mRNA_S-ischiensis_contig11.2102.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2102.1 vs. uniprot
Match: D7FSB4_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSB4_ECTSI) HSP 1 Score: 198 bits (504), Expect = 8.480e-57 Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 4 TGGDGVPRAVCYTCAIERPLRSKHCRTCRRCVRAFDHHCPFVGNCVGRSNYRWFYLYVLLFTISCLLYMWLCLVWWWNLGFDLVAVGSGAYVLFFTLFGLGLLLYHTQIVRNNLTTNEHMNWHRYSYLRHPDGSGRFFNPFDRGCFQNFLARFAAVHDQALPGALA 501
+G V + CYTCAIERPLRS+HCR CRRCVRAFDHHCPFVGNCVG NYRWF+LYV+ S + Y +C+ W W++G V SG+Y F FG+ L +YH Q++R NLTT+EH R YL P+ SG++ NPFD+GC N +ARF+ HD PG +A
Sbjct: 526 SGAGSVSSSACYTCAIERPLRSRHCRNCRRCVRAFDHHCPFVGNCVGAGNYRWFFLYVIFLVASTVSYTIMCVDWMWHIGLSWAVVVSGSYSFLFAGFGILLFMYHAQLIRQNLTTSEHHMMGRVDYLLAPNYSGQYHNPFDQGCMANCVARFSGTHDTPPPGLVA 691
BLAST of mRNA_S-ischiensis_contig11.2102.1 vs. uniprot
Match: A0A836CCL2_9STRA (Spc98 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCL2_9STRA) HSP 1 Score: 182 bits (462), Expect = 4.720e-50 Identity = 84/164 (51.22%), Postives = 112/164 (68.29%), Query Frame = 1
Query: 7 GGDGVPRA-VCYTCAIERPLRSKHCRTCRRCVRAFDHHCPFVGNCVGRSNYRWFYLYVLLFTISCLLYMWLCLVWWWNLGFDLVAVGSGAYVLFFTLFGLGLLLYHTQIVRNNLTTNEHMNWHRYSYLRHPDGSGRFFNPFDRGCF-QNFLARFAAVHDQALPG 492
G +G+P +CYTC++ERP+R+KHCR CRRCVR FDHHC FV NC+G NY +FYLY++ F + + ++ +W W LGFD + S Y + + + G+GL+ YHTQ++ NLTTNEH NWHRY+YLR D +GRF NPF RG F NFL+R + PG
Sbjct: 1557 GPEGLPTGPLCYTCSLERPIRAKHCRVCRRCVRCFDHHCAFVRNCIGLRNYSYFYLYLVFFLAATVTHVTAGALWLWRLGFDWLVAVSTVYTILYVVMGIGLVQYHTQLISRNLTTNEHQNWHRYAYLR--DHAGRFSNPFSRGGFVANFLSRIVYMDSDKRPG 1718
BLAST of mRNA_S-ischiensis_contig11.2102.1 vs. uniprot
Match: A0A7S3JUV6_9STRA (Palmitoyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUV6_9STRA) HSP 1 Score: 160 bits (404), Expect = 5.940e-43 Identity = 73/144 (50.69%), Postives = 102/144 (70.83%), Query Frame = 1
Query: 31 VCYTCAIERPLRSKHCRTCRRCVRAFDHHCPFVGNCVGRSNYRWFYLYVLLFTISCLLYMWLCLVWWWNLGFDLVAVGSGAYVLFFTLFGLGLLLYHTQIVRNNLTTNEHMNWHRYSYLRHPDGSGRFFNPFDRGCFQNFLARF 462
+C++C I+RPLR+KHCR R+CV AFDH+CP+VGN VG NYR+FY Y L FT+S L + ++ ++ + G D + + +V F LFGL +++YHTQ+V NNLTTNEH+N HRY YL P+ +FFNP+D+G N + RF
Sbjct: 419 LCHSCHIQRPLRAKHCRVRRKCVMAFDHYCPYVGNAVGLYNYRFFYGYCLFFTLSALQWQYVATIYLYYHGTDYSLLSAMGWVALFILFGLAMVIYHTQLVYNNLTTNEHLNVHRYDYLHDPNNPLKFFNPYDKGFCSNLIDRF 562
BLAST of mRNA_S-ischiensis_contig11.2102.1 vs. uniprot
Match: A0A7S1UAK2_9STRA (Palmitoyltransferase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAK2_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.900e-38 Identity = 76/153 (49.67%), Postives = 99/153 (64.71%), Query Frame = 1
Query: 1 LTGGDGVPRAVCYTCAIERPLRSKHCRTCRRCVRAFDHHCPFVGNCVGRSNYRWFYLYVLLFTISCLLYMWLCLVWWWNLGFDLVAVGSGAYVLFFTLFGLGLLLYHTQIVRNNLTTNEHMNWHRYSYLRHPDGSGRFFNPFDRGCFQNFLAR 459
L GD +C+TC I RPLRSKHCR R+CVR FDH+CPFV N VG+ NYR+F+LY++ F I+ ++WLC+V W G+ V + Y L F L LG+ +YH Q+V NLTTNEH N RY YL+ D +G F NP+D+G N + R
Sbjct: 377 LANGDSKVN-LCHTCHIVRPLRSKHCRVSRKCVRDFDHYCPFVQNTVGQGNYRYFFLYLVTFQIAIDAFLWLCMVKLWRDGWGWVVGLTLIYFLPFWLMNLGMCVYHAQLVYGNLTTNEHSNRWRYGYLQ--DAAGGFHNPYDKGFLANVVDR 526
BLAST of mRNA_S-ischiensis_contig11.2102.1 vs. uniprot
Match: A0A7S4DBI5_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBI5_HETAK) HSP 1 Score: 142 bits (357), Expect = 3.830e-37 Identity = 67/145 (46.21%), Postives = 100/145 (68.97%), Query Frame = 1
Query: 25 RAVCYTCAIERPLRSKHCRTCRRCVRAFDHHCPFVGNCVGRSNYRWFYLYVLLFTISCLLYMWLCLVWWWNLGFDLVAVGSGAYVLFFTLFGLGLLLYHTQIVRNNLTTNEHMNWHRYSYLRHPDGSGRFFNPFDRGCF-QNFLA 456
RA+C+TC IERPLR+KHC+ CRRCVR FDHHCPF G C+ R NYRWF+++V+LF +S L +++L ++ + + + + Y+ F L +GL YH +++ LTTNE +N +R+ YL+ DG R +P+D+G F +NF+A
Sbjct: 279 RALCHTCNIERPLRAKHCKACRRCVRIFDHHCPFTGCCIARRNYRWFFIFVVLFNLSALCFIYLNFMYLKTVKKEWTMICTLIYMCGFELMAIGLFRYHYSLIKRALTTNEDINSYRFGYLKDKDGQVR--SPWDQGSFAKNFMA 421
BLAST of mRNA_S-ischiensis_contig11.2102.1 vs. uniprot
Match: A0A7S2PME3_9STRA (Palmitoyltransferase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PME3_9STRA) HSP 1 Score: 135 bits (341), Expect = 3.370e-35 Identity = 69/155 (44.52%), Postives = 99/155 (63.87%), Query Frame = 1
Query: 7 GGDGVPRAVCYTCAIERPLRSKHCRTCRRCVRAFDHHCPFVGNCVGRSNYRWFYLYVLLFTISCLLYMWLCLVWWWNLGFD----LVAVGSGAYVLFFTLFGLGLLLYHTQIVRNNLTTNEHMNWHRYSYLRHPDGSGRFFNPFDRGCFQNFLAR 459
GG + +C++C I +PLRSKHCR R+CV FDH CPFVGNCVG NY +FY Y + F ++ + M C ++ +GFD +V + G Y++ +++YHTQ++R N+TTNE N RY++ R D G+F+NPFDRGCF N++ R
Sbjct: 213 GGAVMTPPLCHSCHIVKPLRSKHCRVMRKCVLMFDHFCPFVGNCVGLFNYPYFYGYCVFFVLADIGLMMSCWLFMKKVGFDWFTLIVTIYCGLYIIPSGF----MVIYHTQLIRTNMTTNEMENRGRYAHFR--DNYGKFYNPFDRGCFTNWIER 361
BLAST of mRNA_S-ischiensis_contig11.2102.1 vs. uniprot
Match: A0A7S4I794_9STRA (Palmitoyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I794_9STRA) HSP 1 Score: 130 bits (326), Expect = 3.400e-34 Identity = 74/166 (44.58%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 1 LTGGDGVPR--AVCYTCAIERPLRSKHCRTCRRCVRAFDHHCPFVGNCVGRSNYRWFYLYVLLFTISCLLYMWLCLVWWW----NLGFDLVAVGSGAYVLFFTLFGLGLLLYHTQIVRNNLTTNEHMNWHRYSYLRHPDGSGRFFNPFDRGCFQNFLARFAAVHDQ 480
LTG P +C++C + +PLRSKHCR RRCV FDHHCPFVG +G NYR+FY ++L +++ L ++ V+ + F L GAY+ FF L G+LLYHTQ++ NLTTNEH N R YL+ D GR+ NPFD G +N L R D+
Sbjct: 51 LTGQSRKPPHPPLCHSCHLAKPLRSKHCRVTRRCVLLFDHHCPFVGATIGLYNYRYFYAFLLFGSMAILGFVPTLTVYLLRNPPSAPFPLGVAALGAYISFFCLPLFGMLLYHTQLIGRNLTTNEHQNMWRLKYLQ--DEYGRYRNPFDHGRVRNALGRMFPSEDE 214
BLAST of mRNA_S-ischiensis_contig11.2102.1 vs. uniprot
Match: A0A6U0TF19_9STRA (Palmitoyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TF19_9STRA) HSP 1 Score: 135 bits (341), Expect = 3.530e-34 Identity = 72/160 (45.00%), Postives = 99/160 (61.88%), Query Frame = 1
Query: 10 GDGVPRA-VCYTCAIERPLRSKHCRTCRRCVRAFDHHCPFVGNCVGRSNYRWFYLYVLLFTISCLLYMWLCLV------WWWNLGFDLVAVGSGAYVLFFTLFGLGLLLYHTQIVRNNLTTNEHMNWHRYSYLRHPDGSGRFFNPFDRGCFQNFLARFAA 468
GDG + +C+TC I RPLRSKHCR RRCVR FDH+CPFV N VG+ NYR+F++Y++ I ++++L + W W +G L+A F G+ +YH Q+V NLTTNE+ N +RY YL+ D +G FFNP+++G N L RF A
Sbjct: 360 GDGSSQLNLCHTCHIVRPLRSKHCRVTRRCVRDFDHYCPFVQNTVGQGNYRYFFMYLITLQIGMDIWIYLAALKLYRGGWHWVVGLSLIAHFP------FWSMSFGMCMYHVQLVLANLTTNEYSNRYRYDYLK--DAAGGFFNPYNKGFLYNVLDRFCA 511
BLAST of mRNA_S-ischiensis_contig11.2102.1 vs. uniprot
Match: A0A7S1GKG9_CYCTE (Palmitoyltransferase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKG9_CYCTE) HSP 1 Score: 132 bits (332), Expect = 4.460e-33 Identity = 72/152 (47.37%), Postives = 92/152 (60.53%), Query Frame = 1
Query: 28 AVCYTCAIERPLRSKHCRTCRRCVRAFDHHCPFVGNCVGRSNYRWFYLYVLLFTISCLLYMWLCLVWWWNLGFDLVAVG--------SGAYVLFFTLFGLGLLLYHTQIVRNNLTTNEHMNWHRYSYLRHPDGSGRFFNPFDRGCFQNFLAR 459
A+C+TC I RPLRSKHCRT RRC+ FDHHCPFVGN +G NY+WFYL +L T S + ++ LG L V SG+Y + G GLL+YHTQ+ NLTTNEH N RY YLR+ G ++ N F RG + +++ R
Sbjct: 366 ALCHTCHIARPLRSKHCRTTRRCILMFDHHCPFVGNTIGLQNYKWFYLMLLFLTTSIIGFL-------ITLGIYLHRVEQFSWPLCISGSYFGIYIFLGGGLLIYHTQLSTVNLTTNEHQNMARYKYLRNEHG--QYKNRFFRGAWNSYMDR 508
BLAST of mRNA_S-ischiensis_contig11.2102.1 vs. uniprot
Match: F0YHB7_AURAN (DHHC domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHB7_AURAN) HSP 1 Score: 129 bits (323), Expect = 2.200e-31 Identity = 66/148 (44.59%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 16 GVPRAVCYTCAIERPLRSKHCRTCRRCVRAFDHHCPFVGNCVGRSNYRWFYLYVLLFTISCLLYMWLCLVWWWNLGFDLVAVGSGAYVLFFTLFGLGLLLYHTQIVRNNLTTNEHMNWHRYSYLRHPDGSGRFFNPFDRGCFQNFLAR 459
G ++C++C + RP RSKHCR R CV AFDH+CP+VGN VG SNYR+FY Y FT + L + L + + G + + A+ F FGL ++ YHT+++ NLTTNEH+N+ RY + R D GR NPFD G N R
Sbjct: 429 GETASLCHSCHVVRPKRSKHCRAARTCVMAFDHYCPYVGNTVGLSNYRYFYAYCAFFTAAALQWELLAVAYLRARGRHYGLIAAMAWFALFICFGLAMVAYHTRLLSKNLTTNEHVNFGRYDHFR--DAEGRPTNPFDMGVCANVADR 574 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2102.1 >prot_S-ischiensis_contig11.2102.1 ID=prot_S-ischiensis_contig11.2102.1|Name=mRNA_S-ischiensis_contig11.2102.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=171bp LTGGDGVPRAVCYTCAIERPLRSKHCRTCRRCVRAFDHHCPFVGNCVGRSback to top mRNA from alignment at S-ischiensis_contig11:1213960..1215869+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2102.1 ID=mRNA_S-ischiensis_contig11.2102.1|Name=mRNA_S-ischiensis_contig11.2102.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1910bp|location=Sequence derived from alignment at S-ischiensis_contig11:1213960..1215869+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:1213960..1215869+ >mRNA_S-ischiensis_contig11.2102.1 ID=mRNA_S-ischiensis_contig11.2102.1|Name=mRNA_S-ischiensis_contig11.2102.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1026bp|location=Sequence derived from alignment at S-ischiensis_contig11:1213960..1215869+ (Schizocladia ischiensis KU_0333)back to top |