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|
Homology
BLAST of mRNA_S-ischiensis_contig11.1972.1 vs. uniprot
Match: D8LTG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTG6_ECTSI) HSP 1 Score: 228 bits (582), Expect = 3.750e-75 Identity = 110/135 (81.48%), Postives = 125/135 (92.59%), Query Frame = 1
Query: 1 MAGVQPLSRPKIVKKRTKKFARHQSDRFMRIKNSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSDAKTRNLLPNGFYKFLVHNIKELELLMMHNSRKYCAEIAHNVSTRKRKEIVERAAELHVRVTNAGAKLQTEE 405
M GVQPL++ +VKKRTKKFARHQ+DRFMRIKNSSWR+PKGIDGRVRR+FKG +PMPN+GYGSD +TRN+LPNGFYKFLVHN+KELELL+MHN RKY AEIAHNVS+RKRKEIVERA +LH+RVTNAGAKL EE
Sbjct: 1 MGGVQPLNKVNVVKKRTKKFARHQTDRFMRIKNSSWRKPKGIDGRVRRRFKGCLPMPNVGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHN-RKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEE 134
BLAST of mRNA_S-ischiensis_contig11.1972.1 vs. uniprot
Match: A0A835YGQ7_9STRA (Ribosomal protein L32e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGQ7_9STRA) HSP 1 Score: 220 bits (561), Expect = 5.960e-72 Identity = 109/135 (80.74%), Postives = 125/135 (92.59%), Query Frame = 1
Query: 1 MAGVQPLSRPKIVKKRTKKFARHQSDRFMRIKNSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSDAKTRNLLPNGFYKFLVHNIKELELLMMHNSRKYCAEIAHNVSTRKRKEIVERAAELHVRVTNAGAKLQTEE 405
MA +PL +P +VKKRTKKFARHQS+RF+RI+NSSWRRPKGIDGRVRRKFKGAIPMPNIGYGS+ KTRN+LPNGFYKFLVHN+K+LELLMMHN RKY AEIAHNVS RKRKEIVERA++L ++VTNA A+L+TEE
Sbjct: 1 MAAPKPLPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHN-RKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEE 134
BLAST of mRNA_S-ischiensis_contig11.1972.1 vs. uniprot
Match: A0A6S9KJY2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KJY2_HETAK) HSP 1 Score: 204 bits (520), Expect = 1.050e-65 Identity = 102/135 (75.56%), Postives = 118/135 (87.41%), Query Frame = 1
Query: 1 MAGVQPLSRPKIVKKRTKKFARHQSDRFMRIKNSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSDAKTRNLLPNGFYKFLVHNIKELELLMMHNSRKYCAEIAHNVSTRKRKEIVERAAELHVRVTNAGAKLQTEE 405
MA + PLS+PKIVKKRTKKFARHQSD+FMRI SSWR+PKGID RVRR+FKG IPMP IGYGS+ KTRN+LPNGF KFLV+N+ ELELLMMHN RKYCAEIAHNVS +KRK+IV RA +L +RVTNA A+L+ +E
Sbjct: 1 MAKITPLSKPKIVKKRTKKFARHQSDQFMRIGKSSWRKPKGIDSRVRRRFKGTIPMPKIGYGSNKKTRNVLPNGFLKFLVNNVAELELLMMHN-RKYCAEIAHNVSAKKRKDIVTRAEQLGIRVTNANARLEAQE 134
BLAST of mRNA_S-ischiensis_contig11.1972.1 vs. uniprot
Match: A0A7S2B874_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B874_9STRA) HSP 1 Score: 199 bits (505), Expect = 3.780e-63 Identity = 101/136 (74.26%), Postives = 119/136 (87.50%), Query Frame = 1
Query: 1 MAGVQPLSRPK-IVKKRTKKFARHQSDRFMRIKNSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSDAKTRNLLPNGFYKFLVHNIKELELLMMHNSRKYCAEIAHNVSTRKRKEIVERAAELHVRVTNAGAKLQTEE 405
M V PL +PK IVKKRTKKFARH S+RFMRI+NSSWR+PKGID VRR+FKG IPM IGYGSD KTRNL+PNGFYKF V N+ +LE+LMMHN RKYCAEIAHNVST+KRKEIVERAA+L+++V+NA AKL+++E
Sbjct: 19 MVKVTPLVKPKKIVKKRTKKFARHFSNRFMRIENSSWRKPKGIDSSVRRRFKGTIPMAKIGYGSDKKTRNLMPNGFYKFAVSNVDQLEMLMMHN-RKYCAEIAHNVSTKKRKEIVERAAQLNIKVSNANAKLRSDE 153
BLAST of mRNA_S-ischiensis_contig11.1972.1 vs. uniprot
Match: A0A7S2XAB1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XAB1_9EUKA) HSP 1 Score: 194 bits (494), Expect = 5.750e-62 Identity = 97/119 (81.51%), Postives = 108/119 (90.76%), Query Frame = 1
Query: 49 TKKFARHQSDRFMRIKNSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSDAKTRNLLPNGFYKFLVHNIKELELLMMHNSRKYCAEIAHNVSTRKRKEIVERAAELHVRVTNAGAKLQTEE 405
TKKFARHQSDRF RI +SSWRRPKGID RVRRKFKGAIPM N+GYGS+ KTRNLLPNGFYKFLVHN+KELELLMMHN RKYCAE+AH VS++KRKEIVERA +L ++VTNA AKL+ EE
Sbjct: 1 TKKFARHQSDRFKRIADSSWRRPKGIDSRVRRKFKGAIPMANVGYGSNKKTRNLLPNGFYKFLVHNVKELELLMMHN-RKYCAEVAHAVSSKKRKEIVERADQLGIKVTNANAKLRAEE 118
BLAST of mRNA_S-ischiensis_contig11.1972.1 vs. uniprot
Match: A0A7S2AJK5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJK5_9STRA) HSP 1 Score: 193 bits (491), Expect = 2.670e-61 Identity = 96/134 (71.64%), Postives = 114/134 (85.07%), Query Frame = 1
Query: 10 VQPLSRPKIVKKRTKKFARHQSDRFMRIKNSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSDAKTRNLLPNGFYKFLVHNIKELELLMMHNSRKYCAEIAHNVSTRKRKEIVERAAELHVRVTNAGAKLQTEEKS 411
+ P+ +PKI+KKR+KKFARH S+RFMRIKNS+WR+PKGID VRR+FKG IPM IGYGSD +TRN LPNGF KFLV N+ +LELLMMHN +KYCAEIAHNVS++KRKEIVERA ELH++VTN AKL+ E S
Sbjct: 3 ITPMVKPKIIKKRSKKFARHFSNRFMRIKNSNWRKPKGIDSSVRRRFKGTIPMVKIGYGSDKRTRNTLPNGFLKFLVSNVAQLELLMMHN-KKYCAEIAHNVSSKKRKEIVERAQELHIKVTNHHAKLRENEDS 135
BLAST of mRNA_S-ischiensis_contig11.1972.1 vs. uniprot
Match: W7T4V3_9STRA (Ribosomal protein l32 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4V3_9STRA) HSP 1 Score: 192 bits (489), Expect = 5.750e-61 Identity = 101/136 (74.26%), Postives = 117/136 (86.03%), Query Frame = 1
Query: 1 MAGVQPLSRPK-IVKKRTKKFARHQSDRFMRIKNSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSDAKTRNLLPNGFYKFLVHNIKELELLMMHNSRKYCAEIAHNVSTRKRKEIVERAAELHVRVTNAGAKLQTEE 405
MA V PL +PK IVKKRTKKF R Q+DRFMRI +SWR+PKGIDGR RR+FKG+ MPNIGYGSDAKTRNLLPNGFYKF+V+N KE+ELL++HN RKY AEIAHNVS+RKRK IVE+A +L V+VTNA AKL+ EE
Sbjct: 1 MAKVTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHN-RKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEE 135
BLAST of mRNA_S-ischiensis_contig11.1972.1 vs. uniprot
Match: A0A7S2SH78_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH78_9STRA) HSP 1 Score: 190 bits (483), Expect = 4.560e-60 Identity = 93/135 (68.89%), Postives = 113/135 (83.70%), Query Frame = 1
Query: 1 MAGVQPLSRPKIVKKRTKKFARHQSDRFMRIKNSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSDAKTRNLLPNGFYKFLVHNIKELELLMMHNSRKYCAEIAHNVSTRKRKEIVERAAELHVRVTNAGAKLQTEE 405
M PL++PK+VKKRTKKF RH S+RFMRI +SWR+P GID +RR+FKG++P P +GYGSD +TRNLLPNGFYKFLV N+++LELLMMHN RKYCAEIAHNVST KR+EIV RA +L ++VTNA AKL+ EE
Sbjct: 1 MVKTTPLTKPKVVKKRTKKFVRHFSNRFMRISRTSWRKPMGIDSSMRRRFKGSLPQPKVGYGSDKRTRNLLPNGFYKFLVSNVEDLELLMMHN-RKYCAEIAHNVSTLKRQEIVTRANQLAIKVTNANAKLREEE 134
BLAST of mRNA_S-ischiensis_contig11.1972.1 vs. uniprot
Match: M4C135_HYAAE (Uncharacterized protein n=12 Tax=Oomycota TaxID=4762 RepID=M4C135_HYAAE) HSP 1 Score: 191 bits (485), Expect = 5.080e-60 Identity = 97/135 (71.85%), Postives = 115/135 (85.19%), Query Frame = 1
Query: 1 MAGVQPLSRPKIVKKRTKKFARHQSDRFMRIKNSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSDAKTRNLLPNGFYKFLVHNIKELELLMMHNSRKYCAEIAHNVSTRKRKEIVERAAELHVRVTNAGAKLQTEE 405
M V P+ RPKIVKKR KF RHQS+RF R+ S WRRPKGIDGRVRRKFKGAI MPN+GYGS+ KTR+LLPNGFYKF+V+N+ ELE+L+MHN RKYCAEIAHNVS RKR+EI+ERA +L+VRVTN A+++ EE
Sbjct: 1 MVQVTPVVRPKIVKKRVTKFKRHQSNRFKRVPES-WRRPKGIDGRVRRKFKGAIKMPNVGYGSNKKTRHLLPNGFYKFVVNNVAELEVLLMHN-RKYCAEIAHNVSGRKRREIIERAEQLNVRVTNPDARVRAEE 133
BLAST of mRNA_S-ischiensis_contig11.1972.1 vs. uniprot
Match: A0A7S2R0A8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0A8_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.860e-59 Identity = 94/135 (69.63%), Postives = 115/135 (85.19%), Query Frame = 1
Query: 1 MAGVQPLSRPKIVKKRTKKFARHQSDRFMRIKNSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSDAKTRNLLPNGFYKFLVHNIKELELLMMHNSRKYCAEIAHNVSTRKRKEIVERAAELHVRVTNAGAKLQTEE 405
M GV PL++ IVKKRTKKFARHQSD F+RI++SSWR+PKGIDGRVRR+FKGA+PMP+IGYGSD KTRN+ PNGF +V N+ +LE+LMMHN R YCA IAH+VS++ R+ IVERAA+L +RV NAGAKL+ EE
Sbjct: 1 MTGVAPLNKKTIVKKRTKKFARHQSDLFIRIRDSSWRKPKGIDGRVRRRFKGAVPMPSIGYGSDKKTRNVCPNGFKLVVVANVSDLEMLMMHN-RTYCATIAHSVSSKVRRAIVERAAQLAIRVNNAGAKLRAEE 134
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 229.2 |
| Seed ortholog evalue | 1.2e-57 |
| Seed eggNOG ortholog | 2880.D8LTG6 |
| Preferred name | RPL32 |
| KEGG ko | ko:K02912,ko:K03132,ko:K04805,ko:K06990,ko:K09329,ko:K09503,ko:K17593,ko:K17822 |
| KEGG TC | 1.A.9.1 |
| KEGG Pathway | ko03010,ko03022,ko04080,ko04141,ko04725,map03010,map03022,map04080,map04141,map04725 |
| KEGG Module | M00177,M00179 |
| GOs | GO:0000184,GO:0000956,GO:0001889,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0005844,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009410,GO:0009719,GO:0009725,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0012505,GO:0014070,GO:0015031,GO:0015833,GO:0015934,GO:0016020,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019538,GO:0022625,GO:0022626,GO:0030867,GO:0031090,GO:0031099,GO:0031100,GO:0031960,GO:0031974,GO:0031981,GO:0031984,GO:0032501,GO:0032502,GO:0032870,GO:0032991,GO:0033036,GO:0033365,GO:0033993,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0035690,GO:0042175,GO:0042221,GO:0042493,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048513,GO:0048519,GO:0048545,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051384,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0061008,GO:0065007,GO:0070013,GO:0070727,GO:0070887,GO:0070972,GO:0071310,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097327,GO:0097421,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098827,GO:1901360,GO:1901361,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1990904 |
| EggNOG free text desc. | 60s ribosomal protein |
| EggNOG OGs | COG1717@1,KOG0878@2759 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01610,ko00000,ko00001,ko00002,ko01009,ko03000,ko03011,ko03021,ko03029,ko03036,ko03110,ko04040,ko04121,ko04812 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Ribosomal protein L32e |
| Ec32 ortholog | Ec-02_005540.1 |
| Exons | 3 |
| Model size | 414 |
| Cds size | 414 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815586.366729-CDS-S-ischiensis_contig11:134188..134372 | 1622815586.366729-CDS-S-ischiensis_contig11:134188..134372 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 134189..134372 + |
| 1695739786.0856729-CDS-S-ischiensis_contig11:134188..134372 | 1695739786.0856729-CDS-S-ischiensis_contig11:134188..134372 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 134189..134372 + |
| 1622815586.380261-CDS-S-ischiensis_contig11:137986..138083 | 1622815586.380261-CDS-S-ischiensis_contig11:137986..138083 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 137987..138083 + |
| 1695739786.0973945-CDS-S-ischiensis_contig11:137986..138083 | 1695739786.0973945-CDS-S-ischiensis_contig11:137986..138083 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 137987..138083 + |
| 1622815586.390196-CDS-S-ischiensis_contig11:141574..141707 | 1622815586.390196-CDS-S-ischiensis_contig11:141574..141707 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 141575..141707 + |
| 1695739786.11559-CDS-S-ischiensis_contig11:141574..141707 | 1695739786.11559-CDS-S-ischiensis_contig11:141574..141707 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 141575..141707 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.1972.1 >prot_S-ischiensis_contig11.1972.1 ID=prot_S-ischiensis_contig11.1972.1|Name=mRNA_S-ischiensis_contig11.1972.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=138bp
MAGVQPLSRPKIVKKRTKKFARHQSDRFMRIKNSSWRRPKGIDGRVRRKF
KGAIPMPNIGYGSDAKTRNLLPNGFYKFLVHNIKELELLMMHNSRKYCAE
IAHNVSTRKRKEIVERAAELHVRVTNAGAKLQTEEKS* back to topmRNA from alignment at S-ischiensis_contig11:134189..141707+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig11.1972.1 ID=mRNA_S-ischiensis_contig11.1972.1|Name=mRNA_S-ischiensis_contig11.1972.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7519bp|location=Sequence derived from alignment at S-ischiensis_contig11:134189..141707+ (Schizocladia ischiensis KU_0333)
ATGGCCGGTGTCCAGCCCCTCTCGCGGCCCAAAATAGTGAAGAAGAGGAC
GAAGAAGTTCGCCCGCCACCAGAGCGACCGGTTCATGCGGATCAAGAACT
CGAGCTGGCGGAGGCCCAAGGGTATCGATGGGCGCGTACGCAGGAAGTTC
AAGGGGGCCATCCCCATGCCCAACATCGGTTACGGTGAGTCACTTTCTTG
TGCCTGCTCCGAGAGAGTGTCTGGAGGGTGGGAACCTGGTTTCGTCGCAT
GTGTGCTTGCGCGACGACGGCGGCACCCAGCTGTAGCATGGACATCGCGA
GGCTCGCGCCTCAGCACCCAAAATAGGGCGCCTTAGTAACACTACAGTAG
GTAGCACTGGGGATCTCTGCACCCCAGCCCCCCTGGGCGCCTGGCTTGGA
GGAGCTTGGTTGGGAAGGGTGTGGTTGTATCAGGGTTGCAAGGCATTGGC
ACTGCTGGCTGCCTTGGGCTCTGGACGCTGGTTCATCTGTTATTATGGAG
GGCGCTTGAGCATGCGTCTTAAGCGGTTGCTAAGCGCCCCAGCGTGTGTT
TTATATGGCTTTTTTTGCAGGCACTTTTGTGCAGCCTCTGACGGCAGTGG
CGCCGTGTATTCTTTTCGATTCAGGGCCCACTGCACCTTTACTGTTGCAG
CCGGCCACTTGGCGGGAGGAAATTGGTGGTACCCTGCGATGGGTCGACGC
GATGCTTTGTTAAATACAACATCCGTGCTCTTTGCCCGTGGCCACCCTGC
CATGTGTCATGATTTCGAGCCTGGAGAACCCCCAGCATGCTTTCCCCCCC
CTACACACCTGACCGGCGGGGGGGCTGAGTACTTCTCTTTCCCTTCTTCT
TCTTCGTCTTCTTATTCTTGTTCTTCTTCTTTCATCTTTTCCCCGCGCGG
ATTAGGTAACTTAGCGCGTTTGGGTTTTCTGGCTGTTCGTGCTGTCTGTC
TTCACAAAGTGTTTGGCCGTCCTTCTGTGTATACCCCAGTGGCGGTACAA
TACATTGCTGTACTGTAGTACTGGCCAGTACAGTGGTACGAATACTCGTA
TTGAGCAGATATAGCACTGCCTGTAATACAGTGCACTAGCGATATCACAG
TCCCAAGCCGGTTCGTACTGCAAGTATACCGTACATTTTAACGGACAATA
AGGACCCCCCTTTAGTTTACAGCCCCCCCTTGCAAAGCACAACCCACCGT
CGTTAATATTCCGGCTGCCAAACTTAATAACCGGGGATACTGTAGATATC
AACCCCCCAATGTGTCACCGGGCCAGTGCAATGGAAGTTGCTGGCGAGCT
TGATATGAGGCGGGCCCAACGCGCTAGCGCAGCAGCAGCAGCAGCACACA
TTCCACGCTTTGTCAAGCAGCTGGGTTGCAAGGCTCTCGCAGTAGGCGGT
TGTGGCACAGGAGAATGATTTAAGTAGTTCAGGGACCGTGGAGGAGGAAG
AGAGGCCATGGCTTGCAGCGTTTTGGGGGCCGTTGTACAAGTGTCACGTC
TGTCGCCGGCCGCGTCCACCCATATTCCGTAGAGGGTGCTCTTGGGCATC
GCGCCTGCCTCGAGTCGCCCATCGCCCAGGCTCCAGGCCCAAAGCATCGG
CCCACGTAGATATCGAAACCCCACCGGTGATCCGATGTCGCCCCCTTGCC
ACTGAAAATGTTAAGGACCCCCCGCGATGCCGACCTCCTCAAACAATGGC
ATCGGGTCGGCCCTAGCATACCGACCGGGGATGTTAGATACCGTCCCCTA
CGTTGAATACTGACCCGGTCGGTATTCCGGGCGCAAAGAAATATTCTCGA
CATATATATAATTTATCGATATATATATATGCTCCGTCCCGGCCTAGTTG
GGATGCGAGAGTCCATGGCTAAATAGCTACTCCTGTCGGAGGGCAATACC
CGAAGTTTCGACTTACGGCTGTCGGCATTGCACGCACGGTTATGTCGCAC
GACAAGCCAATGAGTACATATATATATAGAGAGAGAGAGTATATGTATCG
ACAATTGTAAGTATTATCGGCCGGGGGTCCTCATCTTCCGCCATGTGCGG
TACGTATGGTAGAGCACATTGGCAATCTCGTAGACCCACGGCCAGTATAG
TGGCACTACAGTACAGCAGTATTAACAGGAGCAACACGGGGCGAGGTGCG
GGGCCACGTCACTAAAGACCTCAGCAGTGGCCCTTCCTTATACCTCGGGA
GATTTGTGTGGGGAAGGAGAGAGGAGGAGGAGGGGGAGGTGTACAGTACA
GCAGCACTCGTACTTGTACTACTGTAGTGGCAGAGTGCTTCCCAAGACAC
TGTTGTACGGTGGTCATGCATGGACCTTTGCGGCCCGCAGCCCTTTCCCC
CCTGGTTCGGCCTGGCGAACGCGCCGCTACCTCTGGCACGGCGTACACTG
TCTCCCGAGGAGGACACTGTGTGTTGGTCCATATGTCACGGGGCGAGCGG
AGCGGGGGGTTGCTGTGCTTGCCTCTTGGGCCTACCTACCTATGTACAAG
CCTGGGCAAGCTAGAAGCTGCAGCGGCGGCGCGGGGGGGGGGGGGACGGA
GACGGGACAAGCCGCGCAGTAGTAGGCGGTGGTGGCGGCTGCAGCAGCGA
CAGTGCGAGAGCTCGCAGGGGGGGTAGACACGTGTGTTGGGCAAACGAGT
GCTCTGCCGGCGCTAGCGCCGCGCGGTTGGCTGGCTTGTGGAGTTCAGGA
TGTGATTCCCGCCCCTGGGGGGAGCGTTGCTGTCGGGGCTTGGCCCGGCC
GGGTCCACACAACATCGGGCGTGCCCGCCCTGACCCACTGTGGTCAGTGC
CGGACACGCTTGGCCCACATCAGCCACCGGCGCTTGTTCGATATATTTGG
TGTGCATGGGCAATGGTCTTGGGACTACGGCAAGCACAACGTGAGTACGT
ATATATACATATATATATATACTCGTATATATATATATATATATATATAT
ATGTGTGTGTGCCGACGGTCGGTGTCATGCACAGGACACGGGGTAACCCG
TTCCGACGTGAGTACATACGTAGTGCTGTCTATTTGTGTGTGTGTGTGCG
TGCGTACTACCACTAGTAGTACGTAGTATATGTATGCATCTCGACCGAGG
CGCGTGGTCAGTGGGCTCGGGACTACGGCAAGCACCACGTGAGTACATGC
AGTATATATATATATATAATGTAGAGCTCTGCATGTGCACACGCGCTTGC
GAGGCCAATGCCATGACACTTTTGTACCACACAGGGCTGGCCGGCGGTCC
AGCAGCATAGAGTGTACTTGTACTGCTACTGACGTCATGCCGTGTCAGTG
CTGTGGTGCGCACTCCACTGTACTGCAAGGAAGGGCCGTTGTTGAGTAGT
GTTGTCATCAGCCTGTTCCAATGTACGTCGAAGTATTACGCTTGCATAGC
ATCCCATACTCTGTTGTTAGTGTTGTCATTAGCCTGTTCCAGTGTACTAC
GAAGTACTCTTACATCACATCCCATCACGTCAATTCAGGTCACACACCAT
AGCAGCCGCACTGCCGGGCCACCATCTGGAGGCAAAAGCGCAAATCGCCA
TCCATGGCAGCCACGAGCGATTGCAGTTTGCGCACGCTTTTTCGACACGC
GGCCTGCGCCTGCCACTGGCCGGCAGCCCAACCGGTGTACGGCCTAGCCT
CTCCTTCATCCGGTTCCTGTCTTTGTCCTTGTTTCTCGATCTCGTCGCCC
CGGCACTTCTTTCGGGCTCCTTCCCCCCCCAGAGGCCCCGGCACCGCCCC
ATGACGTGTGACGTGTTTTTTTCGACGTTTGTGTTGTGCTGCGTACAGGG
TCGGACGCCAAGACACGCAACCTGCTCCCCAACGGCTTCTACAAGTTCCT
GGTGCACAACATCAAGGAGCTGGAGCTTCTCATGATGCACAACAGGTGTG
TGTGTGTGTGTGTGTGTGTGCGCGCGCGCGTGTGCGTGTGTGTGTGAGTG
TGTCTGCTTGGTCAGGCCAAGTAGATGGGTCAGAGTACAGTACATTGAAC
GCTTGCGGGGCCTGCTTTGGGTGTGTCCCTGCTTGATGGTGTTTGTATTT
TAGCACCTCTGCATGAACATTTGCATGTGCTACTACTGCAGTAGTGGTGT
GTACTGTATATACGAAGTACTCGCTAAGTACTCATCGGCTTGTCTTGCGA
CATACTCACACTGTCCTGCCTACTGCTAGAAAGTGTTGGTACTTCCCAGT
AGTGTACAAGTGCTTCACGTACAGGGAAGAACACAGGGCGCAGTGCAGGC
CACGTCAATATCAACAAAAGATAGTTGATAAAAACACAGGGCAAGGTGCA
GGCCACGTCACTAAAGACCTCAACAGTGGCCCTTCCTTAGCTCGCCAAGG
GAGAGGGGGGGAGGCTGTGTGCGGAGAAGGAGGAGGAGGAGAAGGAAGGG
GAGGAAGAGGGAGAGGCCACGTCAGTATTCACTTTACAGTTTGTCAGTAT
TGACACAGTATTAACGGGCCACGTCGTAGTGCTTGTGTGTATAAGCAATA
GTGTACCGTAGTATGTGAGTATTGGTACGAAGTACTTCCAAGTGGTGGGC
AGTACTACAAGTACTGCTCTACTACTGTAGTGCTGTACAGCAGAGAAAGT
AATAATGAAGAGGTGTGCGCAGGCGACGCCCGGTTGACCCGCCGTACCTT
GCAGCACTGTACTTGAAAGCGCCTAGCTTACGTACGGCATGTATTTACTG
TAGTGTCCTCCCAGGCGTCGACGGGTACGTAAAGTTAGTACTCACAACCT
GTACAATGCAGTGGCACAGTACAGTGGGTGAAGAACACACATGCATGAGT
ATGCACTACTGTCCCGTACTGGTACTGTACGTACACGTGTTGAAGTGCAC
ATCACATGATGTCCTAGCACCATGACATCACAGCAGCGACTGCTTGCGGC
AGTACTCTACATAGACGTTCTGGGTCCTATCCACTATACATGTCGCGGAA
GTGGGGGTCTACTCGGCGCACAACAGTGTGTGAGTGCTTTGCTTTGGAGA
AGGGGGAAGACCGTGCGCGGGGATTGGAGGGGTGGAGGGGAGCGGAGGGG
AGGCGGGCAAACGGAACGAGAAGCCGCTTGAGGCGACAAAGGAGGAGGCG
GAGAGGTGTGGGGGAGGAGGAAAGTGCGGAGGGGGGGGGGGCGACAAGCG
AGTGAGAGGGGGTTGAAAGCAAGGATTGGTCCGTCGGCCTCCAATGCACG
ACCCAACAACTGTATACTTGCCGTAGTCCCGAGACCACTTCTACTATGTG
GACACGAGTTGCCTACTGTAGTGTACCAGTAGTGTCCCTTCTGACTTTGA
GATAGCTTTACTACTGTACGTACAAGTAGTGTCCCTTCTGAGTTCTAGAC
TTGTGGATAGCTCTGGGGGCTTTGCGGCCTTCGGCGCGCGTGCTTTCGTT
CGTCGAGGATGGCGATACGTTAGACCGACAGATTTTATTTTTTTTAGTAT
CGGCATCGCGTTTGGGAGTTAGCGTACAATACGAGCATGCCGTGTACTCA
TTGGCCTACTCGAGTACTTGGTACATTACTTACAGTACCTACCGTACTTG
TCTCGCGACTTACGAGACAACCTTGCGCGCTTAGCCGACCGCCCTAAGTT
AAGAGTTTGGGTTGCCGTACGACAGGAGTACCTGTCCTGCCATGGACTCC
CACCTCCTAACTAGGCCGGGACGGAGCATGCCCGGTTTCCACCGGCCAGG
CCGAGTATGCCATGAAGATGTGCTTCGAAGTACCTGGAATTGTACAGCAG
CCGACAAGGGTTGGTCGTGCCTGCTAGGGAGGTGGAGCCAACCCCAGGCC
CCCACCGCAGCTGCGTACAAACGGGGACTGTGGTCCTGTGGGCACTTTCT
TTTGCTTGGGATTTGTGTTTCTGAGCGCCTGCGGGGCAATCGTCTAGCTT
ACAGTAGTTTGACCCAGGGGAGGAGCGTCCTGGGGCGCTCCTCGGTGCTA
CATTGTACTTCGAAGTATCGTGGACTGTGCCGTGCTTGCAAGTGACTAGA
GTGCAGTAGGAACAACTACTAGTACTTAGAAGTAGTACCTAGTGCTTCCG
TACTTGGTACTACAGTAGTGCAATTGCAGTGCACTGTAGTGGAAATGGTA
CAAGCTTTTCTTAAGTTGCAAGCACTCGAGTGCTGGGCGAGCACTTGAGT
GGAGTGCTCGCACTTTGCAGTAGTAGCCCGGCACGGTGCCCTTACTTGAA
CGCACATTGTAGGGGACGACGGCAAGTACACTGCTGCAAGTAGTGGAGCT
GCACTTGTACTGCACTGCTTGCTATGTAGTTCGAAGCACTTAGGGTTCGC
CAGTACAGTAGTGTAGTAGCAAGCTTTGTAGCTGCAGCAGTACGAGTACA
GCAGTGCCGTAGTAGTAGTAGTAGTAGTAGTAATAGTAGTACTCGAGTAG
TAGTAGTAGTAGCAGTAGTAGCAGCAGTAGTAGTAGTAGTAGTAGTAGTA
GGTAGTGGTGACCGTCTTCCTCTAAGGACACCGTAAGTGCTAGTACTACC
GGTAGTACTAGTTGGTAAGCACTGCAGCACCGTACGTTTGCATGGTACTC
CTGCTTGCTGTCTGAACCCCTCGGAACATGGCCCACAGGGGTAGAGTAGA
TAGACCCGCACGGCTTTCTCCCGTCTACAGTTTTGTGCATGAAGATAAAC
AAGCGAGTGGGAAAGAAGAGCTGTTCCTACTTGCGCGAGTTCAGGGCCCC
ACCCCCGGACCCGTGTACAGTTGTATCTGGAGTTGTACCGCAAGGCCACC
ATATTGTAGAAGTACTCGTACTTCAAAGTACAATTGTAGCGGGAAGTTAC
AAGTGTTGCGGGGCGGTGTCGGGACCGCCGGCCTCGTGTGGCCGGGCTAT
ATCGGTAGACACAGCGAGTTGCTGACTTGAGCACGTGCTCCGGACATGCG
CTACACGCGCCGTGTATACGTTCCATTTTTTGTATGTGCTGTCCCCGGTC
TGGCATGAGTGCATACTGTACTGTGCGCTTGTGTGCACTCGCGTCCTGCT
TGCGGCAGTCCCGAGACGACATTGACCCTGTGTGATGTACCCCACACGAG
CGTGTACGTACGGTACTGTACAATGTACTTTCAATGTAGTGACAGTAAGT
ACGTCTGACAGTGATTCACTGTCCCTCGAAGATTGTCTGCTCATATAAGC
CTTCTGTATGCAGTATTAGCAGGAGCAACATGGGGCTTTGTGCGGGCCAC
GTCACTACAGCAGTCGGAAGTAGTAGTGCAGACTACAGAGTGTGTCTACA
GAATATGCCTTGCCGGGCTTCTGAAGCACTCCCTCCGCCTTGCCTACCCC
CCAACCACCTCCTTCCCCTCCCCTTGCCTTCCCCCCTGCTCCTCCTCAAC
CTCTTCGCCCCATCCCCCCCCCCCACCTCCTTGGAGCAGGAAGTACTGCG
CCGAGATTGCCCACAACGTGTCCACGCGCAAGCGCAAGGAGATCGTCGAG
CGGGCCGCGGAGCTGCACGTGCGCGTCACCAACGCCGGCGCCAAGCTGCA
AACCGAGGAGAAGAGCTGA back to topCoding sequence (CDS) from alignment at S-ischiensis_contig11:134189..141707+ >mRNA_S-ischiensis_contig11.1972.1 ID=mRNA_S-ischiensis_contig11.1972.1|Name=mRNA_S-ischiensis_contig11.1972.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=828bp|location=Sequence derived from alignment at S-ischiensis_contig11:134189..141707+ (Schizocladia ischiensis KU_0333)
ATGGCCGGTGTCCAGCCCCTCTCGCGGCCCAAAATAGTGAAGAAGAGGAC
GAAGAAGTTCGCCCGCCACCAGAGCGACCGGTTCATGCGGATCAAGAACT
CGAGCTGGCGGAGGCCCAAGGGTATCGATGGGCGCGTACGCAGGAAGTTC
AAGGGGGCCATCCCCATGCCCAACATCGGTTACGATGGCCGGTGTCCAGC
CCCTCTCGCGGCCCAAAATAGTGAAGAAGAGGACGAAGAAGTTCGCCCGC
CACCAGAGCGACCGGTTCATGCGGATCAAGAACTCGAGCTGGCGGAGGCC
CAAGGGTATCGATGGGCGCGTACGCAGGAAGTTCAAGGGGGCCATCCCCA
TGCCCAACATCGGTTACGGGTCGGACGCCAAGACACGCAACCTGCTCCCC
AACGGCTTCTACAAGTTCCTGGTGCACAACATCAAGGAGCTGGAGCTTCT
CATGATGCACAACAGGGTCGGACGCCAAGACACGCAACCTGCTCCCCAAC
GGCTTCTACAAGTTCCTGGTGCACAACATCAAGGAGCTGGAGCTTCTCAT
GATGCACAACAGCAGGAAGTACTGCGCCGAGATTGCCCACAACGTGTCCA
CGCGCAAGCGCAAGGAGATCGTCGAGCGGGCCGCGGAGCTGCACGTGCGC
GTCACCAACGCCGGCGCCAAGCTGCAAACCGAGGAGAAGAGCTGACAGGA
AGTACTGCGCCGAGATTGCCCACAACGTGTCCACGCGCAAGCGCAAGGAG
ATCGTCGAGCGGGCCGCGGAGCTGCACGTGCGCGTCACCAACGCCGGCGC
CAAGCTGCAAACCGAGGAGAAGAGCTGA back to top
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