mRNA_S-ischiensis_contig11.2124.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2124.1 vs. uniprot
Match: D8LAV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV9_ECTSI) HSP 1 Score: 139 bits (350), Expect = 1.830e-33 Identity = 97/260 (37.31%), Postives = 112/260 (43.08%), Query Frame = 1
Query: 313 EVGFWRDPRDPHDARPEPQAFVDLGWSRTADQASVLDYLRSGVLESYELGYSFCRFGCRIQRLGKGPQHGADGPAPRLCSGATTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGPPGAXXXXXXAPAAAAVFVEAGCCTLTDGTYSWPEGYAHYVSRHAVRPPEAFVAHALANLEALRRLQPGGRRGQWDPE---RGGVVPLPPGTADFLRDRTTLA*PCCPPRGSSRSVSSPGKMPQLQYVS 1083
+VGFW DPRD D RP+P VD W T + +V Y+RSG LES+ELGYSFCRFGC G G S A T GP G+ GC TLTDG Y WPEG AHY+ HAVRPP+ FV +L NL ALR Q GGR W+ + RG + L PGTA FL+D TTL PP R S G + Q S
Sbjct: 62 DVGFWADPRDSGDKRPDPAQLVDEEWGGTVEAVAVALYVRSGFLESFELGYSFCRFGC----CGDG-------------SAAQTSARDSKRRSWFSAIGGNGGRCGGGAPEQRR----------------GPKGSKFM--------------GCTTLTDGKYVWPEGLAHYIEEHAVRPPDDFVTFSLRNLRALREAQAGGRL-HWEVDERGRGRMARLSPGTAVFLKDNTTLGI-ALPPEPEVRKTPSGGSREEEQRCS 272
BLAST of mRNA_S-ischiensis_contig11.2124.1 vs. uniprot
Match: A0A067CDZ9_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CDZ9_SAPPC) HSP 1 Score: 84.7 bits (208), Expect = 1.510e-15 Identity = 68/237 (28.69%), Postives = 82/237 (34.60%), Query Frame = 1
Query: 313 EVGFW-RDPRDPHDARPEPQAFVDLGW--SRTADQASVLDYLRS-GVLESYELGYSFCRFGCRIQRLGKGPQHGADGPAPRLCSGATTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGPPGAXXXXXXAPAAAAVFVEAGCCTLTDGTYSWPEGYAHYVSRHAVRPPEAFVAHALANLEALRRLQPGGRRGQWDPERGGVVPLPPGTADFLRDRTTLA*P 1011
+VGFW +D DP D RP P+ D W A V+DYLR+ G +ESYE+GYSFCR G D P+ G CT+TDG Y WPEGYAHY+ H VRPP+ V H LA R+ R WD VP+P + TTL P
Sbjct: 4 DVGFWCKDEADPLDGRPHPRTLQDAAWFSENVGLAAIVVDYLRTQGCVESYEMGYSFCRLG--------------DACPPKSM-------------------------------------------------------------------------GACTMTDGVYCWPEGYAHYLDIHCVRPPQELVDHILAQP----RMPRPSRLYLWDHATLERVPMPLAMQSMVLANTTLTLP 149
BLAST of mRNA_S-ischiensis_contig11.2124.1 vs. uniprot
Match: T0Q7W4_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q7W4_SAPDV) HSP 1 Score: 84.7 bits (208), Expect = 1.550e-15 Identity = 70/239 (29.29%), Postives = 85/239 (35.56%), Query Frame = 1
Query: 298 MPPTTEVGFW-RDPRDPHDARPEPQAFVDLGW-SRTAD-QASVLDYLRS-GVLESYELGYSFCRFGCRIQRLGKGPQHGADGPAPRLCSGATTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGPPGAXXXXXXAPAAAAVFVEAGCCTLTDGTYSWPEGYAHYVSRHAVRPPEAFVAHALANLEALRRLQPGGRRGQWDPERGGVVPLPPGTADFLRDRTTL 1002
MP EVGFW +D D D RP P+ + W + AD ASV+DYLR+ G +ESYE+GYSFCR G D P+ G CT+TDG Y WPEGYAHY+ H VRPP+ V H LA L P R WD + +P + TTL
Sbjct: 1 MPALLEVGFWCKDEADLLDGRPHPRTLQEPVWFAANADLAASVVDYLRTQGCVESYEMGYSFCRLG--------------DACPPKSM-------------------------------------------------------------------------GACTMTDGVYCWPEGYAHYLDVHCVRPPQDLVDHILAQPRTL----PPSRLDLWDHATHQRISMPLAMQSMVLANTTL 148
BLAST of mRNA_S-ischiensis_contig11.2124.1 vs. uniprot
Match: A0A485KNH7_9STRA (Aste57867_9691 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNH7_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 8.430e-15 Identity = 66/234 (28.21%), Postives = 80/234 (34.19%), Query Frame = 1
Query: 313 EVGFWR-DPRDPHDARPEPQAFVDLGW--SRTADQASVLDYLR-SGVLESYELGYSFCRFGCRIQRLGKGPQHGADGPAPRLCSGATTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGPPGAXXXXXXAPAAAAVFVEAGCCTLTDGTYSWPEGYAHYVSRHAVRPPEAFVAHALANLEALRRLQPGGRRGQWDPERGGVVPLPPGTADFLRDRTTL 1002
EVGFWR DP D RP PQA D W ++ Y+R +G +ESYE+GYSFCR D P GA CTLTDG Y WPEGYAHY+ +H VRPPE F+AH L+ + P WD V +P + + TTL
Sbjct: 3 EVGFWRKSDADPADLRPHPQALQDKTWYMENKGTARQLIAYVRYAGCVESYEMGYSFCRI---------------DPSCPSKVMGA------------------------------------------------------------------------CTLTDGVYCWPEGYAHYLEQHHVRPPEVFLAHVLSR--PVPSTAPKSGLLMWDFTEKQPVQMPAAMQEMVLANTTL 147
BLAST of mRNA_S-ischiensis_contig11.2124.1 vs. uniprot
Match: A0A1V9YWU9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWU9_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.710e-14 Identity = 67/235 (28.51%), Postives = 80/235 (34.04%), Query Frame = 1
Query: 313 EVGFWRDPR-DPHDARPEPQAFVDLGW--SRTADQASVLDYLRS-GVLESYELGYSFCRFGCRIQRLGKGPQHGADGPAPRLCSGATTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGPPGAXXXXXXAPAAAAVFVEAGCCTLTDGTYSWPEGYAHYVSRHAVRPPEAFVAHALANL-EALRRLQPGGRRGQWDPERGGVVPLPPGTADFLRDRTTL 1002
EVGFWR D D RP P+A D W A V+ YLR+ G +ESYE+GYSFCR G AP+ E G CT+TDG Y WPEGYAHY+ H VRPP+ V H +A R Q WD E VP+P + TT+
Sbjct: 6 EVGFWRQTEGDRLDQRPHPRALQDPSWFAEHPALATRVISYLRTRGCVESYEMGYSFCRLGLDC--------------APK-------------------------------------------------------------------------EMGACTMTDGVYCWPEGYAHYLQAHHVRPPQELVDHICNEPPDAPPRTQ----LWMWDHETNNAVPMPLDMQAMILAHTTI 149
BLAST of mRNA_S-ischiensis_contig11.2124.1 vs. uniprot
Match: A0A835YT98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT98_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.070e-11 Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 820 HYVSRHAVRPPEAFVAHALANLEALRRLQPGGRRGQWDPERGGVVPLPPGTADFLRDRTTL 1002
HYV+RH VRP +AFVAHA NL L+ +Q GG QWD G PLP GTA+F+RD +TL
Sbjct: 3 HYVARHGVRPGDAFVAHACCNLGHLQCMQEGGML-QWDEATGTAAPLPRGTAEFVRDWSTL 62
BLAST of mRNA_S-ischiensis_contig11.2124.1 vs. uniprot
Match: A0A7G6X888_9ACTN (Uncharacterized protein n=1 Tax=Kribbella qitaiheensis TaxID=1544730 RepID=A0A7G6X888_9ACTN) HSP 1 Score: 66.2 bits (160), Expect = 2.160e-9 Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 1
Query: 763 EAGCCTLTDGTYSWPEGYAHYVSRHAVRPPEAFVAHALANLEAL 894
E G L+DGTY WP+G+AHYV H VRPPE F++HAL+ L+AL
Sbjct: 64 ENGSLELSDGTYIWPDGFAHYVLHHDVRPPERFISHALSTLDAL 107
BLAST of mRNA_S-ischiensis_contig11.2124.1 vs. uniprot
Match: A0A1V9Y7G1_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7G1_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.650e-8 Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 313 EVGFWRDPRDPHDARPEPQAFVDLGWSRTADQ--ASVLDYLR-SGVLESYELGYSFCRFG-CRIQRLG 504
EVGFW+ +D HD RP P+ F D W D A V++YL+ G +ESYE+GYSFCR G C + +G
Sbjct: 5 EVGFWQ--KDEHDDRPHPREFQDKAWFIAHDNQAARVIEYLQWGGCVESYEMGYSFCRLGDCSGKEMG 70
BLAST of mRNA_S-ischiensis_contig11.2124.1 vs. uniprot
Match: A0A1S1Q638_9ACTN (Uncharacterized protein n=2 Tax=Frankiaceae TaxID=74712 RepID=A0A1S1Q638_9ACTN) HSP 1 Score: 62.4 bits (150), Expect = 3.750e-8 Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 769 GCCTLTDGTYSWPEGYAHYVSRHAVRPPEAFVAHALANLEAL 894
G L+DGTY WPEG AHYV+ H VRPPE FV+HA A ++A
Sbjct: 66 GSLELSDGTYIWPEGLAHYVADHGVRPPEPFVSHAWAMIDAF 107
BLAST of mRNA_S-ischiensis_contig11.2124.1 vs. uniprot
Match: A0A1V2IHT3_9ACTN (Uncharacterized protein n=1 Tax=Frankia asymbiotica TaxID=1834516 RepID=A0A1V2IHT3_9ACTN) HSP 1 Score: 62.4 bits (150), Expect = 3.750e-8 Identity = 28/54 (51.85%), Postives = 34/54 (62.96%), Query Frame = 1
Query: 769 GCCTLTDGTYSWPEGYAHYVSRHAVRPPEAFVAHALANLEALRRLQPGGRRGQW 930
G L+DGTY WPEG AHY++ H VRPP+ FVAH A ++AL GR W
Sbjct: 66 GSLELSDGTYVWPEGLAHYLTDHGVRPPKPFVAHVWATIDALEAA---GRDESW 116 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2124.1 >prot_S-ischiensis_contig11.2124.1 ID=prot_S-ischiensis_contig11.2124.1|Name=mRNA_S-ischiensis_contig11.2124.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=237bp MPPTTEVGFWRDPRDPHDARPEPQAFVDLGWSRTADQASVLDYLRSGVLEback to top mRNA from alignment at S-ischiensis_contig11:1354191..1356082+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2124.1 ID=mRNA_S-ischiensis_contig11.2124.1|Name=mRNA_S-ischiensis_contig11.2124.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1892bp|location=Sequence derived from alignment at S-ischiensis_contig11:1354191..1356082+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:1354191..1356082+ >mRNA_S-ischiensis_contig11.2124.1 ID=mRNA_S-ischiensis_contig11.2124.1|Name=mRNA_S-ischiensis_contig11.2124.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1422bp|location=Sequence derived from alignment at S-ischiensis_contig11:1354191..1356082+ (Schizocladia ischiensis KU_0333)back to top |