|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 707 |
| Cds size | 705 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815576.2781355-CDS-S-ischiensis_contig11:434593..434938 | 1622815576.2781355-CDS-S-ischiensis_contig11:434593..434938 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 434594..434938 + |
| 1695739780.7592723-CDS-S-ischiensis_contig11:434593..434938 | 1695739780.7592723-CDS-S-ischiensis_contig11:434593..434938 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 434594..434938 + |
| 1622815576.2878313-CDS-S-ischiensis_contig11:435356..435716 | 1622815576.2878313-CDS-S-ischiensis_contig11:435356..435716 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 435357..435716 + |
| 1695739780.7677958-CDS-S-ischiensis_contig11:435356..435716 | 1695739780.7677958-CDS-S-ischiensis_contig11:435356..435716 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 435357..435716 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2012.1 >prot_S-ischiensis_contig11.2012.1 ID=prot_S-ischiensis_contig11.2012.1|Name=mRNA_S-ischiensis_contig11.2012.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=235bp
VAAAATPTAAVVADSSGVTTGQLERAAGAALGDWQAAGFAADAIWAGWGW
RTAPAVFWRACGWDKCSGWGVVVSEAVRWLVFAAMAQRGRRHEVGAALLA
PLIFPKVLEQTHMLQVLQQNDTRRAQNEAARLNGQPPPHTLVAPSKAKLA
GPVTRGVAWGAAMFLFSPHATYVAGALWFLARTFYELADIHSAGYEGVGN
SAGGTGSHDSENNKASLASLVAACLQRPFLARHAA back to topmRNA from alignment at S-ischiensis_contig11:434594..435717+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig11.2012.1 ID=mRNA_S-ischiensis_contig11.2012.1|Name=mRNA_S-ischiensis_contig11.2012.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1124bp|location=Sequence derived from alignment at S-ischiensis_contig11:434594..435717+ (Schizocladia ischiensis KU_0333)
GTAGCAGCGGCGGCAACTCCGACGGCTGCGGTGGTGGCGGATAGTTCTGG
GGTGACAACGGGGCAACTGGAGAGGGCTGCTGGTGCCGCTCTTGGGGACT
GGCAAGCGGCCGGGTTCGCAGCTGATGCTATTTGGGCAGGCTGGGGCTGG
CGGACGGCCCCTGCTGTTTTCTGGCGAGCGTGTGGCTGGGACAAGTGTAG
TGGGTGGGGGGTGGTGGTGAGCGAGGCGGTGCGGTGGCTCGTGTTTGCGG
CCATGGCGCAGCGGGGGCGGCGGCACGAGGTGGGGGCAGCGCTGTTGGCC
CCGCTGATCTTCCCCAAGGTGCTGGAACAGACGCACATGCTCCAGGTGGG
TGGCGCAGTCCTTGTCCTACGAGGTGCTTCGTACGAGCGAGTAGAGAGCA
CGCGAGTGCGTACGAATCGGTTGGGGCGGACCCCTGCGGACAATGCAATG
GACCGTGTGTGCTCGAGTACTGCCGAGGCGTTTGCCGGTTGGTCTCCTCC
ACTGGGGGCCAGCGGATCTTCGCTGCATAAGCGAGCAAGAACACTCAGCA
ACGTGCGCGAACACCTGCCAGCTTACGGCAATGCGTTTGTAGTGCTGCTT
GAGTGCAAGTGTGCCGTCCATATATGTACTCGGGTTGTGCTTGCCGTAGT
CCCGAGACCGTTGACCACGTGCCTCGGTCGAGCGGGAGCAGCAAGTGTAC
AGTAGAATTTGCATCGAACGCGGCCATCCACACGCGCACCCCCCACCGCT
TGTACCCCGCCAGGTGCTGCAGCAGAATGACACCCGCCGGGCGCAGAACG
AGGCCGCCCGCCTCAACGGCCAGCCCCCGCCCCACACCCTCGTCGCCCCC
TCCAAGGCCAAGCTGGCGGGCCCGGTCACCCGCGGCGTCGCCTGGGGCGC
CGCCATGTTCCTCTTCTCCCCGCACGCCACCTACGTGGCCGGCGCGCTGT
GGTTCCTCGCCCGAACCTTCTACGAGCTAGCGGACATACACTCCGCGGGG
TATGAGGGCGTCGGCAACAGCGCCGGTGGCACCGGCAGCCACGACAGCGA
AAACAACAAGGCCTCGCTGGCCTCGCTAGTCGCGGCGTGCCTGCAGCGGC
CCTTCCTCGCCCGCCACGCGGCCG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig11:434594..435717+ >mRNA_S-ischiensis_contig11.2012.1 ID=mRNA_S-ischiensis_contig11.2012.1|Name=mRNA_S-ischiensis_contig11.2012.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1410bp|location=Sequence derived from alignment at S-ischiensis_contig11:434594..435717+ (Schizocladia ischiensis KU_0333)
GTAGCAGCGGCGGCAACTCCGACGGCTGCGGTGGTGGCGGATAGTTCTGG
GGTGACAACGGGGCAACTGGAGAGGGCTGCTGGTGCCGCTCTTGGGGACT
GGCAAGCGGCCGGGTTCGCAGCTGATGCTATTTGGGCAGGCTGGGGCTGG
CGGACGGCCCCTGCTGTTTTCTGGCGAGCGTGTGGCTGGGACAAGTGTAG
TGGGTGGGGGGTGGTGGTGAGCGAGGCGGTGCGGTGGCTCGTGTTTGCGG
CCATGGCGCAGCGGGGGCGGCGGCACGAGGTGGGGGCAGCGCTGTTGGCC
CCGCTGATCTTCCCCAAGGTGCTGGAACAGACGCACATGCTCCAGGTAGC
AGCGGCGGCAACTCCGACGGCTGCGGTGGTGGCGGATAGTTCTGGGGTGA
CAACGGGGCAACTGGAGAGGGCTGCTGGTGCCGCTCTTGGGGACTGGCAA
GCGGCCGGGTTCGCAGCTGATGCTATTTGGGCAGGCTGGGGCTGGCGGAC
GGCCCCTGCTGTTTTCTGGCGAGCGTGTGGCTGGGACAAGTGTAGTGGGT
GGGGGGTGGTGGTGAGCGAGGCGGTGCGGTGGCTCGTGTTTGCGGCCATG
GCGCAGCGGGGGCGGCGGCACGAGGTGGGGGCAGCGCTGTTGGCCCCGCT
GATCTTCCCCAAGGTGCTGGAACAGACGCACATGCTCCAGGTGCTGCAGC
AGAATGACACCCGCCGGGCGCAGAACGAGGCCGCCCGCCTCAACGGCCAG
CCCCCGCCCCACACCCTCGTCGCCCCCTCCAAGGCCAAGCTGGCGGGCCC
GGTCACCCGCGGCGTCGCCTGGGGCGCCGCCATGTTCCTCTTCTCCCCGC
ACGCCACCTACGTGGCCGGCGCGCTGTGGTTCCTCGCCCGAACCTTCTAC
GAGCTAGCGGACATACACTCCGCGGGGTATGAGGGCGTCGGCAACAGCGC
CGGTGGCACCGGCAGCCACGACAGCGAAAACAACAAGGCCTCGCTGGCCT
CGCTAGTCGCGGCGTGCCTGCAGCGGCCCTTCCTCGCCCGCCACGCGGCC
GTGCTGCAGCAGAATGACACCCGCCGGGCGCAGAACGAGGCCGCCCGCCT
CAACGGCCAGCCCCCGCCCCACACCCTCGTCGCCCCCTCCAAGGCCAAGC
TGGCGGGCCCGGTCACCCGCGGCGTCGCCTGGGGCGCCGCCATGTTCCTC
TTCTCCCCGCACGCCACCTACGTGGCCGGCGCGCTGTGGTTCCTCGCCCG
AACCTTCTACGAGCTAGCGGACATACACTCCGCGGGGTATGAGGGCGTCG
GCAACAGCGCCGGTGGCACCGGCAGCCACGACAGCGAAAACAACAAGGCC
TCGCTGGCCTCGCTAGTCGCGGCGTGCCTGCAGCGGCCCTTCCTCGCCCG
CCACGCGGCC back to top
|