mRNA_S-ischiensis_contig11.2122.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2122.1
Unique NamemRNA_S-ischiensis_contig11.2122.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: D7FHX3_ECTSI (RTP1_C1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX3_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 7.510e-52
Identity = 146/242 (60.33%), Postives = 164/242 (67.77%), Query Frame = 1
Query:   22 PVPLSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQ------GEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPH-EVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLF 726
            P+PLSQRLK+GEAV+  ARRCG AMPKYA  FV AFV  ARER        S G+XXXXXXXXXXXXXXXX  G  AG      A             XXXXXXXX  Q          +E++ER HFRASCLSNLAEVCQLL WSL  F+ D+VDLA GVLS E G SEE+TLARRG +FLL RVL  AG DVL+++P  E++ AYRAL+ AAE DRDEVTR HA  GL  LD A+R QLF
Sbjct: 1238 PLPLSQRLKIGEAVLLSARRCGDAMPKYAHLFVNAFVVAARER-------SSDGNXXXXXXXXXXXXXXXXXPGGDAGSASLGSAAVNXXXXXXXXXXXXXXXXXXAAQVNQKPSSSSSLESKERYHFRASCLSNLAEVCQLLRWSLGRFSCDVVDLAAGVLSTETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGCLDAAIRGQLF 1472          
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A835YW23_9STRA (RTP1_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW23_9STRA)

HSP 1 Score: 186 bits (473), Expect = 3.740e-50
Identity = 111/234 (47.44%), Postives = 126/234 (53.85%), Query Frame = 1
Query:   22 PVPLSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQL 723
            P+ L+QRLK+GEAVMF ARRCG+A PKYA HFV AFV  ARERVG   D+GS                                                             VE RER HFRASCLSNLAEVC LL WSLRP+A+D+VDLA G L+LE G  EEAT  RR  A+LLSR+L   G+D   I+P  +KP YRALR  A    D V RFHA AGL  +D  M  QL
Sbjct:  911 PLTLAQRLKVGEAVMFAARRCGEAAPKYAQHFVGAFVVAARERVGG--DSGS-------------------------------------------------------------VETRERIHFRASCLSNLAEVCALLRWSLRPYARDVVDLALGALTLETGAGEEATHVRRASAYLLSRILAGTGSDAATIMPDLIKPVYRALRIVASTVSDGVARFHAKAGLAEIDAIMMQQL 1081          
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A6H5JPL2_9PHAE (RTP1_C1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL2_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 1.660e-48
Identity = 124/236 (52.54%), Postives = 144/236 (61.02%), Query Frame = 1
Query:   22 PVPLSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPH-EVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLF 726
            P+PLSQRLK+GEAV+  ARRCG AMPK+A  FV AFV  ARER                             DG                        XXXXXXXXXX     +E++ER HFRASCLSNLAEVCQLL WSL  F+ D+VDLA GVLS E G SEE+TLARRG +FLL RVL  AG DVL+++P  E++ AYRAL+ AA  DRDE+TR HA  GL +LD A+R QLF
Sbjct: 1220 PLPLSQRLKIGEAVLLSARRCGDAMPKHAHLFVNAFVVAARER---------------------------SSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSS---LESKERCHFRASCLSNLAEVCQLLRWSLGRFSYDVVDLAAGVLSTETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRLAYRALKRAAGSDRDEITRSHARNGLGYLDAAIRGQLF 1425          
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A5D6Y2F3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2F3_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.930e-29
Identity = 83/234 (35.47%), Postives = 112/234 (47.86%), Query Frame = 1
Query:   28 PLSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLA-RRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLF 726
            PL++R+KL EA++F A+RCG+ +P +A  FV A++   R         G+                     G R GE EE   R     G                 G  P+     A  RASCLSNLAEVC LL W L+PF  D++    G+L LE   ++    A RRG  F+L  V+   G  VL+++P +++P Y  L+ AA  D D V  FHA   L  LD  MRA+LF
Sbjct:  840 PLARRIKLSEALLFSAKRCGETLPVHAKTFVFAYLDCIRPPAAASARVGASKRFQLIQEIG----------GEREGEREEGDGRVAAAVGPGS-------------DGSDPLA---EATLRASCLSNLAEVCVLLQWGLQPFVADVMTCVFGILQLELDATQRGAAAVRRGAVFVLKYVVQLLGWKVLEVMPEQLRPLYHTLKVAARTDSDAVVVFHATQALEALDHVMRAELF 1047          
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A1V9ZHW9_9STRA (RTP1_C1 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZHW9_9STRA)

HSP 1 Score: 122 bits (306), Expect = 8.210e-28
Identity = 84/239 (35.15%), Postives = 110/239 (46.03%), Query Frame = 1
Query:   31 LSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLFRPSSSRG 747
            + QR+KL EA+MF ARRCG+ +P YA  FV A++   R    T T                       RD                                        VE+ E A FRASCLSNLAEVC LL W++ PF  D++    GVL +ERG S+     RRG  F+L ++L   G +V +I    + P YR L+  A  D D V+RFHA   L  LDV MR +LF+ ++  G
Sbjct:  784 IDQRIKLSEALMFAARRCGEVLPAYARGFVYAYLHAIR----TPT-----------------------RD----------------------------------------VESLEDATFRASCLSNLAEVCGLLRWAIHPFLADVLLCVKGVLEVERGRSDAHVALRRGAVFVLHQLLTLMGREVFEIAAEHMTPIYRMLKLVAT-DSDRVSRFHAEQALSELDVLMRGELFQITAQHG 954          
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A6A5B0I4_9STRA (RTP1_C1 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B0I4_9STRA)

HSP 1 Score: 119 bits (299), Expect = 9.060e-28
Identity = 81/244 (33.20%), Postives = 107/244 (43.85%), Query Frame = 1
Query:   31 LSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLF---RPSSSRGGG 753
            + QR+KL EA++F ARRCG  MPKY   FV  ++   R R                                              +P DA                       E A  RASCLSNLAEVC LLHW++ P+  D+V    G+L  ER  ++     RRG  F+L  +L   G D+L+ +P  + P YR L+  A  ++D V RFHA   +  LD  MR +LF   + SSSR GG
Sbjct:  222 VEQRIKLSEALLFTARRCGDVMPKYGRAFVFGYLRCIRSRT---------------------------------------------LPNDANDI--------------------EEATLRASCLSNLAEVCGLLHWAISPYITDVVGCVRGILETERLATDAHIALRRGAVFVLYNMLQLMGRDILEAVPDAMTPIYRLLKMEASTEKDAVCRFHAENSVKALDTIMRGELFNVGQASSSRPGG 400          
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: K3X8E9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8E9_GLOUD)

HSP 1 Score: 120 bits (301), Expect = 3.500e-27
Identity = 83/243 (34.16%), Postives = 112/243 (46.09%), Query Frame = 1
Query:   31 LSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLFRPSSSRGGGDG 759
            L +R+KL EA++F A+RCG+ +PKYA  FV A++   R   G  T                        D +   E EEA         + L                  VEA      RASCLSNLAEVC LL WSL+PF  D++    G+L LE   +E     RRG AFLL  ++   G  +L+++P ++KP Y  L+     D+D V  FHA   L  L+  MR +LF     + G  G
Sbjct:  827 LEKRIKLSEALLFTAKRCGETLPKYAKVFVYAYLDCIRPPRGQST----------RRTPSKRFQLIQEIDSSEDKEPEEASVETDAGGDNTL------------------VEAT----LRASCLSNLAEVCVLLQWSLQPFLVDVMTCVFGILQLELDATESVVAVRRGAAFLLKYLVQLMGWKMLEVMPDQLKPMYHMLKVVERTDKDSVVVFHARKALEALNDVMRTELFPQRDQQDGAFG 1037          
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A397BHA7_9STRA (RTP1_C1 domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BHA7_9STRA)

HSP 1 Score: 119 bits (298), Expect = 7.270e-27
Identity = 81/244 (33.20%), Postives = 107/244 (43.85%), Query Frame = 1
Query:   31 LSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLF---RPSSSRGGG 753
            + QR+KL EA++F ARRCG  MPKY   FV  ++   R R                                              +P DA                       E A  RASCLSNLAEVC LLHW++ P+  D+V    G+L  ER  ++     RRG  F+L  +L   G D+L+ +P  + P YR L+  A  ++D V RFHA   +  LD  MR +LF   + SSSR GG
Sbjct:  491 VEQRIKLSEALLFTARRCGDVMPKYGRAFVFGYLRCIRSRK---------------------------------------------LPNDA--------------------NEIEEATLRASCLSNLAEVCGLLHWAISPYITDVVGCVRGILETERLATDAHIALRRGAVFVLYNMLQLMGRDILEAVPDAMTPIYRLLKMEASTEKDAVCRFHAENSVKALDTIMRGELFNVGQASSSRPGG 669          
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: W4FL01_9STRA (RTP1_C1 domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FL01_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.920e-26
Identity = 80/244 (32.79%), Postives = 106/244 (43.44%), Query Frame = 1
Query:   31 LSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLF---RPSSSRGGG 753
            + QR+KL EA++F ARRCG  MPKY   FV  ++   R R                                              +P DA                       E    RASCLSNLAEVC LLHW++ P+  D+V    G+L  ER  ++     RRG  F+L  +L   G D+L+ +P  + P YR L+  A  ++D V RFHA   +  LD  MR +LF   + SSSR GG
Sbjct:  777 VEQRIKLSEALLFTARRCGDVMPKYGRAFVFGYLRCIRSRK---------------------------------------------LPNDA--------------------NEIEETTLRASCLSNLAEVCGLLHWAISPYITDVVGCVRGILETERLATDAHIALRRGAVFVLYNMLQLMGRDILEAVPDAMTPIYRLLKMEASTEKDAVCRFHAENSVKALDTIMRGELFNVGQASSSRPGG 955          
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Match: A0A024U9C1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9C1_9STRA)

HSP 1 Score: 117 bits (292), Expect = 5.370e-26
Identity = 75/237 (31.65%), Postives = 101/237 (42.62%), Query Frame = 1
Query:   25 VPLSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARERVGTETDAGSGGDXXXXXXXXXXXXXXXXRDGTRAGEVEEAGARGGGVPGDALPAPXXXXXXXXXXQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRPFAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILPHEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLFRPS 735
            V + QR+K+GEA++F ARRCG  MPKY   FV  ++   R                                                                   Q     ++ E A FRASCLSNLAEVC LL W++ P+  D+V    G+L  ER  ++     RRG  F+L  +L   G D+L+ +P  + P YR L+  A  + D V RFHA  G+  LD  MR +LF  S
Sbjct:  768 VSIEQRIKVGEALVFTARRCGAMMPKYGRAFVHGYLGCIRRH----------------------------------------------------------------PQATKMQDSLEEATFRASCLSNLAEVCGLLQWAIHPYITDVVACVRGILDTERLTTDAHIALRRGAVFVLYHMLQLFGRDILEAIPDAMTPIYRLLKHEAASETDPVCRFHAENGVKELDTIMRGELFHLS 940          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHX3_ECTSI7.510e-5260.33RTP1_C1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YW23_9STRA3.740e-5047.44RTP1_C1 domain-containing protein n=1 Tax=Tribonem... [more]
A0A6H5JPL2_9PHAE1.660e-4852.54RTP1_C1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A5D6Y2F3_9STRA8.930e-2935.47Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1V9ZHW9_9STRA8.210e-2835.15RTP1_C1 domain-containing protein n=1 Tax=Achlya h... [more]
A0A6A5B0I4_9STRA9.060e-2833.20RTP1_C1 domain-containing protein n=2 Tax=Aphanomy... [more]
K3X8E9_GLOUD3.500e-2734.16Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A397BHA7_9STRA7.270e-2733.20RTP1_C1 domain-containing protein n=6 Tax=Aphanomy... [more]
W4FL01_9STRA2.920e-2632.79RTP1_C1 domain-containing protein n=3 Tax=Aphanomy... [more]
A0A024U9C1_9STRA5.370e-2631.65Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:1331478..1333280 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score194.1
Seed ortholog evalue8e-47
Seed eggNOG ortholog2880.D7FHX3
Preferred nameTANGO6
KEGG rclassRC00961
KEGG koko:K01763,ko:K08489
KEGG ReactionR03599
KEGG Pathwayko00450,ko01100,ko04130,map00450,map01100,map04130
GOsGO:0002790,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0006606,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007030,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0010256,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0017038,GO:0032940,GO:0033036,GO:0033365,GO:0034504,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594
EggNOG free text desc.protein transport
EggNOG OGsKOG4653@1,KOG4653@2759
EC4.4.1.16
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Hectar predicted targeting categoryother localisation
Exons3
Model size786
Cds size786
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2122.1prot_S-ischiensis_contig11.2122.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 1331478..1333280 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815599.177735-CDS-S-ischiensis_contig11:1331477..13319361622815599.177735-CDS-S-ischiensis_contig11:1331477..1331936Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1331478..1331936 +
1695739794.805998-CDS-S-ischiensis_contig11:1331477..13319361695739794.805998-CDS-S-ischiensis_contig11:1331477..1331936Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1331478..1331936 +
1622815599.190144-CDS-S-ischiensis_contig11:1332495..13326271622815599.190144-CDS-S-ischiensis_contig11:1332495..1332627Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1332496..1332627 +
1695739794.8186333-CDS-S-ischiensis_contig11:1332495..13326271695739794.8186333-CDS-S-ischiensis_contig11:1332495..1332627Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1332496..1332627 +
1622815599.2000182-CDS-S-ischiensis_contig11:1333085..13332801622815599.2000182-CDS-S-ischiensis_contig11:1333085..1333280Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1333086..1333280 +
1695739794.8271177-CDS-S-ischiensis_contig11:1333085..13332801695739794.8271177-CDS-S-ischiensis_contig11:1333085..1333280Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 1333086..1333280 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2122.1

>prot_S-ischiensis_contig11.2122.1 ID=prot_S-ischiensis_contig11.2122.1|Name=mRNA_S-ischiensis_contig11.2122.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=262bp
PGEQHQQPVPLSQRLKLGEAVMFVARRCGQAMPKYAAHFVQAFVAGARER
VGTETDAGSGGDGGGERGGAASSSGGDDRDGTRAGEVEEAGARGGGVPGD
ALPAPPPMLPPPPPPQGEPPVEARERAHFRASCLSNLAEVCQLLHWSLRP
FAQDIVDLATGVLSLERGDSEEATLARRGGAFLLSRVLGAAGTDVLQILP
HEVKPAYRALRTAAERDRDEVTRFHACAGLVHLDVAMRAQLFRPSSSRGG
GDGEIRGPWGPG
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mRNA from alignment at S-ischiensis_contig11:1331478..1333280+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2122.1 ID=mRNA_S-ischiensis_contig11.2122.1|Name=mRNA_S-ischiensis_contig11.2122.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1803bp|location=Sequence derived from alignment at S-ischiensis_contig11:1331478..1333280+ (Schizocladia ischiensis KU_0333)
CCGGGGGAGCAGCACCAGCAGCCTGTCCCCCTCTCCCAGCGCCTGAAGCT GGGCGAGGCGGTCATGTTTGTGGCGCGGCGGTGCGGCCAGGCCATGCCCA AGTACGCGGCCCACTTTGTGCAGGCGTTTGTGGCCGGCGCGCGCGAGAGG GTGGGCACTGAAACCGACGCTGGCAGTGGCGGCGACGGCGGCGGCGAGCG GGGGGGCGCTGCGTCATCATCAGGCGGGGACGACCGAGATGGCACTCGCG CCGGGGAGGTGGAGGAGGCAGGGGCACGGGGCGGTGGCGTGCCCGGCGAT GCGCTGCCAGCGCCGCCGCCGATGCTGCCGCCGCCGCCACCCCCGCAAGG GGAGCCGCCTGTGGAGGCGAGGGAGCGCGCGCACTTCCGCGCCAGCTGCC TGTCCAACCTGGCCGAGGTTTGCCAGCTCTTGCACTGGTCTCTGCGCCCT TTTGCCCAGGTGATTCATATATGTTGTGACGAGATTCATATAGATTGCAA TGAGGTACAATCTCAAGTGTGTGAGCTTGAGTGTTATCGTATTAGTATTT GTCCCATTTAAGAGTTTAGTGTTCTCATATTAGTGATCCTTTTGCCCAGG TATTTGGCGGTGGTGGCGGCAGCTGTGGCTGTGGGGGAGCGCGGTGCGGG GGCTGGGAGGGAGGGGCGAGAGAGACACGGTGGTGTTTTAATGAGAGGGG CGGGGCCCGCAGCCGTTGGGGACGAAGTGGATGGACTCTGTGCTGTGTGG GTAAGGAGCTACTTGGAAGCGCATTGCGTACTTGCATACAGTACCAACCG GGTGGAAGTGTGCACTTTGGACGAACTGTGGCCCAGAAATGTTTTCCGAG TTCACTGAGCCACGTTCAGTTCGTCTGCGCACCATCCTCAACTATAGAGT GCTGTAGATCCATACTGCCTATACCCACGTTACTTGCCGCGTGACCGACT GGGCCTCGTGACCGACACGCGCCGCACGGTAACCAACGCGTCTCTCTCTC TCGCGCGCGCGGTTTCAGGACATTGTGGACCTGGCCACGGGGGTGCTGTC CCTGGAACGGGGCGACTCCGAGGAAGCCACCCTGGCCCGGAGGGGTGGCG CCTTTCTGCTGTCCAGGGTGCTGGGGGCCGCGGGCACCGACGTGCTGCAG GTGGGGCATCATTTTAACCCTTTGCCCCTGCTTAATTGGACATACGCACG AAAACCCTATGATTACACGGACCCCAGGGGTAGAAGGGTTCAAAGTTTTT TCCCCCCGCCTCTCGCCGCCGACGCGCGCGGTACGATTGCCTCCCCGAGA AACAGACAAGCTTACGACCTTTGCTCCGTCGCATGGGGTCTCCTCCTCTG TAGGAACGGATGCCCCGGCGGCCAACTTTCACAAGGCTTGTCTACTACGG CAAGCGACAACTGTACCTAGCTCATGAGCGCCCCGACTCCCCGCCGCCGC CGCCCAAACCTACTATAGTGCCCCTAATGTACCTCTGGCCTGTGATTCAC ATAAATTGTAGTGAGGTACAATCGCACGTGTGTGAGATTGACTGTTCTCG TATTAGTAGTAGTTGTCCCATTTAGGAATTTGACCGTTCTGCCTGCATGC CGCCGCAGATCCTACCGCACGAGGTCAAGCCCGCGTACCGCGCCCTCCGC ACGGCCGCCGAACGCGACCGGGACGAGGTCACGCGCTTCCACGCCTGCGC CGGCCTGGTGCACCTAGACGTGGCCATGAGGGCGCAGCTCTTCCGCCCAA GCAGCAGCCGCGGTGGCGGCGACGGCGAGATTAGGGGCCCCTGGGGCCCC GGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:1331478..1333280+

>mRNA_S-ischiensis_contig11.2122.1 ID=mRNA_S-ischiensis_contig11.2122.1|Name=mRNA_S-ischiensis_contig11.2122.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1572bp|location=Sequence derived from alignment at S-ischiensis_contig11:1331478..1333280+ (Schizocladia ischiensis KU_0333)
CCGGGGGAGCAGCACCAGCAGCCTGTCCCCCTCTCCCAGCGCCTGAAGCT
GGGCGAGGCGGTCATGTTTGTGGCGCGGCGGTGCGGCCAGGCCATGCCCA
AGTACGCGGCCCACTTTGTGCAGGCGTTTGTGGCCGGCGCGCGCGAGAGG
GTGGGCACTGAAACCGACGCTGGCAGTGGCGGCGACGGCGGCGGCGAGCG
GGGGGGCGCTGCGTCATCATCAGGCGGGGACGACCGAGATGGCACTCGCG
CCGGGGAGGTGGAGGAGGCAGGGGCACGGGGCGGTGGCGTGCCCGGCGAT
GCGCTGCCAGCGCCGCCGCCGATGCTGCCGCCGCCGCCACCCCCGCAAGG
GGAGCCGCCTGTGGAGGCGAGGGAGCGCGCGCACTTCCGCGCCAGCTGCC
TGTCCAACCTGGCCGAGGTTTGCCAGCTCTTGCACTGGTCTCTGCGCCCT
TTTGCCCAGCCGGGGGAGCAGCACCAGCAGCCTGTCCCCCTCTCCCAGCG
CCTGAAGCTGGGCGAGGCGGTCATGTTTGTGGCGCGGCGGTGCGGCCAGG
CCATGCCCAAGTACGCGGCCCACTTTGTGCAGGCGTTTGTGGCCGGCGCG
CGCGAGAGGGTGGGCACTGAAACCGACGCTGGCAGTGGCGGCGACGGCGG
CGGCGAGCGGGGGGGCGCTGCGTCATCATCAGGCGGGGACGACCGAGATG
GCACTCGCGCCGGGGAGGTGGAGGAGGCAGGGGCACGGGGCGGTGGCGTG
CCCGGCGATGCGCTGCCAGCGCCGCCGCCGATGCTGCCGCCGCCGCCACC
CCCGCAAGGGGAGCCGCCTGTGGAGGCGAGGGAGCGCGCGCACTTCCGCG
CCAGCTGCCTGTCCAACCTGGCCGAGGTTTGCCAGCTCTTGCACTGGTCT
CTGCGCCCTTTTGCCCAGGACATTGTGGACCTGGCCACGGGGGTGCTGTC
CCTGGAACGGGGCGACTCCGAGGAAGCCACCCTGGCCCGGAGGGGTGGCG
CCTTTCTGCTGTCCAGGGTGCTGGGGGCCGCGGGCACCGACGTGCTGCAG
GACATTGTGGACCTGGCCACGGGGGTGCTGTCCCTGGAACGGGGCGACTC
CGAGGAAGCCACCCTGGCCCGGAGGGGTGGCGCCTTTCTGCTGTCCAGGG
TGCTGGGGGCCGCGGGCACCGACGTGCTGCAGATCCTACCGCACGAGGTC
AAGCCCGCGTACCGCGCCCTCCGCACGGCCGCCGAACGCGACCGGGACGA
GGTCACGCGCTTCCACGCCTGCGCCGGCCTGGTGCACCTAGACGTGGCCA
TGAGGGCGCAGCTCTTCCGCCCAAGCAGCAGCCGCGGTGGCGGCGACGGC
GAGATTAGGGGCCCCTGGGGCCCCGGGATCCTACCGCACGAGGTCAAGCC
CGCGTACCGCGCCCTCCGCACGGCCGCCGAACGCGACCGGGACGAGGTCA
CGCGCTTCCACGCCTGCGCCGGCCTGGTGCACCTAGACGTGGCCATGAGG
GCGCAGCTCTTCCGCCCAAGCAGCAGCCGCGGTGGCGGCGACGGCGAGAT
TAGGGGCCCCTGGGGCCCCGGG
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