCCTCGCGAGCCTTCTTTTTTTTTGGCACGA
AACAGACCTGCCGATTACGAATGGAGTCGGGGCTCGGCGGCGGTAGCCCC
GCGTTTTCCGCCCCCCCGGGGCCCGCCGGATGGATTGCCCCGAGTGTGCA
CTGCACCCCCGTCTTCCCCCACGCCTCTCGAGCGTCTCCACTTGGCTTTT
TTTGCTAGGCTTGGGTGCGGGGTGTTTACAGTTCCTGTACTCGAGTAATG
TAGTGTGATTGGATGTGATGCGTACTACTACGAGTACTACAGTAGCACGT
GCTCTGCAGTGGTGTGCTGTACGAGCAATCTGACATATGACACGGCTTGA
CATCACACCACAAAGCATCACGCTTGATGCGATGCGATGCGATGTAGTGT
GCGCGCTAGCATACTGTACTTGTACCGTATGGAACGTAACGTTTTTTAGA
TTTTGAACTGTTTTCCGCGACGATCTCTCCGGAATTACCGATCTTTTCCG
CTGGGATAAACAAACTGTCGGGGGCAGATTGGCCCCAGAATTACGGCATC
AACAAACCCCGTTGCACTCTGGCACCGGAGAATTACCGGGCAAACAACAG
TTTTCTGGCTCAAAAGTGGCGGTTTGTCGTTGAAAGCTTTGGTTGAAGTC
TTTATTAGCCCCAAGTCAGCAGCACAGGTACTTCTTGTCGTCCGCCACGC
TACGGCATGGCCACCTGGTAGCTGGTGTTATCGAACTGGGCAGCCATTCT
TCAGGCTTCGGGGTGTCGAACGCAGTGTGATGAGGGGGCGCGAGCGCGAG
GGCATGGCCAGGATCTCATTTCAACTGGTGCAGCTGCCCTTGAAGCAGGA
AGCTGCGGCTGGGGCCAGCTGCAAATGTGCCAGCTCAGCAAGCCAGCTGA
CGTCCACCGCGTGCTATGTACAGCACGGTCGCCCTCGCTGCCTCCCTCAA
CTGCTGTCGGGGGCCCCTGGGATTGGCGTTCGGCCCCTGGGAATTGCCCC
GTACACTAATTGTTTGCCGCGCCGGGCGGTCGGAATTTCGGCGTAAAGAA
ACTTTTTGGGCCCACGAACCCGCCGGAATTACCGCCGTTTTT
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:1571458..1577499-

>mRNA_S-ischiensis_contig11.2149.1 ID=mRNA_S-ischiensis_contig11.2149.1|Name=mRNA_S-ischiensis_contig11.2149.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1308bp|location=Sequence derived from alignment at S-ischiensis_contig11:1571458..1577499- (Schizocladia ischiensis KU_0333)
CAGGTGTGCGCCTTTGTCCGCGAGGTGGTTGGGGGGGAGGCGGTGGTGGT
GGGCAACAGCCTGGGCGGGTACACCGCCCTGGCCGCCGCGGCCCACCTGC
CAGAGGACATCAAGCAGGTGTGCGCCTTTGTCCGCGAGGTGGTTGGGGGG
GAGGCGGTGGTGGTGGGCAACAGCCTGGGCGGGTACACCGCCCTGGCCGC
CGCGGCCCACCTGCCAGAGGACATCAAGGGGTGCGTCCTGCTGAACGCTG
CGGGGAGGTTCAGCGACCCAGAGGCCGACGCCAAGGCAGCGGAGGCGGCG
GCGCGAGGGTGCGTCCTGCTGAACGCTGCGGGGAGGTTCAGCGACCCAGA
GGCCGACGCCAAGGCAGCGGAGGCGGCGGCGCGAGAGAAAACATTTTGGG
ATCAGGCGGTCGAGGCGGTGTCCGCCGCACTGCAGCGGGCCATAATCATC
GCGTCCTTCTACTACACCAAGCAGCCCCTGCGCATCAAACAGGTCTTGTC
TCAGGAGAAAACATTTTGGGATCAGGCGGTCGAGGCGGTGTCCGCCGCAC
TGCAGCGGGCCATAATCATCGCGTCCTTCTACTACACCAAGCAGCCCCTG
CGCATCAAACAGGTCTTGTCTCAGGTGTACATAGACCGCCGCAACGTGGA
TGAGGAGCTTGTGGAGAGCATTCGCTACGCGTCCCTGCACCCCAATGCCC
CGGAGGTGTACATAGACCGCCGCAACGTGGATGAGGAGCTTGTGGAGAGC
ATTCGCTACGCGTCCCTGCACCCCAATGCCCCGGAGGTGTTCTACCGAGT
GATTGCACGGAACGGGCGCGGGCCGCCCACCACCGTGAACGACCTGTTGG
CGAAGCTCACGACGCCGCTGCTGCTCCTGTGGGGCGAGCAGGACCCCTGG
ATCCGGCCCACGGCCGCCGACAAGATCCAGGTGTTCTACCGAGTGATTGC
ACGGAACGGGCGCGGGCCGCCCACCACCGTGAACGACCTGTTGGCGAAGC
TCACGACGCCGCTGCTGCTCCTGTGGGGCGAGCAGGACCCCTGGATCCGG
CCCACGGCCGCCGACAAGATCCAGGCGTTGCACCCTCCGGCGGAGCGCGT
GTGGGTGCAGGCGGGCCACTGCCCCCACGACGAGGCGCCCGAGGAGGTGA
ACGGCGCTCTGCTGGGGTGGCTCAAGTCCATCGGCTATTGAGCGTTGCAC
CCTCCGGCGGAGCGCGTGTGGGTGCAGGCGGGCCACTGCCCCCACGACGA
GGCGCCCGAGGAGGTGAACGGCGCTCTGCTGGGGTGGCTCAAGTCCATCG
GCTATTGA
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