mRNA_S-ischiensis_contig11.2122.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: D7FHX3_ECTSI (RTP1_C1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX3_ECTSI) HSP 1 Score: 191 bits (486), Expect = 7.510e-52 Identity = 146/242 (60.33%), Postives = 164/242 (67.77%), Query Frame = 1
Query: 22 PVPLSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQ------GEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPH-EVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLF 726
P+PLSQRLK+GEAV+ ARRCG AMPKYA FV AFV ARER S G+XXXXXXXXXXXXXXXX G AG A XXXXXXXX Q +E++ER HFRASCLSNLAEVCQLL WSL F+ D+VDLA GVLS E G SEE+TLARRG +FLL RVL AG DVL+++P E++ AYRAL+ AAE DRDEVTR HA GL LD A+R QLF
Sbjct: 1238 PLPLSQRLKIGEAVLLSARRCGDAMPKYAHLFVNAFVVAARER-------SSDGNXXXXXXXXXXXXXXXXXPGGDAGSASLGSAAVNXXXXXXXXXXXXXXXXXXAAQVNQKPSSSSSLESKERYHFRASCLSNLAEVCQLLRWSLGRFSCDVVDLAAGVLSTETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGCLDAAIRGQLF 1472
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A835YW23_9STRA (RTP1_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW23_9STRA) HSP 1 Score: 186 bits (473), Expect = 3.740e-50 Identity = 111/234 (47.44%), Postives = 126/234 (53.85%), Query Frame = 1
Query: 22 PVPLSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQL 723
P+ L+QRLK+GEAVMF ARRCG+A PKYA HFV AFV ARERVG D+GS VE RER HFRASCLSNLAEVC LL WSLRP+A+D+VDLA G L+LE G EEAT RR A+LLSR+L G+D I+P +KP YRALR A D V RFHA AGL +D M QL
Sbjct: 911 PLTLAQRLKVGEAVMFAARRCGEAAPKYAQHFVGAFVVAARERVGG--DSGS-------------------------------------------------------------VETRERIHFRASCLSNLAEVCALLRWSLRPYARDVVDLALGALTLETGAGEEATHVRRASAYLLSRILAGTGSDAATIMPDLIKPVYRALRIVASTVSDGVARFHAKAGLAEIDAIMMQQL 1081
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A6H5JPL2_9PHAE (RTP1_C1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL2_9PHAE) HSP 1 Score: 182 bits (461), Expect = 1.660e-48 Identity = 124/236 (52.54%), Postives = 144/236 (61.02%), Query Frame = 1
Query: 22 PVPLSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPH-EVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLF 726
P+PLSQRLK+GEAV+ ARRCG AMPK+A FV AFV ARER DG XXXXXXXXXX +E++ER HFRASCLSNLAEVCQLL WSL F+ D+VDLA GVLS E G SEE+TLARRG +FLL RVL AG DVL+++P E++ AYRAL+ AA DRDE+TR HA GL +LD A+R QLF
Sbjct: 1220 PLPLSQRLKIGEAVLLSARRCGDAMPKHAHLFVNAFVVAARER---------------------------SSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSS---LESKERCHFRASCLSNLAEVCQLLRWSLGRFSYDVVDLAAGVLSTETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRLAYRALKRAAGSDRDEITRSHARNGLGYLDAAIRGQLF 1425
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A5D6Y2F3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2F3_9STRA) HSP 1 Score: 125 bits (313), Expect = 8.930e-29 Identity = 83/234 (35.47%), Postives = 112/234 (47.86%), Query Frame = 1
Query: 28 PLSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLA-RRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLF 726
PL++R+KL EA++F A+RCG+ +P +A FV A++ R G+ G R GE EE R G G P+ A RASCLSNLAEVC LL W L+PF D++ G+L LE ++ A RRG F+L V+ G VL+++P +++P Y L+ AA D D V FHA L LD MRA+LF
Sbjct: 840 PLARRIKLSEALLFSAKRCGETLPVHAKTFVFAYLDCIRPPAAASARVGASKRFQLIQEIG----------GEREGEREEGDGRVAAAVGPGS-------------DGSDPLA---EATLRASCLSNLAEVCVLLQWGLQPFVADVMTCVFGILQLELDATQRGAAAVRRGAVFVLKYVVQLLGWKVLEVMPEQLRPLYHTLKVAARTDSDAVVVFHATQALEALDHVMRAELF 1047
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A1V9ZHW9_9STRA (RTP1_C1 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZHW9_9STRA) HSP 1 Score: 122 bits (306), Expect = 8.210e-28 Identity = 84/239 (35.15%), Postives = 110/239 (46.03%), Query Frame = 1
Query: 31 LSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLFRPSSSRG 747
+ QR+KL EA+MF ARRCG+ +P YA FV A++ R T T RD VE+ E A FRASCLSNLAEVC LL W++ PF D++ GVL +ERG S+ RRG F+L ++L G +V +I + P YR L+ A D D V+RFHA L LDV MR +LF+ ++ G
Sbjct: 784 IDQRIKLSEALMFAARRCGEVLPAYARGFVYAYLHAIR----TPT-----------------------RD----------------------------------------VESLEDATFRASCLSNLAEVCGLLRWAIHPFLADVLLCVKGVLEVERGRSDAHVALRRGAVFVLHQLLTLMGREVFEIAAEHMTPIYRMLKLVAT-DSDRVSRFHAEQALSELDVLMRGELFQITAQHG 954
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A6A5B0I4_9STRA (RTP1_C1 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B0I4_9STRA) HSP 1 Score: 119 bits (299), Expect = 9.060e-28 Identity = 81/244 (33.20%), Postives = 107/244 (43.85%), Query Frame = 1
Query: 31 LSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLF---RPSSSRGGG 753
+ QR+KL EA++F ARRCG MPKY FV ++ R R +P DA E A RASCLSNLAEVC LLHW++ P+ D+V G+L ER ++ RRG F+L +L G D+L+ +P + P YR L+ A ++D V RFHA + LD MR +LF + SSSR GG
Sbjct: 222 VEQRIKLSEALLFTARRCGDVMPKYGRAFVFGYLRCIRSRT---------------------------------------------LPNDANDI--------------------EEATLRASCLSNLAEVCGLLHWAISPYITDVVGCVRGILETERLATDAHIALRRGAVFVLYNMLQLMGRDILEAVPDAMTPIYRLLKMEASTEKDAVCRFHAENSVKALDTIMRGELFNVGQASSSRPGG 400
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: K3X8E9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8E9_GLOUD) HSP 1 Score: 120 bits (301), Expect = 3.500e-27 Identity = 83/243 (34.16%), Postives = 112/243 (46.09%), Query Frame = 1
Query: 31 LSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLFRPSSSRGGGDG 759
L +R+KL EA++F A+RCG+ +PKYA FV A++ R G T D + E EEA + L VEA RASCLSNLAEVC LL WSL+PF D++ G+L LE +E RRG AFLL ++ G +L+++P ++KP Y L+ D+D V FHA L L+ MR +LF + G G
Sbjct: 827 LEKRIKLSEALLFTAKRCGETLPKYAKVFVYAYLDCIRPPRGQST----------RRTPSKRFQLIQEIDSSEDKEPEEASVETDAGGDNTL------------------VEAT----LRASCLSNLAEVCVLLQWSLQPFLVDVMTCVFGILQLELDATESVVAVRRGAAFLLKYLVQLMGWKMLEVMPDQLKPMYHMLKVVERTDKDSVVVFHARKALEALNDVMRTELFPQRDQQDGAFG 1037
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A397BHA7_9STRA (RTP1_C1 domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BHA7_9STRA) HSP 1 Score: 119 bits (298), Expect = 7.270e-27 Identity = 81/244 (33.20%), Postives = 107/244 (43.85%), Query Frame = 1
Query: 31 LSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLF---RPSSSRGGG 753
+ QR+KL EA++F ARRCG MPKY FV ++ R R +P DA E A RASCLSNLAEVC LLHW++ P+ D+V G+L ER ++ RRG F+L +L G D+L+ +P + P YR L+ A ++D V RFHA + LD MR +LF + SSSR GG
Sbjct: 491 VEQRIKLSEALLFTARRCGDVMPKYGRAFVFGYLRCIRSRK---------------------------------------------LPNDA--------------------NEIEEATLRASCLSNLAEVCGLLHWAISPYITDVVGCVRGILETERLATDAHIALRRGAVFVLYNMLQLMGRDILEAVPDAMTPIYRLLKMEASTEKDAVCRFHAENSVKALDTIMRGELFNVGQASSSRPGG 669
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: W4FL01_9STRA (RTP1_C1 domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FL01_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.920e-26 Identity = 80/244 (32.79%), Postives = 106/244 (43.44%), Query Frame = 1
Query: 31 LSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLF---RPSSSRGGG 753
+ QR+KL EA++F ARRCG MPKY FV ++ R R +P DA E RASCLSNLAEVC LLHW++ P+ D+V G+L ER ++ RRG F+L +L G D+L+ +P + P YR L+ A ++D V RFHA + LD MR +LF + SSSR GG
Sbjct: 777 VEQRIKLSEALLFTARRCGDVMPKYGRAFVFGYLRCIRSRK---------------------------------------------LPNDA--------------------NEIEETTLRASCLSNLAEVCGLLHWAISPYITDVVGCVRGILETERLATDAHIALRRGAVFVLYNMLQLMGRDILEAVPDAMTPIYRLLKMEASTEKDAVCRFHAENSVKALDTIMRGELFNVGQASSSRPGG 955
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A024U9C1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9C1_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.370e-26 Identity = 75/237 (31.65%), Postives = 101/237 (42.62%), Query Frame = 1
Query: 25 VPLSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLFRPS 735
V + QR+K+GEA++F ARRCG MPKY FV ++ R Q ++ E A FRASCLSNLAEVC LL W++ P+ D+V G+L ER ++ RRG F+L +L G D+L+ +P + P YR L+ A + D V RFHA G+ LD MR +LF S
Sbjct: 768 VSIEQRIKVGEALVFTARRCGAMMPKYGRAFVHGYLGCIRRH----------------------------------------------------------------PQATKMQDSLEEATFRASCLSNLAEVCGLLQWAIHPYITDVVACVRGILDTERLTTDAHIALRRGAVFVLYHMLQLFGRDILEAIPDAMTPIYRLLKHEAASETDPVCRFHAENGVKELDTIMRGELFHLS 940 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2122.1 >prot_S-ischiensis_contig11.2122.1 ID=prot_S-ischiensis_contig11.2122.1|Name=mRNA_S-ischiensis_contig11.2122.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=262bp PGEQHQQPVPLSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERback to top mRNA from alignment at S-ischiensis_contig11:1331478..1333280+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2122.1 ID=mRNA_S-ischiensis_contig11.2122.1|Name=mRNA_S-ischiensis_contig11.2122.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1803bp|location=Sequence derived from alignment at S-ischiensis_contig11:1331478..1333280+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:1331478..1333280+ >mRNA_S-ischiensis_contig11.2122.1 ID=mRNA_S-ischiensis_contig11.2122.1|Name=mRNA_S-ischiensis_contig11.2122.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1572bp|location=Sequence derived from alignment at S-ischiensis_contig11:1331478..1333280+ (Schizocladia ischiensis KU_0333)back to top |