mRNA_S-ischiensis_contig11.2137.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2137.1 vs. uniprot
Match: A0A836C9Q7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q7_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.700e-37 Identity = 67/89 (75.28%), Postives = 75/89 (84.27%), Query Frame = 1
Query: 1 VKVLQWVRWHPDDIKKVHIADLQTNYTNQGLDLVEMRAVWASMPDEFELDNDGRKKQWANFFRQKLLELAQKEEKGTLSRNEKRSPAWK 267
VKVL WVRWHPDDIKKVHIADLQT Y+NQGLD+VEMRAVWA+MP EF+LD+D +K QW FF QKL EL KE G LSRNE+R+PAWK
Sbjct: 164 VKVLHWVRWHPDDIKKVHIADLQTTYSNQGLDVVEMRAVWAAMPQEFDLDSDAKKAQWRLFFCQKLQELTTKEASGMLSRNERRNPAWK 252
BLAST of mRNA_S-ischiensis_contig11.2137.1 vs. uniprot
Match: A0A7S2SCH3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCH3_9STRA) HSP 1 Score: 101 bits (252), Expect = 2.390e-21 Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 1
Query: 4 KVLQWVRWHPDDIKKVHIADLQTNYTNQGLDLVEMRAVWASMPDEFELDNDGRKKQWANFFRQKLLELAQKEEKGTLSRNEKRSPAWK 267
K+L +R HP DI +H ADL+ Y NQGLD++EMRAVW +P++FE D DG+K +W FRQKL EL KEE+ L+RNEKR+ A+K
Sbjct: 191 KILWMLRMHPLDIALIHQADLRAKYPNQGLDIIEMRAVWTVLPEDFENDGDGKKAEWRFNFRQKLEELTTKEEQNRLARNEKRNNAYK 278
BLAST of mRNA_S-ischiensis_contig11.2137.1 vs. uniprot
Match: A0A7S3K3I4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3I4_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.140e-18 Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 1
Query: 1 VKVLQWVRWHPDDIKKVHIADLQTNYTNQGLDLVEMRAVWASMPDEFELDNDGRKKQWANFFRQKLLELAQKEEKGTLSRNEKRSPAWKGTEEMKLFDPDTPLVRKDRLKSTAFD 345
++ L VR HPDDI K+H ADL Y + GLD++E+RA++A +P F+ D DG+K +W + R KL L +E GTL++NE R+ A+ T FDP + R+ + S A+D
Sbjct: 96 MRALHLVRLHPDDIAKIHAADLTHTYASSGLDIIELRAMYAVLPASFDADPDGKKAKWRDAVRDKLKGLETRESAGTLTKNEIRAGAYANTSGP--FDPHEAVQRRSFVTSQAYD 208
BLAST of mRNA_S-ischiensis_contig11.2137.1 vs. uniprot
Match: A0A7S2HIX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HIX7_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.850e-16 Identity = 43/101 (42.57%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 4 KVLQWVRWHPDDIKKVHIADLQTNYTNQGLDLVEMRAVWASMPDEFELDNDGRKKQWANFFRQKLLELAQKEEKGTLSRNEKRSPAWKGTEEMKLFDPDTP 306
K L +R D IK++HIADL++ Y QGLD+VEMRAV+A++P F+ D DG+K +W N KL ++ +E + L E R A++ ++ LFDP+ P
Sbjct: 3 KALWLIRIGQDSIKRMHIADLRSKYAVQGLDIVEMRAVYANLPTAFDNDGDGKKGEWRNQVISKLKDMTAREAESRLVGMEGRHKAYETVDKQVLFDPEGP 103
BLAST of mRNA_S-ischiensis_contig11.2137.1 vs. uniprot
Match: A0A7S2SK22_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SK22_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 5.550e-16 Identity = 44/94 (46.81%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 4 KVLQWVRWHPDDIKKVHIADLQTNYTNQGLDLVEMRAVWASMPDEFELDNDGRKKQWANFFRQKLLELAQKEEKGTLSRNEKRSPAWKGTEEMK 285
K+LQ++ D I K+HIADL + Y QGLD+ E+RA++A +PDEF+ D DGRKK W + RQKL + +KE++G L+R E+ A++ E+ K
Sbjct: 256 KILQFIYLDKDKIAKIHIADLSSRYVPQGLDIRELRAIYACLPDEFQNDRDGRKKIWLDQARQKLHQFTEKEKQGKLNRAEELHSAYRSAEDNK 349
BLAST of mRNA_S-ischiensis_contig11.2137.1 vs. uniprot
Match: D7FM20_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM20_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 4.390e-15 Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = 1
Query: 4 KVLQWVRWHPDDIKKVHIADLQTNYTNQGLDLVEMRAVWASMPDEFELDNDGRKKQWANFFRQKLLELAQKEEKGTLSRNEKRSPAWKGTEEMKLFDPDTPLVRKDRLKSTAFDATEKPV 363
KVL +R + K H+ +L++ Y LD+VE RA+ A +P FE D DG K W FR++L EL KE G L E R P +K E+ FDPD ++ ++S+AFDA+EKPV
Sbjct: 154 KVLWLIRAPIGMVSKTHVVELKSKYLANDLDVVESRALHACLPSTFENDADGAKTAWRAGFRKRLKELLDKEAAGQLKPAELRRPVYKDIEKGP-FDPDAAAEEQETMRSSAFDASEKPV 272
BLAST of mRNA_S-ischiensis_contig11.2137.1 vs. uniprot
Match: A0A7S2DCZ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCZ3_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 3.700e-14 Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 1
Query: 4 KVLQWVRWHPDDIKKVHIADLQTNYTNQGLDLVEMRAVWASMPDEFELDNDGRKKQWANFFRQKLLELAQKEEKGTLSRNEKRSPAWKGTEEMKLFDPDTPLVRKDRLKSTAFDATEKP 360
+ L VR HPDDI K+HIADL+ Y+ GL+ +E+RA++A+ P EF+ D G K W R +L+E QK +K T N + + A++G+E FD DT R + K+TAF T P
Sbjct: 54 RALTLVRMHPDDIAKIHIADLRGKYSLYGLETMELRAIYANAPSEFQNDGSGEKAAW----RAELIEKVQKLQKETS--NSRMNRAYQGSEAR--FDCDTEPARANVTKTTAFAKTVVP 164
BLAST of mRNA_S-ischiensis_contig11.2137.1 vs. uniprot
Match: A0A7S2DCR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCR7_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.130e-13 Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 1
Query: 4 KVLQWVRWHPDDIKKVHIADLQTNYTNQGLDLVEMRAVWASMPDEFELDNDGRKKQWANFFRQKLLELAQKEEKGTLSRNEKRSPAWKGTEEMKLFDPDTPLVRKDRLKSTAFDATEKP 360
+ L VR HPDDI K+HIADL+ Y+ GL+ +E+RA++A+ P EF+ D G K W R +L+E QK +K T N + + A++G+E FD DT R + K+TAF T P
Sbjct: 353 RALTLVRMHPDDIAKIHIADLRGKYSLYGLETMELRAIYANAPSEFQNDGSGEKAAW----RAELIEKVQKLQKETS--NSRMNRAYQGSEAR--FDCDTEPARANVTKTTAFAKTVVP 463
BLAST of mRNA_S-ischiensis_contig11.2137.1 vs. uniprot
Match: A0A7S2RMF6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMF6_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 3.410e-13 Identity = 47/119 (39.50%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 4 KVLQWVRWHPDDIKKVHIADLQTNYTNQGLDLVEMRAVWASMPDEFELDNDGRKKQWANFFRQKLLELAQKEEKGTLSRNEKRSPAWKGTEEMKLFDPDTPLVRKDRLKSTAFDATEKP 360
K+L W R P I K H ADL+ + QGLDL E+RAV A +P F+ D+ G KK+W F KL E+ Q+EE+ L ++ + + +LFDPD V +K AFD P
Sbjct: 778 KILWWCRSEPSIIAKTHAADLKVKFAFQGLDLRELRAVSAMLPQTFDNDSTGDKKKWRENFMTKLKEMVQQEEQNRLPAAQQIHRTY--ADHPELFDPDAESVLVQTVKGGAFDKVVAP 894
BLAST of mRNA_S-ischiensis_contig11.2137.1 vs. uniprot
Match: A0A6C0L2P5_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0L2P5_9ZZZZ) HSP 1 Score: 76.3 bits (186), Expect = 5.150e-12 Identity = 37/87 (42.53%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 4 KVLQWVRWHPDDIKKVHIADLQTNYTNQGLDLVEMRAVWASMPDEFELDNDGRKKQWANFFRQKLLELAQKEEKGTLSRNEKRSPAW 264
+VL V +P++I +H+ADL+ Y+ GLDL+EMRA++A MP++FE D+ G K QW + R+KL ++ +E+ TL KR+ A+
Sbjct: 205 RVLWLVHMNPNEIAPIHLADLRFKYSFTGLDLIEMRALYACMPEKFEHDDTGEKMQWLSSVREKLSDMINQEKNNTLIARLKRNSAY 291 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2137.1 >prot_S-ischiensis_contig11.2137.1 ID=prot_S-ischiensis_contig11.2137.1|Name=mRNA_S-ischiensis_contig11.2137.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=328bp VKVLQWVRWHPDDIKKVHIADLQTNYTNQGLDLVEMRAVWASMPDEFELDback to top mRNA from alignment at S-ischiensis_contig11:1438093..1441348+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2137.1 ID=mRNA_S-ischiensis_contig11.2137.1|Name=mRNA_S-ischiensis_contig11.2137.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3256bp|location=Sequence derived from alignment at S-ischiensis_contig11:1438093..1441348+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:1438093..1441348+ >mRNA_S-ischiensis_contig11.2137.1 ID=mRNA_S-ischiensis_contig11.2137.1|Name=mRNA_S-ischiensis_contig11.2137.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1968bp|location=Sequence derived from alignment at S-ischiensis_contig11:1438093..1441348+ (Schizocladia ischiensis KU_0333)back to top |