mRNA_S-ischiensis_contig11.2064.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2064.1 vs. uniprot
Match: A0A835ZFU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFU5_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.460e-45 Identity = 88/127 (69.29%), Postives = 100/127 (78.74%), Query Frame = 1
Query: 70 GCLLLIEDEVSILKFEKRMFERHGFSVHTATNGQEGLQLMKERMYDVVFTDLMMPVMDGYEAVRRFRQWEETQSEQPERRG---RPRQRVYAVSANASEHDHNPVSRLGMDGFASKPVKVKELIELV 441
G +LLIEDE+SILKFEKRMFE HGF V TATNG+EGLQ MK R YD VFTD++MPVMDGYE VR+FR+WE + +R G R +Q VYAVSANASE DH +GMDGFASKPVKVKEL+ELV
Sbjct: 795 GSVLLIEDELSILKFEKRMFELHGFEVDTATNGEEGLQKMKRRAYDAVFTDIVMPVMDGYETVRQFRRWEADAAADAQRGGGARRAKQVVYAVSANASEQDHMMAHAIGMDGFASKPVKVKELVELV 921
BLAST of mRNA_S-ischiensis_contig11.2064.1 vs. uniprot
Match: A0A7S3Y002_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y002_HETAK) HSP 1 Score: 124 bits (312), Expect = 9.100e-33 Identity = 68/138 (49.28%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 70 GCLLLIEDEVSILKFEKRMFERHGFSVHT-ATNGQEGLQLMKERMYDVVFTDLMMPVMDGYEAVRRFRQWEETQSEQPERRGRPRQRVYAVSANAS-EHDHNPVSRLG-MDGFASKPVKVKELIELVGHDGRNNILHA 474
G +LL+EDE+SILKF RMF++HGF VHT A NG EGL++M +Y VFTD+ MPVMDG+E VRRFR WE E+ RG RQ V AV+ANA + D + R G MD F +KP K+ +L+ + + + H+
Sbjct: 3 GRVLLVEDEMSILKFTARMFQKHGFQVHTTAMNGLEGLEMMNRNIYVAVFTDINMPVMDGFECVRRFRDWENESEERRSLRG-GRQFVCAVTANAGPQGDRDRALRTGLMDAFVAKPAKIMDLVAMARRSAEDTLGHS 139
BLAST of mRNA_S-ischiensis_contig11.2064.1 vs. uniprot
Match: A0A7S1DHP0_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DHP0_HEMAN) HSP 1 Score: 105 bits (261), Expect = 2.110e-22 Identity = 64/145 (44.14%), Postives = 89/145 (61.38%), Query Frame = 1
Query: 28 PRSLSGERAEK-KPK-GCLLLIEDEVSILKFEKRMFERHGFSVHTATNGQEGLQLMKERMYDVVFTDLMMPVMDGYEAVRRFRQWEETQSEQPERRGRPRQRVYAVSANASEHDHNPVSRLGMDGFASKPVKVKELIELVGHDGR 456
P + GE+A K K K G +LLIED+VS K + E+ G++V A NG EGL+ ++E+ +++V D+MMPVMDG E RRFRQWE+ QS R Q + A+SAN D +GMD F KPVK++EL+ + DG+
Sbjct: 544 PPTTQGEKAGKVKGKSGIILLIEDDVSTRKLMTKGLEKQGYTVVQAGNGVEGLEKLQEQRFNMVLCDIMMPVMDGVECTRRFRQWEKQQSS----RSGGAQYICALSANTEASDVAKTRDVGMDDFFPKPVKIQELLSHL--DGK 682
BLAST of mRNA_S-ischiensis_contig11.2064.1 vs. uniprot
Match: A0A7S0Z3C2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z3C2_9CRYP) HSP 1 Score: 104 bits (260), Expect = 2.640e-22 Identity = 57/122 (46.72%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 67 KGCLLLIEDEVSILKFEKRMFERHGFSVHTATNGQEGLQLMKERMYDVVFTDLMMPVMDGYEAVRRFRQWEETQSEQPERRGRPRQRVYAVSANASEHDHNPVSRLGMDGFASKPVKVKELI 432
KG +LLIED+V + + E+ FSV A NG+EGL+ +KE Y +V D+MMPVMDG E +RRFRQWE+ Q+ R Q V A+SAN D +GM+ F KPVK+KEL+
Sbjct: 478 KGTVLLIEDDVPTRRLMTKALEKQKFSVVQAGNGEEGLEKLKESRYSMVLCDIMMPVMDGVECIRRFRQWEQGQAS----REGGEQFVCALSANTEASDVEKTRNVGMNDFFPKPVKIKELL 595
BLAST of mRNA_S-ischiensis_contig11.2064.1 vs. uniprot
Match: A0A7S3KYQ4_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KYQ4_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 9.940e-20 Identity = 55/141 (39.01%), Postives = 82/141 (58.16%), Query Frame = 1
Query: 25 RPRSLSGERAEKKPKG--CLLLIEDEVSILKFEKRMFERHGFSVHTATNGQEGLQLMKERMYDVVFTDLMMPVMDGYEAVRRFRQWEETQSEQPERRGRPRQRVYAVSANASEHDHNPVSRLGMDGFASKPVKVKELIELV 441
RP++ + EK+P+ L++ED + K R ER G+ V A NGQ GL L+++R+YDV F D +MPV+DG++ R R+WE T P++R Q + +SA+AS D LGM+ F SKP+K +L L+
Sbjct: 415 RPKTSAMNLTEKQPQHQRTALVVEDAALVRKIMARALERLGWQVVQAENGQVGLHLLQQRLYDVCFMDFLMPVLDGFDCCRLLREWETTHRPSPQQR----QYIVGMSAHASPKDAEQGLVLGMNDFVSKPLKFDDLQALL 551
BLAST of mRNA_S-ischiensis_contig11.2064.1 vs. uniprot
Match: B7FU54_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FU54_PHATC) HSP 1 Score: 89.4 bits (220), Expect = 2.730e-19 Identity = 49/120 (40.83%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 79 LLIEDEVSILKFEKRMFERHGFSVHTATNGQEGLQLMKERMYDVVFTDLMMPVMDGYEAVRRFRQWEETQSEQPERRGRP--RQRVYAVSANASEHDHNPVSRLGMDGFASKPVKVKELI 432
L+IED + + K + FER GF V A +G EGL +KE ++DV D +MPVMDG + V+++R WE R RP RQ + +SA+A+ +D ++GMD F KPV +K+L+
Sbjct: 9 LVIEDSLVVRKSLAQAFERLGFVVTQAVDGLEGLNALKETIFDVTLCDFLMPVMDGMDCVKQYRDWE--------RENRPWFRQLIIGISAHANANDSGQGIKVGMDQFWPKPVSIKKLM 120
BLAST of mRNA_S-ischiensis_contig11.2064.1 vs. uniprot
Match: L1JXG5_GUITC (Uncharacterized protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JXG5_GUITC) HSP 1 Score: 94.4 bits (233), Expect = 1.070e-18 Identity = 51/122 (41.80%), Postives = 70/122 (57.38%), Query Frame = 1
Query: 76 LLLIEDEVSILKFEKRMFERHGFSVHTATNGQEGLQLMKERMYDVVFTDLMMPVMDGYEAVRRFRQWEETQSEQPERRGRPRQRVYAVSANASEHDHNPVSRLGMDGFASKPVKVKELIELV 441
+L++ED+V +R G+ VH A NG+EGL+ M+ RM+ +V D+MMPVMDG E V+R R WE TQS R Q + A+SAN D N GM F KPVK+ L++ +
Sbjct: 481 VLVVEDDVPTRTLMVHGLKRKGYVVHQAGNGEEGLEQMQRRMFHMVLCDIMMPVMDGVECVKRLRAWESTQS-------RTSQFICALSANTDVSDVNKCMGAGMSDFFPKPVKIPALLKFL 595
BLAST of mRNA_S-ischiensis_contig11.2064.1 vs. uniprot
Match: K0SQA0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQA0_THAOC) HSP 1 Score: 93.2 bits (230), Expect = 3.010e-18 Identity = 54/140 (38.57%), Postives = 83/140 (59.29%), Query Frame = 1
Query: 22 TRPRSLSGERAEKKPKGCLLLIEDEVSILKFEKRMFERHGFSVHTATNGQEGLQLMKERMYDVVFTDLMMPVMDGYEAVRRFRQWEETQSEQPERRGRPRQRVYAVSANASEHDHNPVSRLGMDGFASKPVKVKELIELV 441
T +S+ E E +P+ +L+++D ++I K R FER GF+V A NG +G ++MK R+YD+ D +MP++DG +AVRR R WE Q +PE Q V +SA+A+ D + GM+ F KPV +K L ++
Sbjct: 585 TISKSMEDEEPENRPRR-VLIVDDSLTIRKGLTRGFERLGFTVDEAENGLQGFKMMKSRLYDICIIDFLMPILDGPDAVRRLRAWE--QDHRPEFC----QYVIGISAHANGKDAQVGLKSGMNRFMGKPVPLKSLSDIA 717
BLAST of mRNA_S-ischiensis_contig11.2064.1 vs. uniprot
Match: A0A840LAH7_9BURK (Histidine kinase n=1 Tax=Paucibacter oligotrophus TaxID=1769250 RepID=A0A840LAH7_9BURK) HSP 1 Score: 91.7 bits (226), Expect = 1.060e-17 Identity = 57/151 (37.75%), Postives = 82/151 (54.30%), Query Frame = 1
Query: 76 LLLIEDEVSILKFEKRMFERHGFSVHTATNGQEGLQLMKERMYDVVFTDLMMPVMDGYEAVRRFRQWEETQSEQPERRGRPRQRVYAVSANASEHDHNPVSRLGMDGFASKPVKVKELIELVGHDGRNNILHAGERGRSPSPARSTPGVPS 528
+LL+ED KF + +R G V A NGQ+ L + R +D+V D+MMPVMDG A RRFR E+ PR + A++ANA + D + GMDGF SKP+K++E +L+ L A + SP+PA+ +P P+
Sbjct: 827 VLLVEDHPVNQKFALMLLKRWGHRVTLAENGQQALDQLALRRFDLVLMDMMMPVMDGLVATRRFRAGEQG----------PRTPIVAMTANAMQSDRERCAAAGMDGFISKPIKLQEFQDLLAQH-----LQARQE-LSPTPAKPSPAAPA 961
BLAST of mRNA_S-ischiensis_contig11.2064.1 vs. uniprot
Match: UPI000BE58F85 (response regulator n=1 Tax=Mangrovitalea sediminis TaxID=1982043 RepID=UPI000BE58F85) HSP 1 Score: 90.9 bits (224), Expect = 1.830e-17 Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 76 LLLIEDEVSILKFEKRMFERHGFSVHTATNGQEGLQLMKERMYDVVFTDLMMPVMDGYEAVRRFRQWEETQSEQPERRGRPRQRVYAVSANASEHDHNPVSRLGMDGFASKPVKVKELIELV 441
+L++ED L +R+ E+ G +V TAT+G+E + + +DVVF D ++P +DG+EA RR RQWE+ G+PR V A++A+A E D R GMD F +KPV++ +LI V
Sbjct: 657 VLVVEDNPVNLALTQRLLEKLGCTVVTATDGEEAVACCQAERFDVVFMDCLLPNVDGFEATRRLRQWEQDS-------GQPRTTVIALTASAMEKDEEKCLRAGMDAFIAKPVRI-DLIRAV 770 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2064.1 >prot_S-ischiensis_contig11.2064.1 ID=prot_S-ischiensis_contig11.2064.1|Name=mRNA_S-ischiensis_contig11.2064.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=222bp EGATLTPTRPRSLSGERAEKKPKGCLLLIEDEVSILKFEKRMFERHGFSVback to top mRNA from alignment at S-ischiensis_contig11:817991..821423+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2064.1 ID=mRNA_S-ischiensis_contig11.2064.1|Name=mRNA_S-ischiensis_contig11.2064.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3433bp|location=Sequence derived from alignment at S-ischiensis_contig11:817991..821423+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:817991..821423+ >mRNA_S-ischiensis_contig11.2064.1 ID=mRNA_S-ischiensis_contig11.2064.1|Name=mRNA_S-ischiensis_contig11.2064.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1332bp|location=Sequence derived from alignment at S-ischiensis_contig11:817991..821423+ (Schizocladia ischiensis KU_0333)back to top |