mRNA_S-ischiensis_contig11.2031.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2031.1
Unique NamemRNA_S-ischiensis_contig11.2031.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig11.2031.1 vs. uniprot
Match: A0A6H5KGL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL8_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 1.070e-72
Identity = 118/157 (75.16%), Postives = 130/157 (82.80%), Query Frame = 3 
Query:   36 SVQSQYRTLKAKPTGDRLAVRRSHIHGWGLFACDNFSKNEMLVEYMGEVIRQCVADLREVKYEEMGVGSCYLFRLDRDRIVDATRKGNLARFINHCCAPNANAKVVNVDNTANKKIIIFAAKDIKAGEEVTYDYKFEREDGGLQCHCGAATCAGAMN 506
            S Q+QYR LK +PTG  L VRRSHIHGWGLFA + F K+ MLVEYMGEV+RQCVADLREVKYEEMGVGSCYLFR D D IVDATRKGNLARFINHCC PNA A++VN++ T  KKIII A + IK GEE+TYDYKFEREDG L CHCGA  C G+MN
Sbjct:  437 SQQAQYRMLKTQPTGYGLKVRRSHIHGWGLFALEEFPKDAMLVEYMGEVVRQCVADLREVKYEEMGVGSCYLFRADADAIVDATRKGNLARFINHCCDPNAIARIVNLEGTKKKKIIIVAKRQIKPGEEITYDYKFEREDGQLSCHCGADVCYGSMN 593
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BLAST of mRNA_S-ischiensis_contig11.2031.1 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 6.240e-68
Identity = 116/154 (75.32%), Postives = 128/154 (83.12%), Query Frame = 3 
Query:   45 SQYRTLKAKPTGDRLAVRRSHIHGWGLFACDNFSKNEMLVEYMGEVIRQCVADLREVKYEEMGVGSCYLFRLDRDRIVDATRKGNLARFINHCCAPNANAKVVNVDNTANKKIIIFAAKDIKAGEEVTYDYKFEREDGGLQCHCGAATCAGAMN 506
            +QYR LK +PTG  L VRRSHIHGWGLFA + F K+ MLVEYMGEV+RQCVADLREVKYEEMGVGSCYLFR D D IVDATRKGNLARFINHCC PNA A++VN++ T  KKIII A + IK GEE+TYDYKFEREDG L CHCGA  C G+MN
Sbjct: 3004 AQYRMLKTQPTGYGLKVRRSHIHGWGLFALEEFPKDAMLVEYMGEVVRQCVADLREVKYEEMGVGSCYLFRADADAIVDATRKGNLARFINHCCDPNAIARIVNLEGTKKKKIIIVAKRQIKPGEEITYDYKFEREDGQLSCHCGADVCYGSMN 3157
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BLAST of mRNA_S-ischiensis_contig11.2031.1 vs. uniprot
Match: A0A835YK44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK44_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.760e-60
Identity = 98/156 (62.82%), Postives = 115/156 (73.72%), Query Frame = 3 
Query:   39 VQSQYRTLKAKPTGDRLAVRRSHIHGWGLFACDNFSKNEMLVEYMGEVIRQCVADLREVKYEEMGVGSCYLFRLDRDRIVDATRKGNLARFINHCCAPNANAKVVNVDNTANKKIIIFAAKDIKAGEEVTYDYKFEREDGGLQCHCGAATCAGAMN 506
            + ++YR LK  P   RL VRRSHIHGWGLF    F+ N+M+VEYMGE IR+CVAD RE KYEEMG+GSCYLF LD   I+DATR G  ARFINHCC PNA+AKVV VD     K++I A + +  GEEVTYDYKFE E+  + CHCGAA C G+MN
Sbjct:    1 MAARYRKLKEIPVEQRLVVRRSHIHGWGLFTLMPFAPNDMIVEYMGEKIRRCVADQREKKYEEMGLGSCYLFALDASTIIDATRAGGPARFINHCCGPNADAKVVAVDGVP--KLVIVARRALAVGEEVTYDYKFEYENDKIACHCGAAKCRGSMN 154
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BLAST of mRNA_S-ischiensis_contig11.2031.1 vs. uniprot
Match: A0A7S1DDE7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDE7_CYCTE)

HSP 1 Score: 205 bits (522), Expect = 4.350e-58
Identity = 95/160 (59.38%), Postives = 119/160 (74.38%), Query Frame = 3 
Query:   33 QSVQSQYRTLKAKPTGDRLAVRRSHIHGWGLFACDNFSKNEMLVEYMGEVIRQCVADLREVKYEEMGVGSCYLFRLDRDRIVDATRKGNLARFINHCCAPNANAKVVNVDNT--ANKKIIIFAAKDIKAGEEVTYDYKFEREDGGLQCHCGAATCAGAMN 506
            +S Q +Y+ +K+ P  +RLA RRSHIHGWGLF   +  K+ M+VEY+GE +RQC+ D RE  YE+ G+GSCY+FRLD  RIVDATR G++ARF+NHCC PNA AKV+ VD      KKI++FA + IKAGEE+TYDYKF  EDG L+C CGA  C G MN
Sbjct:  198 ESNQQKYKEMKSVPLQERLAARRSHIHGWGLFCKIDLPKDAMIVEYVGETVRQCIGDKREQAYEKSGIGSCYMFRLDLQRIVDATRIGSMARFMNHCCKPNAYAKVIAVDTDFGPEKKIVVFANRAIKAGEEITYDYKFPVEDGSLRCTCGAPNCIGRMN 357
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BLAST of mRNA_S-ischiensis_contig11.2031.1 vs. uniprot
Match: A0A7S0AEX1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AEX1_9STRA)

HSP 1 Score: 198 bits (503), Expect = 8.940e-58
Identity = 94/159 (59.12%), Postives = 117/159 (73.58%), Query Frame = 3 
Query:   36 SVQSQYRTLKAKPTGDRLAVRRSHIHGWGLFACDNFSKNEMLVEYMGEVIRQCVADLREVKYEEMGVGSCYLFRLDRDRIVDATRKGNLARFINHCCAPNANAKV--VNVDNTANKKIIIFAAKDIKAGEEVTYDYKFEREDGGLQCHCGAATCAGAMN 506
            +VQ +Y+ +K+ P GDRL  +RSHIHGWGLF   +  K++M++EYMGE++R  VAD RE  YEE GVGSCY+FRLD +RIVDAT  G +ARF+NH C  NA AKV  VN +    KKI++FA +DIKA EE+TYDYKF  EDG L+C CGA  C G MN
Sbjct:    9 AVQEKYKEMKSVPLGDRLVAKRSHIHGWGLFTKKDIKKHQMIIEYMGELLRFRVADKREKAYEESGVGSCYMFRLDLERIVDATMVGCMARFMNHSCQNNAYAKVITVNTEEGQEKKIVVFANRDIKADEEITYDYKFPVEDGSLKCTCGAPNCIGRMN 167
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BLAST of mRNA_S-ischiensis_contig11.2031.1 vs. uniprot
Match: B7GAQ1_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAQ1_PHATC)

HSP 1 Score: 195 bits (495), Expect = 8.970e-57
Identity = 91/154 (59.09%), Postives = 113/154 (73.38%), Query Frame = 3 
Query:   51 YRTLKAKPTGDRLAVRRSHIHGWGLFACDNFSKNEMLVEYMGEVIRQCVADLREVKYEEMGVGSCYLFRLDRDRIVDATRKGNLARFINHCCAPNANAKVVNVDNTA--NKKIIIFAAKDIKAGEEVTYDYKFEREDGGLQCHCGAATCAGAMN 506
            YR +KA P   RL  RRSHIHGWGLF   +  K++ ++EYMGEVIRQ +AD RE  YE  G GSCY+FRLD  RIVDAT+ G +ARF+NHCC PNA AK+++VD     ++KI++FA +DI AGEE+TYDYKF  EDG L+C CGA  C G +N
Sbjct:    1 YRRMKAVPIEQRLVARRSHIHGWGLFTKSDIQKDDPIIEYMGEVIRQPIADQRERAYEISGEGSCYMFRLDMQRIVDATKIGCMARFMNHCCGPNAYAKIISVDAELGQDRKIVVFANRDISAGEEITYDYKFPVEDGSLRCTCGAPNCIGRLN 154
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BLAST of mRNA_S-ischiensis_contig11.2031.1 vs. uniprot
Match: A0A7S1U877_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U877_9STRA)

HSP 1 Score: 187 bits (476), Expect = 2.070e-53
Identity = 90/166 (54.22%), Postives = 114/166 (68.67%), Query Frame = 3 
Query:   33 QSVQSQYRTLKAKPTGDRLAVRRSHIHGWGLFACDNFSKNEMLVEYMGEVIRQCVADLREVKYEEMGVGSCYLFRLDRDRIVDATRKGNLARFINHCCAPNANAKVVNVDNTA--------NKKIIIFAAKDIKAGEEVTYDYKFEREDGGLQCHCGAATCAGAMN 506
            ++  + YR LK+ P  +R+  +RS IHGWGLF      K+ M+VEY+G +I   V D RE  YEE+G+GSCY+FRL+R  IVDATR GNLARF+NHCC PNA AKV+ V   A        +++I+IFA +DI  GEE+TYDYKF  EDG L C+CGA  C GAMN
Sbjct:   29 KATSTAYRILKSVPFQERIEAKRSQIHGWGLFTKTAIRKDGMIVEYIGHLIGNTVGDARETFYEEVGIGSCYMFRLNRTSIVDATRAGNLARFMNHCCQPNAYAKVIQVQPRAAGADAGLPSERIVIFAKRDIALGEEITYDYKFASEDGKLCCNCGAPNCRGAMN 194
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BLAST of mRNA_S-ischiensis_contig11.2031.1 vs. uniprot
Match: A0A7S2R6Y7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6Y7_9STRA)

HSP 1 Score: 192 bits (489), Expect = 3.550e-53
Identity = 89/157 (56.69%), Postives = 116/157 (73.89%), Query Frame = 3 
Query:   36 SVQSQYRTLKAKPTGDRLAVRRSHIHGWGLFACDNFSKNEMLVEYMGEVIRQCVADLREVKYEEMGVGSCYLFRLDRDRIVDATRKGNLARFINHCCAPNANAKVVNVDNTANKKIIIFAAKDIKAGEEVTYDYKFEREDGGLQCHCGAATCAGAMN 506
            +V + Y+ ++++P  +RL  +RSH+HGWGLF     +K++M+VEYMGE IR  VADLRE +YE+ GVGSCYLFRLD+D IVDATRKG +ARFINH C PNA  KV+++DN   KKI+ FA + ++ GEEV YDYKF  ED  + CHCGA  C   +N
Sbjct:  209 TVNNLYKKMRSEPMENRLVAKRSHVHGWGLFVRVEVAKHDMIVEYMGESIRSIVADLREKQYEDQGVGSCYLFRLDKDEIVDATRKGCMARFINHSCEPNAYTKVIHLDN-GKKKIVFFALRALQVGEEVFYDYKFPIEDEKIPCHCGAPRCRRFLN 364
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BLAST of mRNA_S-ischiensis_contig11.2031.1 vs. uniprot
Match: W7TQT2_9STRA (Histone-lysine n-methyltransferase setd1a n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQT2_9STRA)

HSP 1 Score: 204 bits (518), Expect = 4.790e-53
Identity = 99/172 (57.56%), Postives = 123/172 (71.51%), Query Frame = 3 
Query:   12 GRGLPGGQSVQSQ-------YRTLKAKPTGDRLAVRRSHIHGWGLFACDNFSKNEMLVEYMGEVIRQCVADLREVKYEEMGVGSCYLFRLDRDRIVDATRKGNLARFINHCCAPNANAKVVNVDNTANKKIIIFAAKDIKAGEEVTYDYKFEREDGGLQCHCGAATCAGAMN 506
            G G+ GG S+ +        YR LKA P   RL V+RS IHGWGLFA +   K+ M+ EY+GEV+R CVADLRE +YEE G GSCYLFRLDR  IVDAT +GN+ARF+NHCC PN  A++++VD T  KKII  A +DI AGEEV+Y+Y F  ED  + C+CGA+TC G+MN
Sbjct: 2462 GEGVQGGPSINADNRSISQLYRELKAVPFSQRLLVKRSRIHGWGLFAKEPIKKDTMVAEYIGEVVRACVADLREKQYEESGQGSCYLFRLDRYDIVDATMQGNMARFVNHCCDPNCYARIISVD-TGEKKIIFLAKRDIAAGEEVSYNYHFSLEDEKIPCYCGASTCVGSMN 2632
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BLAST of mRNA_S-ischiensis_contig11.2031.1 vs. uniprot
Match: A0A7S0GGD2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GGD2_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.370e-52
Identity = 92/160 (57.50%), Postives = 117/160 (73.12%), Query Frame = 3 
Query:   33 QSVQSQYRTLKAKPTGDRLAVRRSHIHGWGLFACDNFSKNEMLVEYMGEVIRQCVADLREVKYEEMGVGSCYLFRLDRDRIVDATRKGNLARFINHCCAPNANAKVVNV--DNTANKKIIIFAAKDIKAGEEVTYDYKFEREDGGLQCHCGAATCAGAMN 506
            +S Q++Y  +K+ P  +RLA +RSHIHGWGLF   + +++ M++EYMGEV+ Q +AD RE  YE  G+GSCY+FRLD  RIVDAT  G +ARF+NHCC+PNA AK++ V  D    KKI IFA +DI  GEE+TYDYKF  EDG L+C CGA TC G MN
Sbjct:  366 ESNQAKYAEMKSVPLENRLAAKRSHIHGWGLFTKVDLARHAMIIEYMGEVVSQSIADKRERAYEMSGIGSCYMFRLDSQRIVDATMIGCMARFMNHCCSPNAYAKIITVETDKGLEKKIGIFANRDIGGGEEITYDYKFAVEDGSLRCTCGAPTCTGRMN 525
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGL8_9PHAE1.070e-7275.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHU3_ECTSI6.240e-6875.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YK44_9STRA1.760e-6062.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1DDE7_CYCTE4.350e-5859.38Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S0AEX1_9STRA8.940e-5859.12Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
B7GAQ1_PHATC8.970e-5759.09Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]
A0A7S1U877_9STRA2.070e-5354.22Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2R6Y7_9STRA3.550e-5356.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TQT2_9STRA4.790e-5357.56Histone-lysine n-methyltransferase setd1a n=2 Tax=... [more]
A0A7S0GGD2_9STRA1.370e-5257.50Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:561892..565544 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score198.7
Seed ortholog evalue1.5e-48
Seed eggNOG ortholog2880.D8LHU3
Preferred namePHF6
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K09186,ko:K09188,ko:K11422,ko:K14959,ko:K18494,ko:K22371
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko04934,ko05202,map00310,map04934,map05202
GOsGO:0000003,GO:0000122,GO:0000123,GO:0000902,GO:0000904,GO:0000976,GO:0000977,GO:0000980,GO:0000981,GO:0001012,GO:0001067,GO:0001158,GO:0001227,GO:0001541,GO:0001654,GO:0001894,GO:0002376,GO:0002520,GO:0002682,GO:0003002,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003680,GO:0003682,GO:0003690,GO:0003700,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005700,GO:0005730,GO:0005737,GO:0005794,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006325,GO:0006338,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006473,GO:0006475,GO:0006479,GO:0006725,GO:0006807,GO:0006928,GO:0006935,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007389,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0007444,GO:0007482,GO:0007548,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007623,GO:0007632,GO:0008023,GO:0008092,GO:0008150,GO:0008152,GO:0008157,GO:0008168,GO:0008170,GO:0008213,GO:0008270,GO:0008276,GO:0008285,GO:0008306,GO:0008354,GO:0008406,GO:0008542,GO:0008585,GO:0008757,GO:0009058,GO:0009059,GO:0009314,GO:0009416,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009952,GO:0009987,GO:0009994,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0012505,GO:0015631,GO:0016020,GO:0016043,GO:0016070,GO:0016278,GO:0016279,GO:0016458,GO:0016477,GO:0016569,GO:0016570,GO:0016571,GO:0016573,GO:0016604,GO:0016607,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018024,GO:0018026,GO:0018027,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0019902,GO:0019903,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0030030,GO:0030097,GO:0030154,GO:0030182,GO:0030728,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031090,GO:0031175,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032259,GO:0032268,GO:0032270,GO:0032409,GO:0032411,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032784,GO:0032786,GO:0032879,GO:0032922,GO:0032968,GO:0032989,GO:0032990,GO:0032991,GO:0033043,GO:0033044,GO:0034243,GO:0034641,GO:0034645,GO:0034654,GO:0034708,GO:0034968,GO:0035065,GO:0035097,GO:0035162,GO:0035216,GO:0035295,GO:0035326,GO:0035640,GO:0036211,GO:0040011,GO:0040029,GO:0042054,GO:0042127,GO:0042221,GO:0042330,GO:0042393,GO:0042592,GO:0042800,GO:0042802,GO:0042803,GO:0042826,GO:0043021,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043543,GO:0043565,GO:0043933,GO:0043966,GO:0043967,GO:0043984,GO:0044030,GO:0044085,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044648,GO:0044665,GO:0044703,GO:0044728,GO:0044877,GO:0045137,GO:0045322,GO:0045595,GO:0045637,GO:0045652,GO:0045815,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046545,GO:0046660,GO:0046872,GO:0046914,GO:0046983,GO:0048096,GO:0048167,GO:0048168,GO:0048172,GO:0048468,GO:0048477,GO:0048511,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048536,GO:0048568,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048736,GO:0048737,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0048871,GO:0048872,GO:0048873,GO:0050776,GO:0050789,GO:0050793,GO:0050794,GO:0050804,GO:0050877,GO:0050890,GO:0050896,GO:0051049,GO:0051050,GO:0051052,GO:0051053,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051219,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051568,GO:0051569,GO:0051571,GO:0051674,GO:0051704,GO:0060216,GO:0060249,GO:0060255,GO:0060429,GO:0061458,GO:0061564,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070577,GO:0071339,GO:0071440,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080182,GO:0090304,GO:0097110,GO:0097159,GO:0097485,GO:0097659,GO:0099177,GO:0120036,GO:0120039,GO:0140030,GO:0140033,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901532,GO:1901564,GO:1901576,GO:1901674,GO:1901983,GO:1902036,GO:1902275,GO:1902493,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1905269,GO:1905642,GO:1990234,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000615,GO:2000736,GO:2000756,GO:2001023,GO:2001025,GO:2001038,GO:2001040,GO:2001141,GO:2001252
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG1080@2759,KOG1084@2759,KOG4443@2759
EC2.1.1.43,2.3.2.26
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03036,ko04121
Hectar predicted targeting categoryother localisation
Exons4
Model size1496
Cds size354
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2031.1prot_S-ischiensis_contig11.2031.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 563315..564557 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815591.0473983-UTR-S-ischiensis_contig11:561891..5619351622815591.0473983-UTR-S-ischiensis_contig11:561891..561935Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 561892..561935 +
1695739789.5478313-UTR-S-ischiensis_contig11:561891..5619351695739789.5478313-UTR-S-ischiensis_contig11:561891..561935Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 561892..561935 +
1622815591.0635862-UTR-S-ischiensis_contig11:562341..5624471622815591.0635862-UTR-S-ischiensis_contig11:562341..562447Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 562342..562447 +
1695739789.567435-UTR-S-ischiensis_contig11:562341..5624471695739789.567435-UTR-S-ischiensis_contig11:562341..562447Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 562342..562447 +
1622815591.077979-UTR-S-ischiensis_contig11:563309..5633141622815591.077979-UTR-S-ischiensis_contig11:563309..563314Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 563310..563314 +
1695739789.5902226-UTR-S-ischiensis_contig11:563309..5633141695739789.5902226-UTR-S-ischiensis_contig11:563309..563314Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 563310..563314 +
1622815591.121092-UTR-S-ischiensis_contig11:564557..5655441622815591.121092-UTR-S-ischiensis_contig11:564557..565544Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 564558..565544 +
1695739789.6214812-UTR-S-ischiensis_contig11:564557..5655441695739789.6214812-UTR-S-ischiensis_contig11:564557..565544Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 564558..565544 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815591.0898721-CDS-S-ischiensis_contig11:563314..5634881622815591.0898721-CDS-S-ischiensis_contig11:563314..563488Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 563315..563488 +
1695739789.602206-CDS-S-ischiensis_contig11:563314..5634881695739789.602206-CDS-S-ischiensis_contig11:563314..563488Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 563315..563488 +
1622815591.1057746-CDS-S-ischiensis_contig11:564377..5645571622815591.1057746-CDS-S-ischiensis_contig11:564377..564557Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 564378..564557 +
1695739789.6127787-CDS-S-ischiensis_contig11:564377..5645571695739789.6127787-CDS-S-ischiensis_contig11:564377..564557Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 564378..564557 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2031.1

>prot_S-ischiensis_contig11.2031.1 ID=prot_S-ischiensis_contig11.2031.1|Name=mRNA_S-ischiensis_contig11.2031.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=118bp
MLVEYMGEVIRQCVADLREVKYEEMGVGSCYLFRLDRDRIVDATRKGNLA
RFINHCCAPNANAKVVNVDNTANKKIIIFAAKDIKAGEEVTYDYKFERED
GGLQCHCGAATCAGAMN*
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mRNA from alignment at S-ischiensis_contig11:561892..565544+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2031.1 ID=mRNA_S-ischiensis_contig11.2031.1|Name=mRNA_S-ischiensis_contig11.2031.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3653bp|location=Sequence derived from alignment at S-ischiensis_contig11:561892..565544+ (Schizocladia ischiensis KU_0333)
GGAGCGGCGGGGGCAGGGGGTTGCCGGGGGGGCAATCCGTGCAGGTGCGG
GTGTGGTGATTGATGTGCGGTTTTGGAGGGCACGTGCCGTACTGCAAGGT
GGATGACTACTATTTTACTTGAAACATAGCTTGGCTCACTATTGTACCTA
CTGTAGTCCGATGGACTATCTTGGCGAAATACTTCGAAGTACGCACAGTA
GACAATAGGATTCTACTCTACTTGTCTGTGTTTAGTATGCTTTTGGAAGC
CCCGCTAGTGAACCAAGTGGGGGTTAACTTGGTGCAGTGCAATTTGCCGC
TGTCAACTCATGGGAAGTACCTTGACCACCCATTACCACCACCACCACCA
CCACCACTCCAGCAGTCCACAGTCACTTGGCACAAGCAACCAGCTCATAC
GTACTCCCCCCACCCCCCCTCGCCCCTCCCCTTTGCCGTCTGTACACCAG
TCCCAGTACCGCACTCTCAAGGCAAAGCCCACCGGTGACCGCCTGGCCGT
GCGTCGCTCCCACATACACGGGTGGGGCCTCTTTGCCTGCGACAACTTCA
GCAAAAGTGAGTGGGCGCAACGCCTGTCCCTAGCTCTAGGGGTGGCAAAA
GGGCCAGCCAGGTCCCTGCTTGCCTGCCTTGCCGCCTGCCCGCTCACCTG
CCTGCCTGCCTGCGTGCCTGCGTGCGTGCCTGGTGCGTGCCTGCCCGCCT
ACGCAGCTGCATGCGGTGCACTCGTGCGGTGCGTGCGTGGCTGGGCAGGC
TGCAGGCAGCTGCTGAGGTTGCTCCCACGACAACCGCCGCTAACTTGTGC
CAATGTTTATAATACTTTGAGATACTGAAGTACTTTAAAGAGAGTCAAGT
ACTGTACCTGTAGGTACTCCCACGCGCTCTGTGTAGGTACTGTGCGGGAT
GCTGCGCATGCACGGTCGAGCATGTACTGAGTATGGCAAACTTCCAAGCC
TGTGCATTTTACTCCTCTCTGGACTCGTGCTACGGCAAGCACGGTGTGAG
CACACATACTGCAGCATGTCCCCAACGATACCGCTACAAACATGCACGTG
ACACATGGGTACATATACTGCTGCGTGTCCCCAACAATACCGCTAAACAG
CCCCGTAGTGTATCCGTGTGGGACACAAGAGGCAACTGGTTGCGCCGCCA
CTCAGAGTCCCTCCCTGTCTCTGCCTCCCCCCTGTGCCCCGCACCGCTCC
CTCCTTCGCTAAACATTGTCCGGCATGTTGGTCCGTGTTGCACACTGGCG
GTGGCGGCGGCGGCGGCGGCTCCCCCCTGTGCCCCGTCCTCCTCCCTCCT
TCCCTAAACGTTGGCCGGCATGCTTCCCCGTGCTGCACACTGGCGGTGGT
GGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGG
TGGCGGCGGCGGGTGCAGACGAGATGCTGGTGGAGTACATGGGAGAGGTG
ATCCGGCAGTGCGTGGCTGACCTTCGGGAGGTGAAGTATGAGGAGATGGG
CGTGGGCAGCTGCTACCTCTTCCGCCTGGACCGGGACCGCATTGTGGACG
CCACGCGCAAGGGGAACCTGGCCCGCTTCATCAACCACTGCTGCGCCGTG
AGTTTTCTTTTGCCTGCTGCAGTATGTTTCGTGTTTGGTCGCTTCATGCC
CGATGATGTGCTTGTGTGTGTGTGTGTGTGCTACAGTAGGTGTGTTTGTG
CCAGTTGTCGGAACTGCCTGCCGCGAAGCAGCCATGATGACAGAAAAGTG
AGGGCGCTGACTTTGTTGTACGACAAGTACTTCGAAGTAGCAACCGGTCT
CCCCAGCAAAGAAGGGCCGCTAGTTCGTTGTGCAGGGGCTCCCCTTATGC
AATGCCCCGGCGGTCAAAGGTCCAATGGTCGTTTTTCTTTTAGTGTCCGG
CAAGTGACTCCTGGGAACACCCGCATCACATCATCACCTCGACCACCGAG
CCCCACCCCCACTACATAAATACTTGTGTACCACTATCACCACCATGCCA
CACCCGCCCACCACCGTGCTGGTGGCCAGTGGTCTACTAGAGGACGGCTG
CTCAGCCAAGCAAGTCATGAGTGGCCGCCACTCCCTTGGGACAGCCGAAC
AAGTCAAGGCGGGTGAAGGAGGGCCTGCCGTGGTGGGGCCCGGGACTCGC
AAAGTTAATAGGGATACATCTGTTTGCTGTGGACGCGCTTATTAACTTTT
CTATCCTCACCAAAGGCCGGCGCCAAGTTGATCAACCTGGACAACCCCAA
CCCATGACCATTGTAAAACCTGCTGCTGTGCTCTACAGTAGTTCAGTACT
TGTCTACTGTACAGTACGCGCGCTTCGAAATGTTGTTACTGTAAGCCTAA
CCCCCACAGTTGTAGTGAACTTTTGCGGTACTCGTACTCGAGTAAACCCC
AAGCCGTGACCCCTGAACCCGAAAACTACACCCTAACTAGGAACCCCCCT
GGCGCCGCCCGGCCCTCCCCCCCCGTGTGCAACCAGCCAAACGCCAACGC
CAAGGTGGTGAACGTGGACAACACGGCCAACAAGAAGATCATCATCTTCG
CCGCCAAGGACATCAAGGCCGGGGAGGAGGTGACCTACGACTACAAGTTC
GAGCGGGAGGACGGCGGCCTGCAGTGCCACTGTGGCGCCGCCACGTGCGC
CGGCGCCATGAACTGACCGGACTGTGCCATGGCCAGCAGGGGGCGCATGG
CCAGCGTGCATGATGTCGTGGCAGCGAATCTTGGGGGTCTCTGGGGACCG
CCCACCCCCCACTGTTGGGGAATCCTTAAGGATCCTCATATGAAAGGGGT
CCGATCTGTGTAATGTGTGTGTGTGGGGGGGGGGAGTGTCTCGTAGGGAA
GGGCAACCCCCCCGGCCCTCCCCTGCTTGAAGTTGCCGCACGGTCCATGG
CTACTACTGTAACAGTGGGAGGTCTGCCTGAGGCCCACATGGGCAGGAGG
GCGGGAGCTGAGCTAGCCGCCCAGGAGAGGAGGGAAAGGGAAGGTGCCCC
TGCTCGCCTGCCTTCGCCTCTCGCTGGCCGCTTAGAGGTGCGCACTGCAG
CCAAGTAATGGGAGCGTACTTGTAGCGTGCGTTAGAAAGGGTTGTGACCC
CGGCCCGGGCCCCGCGGGCCTTTCTCCCCTGGGGTGCTGGAAGCGCATGC
ACCCGCAGCTTCCGTGCCACGCCCACTCGCTGCAGCAGCGGCGGCGGTGT
TGCGTAGATCTTGCTGGCGGCCGTCGCCTTGGGCTGATGGCACAGGAGCC
TGTCGTCATGGCTGACGACATAGATGCCGTCGCAGATTTCGGGCGCTGTG
GCTCCTGCCACAGCTGCAGCGGCACAGGCGCTCGGGGCTCCTGAAGGCTG
CGAGTAGCTGCACTGTCCCACCGTGACCGCCCCCCCGACACGGAGTAGAG
GGAGGGGGGCTCCTGAGCCAAGTGTGGTGTGTGCCTGAGTACATACATAT
GTCTGTACATAGTTGCAACATGTACTGTAGTGGCTCTGTTGCCCCTGCGC
CACGCCAGGTGGCAACTACCACAGTACTTCGAAGTACTATTTTAGTGATT
TCAATAATGAGACCAGATGGTGCCACAGACAAAAGCCAAATGAGAGATTC
TTAGCAGCCACACGACTGCAATGGGTCATGCAAGGGCCCCGTGAAAGCCC
CAC
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:561892..565544+

>mRNA_S-ischiensis_contig11.2031.1 ID=mRNA_S-ischiensis_contig11.2031.1|Name=mRNA_S-ischiensis_contig11.2031.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=708bp|location=Sequence derived from alignment at S-ischiensis_contig11:561892..565544+ (Schizocladia ischiensis KU_0333)
ATGCTGGTGGAGTACATGGGAGAGGTGATCCGGCAGTGCGTGGCTGACCT
TCGGGAGGTGAAGTATGAGGAGATGGGCGTGGGCAGCTGCTACCTCTTCC
GCCTGGACCGGGACCGCATTGTGGACGCCACGCGCAAGGGGAACCTGGCC
CGCTTCATCAACCACTGCTGCGCCATGCTGGTGGAGTACATGGGAGAGGT
GATCCGGCAGTGCGTGGCTGACCTTCGGGAGGTGAAGTATGAGGAGATGG
GCGTGGGCAGCTGCTACCTCTTCCGCCTGGACCGGGACCGCATTGTGGAC
GCCACGCGCAAGGGGAACCTGGCCCGCTTCATCAACCACTGCTGCGCCCC
AAACGCCAACGCCAAGGTGGTGAACGTGGACAACACGGCCAACAAGAAGA
TCATCATCTTCGCCGCCAAGGACATCAAGGCCGGGGAGGAGGTGACCTAC
GACTACAAGTTCGAGCGGGAGGACGGCGGCCTGCAGTGCCACTGTGGCGC
CGCCACGTGCGCCGGCGCCATGAACTGACCAAACGCCAACGCCAAGGTGG
TGAACGTGGACAACACGGCCAACAAGAAGATCATCATCTTCGCCGCCAAG
GACATCAAGGCCGGGGAGGAGGTGACCTACGACTACAAGTTCGAGCGGGA
GGACGGCGGCCTGCAGTGCCACTGTGGCGCCGCCACGTGCGCCGGCGCCA
TGAACTGA
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