mRNA_S-ischiensis_contig11.1984.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.1984.1 vs. uniprot
Match: A0A835YS26_9STRA (DNA primase large subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS26_9STRA) HSP 1 Score: 179 bits (453), Expect = 4.840e-46 Identity = 138/421 (32.78%), Postives = 185/421 (43.94%), Query Frame = 1
Query: 187 MYVERPTDDVTLDEFVSSAVSRLGLFMQLTDGKAGPALG---ASHAQQS------------------RLDTIGHFVLRLACCRKRGLAHWFVQMEKELFNARLKRHLSTDTELGHLS--QSRCTAIPEIYHLEWLTPVDSVAVEGDERLRRGLEDTLGTDMSSVAAFPDTLGAGALPRGAGEHTEREEASSCSPGLSLRPGPNDGSGDTPVAFRCPFRHALELVRARRAYLVGGFAYVSVRQLPEVATEHFGGVLVSALDVASRALPGVERDERVQEALEEIRRKIKEVREPRPSGGLRAWARGPVTRANLEVLANRHFPLCMREMLGALRRDHRLKHDGRLQLLLFLKGCGMEVEEALELWREEFRQVMSAQEYQKKRYEYTVRHLYGLEGKMHNKAPYTCGQIMRSAPPGPGQVHGCPF 1380
MY P++++TLDEF A+ RL + +L D KA G H +++ R DT+ HF+LRLA CR L WF+ E LF RL+ ST G +S QS A V D+ RR L PG + +R PF A +L+ R YL GG+AYV V+++ + F L +L AS A P V D R L+ + R+ R GG + +L+ +A R PLCMR + ALRRDH+LKH GRLQ LFLKG G+ +E+A W+ EF +VMS + K Y Y VRH+YG EGK N PY+C +I+ A PG G+ HGCP+
Sbjct: 27 MYTTPPSEELTLDEFELFALDRLTVLRKLEDLKARGYKGREFTEHLEKAVNTHMKINSLSENVEEAIRKDTVSHFILRLAYCRTEDLRRWFLTQESALFRYRLESLSST----GIISFIQSNGLAF-------------EVVSADDKAARRSR------------------------------------------LLTAPGATAAEFERCTFYRIPFAQATDLIGQRLVYLEGGYAYVPVQRVVAIVVARFRAALSRSLAEASGAFPAVTGDPRFGPLLQNMSRQYV----GRDFGGXXXXXXDAIRPEHLDAMAARSMPLCMRGLHLALRRDHKLKHMGRLQYGLFLKGAGLSMEDAAAFWQSEFTRVMSVDAFTKG-YAYNVRHMYGKEGKRTNYTPYSCLKIIMGAAPGAGEHHGCPY 383
BLAST of mRNA_S-ischiensis_contig11.1984.1 vs. uniprot
Match: UPI0009E3BF7F (DNA primase large subunit-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3BF7F) HSP 1 Score: 179 bits (454), Expect = 6.130e-46 Identity = 140/426 (32.86%), Postives = 190/426 (44.60%), Query Frame = 1
Query: 187 MYVERPTDDVTLDEFVSSAVSRLGLFMQL-TDG-------------------KAGPALGASHAQQS--------RLDTIGHFVLRLACCRKRGLAHWFVQMEKELFNARLKRHLSTDTELGHLSQSRCTAIPEIYHLEWLTPVDSVAVEGDERLRRGLEDTLGTDMSSVAAFPDTLGAGALPRGAGEHTEREEASSCSPGLSLRPGPNDGSGDTPVAFRCPFRHALELVRARRAYLVGGFAYVSVRQLPEVATEHFGGVLVSALDVASRALPGVERDERVQEALEEIRRKIKEVREPRPSGGLRAWARGPVTRANLEVLANRHFPLCMREMLGALRRDHRLKHDGRLQLLLFLKGCGMEVEEALELWREEFRQVMSAQEYQKKRYEYTVRHLYGLEGKMHNKAPYTCGQIMRSAPPGPGQVHGCPF 1380
MY PTD++TL+EF A+ RL + ++ T G K P +H + R D I HF+LRLA CR L WF+ E ELF RL TE+ + E L++ P+D E E L D G ++S + F+ PF AL+LVR+R+ YL GFAYV L + F L AL + +RALP +E DER+ L + R+ + A G VT ++ L+ FPLCMR++ AL+ +H LKH GRLQ LFLKG G+ +EEAL WR EF ++M ++ K+ Y Y +RH YG EGK + PY+C +I+ S PGPG HGCPF
Sbjct: 32 MYKVPPTDNITLEEFEEFAIDRLKVLREVETFGIRYKRSSEEYDTAMKESLKKFLPQAQKAHKNREDEINITERRKDHISHFILRLAYCRSEDLRRWFLSQEVELFRFRL-------TEVAKIDSKEVDDFLEANGLDY-KPIDPAEREEKES---ELMDA-GFNLSHLKVVATDY-----------------------------------------FKVPFVEALDLVRSRKVYLENGFAYVPRDDLVSLVANEFRMQLSRALAMTARALPYLEEDERLLPKLTNLSRQY-----VGQDYSHKKTAAGKVTLDQIDSLSRSSFPLCMRQLHTALKENHHLKHGGRLQYGLFLKGIGLSLEEALIFWRAEFTKLMDVDKFDKQ-YAYNIRHNYGKEGKRADYTPYSCMKIIMSNAPGPGDHHGCPF 398
BLAST of mRNA_S-ischiensis_contig11.1984.1 vs. uniprot
Match: UPI001CF25C61 (DNA primase large subunit-like n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF25C61) HSP 1 Score: 176 bits (446), Expect = 6.780e-45 Identity = 133/435 (30.57%), Postives = 191/435 (43.91%), Query Frame = 1
Query: 187 MYVERPTDDVTLDEFVSSAVSRLGLFMQLTDGKAGPALGASHAQQS----------------------------------RLDTIGHFVLRLACCRKRGLAHWFVQMEKELFNARLKRHLSTDTELGHLSQSRCTAIPEIYHLEWLTPVDSVAVEGDERLRR-GLEDTLGTDMSSVAAFPDTLGAGALPRGAGEHTEREEASSCSPGLSLRPGPNDGSGDTPVAFRCPFRHALELVRARRAYLVGGFAYVSVRQLPEVATEHFGGVLVSALDVASRALPGVERDERVQEALEEIRRKI--KEVREPRPSGGLRAWARGPVTRANLEVLANRHFPLCMREMLGALRRDHRLKHDGRLQLLLFLKGCGMEVEEALELWREEFRQVMSAQEYQKKRYEYTVRHLYGLEGKMHNKAPYTCGQIMRSAPPGPGQVHGCPF 1380
MY E PT ++TL+EF A+ RL + ++ LG H + S + D I HF+LRLA CR L WF+ E ELF R +L+++ E L E E+++ E L T + EHT+ F+ PF AL+LVR R+ YL GFAYV +L + + F L AL + +RALP +E D+R+ L + R+ ++ + R +G VT ++ L+ +PLCMR++ A++ H LKH GRLQ LF+KG G+ +EEAL WR EF +VM ++ K+ Y Y +RH YG EGK + PY+C +I+ + PPGPG HGCPF
Sbjct: 29 MYKEPPTGNITLEEFEEFAIDRLKVLREIE------TLGIRHKRGSDDYVRAMKESLKKFLPRSYKLSFEGHVEEILSERKKDHISHFILRLAYCRSEDLRRWFLSQEVELFRFRF----------AYLAETESQQADEFLKSNGLEYKPISEAERREKVKELAFESILETKV--------------------EHTDY--------------------------FKVPFADALDLVRGRKVYLENGFAYVPRDELVSLVSNEFRMQLSRALAMTARALPYLEEDDRLLPKLTNLSRQYVGQDYTQKRSTGA-------KVTLDQIDSLSKSSYPLCMRQLHTAMKEHHHLKHFGRLQYGLFIKGIGLSLEEALIFWRSEFTKVMDVDKFDKQ-YSYNIRHSYGKEGKRQDYTPYSCMKIIMTNPPGPGDHHGCPF 393
BLAST of mRNA_S-ischiensis_contig11.1984.1 vs. uniprot
Match: UPI00077A9758 (DNA primase large subunit-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A9758) HSP 1 Score: 174 bits (442), Expect = 3.850e-44 Identity = 136/427 (31.85%), Postives = 197/427 (46.14%), Query Frame = 1
Query: 187 MYVERPTDDVTLDEFVSSAVSRLGLFMQL-TDG----------------KAGPALGASHAQQS----------RLDTIGHFVLRLACCRKRGLAHWFVQMEKELFNARLKRHLSTDTELGHLSQSRCTAIPEIYHLEWLTPVDSVAVEGDERLRRGLEDTLGTDMSSVAAFPDTLGAGALPRGAGEHTEREEASSCSPGLSLRPGPNDGSGDTPVAFRCPFRHALELVRARRAYLVGGFAYVSVRQLPEVATEHFGGVLVSALDVASRALPGVERDERVQEALEEIRRKI--KEVREPRPSGGLRAWARGPVTRANLEVLANRHFPLCMREMLGALRRDHRLKHDGRLQLLLFLKGCGMEVEEALELWREEFRQVMSAQEYQKKRYEYTVRHLYGLEGKMHNKAPYTCGQIMRSAPPGPGQVHGCPF 1380
MY PT ++TL+EF A++RL + ++ T G L SH Q S D I HF+LRLA CR L WF+ E ELF R +L ++ + L++ TP+ ++E E+ LE + G ++ HT+ F+ PF AL+LVR R+ YL GFAYV +L + + F L AL + +RALP +E D+R+ L + R+ ++ + R +G VT ++ L+ +PLCMR++ AL+ H LKH GRLQ LF+KG G+ +EEAL WR EF +VM ++ K+ Y Y +RH YG EGK + PY+C +I+ + PPGPG HGCPF
Sbjct: 55 MYKVPPTGNITLEEFEEFAIARLKVLREIETLGIRFSRSTKDYEDAMMESLKKFLPRSHKQYSGQSENADKERTKDHISHFILRLAYCRSEDLRRWFLSQEVELFRFRF-------ADLAKINSQQADGFLRNNGLKY-TPI---SIEEREKRVMDLEHS-GFKLAHEKVL---------------HTDY--------------------------FKVPFADALDLVRGRKVYLENGFAYVPRDELVSLVSNEFRMQLSRALAMTARALPYLEEDDRLLPMLTNLSRQYLGQDYTQKRSTGA-------KVTLDQIDSLSKSSYPLCMRQLHTALKEHHHLKHFGRLQYGLFIKGIGLSLEEALIFWRSEFTKVMDVDKFDKQ-YSYNIRHSYGKEGKRQDYTPYSCMKIIMTNPPGPGDHHGCPF 420
BLAST of mRNA_S-ischiensis_contig11.1984.1 vs. uniprot
Match: K1QG59_CRAGI (DNA primase large subunit n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QG59_CRAGI) HSP 1 Score: 172 bits (437), Expect = 5.750e-44 Identity = 124/423 (29.31%), Postives = 185/423 (43.74%), Query Frame = 1
Query: 187 MYVERPTDDVTLDEFVSSAVSRLGLFMQLTDGKAGPALGA-------------------------SHAQQSRLDTIGHFVLRLACCRKRGLAHWFVQMEKELFNARLKRHLSTDTELGHLSQSRCTAIPEIYHLEWLTPVDSVAVEGDERLRRGLEDTLGTDMSSVAAFPDTLGAGALPRGAGEHTEREEASSCSPGLSLRPGPNDGSGDTPVAFRCPFRHALELVRARRAYLVGGFAYVSVRQLPEVATEHFGGVLVSALDVASRALPGVERDERVQEALEEIRRKIKEVREPRPSGGLRAWARGPVTRANLEVLANRHFPLCMREMLGALRRDHRLKHDGRLQLLLFLKGCGMEVEEALELWREEFRQVMSAQEYQKKRYEYTVRHLYGLEGKMHNKAPYTCGQIMRSAPPGPGQVHGCPF 1380
+Y P D VTL EF AV RL + + + G+ + +++ R+D I HF+LRLA CR L WF+Q E +LF R + + + ++ L++ P+ D+ +R L+D L G N + DT F+ PF L+LVR R+ +L GFAYV + + H+ L L + SRALP +E D R+ L + ++ + G +T ++ L+ + FP CM+ + +++RDH LKH GR+Q LFLKG G+ +EEAL WR EF + M ++ K+ Y Y +RH YG EGK + PY+C +I+ S PGPG HGCPF
Sbjct: 26 IYKVPPKDTVTLQEFEEYAVERLKVLKAIENAGIRHIRGSEDYNTLVEKEIKKTRLAKIIRTDYSTDSEEYRIDHISHFILRLAYCRSEDLKRWFLQQELDLFRFRFLMETAEEKQ----------KFLKVNSLDY-NPIS------DDEKQRVLQD----------------------------------------LMASAGRNSTTADTNEYFKVPFTEVLDLVRGRKVFLSRGFAYVPKDDMISILITHYRAHLSQQLAMTSRALPQLEEDNRLLPMLSGLSKRYLGQDYSSKKSNV-----GKITAEMIDSLSKQSFPPCMQNLHQSMKRDHHLKHGGRMQYGLFLKGIGLSLEEALRFWRTEFTKAMDGDKFDKQ-YSYNIRHNYGKEGKRADYTPYSCNKIIMSNAPGPGDNHGCPF 385
BLAST of mRNA_S-ischiensis_contig11.1984.1 vs. uniprot
Match: UPI00145844C8 (DNA primase large subunit-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145844C8) HSP 1 Score: 171 bits (432), Expect = 2.530e-43 Identity = 127/423 (30.02%), Postives = 186/423 (43.97%), Query Frame = 1
Query: 202 PTDDVTLDEFVSSAVSRLGLFMQL-TDG---------------------KAGPALGASHAQQS---RLDTIGHFVLRLACCRKRGLAHWFVQMEKELFNARLKRHLSTDTELGHLSQSRCTAIPEIYHLEWLTPVDSVAVEGDERLRRGLEDTLGTDMSSVAAFPDTLGAGALPRGAGEHTEREEASSCSPGLSLRPGPNDGSGDTPVAFRCPFRHALELVRARRAYLVGGFAYVSVRQLPEVATEHFGGVLVSALDVASRALPGVERDERVQEALEEIRRKI--KEVREPRPSGGLRAWARGPVTRANLEVLANRHFPLCMREMLGALRRDHRLKHDGRLQLLLFLKGCGMEVEEALELWREEFRQVMSAQEYQKKRYEYTVRHLYGLEGKMHNKAPYTCGQIMRSAPPGPGQVHGCPFMRC 1389
PTD ++L EF AV RL + L T G K GP L + RLD I HF+LRLA CR L WF+Q E EL R +R E E + L++ + S ++ +E +P L G N T F+ PF L+L+ R+ +L GFAYV + + H+ L +L V RALP +E D+R+ + + ++ K+ + + G +T +E+L+ + FP+CM+++ ++RRDH L+H GR Q LFLKG G+ +EEA+ WR+EF +++ ++ K Y Y +RH YG EGK N PY+C +I+ S PG G HGCPF C
Sbjct: 70 PTDTISLQEFEEYAVERLKVLKALDTAGVRHIRGSEKYTELVEKEIKKTKFGPILRTDRREDEFLRRLDHISHFILRLAYCRSEELRRWFLQQELELLRLRFQR------------------------------------ETPESRQEFLQEN-NLNYSPIS--------------------EDEKRDITPELIAAAGRNSSQAHTQEYFKVPFVEVLDLISKRKVFLSEGFAYVPREDMISILLTHYRAHLSHSLAVTCRALPHLEEDDRLLPMVCGLSKRYVGKDYTSKKTNVG-------QITADMVEMLSKQSFPMCMQQLHESMRRDHHLRHGGRQQYGLFLKGIGLSLEEAMTFWRKEFTKLIDGDKFDKN-YSYNIRHNYGKEGKRANYTPYSCMKIIMSNAPGQGDFHGCPFKHC 427
BLAST of mRNA_S-ischiensis_contig11.1984.1 vs. uniprot
Match: UPI001B88B816 (DNA primase large subunit-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B816) HSP 1 Score: 171 bits (434), Expect = 3.900e-43 Identity = 145/480 (30.21%), Postives = 202/480 (42.08%), Query Frame = 1
Query: 190 YVERPTDDVTLDEFVSSAVSRLGLFMQLTDGKAGPALGASHAQQS-----------------------------------RLDTIGHFVLRLACCRKRGLAHWFVQMEKELFNAR-LKRHLSTDTELGHLSQSRCTAIPEIYHLEWLTPVDSVAVEGDERLRRGLEDTLGTDMSSVAAFPDTLGAGALPRGAGEHTEREEASSCSPGLSLRPGPNDGSGDTPVAFRCPFRHALELVRARRAYLVGGFAYVSVRQLPEVATEHFGGVLVSALDVASRALPGVERDERVQEALEEIRRKIKEVREPRPSGGLRAWARGPVTRANLEVLANRHFPLCMREMLGALRRDHRLKHDGRLQLLLFLKGCGMEVEEALELWREEFRQVMSAQEYQKKRYEYTVRHLYGLEGKMHNKAPYTCGQIMRSAPPGPGQVHGCPFMRCASSGAASADAGAAAAVDGEPLRPLLCASGARSGDIEDILAALSG 1521
Y + PT+ ++L EF A+ RL + KA +G H + S RLD I HF+LRLA CR L WF+Q E +LF R L+ T L+ T IPE E DE L GL + A PD TE E F+ PF AL+LVRAR+ +L G+AYV L + + L AL + RALP +E D+R+ L + ++ R G VT L++L + +PLCM+E+ ++R +H L+H GR Q LFLKG G+ ++EA++ WR EF +++ ++ K+ Y Y +RH YG EGK N PY+C +I+ S PPGPG HGCPF C D E L+ L + G ++E I G
Sbjct: 29 YSKPPTETISLQEFEEFAIERLKVL------KAIETIGIRHLRGSDNYNEALEKEIKKTKFRSILKVSKEDVSEDEVQVRRLDHISHFILRLAYCRSEELRRWFLQQELDLFRYRFLRESAETSQTFMKLNNLNYTPIPE--------------KEKDEVLD-GLRN----------ARPDKTA----------KTELTEF-----------------------FKVPFTEALDLVRARKVFLQQGYAYVPRDDLISILLSVYRTHLSHALALTCRALPHLEEDDRLLPMLCGLSKRYLG-----QDYANRKSVVGEVTADMLDMLCKKSYPLCMQELHQSVRSNHHLRHGGRQQYGLFLKGIGLSLDEAMKFWRTEFTKLLDVDKFDKQ-YSYNIRHNYGKEGKRTNYTPYSCMKIIMSNPPGPGDAHGCPFRHC----------------DSELLKQKLRSRGLSKDEVEQITNEAKG 422
BLAST of mRNA_S-ischiensis_contig11.1984.1 vs. uniprot
Match: UPI000A2A7032 (DNA primase large subunit isoform X1 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7032) HSP 1 Score: 171 bits (433), Expect = 3.980e-43 Identity = 127/428 (29.67%), Postives = 186/428 (43.46%), Query Frame = 1
Query: 187 MYVERPTDDVTLDEFVSSAVSRLGLFMQLTDG------------------------------KAGPALGASHAQQSRLDTIGHFVLRLACCRKRGLAHWFVQMEKELFNARLKRHLSTDTELGHLSQSRCTAIPEIYHLEWLTPVDSVAVEGDERLRRGLEDTLGTDMSSVAAFPDTLGAGALPRGAGEHTEREEASSCSPGLSLRPGPNDGSGDTPVAFRCPFRHALELVRARRAYLVGGFAYVSVRQLPEVATEHFGGVLVSALDVASRALPGVERDERVQEALEEIRRKIKEVREPRPSGGLRAWARGPVTRANLEVLANRHFPLCMREMLGALRRDHRLKHDGRLQLLLFLKGCGMEVEEALELWREEFRQVMSAQEYQKKRYEYTVRHLYGLEGKMHNKAPYTCGQIMRSAPPGPGQVHGCPF 1380
MY PTD+++L+EF A+ RL + ++ K G + R D I HF+LRLA CR L WF+ E ELF R E R+ ++ L + S + E E++ C N S ++ PF AL+LVR+R+ YL GG+AYV L + + F L AL + +RALP +E DER+ L + R+ + G ++ A G +T ++++A + FPLCMR + +LR H LKH GR+Q LFLKG G+ +EE+L WR EF ++M ++ K+ Y Y +RH YG EGK + P++C +I+ S PGPG HGCP+
Sbjct: 27 MYKIPPTDNISLEEFEELAIERLKVLREVESNSIRYKKDDKAYQNKSHDLLKSFLPQNYDVSKGGSNDPNQEYDERRKDHISHFILRLAYCRSEELRRWFLSQEVELFRIRFS----------------------------------------EEQRKDVDTFLENNKLSYSDIG----------------EEEKSEKCCQLRDAGYNLNVQSVKADEYYKVPFIEALDLVRSRKVYLEGGYAYVPRGDLSSIISNVFRTHLSHALALTARALPYLEEDERLLPRLNNLSRQYV----GQDYGTKKSIAGGKITLDQIDMVARKSFPLCMRNLHQSLREAHHLKHGGRMQYGLFLKGIGITLEESLIFWRSEFGKIMELDKFDKQ-YAYNIRHNYGKEGKRADYTPFSCMKIIMSNQPGPGDCHGCPY 393
BLAST of mRNA_S-ischiensis_contig11.1984.1 vs. uniprot
Match: A0A5A8CXS7_CAFRO (DNA primase large subunit n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CXS7_CAFRO) HSP 1 Score: 170 bits (431), Expect = 6.480e-43 Identity = 143/464 (30.82%), Postives = 202/464 (43.53%), Query Frame = 1
Query: 187 MYVERPTDDVTLDEFVSSAVSRLGLFMQLTDGKAGPA----------------LGASHAQQS--RLDTIGHFVLRLACCRKRGLAHWFVQMEKELFNARLKRHLSTDTELGHLSQSRCTAIPEIYHLEWLTPVDSVAVEGDERLRRGLEDTLGTDMSSVAAFPDTLGAGALPRGAGEHTEREEASSCSPGLSLRPGPNDGSGDTPVAFRCPFRHALELVRARRAYLVGGFAYVSVRQLPEVATEHFGGVLVSALDVASRALPGVERDERVQEALEEIRRKIKEVREPRPSGGLRAWARGPVTRANLEVLANRHFPLCMREMLGALRRDHRLKHDGRLQLLLFLKGCGMEVEEALELWREEFRQVMSAQEYQKKRYEYTVRHLYGLEGKMHNKAPYTCGQIMRSAPPGPGQVHGCPFMRCASSGAASADAGAAAAVDGEPLRPLLCASGARSGDIEDILAALSGR 1524
MY ++PT ++TL +F A++RL + + KA A LG + R D I H +LRLA C+ WF+ E LF RL++ S + + +S + ++ + E E L R L T M + + D AG L PV F+ PF ALELV +RRA + GGFAYV +L + F L L AS+ALP V RDER+ L + + + G L A V + LA FPLCM + AL LKH+GR+Q LFLKG G+ +EEA+ W+ F + M+A+E+ K RY Y +RH YG EGK N PY+C +I+ PPG G+VHGCP+ D +R L + G +E ++A++ R
Sbjct: 25 MYEQQPTTELTLYDFEVVALNRLRVLKAIETAKAKTAKPEELDALLKVQTNKHLGGKLLTEEARRNDAISHHILRLAYCQSEEKRRWFIAQETALFRWRLQKQ-SAEQVADFMRKSDMS-------------LEQIDDEERETLARDLAAVWAT-MKTTSGVTDAEWAGRLAH------------------------------EPV-FKVPFTQALELVASRRALVRGGFAYVPRERLTHIIVGRFRTRLSLGLVQASKALPAVLRDERLGPVLGNMSKAYLGPQYGEQGGAL---AGAQVRAVEVAGLAGTSFPLCMSALQSALSGASHLKHEGRMQYGLFLKGIGLGLEEAMVFWQGHFTKKMTAEEFVK-RYAYNIRHNYGKEGKRANYTPYSCVRIIMGTPPGAGEVHGCPYRHW----------------DPTNVRKALVSRGLSGAQVERVMASVKER 422
BLAST of mRNA_S-ischiensis_contig11.1984.1 vs. uniprot
Match: A0A7K7ANX0_9AVES (DNA primase large subunit (Fragment) n=3 Tax=Nothoprocta TaxID=8806 RepID=A0A7K7ANX0_9AVES) HSP 1 Score: 169 bits (429), Expect = 1.130e-42 Identity = 131/429 (30.54%), Postives = 187/429 (43.59%), Query Frame = 1
Query: 190 YVERPTDDVTLDEFVSSAVSRLGLFMQLTDGKAGPALGASHAQQS-----------------------------RLDTIGHFVLRLACCRKRGLAHWFVQMEKELFNARLKRHLSTDTELGHLSQSRCTAIPEIYHLEWLTPVDSVAVEGDERLRRGLEDTLGTDMSSVAAFPDTLGAGALPRGAGEHTEREEASSCSPGLSLRPGPNDGSGDTPVAFRCPFRHALELVRARRAYLVGGFAYVSVRQLPEVATEHFGGVLVSALDVASRALPGVERDERVQEALEEIRRKIKEVREPRPSGGLRAWARGPVTRANLEVLANRHFPLCMREMLGALRRDHRLKHDGRLQLLLFLKGCGMEVEEALELWREEFRQVMSAQEYQKKRYEYTVRHLYGLEGKMHNKAPYTCGQIMRSAPPGPGQVHGCPFMRC 1389
Y+E PT++++L EF S AV RL L K LG SH + R D I HF+LRLA C+ L WF+Q E +LF R + LS L H E ++ E L+ D L PGLS+ + ++ A+EL RARR ++ GFAYV V+ + + ++ L AL + +RALP ++ DER+Q L + P ++ A G ++ ++ LA + FPLCMR++ ALR H L+H GR+Q LFLKG G+ +E+ALE W++EF Q + K Y Y++RH YG EGK + PY+C +I+ + PP G HGCPF C
Sbjct: 23 YLEPPTENISLAEFESLAVDRLRLL------KVVENLGVSHVRNGDTYKAKLEQELRKLKFPYRALAEGDYDARRKDHISHFILRLAYCQSEELRRWFLQQEMDLFRYRFNQ-LSAGLRQKFLDHVNL-------HFEAIS----------EELKNKWADDLCAST--------------------------------PGLSMI------KVKEQMFYKVGLVDAVELFRARRVFIKDGFAYVPVKDIDAIVLNNYRAKLSKALALTARALPSIQSDERLQPLLNHLSHSY-----IGPDYSVQKNA-GKISLEQIDALAVKSFPLCMRQLHKALRESHHLRHGGRMQYGLFLKGIGLTLEQALEFWKKEFIQGKVDADKFDKGYAYSIRHNYGKEGKRKDYTPYSCMKIIMTNPPSQGDYHGCPFRHC 383 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.1984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.1984.1 >prot_S-ischiensis_contig11.1984.1 ID=prot_S-ischiensis_contig11.1984.1|Name=mRNA_S-ischiensis_contig11.1984.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=571bp CRGDWRCWDSGQCAEAIFRAGPRDGGGRHLALGQLGDTAAVRGLAPGSAPback to top mRNA from alignment at S-ischiensis_contig11:215243..221000- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.1984.1 ID=mRNA_S-ischiensis_contig11.1984.1|Name=mRNA_S-ischiensis_contig11.1984.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5758bp|location=Sequence derived from alignment at S-ischiensis_contig11:215243..221000- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:215243..221000- >mRNA_S-ischiensis_contig11.1984.1 ID=mRNA_S-ischiensis_contig11.1984.1|Name=mRNA_S-ischiensis_contig11.1984.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3426bp|location=Sequence derived from alignment at S-ischiensis_contig11:215243..221000- (Schizocladia ischiensis KU_0333)back to top |