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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 888 |
| Cds size | 885 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815575.4976947-CDS-S-ischiensis_contig11:10946..11009 | 1622815575.4976947-CDS-S-ischiensis_contig11:10946..11009 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 10947..11009 + |
| 1695739779.932935-CDS-S-ischiensis_contig11:10946..11009 | 1695739779.932935-CDS-S-ischiensis_contig11:10946..11009 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 10947..11009 + |
| 1622815575.5144186-CDS-S-ischiensis_contig11:11429..12251 | 1622815575.5144186-CDS-S-ischiensis_contig11:11429..12251 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 11430..12251 + |
| 1695739779.9505265-CDS-S-ischiensis_contig11:11429..12251 | 1695739779.9505265-CDS-S-ischiensis_contig11:11429..12251 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 11430..12251 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.1956.1 >prot_S-ischiensis_contig11.1956.1 ID=prot_S-ischiensis_contig11.1956.1|Name=mRNA_S-ischiensis_contig11.1956.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=295bp
VTVDLLRVFNYVRVEGLRIGEAEDRIRAAVAAETPRHGSLAMQVVMVRHQ
VPDHEALHGLGGGSGGGYMSAGPSGCAAAAAAAAAAKMLSVQTGAATPAP
PKAASIWGLPAVAAAGPAGREGNNGGGGGGGGGGSSSRSGRGGTSPGAVS
SSWAEGLRRMRKQPGARWLRLRQQPVMQDVAAAAAVAAWATAAPDAREAA
SAAASAAVAGAGPGRAGPKASSLADGGGGGGGCGSGANGGAVATCKVCWA
AGATCERKAAGVRCRRCMQKKICCSLTRSRPGLGGGLEGRAWLGP back to topmRNA from alignment at S-ischiensis_contig11:10947..12253+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig11.1956.1 ID=mRNA_S-ischiensis_contig11.1956.1|Name=mRNA_S-ischiensis_contig11.1956.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1307bp|location=Sequence derived from alignment at S-ischiensis_contig11:10947..12253+ (Schizocladia ischiensis KU_0333)
GTGACGGTGGACCTGCTGCGGGTGTTCAACTACGTTAGGGTTGAGGGCCT
CCGAATCGGGGAGGTGGGTTGCTTGCACGGATGCACGTGGTACTTGGAAG
TACTCAACGAGTGTGCTTCAAGAGGAGCAGTACTGGTGCTTTGCAGTACG
ATTACTGCTGGAGTACTTGGTGGCATTCTCTCTGCTTCTCGCACGTGTTG
CAAACCACTCTGGCAGGCAAGCACTTCCAAGCACTACTGTACGTACTTCA
TACCTCTAGCAGTAGCAGCATCCGTAGCATCTGCTTCTCGTACAATATAT
ATATATACATATGTGTGGTGCTTGCCGTAGTCCCGAGGCCATTGACCCCG
CGCCTCGTTCGAGAAGGAGCAGGTACGTGTTGCAAACCACTCTGGCAGGC
AAGCACTTCCAAGCACTACATACTCCAGCAAGCAGCATCCGTAACATCTC
CACCACCACCTCGAAACTGCTGCTTTCCCGCAGGCCGAGGACCGCATCCG
CGCCGCTGTCGCTGCCGAAACACCCCGGCATGGCTCCCTGGCCATGCAGG
TAGTCATGGTGCGCCACCAAGTCCCAGACCACGAGGCCTTGCACGGTCTT
GGCGGCGGCAGTGGCGGCGGCTACATGAGTGCCGGCCCCTCTGGATGCGC
GGCGGCGGCCGCAGCGGCGGCGGCGGCAAAGATGCTGAGCGTGCAGACGG
GGGCGGCCACCCCAGCTCCTCCGAAAGCAGCCTCAATTTGGGGGCTTCCG
GCGGTTGCAGCGGCCGGCCCTGCGGGTCGTGAAGGGAACAACGGCGGCGG
CGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGAAGCGGTCGAGGTGGCA
CCAGCCCTGGCGCCGTTTCCTCGAGCTGGGCCGAGGGGCTTCGCAGGATG
CGGAAGCAGCCAGGGGCACGGTGGCTGCGACTCCGTCAGCAACCAGTTAT
GCAAGATGTGGCAGCAGCAGCGGCGGTGGCGGCGTGGGCTACGGCAGCGC
CTGATGCGCGGGAGGCTGCTTCTGCGGCGGCATCAGCGGCGGTGGCAGGT
GCAGGGCCGGGCCGGGCCGGGCCCAAGGCGTCTTCCTTGGCGGACGGCGG
CGGCGGCGGGGGGGGCTGCGGCAGTGGCGCCAATGGCGGGGCCGTGGCAA
CGTGCAAGGTGTGCTGGGCAGCTGGCGCGACGTGCGAACGCAAGGCAGCA
GGGGTGCGGTGCCGGCGCTGCATGCAGAAGAAAATATGCTGCAGCCTCAC
ACGGAGCAGGCCTGGGCTTGGAGGGGGCTTGGAGGGGAGAGCGTGGCTGG
GCCCAGC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig11:10947..12253+ >mRNA_S-ischiensis_contig11.1956.1 ID=mRNA_S-ischiensis_contig11.1956.1|Name=mRNA_S-ischiensis_contig11.1956.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1770bp|location=Sequence derived from alignment at S-ischiensis_contig11:10947..12253+ (Schizocladia ischiensis KU_0333)
GTGACGGTGGACCTGCTGCGGGTGTTCAACTACGTTAGGGTTGAGGGCCT
CCGAATCGGGGAGGTGACGGTGGACCTGCTGCGGGTGTTCAACTACGTTA
GGGTTGAGGGCCTCCGAATCGGGGAGGCCGAGGACCGCATCCGCGCCGCT
GTCGCTGCCGAAACACCCCGGCATGGCTCCCTGGCCATGCAGGTAGTCAT
GGTGCGCCACCAAGTCCCAGACCACGAGGCCTTGCACGGTCTTGGCGGCG
GCAGTGGCGGCGGCTACATGAGTGCCGGCCCCTCTGGATGCGCGGCGGCG
GCCGCAGCGGCGGCGGCGGCAAAGATGCTGAGCGTGCAGACGGGGGCGGC
CACCCCAGCTCCTCCGAAAGCAGCCTCAATTTGGGGGCTTCCGGCGGTTG
CAGCGGCCGGCCCTGCGGGTCGTGAAGGGAACAACGGCGGCGGCGGCGGC
GGCGGCGGCGGCGGCAGCAGCAGCAGAAGCGGTCGAGGTGGCACCAGCCC
TGGCGCCGTTTCCTCGAGCTGGGCCGAGGGGCTTCGCAGGATGCGGAAGC
AGCCAGGGGCACGGTGGCTGCGACTCCGTCAGCAACCAGTTATGCAAGAT
GTGGCAGCAGCAGCGGCGGTGGCGGCGTGGGCTACGGCAGCGCCTGATGC
GCGGGAGGCTGCTTCTGCGGCGGCATCAGCGGCGGTGGCAGGTGCAGGGC
CGGGCCGGGCCGGGCCCAAGGCGTCTTCCTTGGCGGACGGCGGCGGCGGC
GGGGGGGGCTGCGGCAGTGGCGCCAATGGCGGGGCCGTGGCAACGTGCAA
GGTGTGCTGGGCAGCTGGCGCGACGTGCGAACGCAAGGCAGCAGGGGTGC
GGTGCCGGCGCTGCATGCAGAAGAAAATATGCTGCAGCCTCACACGGAGC
AGGCCTGGGCTTGGAGGGGGCTTGGAGGGGAGAGCGTGGCTGGGCCCAGC
CGAGGACCGCATCCGCGCCGCTGTCGCTGCCGAAACACCCCGGCATGGCT
CCCTGGCCATGCAGGTAGTCATGGTGCGCCACCAAGTCCCAGACCACGAG
GCCTTGCACGGTCTTGGCGGCGGCAGTGGCGGCGGCTACATGAGTGCCGG
CCCCTCTGGATGCGCGGCGGCGGCCGCAGCGGCGGCGGCGGCAAAGATGC
TGAGCGTGCAGACGGGGGCGGCCACCCCAGCTCCTCCGAAAGCAGCCTCA
ATTTGGGGGCTTCCGGCGGTTGCAGCGGCCGGCCCTGCGGGTCGTGAAGG
GAACAACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGAA
GCGGTCGAGGTGGCACCAGCCCTGGCGCCGTTTCCTCGAGCTGGGCCGAG
GGGCTTCGCAGGATGCGGAAGCAGCCAGGGGCACGGTGGCTGCGACTCCG
TCAGCAACCAGTTATGCAAGATGTGGCAGCAGCAGCGGCGGTGGCGGCGT
GGGCTACGGCAGCGCCTGATGCGCGGGAGGCTGCTTCTGCGGCGGCATCA
GCGGCGGTGGCAGGTGCAGGGCCGGGCCGGGCCGGGCCCAAGGCGTCTTC
CTTGGCGGACGGCGGCGGCGGCGGGGGGGGCTGCGGCAGTGGCGCCAATG
GCGGGGCCGTGGCAACGTGCAAGGTGTGCTGGGCAGCTGGCGCGACGTGC
GAACGCAAGGCAGCAGGGGTGCGGTGCCGGCGCTGCATGCAGAAGAAAAT
ATGCTGCAGCCTCACACGGAGCAGGCCTGGGCTTGGAGGGGGCTTGGAGG
GGAGAGCGTGGCTGGGCCCA back to top
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