mRNA_S-ischiensis_contig109.1950.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig109.1950.1
Unique NamemRNA_S-ischiensis_contig109.1950.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig109.1950.1 vs. uniprot
Match: A0A151R6U8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R6U8_CAJCA)

HSP 1 Score: 393 bits (1010), Expect = 6.860e-115
Identity = 305/1046 (29.16%), Postives = 489/1046 (46.75%), Query Frame = 1
Query:   10 LCDSGANIHMTPHLRDLTAGHSVSRTCTF-GNKGQLQARAMGETRLEAKTTTGDAALVVLAGVLWVPGLPCRLLSTGALRRNGGEF-VDSGIQDSHLWLATGMPKINLAIKGAFLTLEVAGLTKGATV---NATFVNKHQQLTLKEWHEVLGHMNPAVIKHLEKRGLVH-VTEATVPSELQCGICKECKSEALSYARGGRSPKTIGDVVHTDLEGPFHPDINGMKYFQVFVEEATRDKRVIGLKTKDAATDTTATYVDEMVRE-GVAVKCLSGDGAGELTRSVKFQRMLADQGIKWCKSPRWTLQSNGIPERAIKQLMQAVRSQLVRSGLGEEFWFFAVADAAFKTSALPHEFLGGEIPRERLTGKPFNYDHPRVWGAECFVHQKKQQRVAASKFHPYAKRGIIVGHGRNSPSWHVWLPQESKLVTTVHVTFQPEARILELVGEPEDFTDIDH-------GRDHEDGTAAEDEATQDPDMDTEDQDQDNPAVGKRSSPHHGRRASRRLVHRQRVDYADLHAGCGGGSDTDTSNLVATGPQEPSPTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKVDGSVERYKARLIARGFTQQQGVDFLQTFSPVFGLGVMRSVLATAARHGWAIHSLDFTQAYLNASLQEDIWLELPDGH--------IVKANKALYGLKQSALEWYKELRSTILGEGWSSSANDECLYYRRSENGRVAVLVTYVHDTAFTGDYDEEIKRMRDTLLSTYEGRDLGVPDQLLGVRIATDETG--IILD*LLYTRSIVTEGMGSLDLRITTSPLDPGMDLSAQR---DDEEELGCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCMRHWHGLQHVLRYLAGTLDLCIHYAANTDSNDEQVLIR*SDSDWGNDIEMRWSVTGYILLYDGWPIAWRSKQQGTVTLSSAEAEWTAMAQGMRHCIFLRNILGEIDVPQQATPWFGDNWGALQAATTTGFSRRTKHVDMKLKCTREYIEQGLFTVQYVPTREQLVDILTK 3066
            + DSGA  HMTP+        S+S    F GN   L+   +G  +L+      D  +  + GV  V GL   LLS G L     +  V+ GI          + K NL +  A        L  G T+   +A+     Q+     WH  LGHM+   +K L +R L+  +   T+P    C  C   K   L +A+     K I D++H+D+       + G KYF  F+++ +R   V  +K K         +  ++  + G  +KCL  D  GE      F      +GIK   +   T Q NG+ ER  + L++  R+ L  +GL + FW  AV  A +  +  P   +G + P E   GKP NY    V+G   +V    Q+R    K  P +++ I +G+  N   + +W P   K+V +  V F       EL  E E+ + I         G+  ED T+   EA Q+   D ++ ++DN    +R++    R+  +   H   V  A   A C           + T   EPS  +EAL   D  +W  AM +E++ L     +     P  RK +   +VYKIK   +  VERY+ARL+ +G+ Q++G+DF + FSPV  L  +R VLA  A     +  LD   A+L+  LQE+I++  P+G         + +  K+LYGLKQ+   WYK   S I+  G++  ++D C YY R ++    +L+ YV D    G   ++I+ ++  L   ++ +DLG  +++LG++I  D     I L    Y   ++       D +  ++PL     LS+     ++ E +     PYA+ +G LM+    TRPD+A +V  +    A P   HW  ++ +LRY+ GT D+ + +  +     E  +    DSD+  D++ R S TGY+    G  ++W SK Q  V LS+ EAE+ A  Q  +  I+++ +L E+   Q+    + D+  AL  A    F  RTKH+ ++    RE +E+G   +Q + T++ + D++TK
Sbjct:  242 ILDSGATWHMTPNRDWFCTYESISGGSVFMGNDHALEIAGVGTIKLKMY----DGTIRTIQGVRHVKGLKKNLLSIGQLDDLKCKIHVEGGILK--------VVKGNLVVMKAEKITSNLYLLLGETLQEADASVAAISQEEATMMWHRRLGHMSERGLKILAERNLLSGLKMVTLPF---CEHCVTSKQHRLQFAKVTTRSKHILDLIHSDVWESPEISMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEYIDG-DFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERT---KLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAE----TELQKEQENDSTIKDTSIVEIGGKSKEDDTS---EAEQE--HDEQEPNEDNDGDVRRTT----RQTKKPSWHSDYV-MASHDAYC-----------LLTEEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKTAFLHGELQEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDRKNRRIWLSQKNYLLKVLRR-FNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGS-----EFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSALHIARNPAFHSRTKHIGIQYHFVREVVEEGKVDMQKIHTKDNIADVMTK 1237          
BLAST of mRNA_S-ischiensis_contig109.1950.1 vs. uniprot
Match: A0A2P6SP23_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SP23_ROSCH)

HSP 1 Score: 390 bits (1003), Expect = 2.260e-113
Identity = 301/1060 (28.40%), Postives = 491/1060 (46.32%), Query Frame = 1
Query:    1 ITLLCDSGANIHMTPHLRDLTA--GHSVSRTCTFGNKGQLQARAMGETRLEAKTTTGDAALVVLAGVLWVPGLPCRLLSTGALRRNGGEFVDSGIQDSHLWLATGMPKINLAIKGAFLTLEVAGLTKGATVNATFVNKHQQLTLKEWHEVLGHMNPAVIKHLEKRGLVHVTEATVPSELQCGICKECKSEALSYARGGRSPKTIGDVVHTDLEGPFHPDINGM-KYFQVFVEEATRDKRVIGLKTKDAATDTTATYVDEMVRE-GVAVKCLSGDGAGELTRSVKFQRMLADQGIKWCKSPRWTLQSNGIPERAIKQLMQAVRSQLVRSGLGEEFWFFAVADAAFKTSALPHEFLGGEIPRERLTGKPFNYDHPRVWGAECFVHQKKQQRVAASKFHPYAKRGIIVGHGRNSPSWHVWLPQESKLVTTVHVTFQPEARILELVGEPEDFTDIDHGRDHEDGTAAEDEATQDPDMDTEDQDQDNPAVGKRSSPHHG------------------RRASRRLVHRQRVDYADLHAGCGGGSDTDTSNLVATGPQEPSPTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKVDGSVERYKARLIARGFTQQQGVDFLQTFSPVFGLGVMRSVLATAARHGWAIHSLDFTQAYLNASLQEDIWLELPDG-------HIV-KANKALYGLKQSALEWYKELRSTILGEGWSSSANDECLYYRRSENGRVAVLVTYVHDTAFTGDYDEEIKRMRDTLLSTYEGRDLGVPDQLLGVRIATDETG--IILD*LLYTRSIVTEGMGSLDLRITTSPLDPGMDLS------AQRDDEEELGCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCMRHWHGLQHVLRYLAGTLDLCIHYAANTDSNDEQVLIR*SDSDWGNDIEMRWSVTGYILLYDGWPIAWRSKQQGTVTLSSAEAEWTAMAQGMRHCIFLRNILGEIDVPQQATPWFGDNWGALQAATTTGFSRRTKHVDMKLKCTREYIEQGLFTVQYVPTREQLVDILTK 3066
            +  + DSGA+ H TPHL   T   G    R    GN G  +   +G+   E  T  G+   ++L  V +VPGL   L+STG L R G  F   G  D    L  G   I        L      + KG       +N     +   WH+ LGHM+   ++ L K+ L+   + T  S   C  C   K   +S+ R     + + D+VH+D+ GP   +  G  KYF  ++++A+R   V  LKTKD    T   +   + RE G  +KC+  D  GE T S +F+   +  GIK  K+   T Q NG+ ER  + +++ VRS L  + L ++FW  A+  A +  +  P   LG E P    TG+  +Y H RV+G + F H  K+QR   SK    A   I +G+G     + +W P+  KL  +  V F     I +      D  +++H       ++   E   D   D  ++D  + A  +                         RR++R      +   +        G D  +         EP    EA    D DKW  AM  E++ L     +     P  RK +K  +V+K+K   +  + ++KARL+ +GF Q++G+DF + FSPV  +  +R +L  AA     +  LD   A+L+  L+E+I++E P+G       H+V K  K+LYGLKQ+  +WYK+  S ++G G+  +  D C+Y +R   G   +L+ YV D    G     I +++  L  +++ +DLG   Q+LG+ I  D     + L    Y   ++ E     + +  +SPL     LS       Q + ++  G    PY++ +G LM+    TRPD+A +V  +    ++P   HW  ++ +L+YL GT  LC+ +  +     E +L   +D+D   D++ R S + Y+  + G  ++W+SK Q  V LS+ E+E+ A  +  +  I+L+  + E+ V Q       D+  A+  +  + +  RTKH+D +    R+ + +  F ++ + T + + D+LTK
Sbjct:  294 VAWVVDSGASFHATPHLEYFTTYQGGDFGRV-KMGNDGYSKISGIGDICFE--TDLGNK--LMLKDVRYVPGLRLNLMSTGVLDRQG--FHHHG-GDQKWRLTKGSLVIARGKMCCTLYKTYGKICKGE------LNVADDSSPSLWHKRLGHMSEKGLQVLAKKSLIPFAKGT--SLDSCDYCLFGKQHKVSFTRTFTRKENVLDLVHSDVCGPMEVESVGHNKYFVTYIDDASRKVWVYLLKTKDQVFQTFKEFHAMVERETGRTLKCIRSDNGGEYT-SNEFRDYCSKHGIKHVKTIPGTPQHNGVAERMNRTILEKVRSMLKTANLTKKFWGEAMTTACYLINRTPCVPLGLETPEGVWTGRSASYSHLRVFGCKAFAHVPKEQR---SKLDDKAMPCIFLGYGNEEMGYRLWNPKTKKLFRSRDVVFHEGQTIADF-----DKNEVEHADQLTYDSSPLQEEPSDKAQDMVNEDVPDMAEAEAXXXXXXXXXXXXQGEQLENAQVPVRRSNREPKPNTKYHSSQYILVTSDGDDPYSRXXXXXXXXEPECFEEAKTHADCDKWMLAMKSEMESLLKNDTYELVELPKGRKALKNKWVFKLKRDENEQLTKFKARLVVKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVEGKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIHKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVL-ERFNMKEAKSVSSPLGNHFKLSRLSCPTTQVEKDKMAGI---PYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLCFGGS-----EPILEGFTDADLAGDLDNRKSTSAYLFTFSGGAVSWQSKLQKCVALSTTESEYLAANEAGKEMIWLQRFVQELGVKQGNYVVHCDSQSAIHLSKNSMYHPRTKHIDHRYHWIRDAVSKKFFQLRKIHTNKNISDMLTK 1319          
BLAST of mRNA_S-ischiensis_contig109.1950.1 vs. uniprot
Match: A0A6A3C690_HIBSY (Protein STRUBBELIG-RECEPTOR FAMILY 8 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C690_HIBSY)

HSP 1 Score: 390 bits (1001), Expect = 1.310e-111
Identity = 295/1060 (27.83%), Postives = 496/1060 (46.79%), Query Frame = 1
Query:   10 LCDSGANIHMTPH------LRDLTAGHSVSRTCTFGNKGQLQARAMGETRLEAKTTTGDAALVVLAGVLWVPGLPCRLLSTGALRRNGGEFVDSGIQDSHLWLATGMPKINLAIKGAFLTLEVAGLT-KGATVNATFVNKHQQLTLKEWHEVLGHMNPAVIKHLEKRGLVHVTEATVPSELQCGICKEC---KSEALSYARGGRSPKTIGDVVHTDLEGPFHP-DINGMKYFQVFVEEATRDKRVIGLKTKDAATDTTATYVDEM-VREGVAVKCLSGDGAGELTRSVKFQRMLADQGIKWCKSPRWTLQSNGIPERAIKQLMQAVRSQLVRSGLGEEFWFFAVADAAFKTSALPHEFLGGEIPRERLTGKPF-NYDHPRVWGAECFVHQKKQQRVAASKFHPYAKRGIIVGHGRNSPSWHVWLPQESKLVTTVHVTFQPEARILELVGEPEDFTD-------------IDHGRDHEDGTAAEDEATQDPDMDTEDQDQDNPAVGKRSSPHHGRRASRRLVHRQRVDYADLHAGCGGGSDTDTSNLVATGPQEPSPTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKV-DGSVERYKARLIARGFTQQQGVDFLQTFSPVFGLGVMRSVLATAARHGWAIHSLDFTQAYLNASLQEDIWLELPDGH--------IVKANKALYGLKQSALEWYKELRSTILGEGWSSSANDECLYYRRSENGRVAVLVTYVHDTAFTGDYDEEIKRMRDTLLSTYEGRDLGVPDQLLGVRIATDET--GIILD*LLYTRSIVTE-GMGSLDLRITTSPLDPGMDLSAQ---RDDEEELGCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCMRHWHGLQHVLRYLAGTLDLCIHYAANTDSNDEQVLIR*SDSDWGNDIEMRWSVTGYILLYDGWPIAWRSKQQGTVTLSSAEAEWTAMAQGMRHCIFLRNILGEIDVPQQATPWFGDNWGALQAATTTGFSRRTKHVDMKLKCTREYIEQGLFTVQYVPTREQLVDILTK 3066
            L DS  + HMTP+       ++L  G   +      N   L    +G  RL  +    D ++  L GV +VP L   L+S G L   G E      +D  + + +G   I   I+         G T  G    A   ++ +    + WH  LGH+    +K L  +GL+    A      +   C+ C   K   + +       K I D VH+D  GP     + G  Y+  FV++ +R   V  +KTKD        +   M  + G  +K L  D  GE    + F ++  ++GI    + R T Q NG+ ER  + L++ VR  L  +GLG+EFW  A+  A    + LP   +GG+ P E+  G P  +YD   V+G+  + H K+      SK  P AK+ I +G       + +W P+  K++ +  VTF     + ++  E  + TD             +   ++++  +   +E + + ++ T++  Q + ++  R           ++  RQ   YAD+            ++ +A     P+   +A+   +  KW+ AM++E+Q L     +     P  +K +   +VY  K    D +  RYKARL+A+G+ Q +GVD+ + FSPV     +R +LA  A+    +  +D   A+L+  L E+I++  PDG         + K  K+LYGLKQS  +WYK     ++G+ ++ S  D C+Y R  E+G    L+ YV D         EI +++  L   +E +DLG   ++LG+ I+ D+    + L    Y R ++   G+  +   ++T PL P   L A    +DD E       PYA+ +G LM+    TRPD++ ++  +      P   HW  ++ +LRY+  T+D+ + +    D  D Q ++   DSD+  D++ R S TGY+  +   P++W+S  Q TVTLS+ EAE+ A+ + ++  I+L+ +LGE+ + Q+      D+  A+  A    +  RTKH+D++    RE +E+G   +Q + T E   D+LTK
Sbjct:  273 LLDSACSHHMTPNREWFFDFKELKGGIVYT-----ANNSPLDTLGIGSIRLRNQ----DGSIRTLTGVHYVPDLMRNLISVGTLESKGLEVR---AKDGIMRIISGALVIMKGIRKRNNVYYFLGSTIVGTAAVAASTDEQESEATRLWHMRLGHVGEKSLKLLIDQGLLKGARAC-----KLAFCEHCIKGKKTRVKFGTAIHDTKGILDYVHSDEWGPSKTTSLGGTHYYVTFVDDFSRRVWVYPMKTKDEVLGFFLKWKKMMETQTGRKIKRLRTDNGGEYKNDL-FLKVCEEEGIVRHFTVRGTPQQNGVAERMNRTLVEKVRCMLSNAGLGKEFWAEALVYACHLVNHLPSTAIGGKTPLEKWFGVPATDYDSLHVFGSTAYYHVKE------SKMDPRAKKAIFMGITSGVKGYRLWCPETKKIIFSRDVTFDESTMLRKVTSEKLEQTDGTPKKVEFEGSKFVPTSKENDVDSPMVEEESDEEEVQTQEPPQQHESIALRKG---------KMTIRQPARYADM---------VSFASPIAID-DVPATFNKAVQSSEHKKWRIAMNEEMQSLQKNKTWKLASLPKGKKAIGCKWVYAKKDGFPDKNNIRYKARLVAKGYAQTKGVDYNEVFSPVVKHSSIRILLALVAQLDLELVQMDVKTAFLHGDLDEEIYMTHPDGFKVAEKEEMVCKLEKSLYGLKQSPRQWYKRFDKFMIGQKYTRSKYDHCVYLRELEDGSYIYLLLYVDDMLIASRSQTEIAKLKTQLNREFEMKDLGEAKKILGMEISRDKKLGRLCLSQKEYLRKVLKRFGINEMSKPVST-PLAPHFKLGASMSPKDDVEREYMSKVPYASAVGSLMYAMVCTRPDISQAIGVVSRYMHDPGKEHWQAVKWILRYILNTVDVGLVF--QQDKQDGQCVVGYCDSDYAGDLDKRRSTTGYVFTFAKAPVSWKSTLQSTVTLSTTEAEYMAVTEAVKEAIWLQGLLGELGMEQKHIKVHCDSQSAIHLAKNQVYHARTKHIDVRYHFVREILEEGGVIIQKIWTTENPADMLTK 1286          
BLAST of mRNA_S-ischiensis_contig109.1950.1 vs. uniprot
Match: H6U1F0_CITSI (Polyprotein n=2 Tax=Citrus sinensis TaxID=2711 RepID=H6U1F0_CITSI)

HSP 1 Score: 385 bits (989), Expect = 1.320e-111
Identity = 300/1051 (28.54%), Postives = 483/1051 (45.96%), Query Frame = 1
Query:   10 LCDSGANIHMTP-----HLRDLTAGHSVSRTCTFGNKGQLQARAMGETRLEAKTTTGDAALVVLAGVLWVPGLPCRLLSTGALRRNGGE-FVDSGIQDSHLWLATGMPKINLAIKGAFLTLEVAGLT------KGATV---NATFVNKHQQLTLKEWHEVLGHMNPAVIKHLEKRGLVH-VTEATVPSELQCGICKECKSEALSYARGGRSPKTIGDVVHTDLEGPFHPDINGMKYFQVFVEEATRDKRVIGLKTKDAATDTTATYVDEMVRE-GVAVKCLSGDGAGELTRSVKFQRMLADQGIKWCKSPRWTLQSNGIPERAIKQLMQAVRSQLVRSGLGEEFWFFAVADAAFKTSALPHEFLGGEIPRERLTGKPFNYDHPRVWGAECFVHQKKQQRVAASKFHPYAKRGIIVGHGRNSPSWHVWLPQESKLVTTVHVTFQPEARILELVGEPEDFTDIDHGRDHEDGTAAEDEATQDPDMDTEDQDQDNPAVGKRSSPHHGRRASRRLVHRQRVDYADLHAGCGGGSDTDTSNLVATGPQEPSPTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKVDGSVERYKARLIARGFTQQQGVDFLQTFSPVFGLGVMRSVLATAARHGWAIHSLDFTQAYLNASLQEDIWLELPDGH--------IVKANKALYGLKQSALEWYKELRSTILGEGWSSSANDECLYYRRSENGRVAVLVTYVHDTAFTGDYDEEIKRMRDTLLSTYEGRDLGVPDQLLGVRIATDETG--IILD*LLYTRSIVTEGMGSLDLRITTSPLDPGMDLSAQR---DDEEELGCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCMRHWHGLQHVLRYLAGTLDLCIHYAANTDSNDEQVLIR*SDSDWGNDIEMRWSVTGYILLYDGWPIAWRSKQQGTVTLSSAEAEWTAMAQGMRHCIFLRNILGEIDVPQQATPWFGDNWGALQAATTTGFSRRTKHVDMKLKCTREYIEQGLFTVQYVPTREQLVDILTKRL 3072
            L DSGA  HMT      H  +  +G SV      GN   L+   +G  +++      D  +  +  V  V GL   LLS G +  +G +  V++GI            KI   +KGA + ++   +       KG T+   +A   +  ++ T+  WH  LGHM+   +K L +R L   +   ++P    C  C   K   L ++R     K I D++H+D+       + G KY   F+++ +R   V  +K K         Y   +  E G  +KCL  D  GE T S +F      +GI+   +  +T Q NG+ ER  + L + +R+ L  +GL   FW  A   A +  +  P   +G +   E  TGKP +Y +   +G   +V    Q+R    K  P +++ I +G+      + +W P   K+V +  V F  +                   +D +DGT  E   T    ++   ++ D+                   V R   +           ++ + +  + T   EPS   EAL   D   W  AM +E++ L     +   P P  RK +   +VYKIK   +  VERY+ARL+ +G+ Q++G+DF + FSPV  L  +R VLA  A     +  LD   A+L+  L+E+I++  P+G         + + NK+LYGLKQ+   WYK   S I+  G++  ++D C YY+R E+    +L+ YV D    G   + I+ ++  L   +E +DLG  +++LG++I  D     I L    Y + I+       D +  ++PL     LS+     ++ E       PYA+ +G LMF    TRPD+A +V  +    A+P   HW  ++ +LRY+ GT ++ + Y  +     E  +    DSD+  D++ R S TGY+    G  ++W SK Q  V LS+ EAE+ A  Q  +  I+++ +L E+   QQ  P F D+  AL  A    F  RTKH+ ++    RE +E G   +Q + T+E L D+LTK +
Sbjct:  293 LIDSGATWHMTSRREWFHTYEPISGGSVY----MGNDHALEIAGIGTIKIKMF----DGTIRTIEEVRHVNGLKKNLLSLGQMDSHGCKTHVENGIM-----------KI---VKGALVLMKAEKICANLFMLKGETLQEADACVASNGEESTMM-WHLKLGHMSEQGLKILSERKLPPGLKSVSLPF---CEHCVTSKQHRLKFSRSIARSKCILDLIHSDVWESPDISMGGAKYMVTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYTDS-EFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLHAFGCPVYVMYNAQERT---KLDPKSRKCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQL---------------QRKDGDDGTVKEKSETVPVYVENNPENSDSXXXXXXXXXXXXXXXXXXXVRRSTRERRPPTWHSEYVTEINVAYCLLTEDGEPSTFHEALNSLDVALWMTAMQEEIEALHKNKTWELVPLPHGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNRKIWLSQKNYLKKILRR-FNMQDCKSISTPLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGGEHWIAVKRILRYIRGTSNVALCYGGS-----EFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHKQQKIPVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTKENLADVLTKSI 1292          
BLAST of mRNA_S-ischiensis_contig109.1950.1 vs. uniprot
Match: Q9ZRJ0_TOBAC (Retrotransposon Tto1 DNA n=2 Tax=Nicotiana tabacum TaxID=4097 RepID=Q9ZRJ0_TOBAC)

HSP 1 Score: 385 bits (988), Expect = 2.700e-111
Identity = 297/1084 (27.40%), Postives = 508/1084 (46.86%), Query Frame = 1
Query:    1 ITLLCDSGANIHMTPHLRDLTAGHSVSRTCTFGNKGQLQARAMGETRLEAKTTTGDAALVVLAG-------VLWVPGLPCRLLSTGALRRNG-------GEFVDSGIQDSHLWLATGMPKINLAIKGAFLTLEVAGLTKGATVNATFVNKHQQLTLKEWHEVLGHMNPAVIKHLEKRGLVHVTEATVPSELQCGICKEC---KSEALSYARGGRSPK-TIGDVVHTDLEGPFHPDINGMKYFQVFVEEATRDKRVIGLKTKDAATDTTATYVDEMVRE-GVAVKCLSGDGAGELTRSVKFQRMLADQGIKWCKSPRWTLQSNGIPERAIKQLMQAVRSQLVRSGLGEEFWFFAVADAAFKTSALPHEFLGGEIPRERLTGKPFNYDHPRVWGAECFVHQKKQQRVAASKFHPYAKRGIIVGHGRNSPSWHVWLPQESKLVTTVHVTFQPEARILELVGEPEDFTDIDHGRD-------HEDGTAAEDEATQDPDMDTEDQ------DQDN-------------PAVGKRSSPHHGRRASRRLVHRQRVDYADLHAGCGGGSDTDTSNLVATGPQEPSPTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKVDGSVERYKARLIARGFTQQQGVDFLQTFSPVFGLGVMRSVLATAARHGWAIHSLDFTQAYLNASLQEDIWLELPDG--------HIVKANKALYGLKQSALEWYKELRSTILGEGWSSSANDECLYYRRSENGRVAVLVTYVHDTAFTGDYDEEIKRMRDTLLSTYEGRDLGVPDQLLGVRIATDETG--IILD*LLYTRSIVTEGMGSLDLRITTSPLDPGMDLSAQRD---DEEELGCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCMRHWHGLQHVLRYLAGTLDLCIHYAANTDSNDEQVLIR*SDSDWGNDIEMRWSVTGYILLYDGWPIAWRSKQQGTVTLSSAEAEWTAMAQGMRHCIFLRNILGEIDVPQQATPWFGDNWGALQAATTTGFSRRTKHVDMKLKCTREYIEQGLFTVQYVPTREQLVDILTKRLRK 3078
            +T + DSGA IH TP  R+L + +      T G+ G+++   MG          GD  L  + G       V  VP +   L+S   L   G       G++    +    L +A G  +  L +  A ++ +V  + +  +             +K WH  LGHM+   +  L K+  +        +++Q   C +C   K   +S+ R   S +  + D+VH+D+ GPF   + G +YF  F+++ +R   V  LKTKD        ++  + RE G  +KC+  D  GE     +F     + GI+   +P  T Q NG+ ER  + L++  R  L  S L + FW  A+  AA+  +  P   L  + P +   G+  +YD  RV+G + +VH  K +R   SK     +  + +G+G++   +  + P E KLV +  V F  E + +E + + E  TD     +        + G   +D   + P +  ED+      ++DN             P +   + P+H R  S R+V +Q   Y+                ++ T   EP    EA+     +KW EAM  E++ L     F     P  ++ +K  +V+K+KH    S+ R+KARL+ +GF Q++G+DF + FSPV  +  +R+VL  AA     +  +D   A+L+  L+E+I++E PDG        ++ +  K+LYGLKQ+  +WYK+  S +   G+  + +D C++ ++  +    +L+ YV D    G     I  +++ L   +  +DLG   Q+LG+RI  D     + L    Y   ++ +       +  + PL     LS ++    D+E    +  PYA+ +G LM+    TRPD+A +V  +    ++P   HW  ++ +LRYL GT  LC+ +       D  VL+  +D+D   D++ R S +GY++ + G  ++W+SK Q  V LS+ EAE+ A  +  +  I+++  L E+   Q     F D+  A+  A    F  R+KH+D++    R+ +E+ +  ++ + T E   D+LTK L K
Sbjct:  290 MTWVIDSGATIHATPR-RELFSSY------TLGDFGRVK---MGNANFSTVVGKGDVCLETMNGMKLLLRDVRHVPDMRLNLISVDKLDEEGYCNTFHNGQWK---LTKGSLMVARGTKQSKLYVTQASISQQVINVAENDS------------NIKLWHRRLGHMSEKSMARLVKKNALPGL-----NQIQLKKCADCLAGKQNRVSFKRFPPSRRQNVLDLVHSDVCGPFKKSLGGARYFVTFIDDHSRKTWVYTLKTKDQVFQVFKQFLTLVERETGKKLKCIRTDNGGEY--QGQFDAYCKEHGIRHQFTPPKTPQLNGLAERMNRTLIERTRCLLSHSKLPKAFWGEALVTAAYVLNHSPCVPLQYKAPEKIWLGRDISYDQLRVFGCKAYVHVPKDER---SKLDVKTRECVFIGYGQDMLGYKFYDPVEKKLVRSRDVVFV-EDQTIEDIDKVEKSTDDSAEFELPPTVVPRQVGDDVQDNQPEAPGLPNEDELADTEGNEDNGDXXXXXXXQPQPPILN--NPPYHTR--SGRVV-QQSTRYSPHEY------------VLLTDGGEPDSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFELVKLPKGKRALKNKWVFKMKHDEHNSLPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGLAASLNLEVEQMDVKTAFLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMGQHGYKKTTSDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSRINSLKEQLSKFFAMKDLGPAKQILGMRIMRDREAKKLWLSQEKYIEKVL-QRFNMEKTKAVSCPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFG-----EDNPVLVGYTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKLQKCVALSTTEAEFIAATEACKELIWMKKFLTELGFSQDGYQLFCDSQSAIHLAKNASFHSRSKHIDVRYNWIRDVLEKKMLRLEKIHTDENGSDMLTKTLPK 1314          
BLAST of mRNA_S-ischiensis_contig109.1950.1 vs. uniprot
Match: A0A438E432_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E432_VITVI)

HSP 1 Score: 382 bits (980), Expect = 3.750e-111
Identity = 299/1053 (28.40%), Postives = 497/1053 (47.20%), Query Frame = 1
Query:   16 DSGANIHMTPHLRDLTA-GHSVSRTCTFGNKGQLQARAMGETRLEAKTTTGDAALVVLAGVLWVPGLPCRLLSTGALRRNGGEFVDSGIQDSHLWLATGMPKINLAIKGAFLTLEVAGLTKGATVNATFVNKHQQLTLKEWHEVLGHMNPAVIKHLEKRGLVHVTEATVPSELQCGICKECKSEALSYARGGRSPKT-IGDVVHTDLEGPFHP-DINGMKYFQVFVEEATRDKRVIGLKTKDAATDTTATYVDEMVRE-GVAVKCLSGDGAGELTRSVKFQRMLADQGIKWCKSPRWTLQSNGIPERAIKQLMQAVRSQLVRSGLGEEFWFFAVADAAFKTSALPHEFLGGEIPRERLTGKPFNYDHPRVWGAECFVHQKKQQRVAASKFHPYAKRGIIVGHGRNSPSWHVWLPQESKLVTTVHVTFQPEARILEL------VGEPEDFTDID-------HGRDHEDGTAAEDEATQD--PDMDTEDQDQDNPAVGKRSSPHHGRRASRRLVHRQRVDYADLHAGCGGGSDTDTSNLVATGPQEPSPTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKVDGSVERYKARLIARGFTQQQGVDFLQTFSPVFGLGVMRSVLATAARHGWAIHSLDFTQAYLNASLQEDIWLELPDGHIVKAN--------KALYGLKQSALEWYKELRSTILGEGWSSSANDECLYYRRSENGRVAVLVTYVHDTAFTGDYDEEIKRMRDTLLSTYEGRDLGVPDQLLGVRIATDET-GII-LD*LLYTRSIVTEGMGSLDLRITTSPLDPGMDLSAQR---DDEEELGCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCMRHWHGLQHVLRYLAGTLDLCIHYAANTDSNDEQVLIR*SDSDWGNDIEMRWSVTGYILLYDGWPIAWRSKQQGTVTLSSAEAEWTAMAQGMRHCIFLRNILGEIDVPQQATPWFGDNWGALQAATTTGFSRRTKHVDMKLKCTREYIEQGLFTVQYVPTREQLVDILTKRLRK 3078
            DSGA+ H+T      T+           GN+   +   MG+  LE  T TG   L  L  V  VP +   L+S G L   G    ++   D    L+ G   +    K   L    A + K   VN    +    L    WH  LGHM+   ++ L K+ L+   + T P +  C  C   K   +S+ R   S K+ + D++H+D+ GP     + G  YF  F+++ +R      LKTKD   D    +  ++ RE G  +KC+  D  GE      F +   + GI+  K+ + T Q NG+ ER  + +++ VR  L  S L   FW  A+  A    +  P   L G++P +  TGK  +YDH RV+G   FVH  K +R   SK  P AK+ I +G+G     + ++ P + K+V +  V F  +  I ++           D  D+D       H  D E  T  +D A  D  P+++ E   Q+             ++ S++    + V  +D                      EP   +E L   +  +W +AM +E++ L     +     P  +K +K  +V++ K+  + S  R+KARL+ +GF Q++GVDF + FSPV  +  +R+VL  AA     +  LD   A+L+  L+E+I++E P+G I K N        K+LYGLKQ+  +WY++  S +   G+S +  D C++ ++  +G   +L+ YV D    G    +I +++  L  ++  +DLG   Q+LG+RI  + + G+I L    Y + ++ E       +    PL     LS+ +    DEE+   +  PYA+ +G LM+    TRPD+A +V  +    ++P   HW  ++ +LRYL GT  + + +        E +L   +DSD   D++ R S +GY++ + G  + W+S+ Q  V LS+ EAE+ A+ +  +  ++L+  L E+ + Q+      D+  A+  +  + F  R+KH+D++    R+ +   L  ++ V T +   D+LTK L K
Sbjct:  163 DSGASFHVTSRADFFTSYSQGDFGNVRMGNEDVSKIVGMGDICLE--TNTGCKLL--LRDVRHVPDIRLNLISAGKLDDEG---YNNNFSDGKWKLSKGSLVVAKGKKTCSLYTVQAKICK-CVVNTLENDSSTDL----WHRRLGHMSEKGLQVLSKKELLAGIKGT-PLKT-CVHCFHGKQNRISFRRNIASRKSHVLDLIHSDVCGPLKVRTLGGALYFVTFIDDHSRKVWAYTLKTKDQVLDVFKHFQAKVERETGRQLKCVRSDNGGEYIGP--FDQYCTNHGIRHEKTVKKTPQQNGVAERMNRTILERVRCLLSHSKLPRSFWGEAMRTAVDLINLSPSVPLNGDVPEKVWTGKEVSYDHLRVFGCRAFVHIPKDER---SKLDPKAKQCIFIGYGHEDFGYRLYDPVDKKVVRSRDVVFLEDQTIEDIDKLESAESSTNDLVDLDPLNPPVVHDIDEEVQTPHDDAAEDDVEPEIEGEQSPQEPLXXXXXXRSTREKQPSKKYSSNEYVMISDQG--------------------EPETYQEVLKHENKTEWLKAMKEEMKSLNENHTYDLVKPPKGKKILKNKWVFRRKNDGNSSQPRFKARLVVKGFDQRKGVDFDEIFSPVVKMSSIRTVLGIAASMNLEVEQLDVKTAFLHGDLEEEIYMEQPEGFIDKGNDQLVCKLKKSLYGLKQAPRQWYRKFDSFMTEHGYSRTTLDHCVFVKKYPDGNFIILLLYVDDMLIMGQDMSKISKLKSELSKSFAMKDLGPAKQILGIRIVRNRSHGLIWLSQENYVKKVL-ERFNMDKAKPVNCPLAGHFKLSSSQCPTSDEEKNEMQKIPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWAAVKWILRYLQGTSKMSLCFGKG-----EPILDGFTDSDMAGDVDSRKSTSGYLITFAGGAVTWQSRLQKCVALSTTEAEFIAITEACKELLWLKKFLQELGLKQERYVLHCDSQSAIHLSKNSSFHSRSKHIDVRYHWIRDVLNDKLLQLEKVHTDDNTSDMLTKALTK 1170          
BLAST of mRNA_S-ischiensis_contig109.1950.1 vs. uniprot
Match: A0A0A9W6P7_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9W6P7_LYGHE)

HSP 1 Score: 380 bits (977), Expect = 1.060e-110
Identity = 298/1079 (27.62%), Postives = 508/1079 (47.08%), Query Frame = 1
Query:   10 LCDSGANIHMTPHLRDLTAGHSV--SRTCTFGNKGQLQARAMGETRLEAKTTTGDAALVVLAGVLWVPGLPCRLLSTGALRRNGGEF-VDSG----IQDSHLWLATGMPKINLAIKGAFLTLEVAGLTKGATVNATFVNKHQQLTLKEWHEVLGHMNPAVIKHLEKRGLVHVTEATVPSELQ-CGICKECKSEALSYARGGRSP-KTIGDVVHTDLEGPFHPDINGM-KYFQVFVEEATRDKRVIGLKTKDAATDTTATYVDEMVRE-GVAVKCLSGDGAGELTRSVKFQRMLADQGIKWCKSPRWTLQSNGIPERAIKQLMQAVRSQLVRSGLGEEFWFFAVADAAFKTSALPHEFLGGEIPRERLTGKPFNYDHPRVWGAECFVHQKKQQRVAASKFHPYAKRGIIVGHGRNSPSWHVWLPQESKLVTTVHVTFQPEARILE--LVGEPEDFTDIDHG---RDHEDGTAAEDEATQ---DPDMDTEDQDQDNPAVGKRSS--------------------------PHHGRRASRRLVHRQRVDYADLHAGCGGGSDTDTSNLVATGPQEPSPTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKVDGSVERYKARLIARGFTQQQGVDFLQTFSPVFGLGVMRSVLATAARHGWAIHSLDFTQAYLNASLQEDIWLELPDGHIVKAN--------KALYGLKQSALEWYKELRSTILGEGWSSSANDECLYYRRSENGRVAVLVTYVHDTAFTGDYDEEIKRMRDTLLSTYEGRDLGVPDQLLGVRIATDETG-IILD*LLYTRSIVTEGMGSLDLRITTSPLDPGMDLSAQRDD---EEELGCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCMRHWHGLQHVLRYLAGTLDLCIHYAANTDSNDEQVLIR*SDSDWGNDIEMRWSVTGYILLYDGWPIAWRSKQQGTVTLSSAEAEWTAMAQGMRHCIFLRNILGEIDVPQQATPWF-GDNWGALQAATTTGFSRRTKHVDMKLKCTREYIEQGLFTVQYVPTREQLVDILTKRL 3072
            L DSGA+ H TP+  D  +   +  + T T  +    +   +G   +  +T  G    +    V  VP    RLLS   + + G    + +G         L L+    + N+ I      L+   + K      T  +K       +WH   GH+N   ++ +  + LV+  +  +      C  C + K+    + +  +   K I D++H+D+ GP   + NG  +YF  F+++ +R   V  +++K    +    +   + ++ G  +KCL  D   E      F   L + GI    S  ++ Q NGI ER  + L+   R+ L+ S L + FW  AV  A +  +  P       IP +  TG+  +  H R +G + FVH  + +R    K    ++  I++G+   +  + +W P   +++ +  V F  +A + E  +    ED+ +I +    R+  D     +EA+    D  ++ E+ +Q+       S+                          P       R     +R +Y + + G            ++   +EP   ++A+ GPD   W+EA+++EL  L N   +     PP +  +   +V+KIK+  DGSVERYKARL+A+GFTQ+ GVD+ +T+SPV  L  +R  L  A  + W +H +D   AYLN  L+E+I++ LP+G I + +        K+LYGLKQS   WY+ L   +L  G   S ++ C+Y+ +S+ G + +++ YV D        E +  M+  L   +E +DLG  + +LG+ +   E G + ++   Y + I+T     +D +  +SP+DP  +LS  +     +E+      PY  ++GKLM+LA  TRPD+A  V +LG  +++P  +HW   + VLRYL GT +    Y      +++Q++   SDSDW    + R S TG+I+     P+ W+S +Q  + LS+ EAE+ A++      ++L  +L EI    +  P    DN  A+  A   G S  ++H+D++    RE  E+G   + Y+PT+E   DILTK L
Sbjct:  127 LFDSGASSHFTPYRTDFISYKLMEDNNTVTVASNVSCRIVGIGTVTIIYETEHGKYR-INFHDVFHVPDFRFRLLSMARIEKKGYRISLANGRCKVFDKKDLVLSANRNEDNMYI------LQNYQIMKQTAYALTTSDKI------DWHRRFGHVNFESLQLMSSKCLVNGFDKDMKENKNICDACIKGKNIRKPFPKFSKQETKDILDLIHSDVCGPLPVESNGKCRYFITFIDDFSRKAVVYFMRSKSEVLEHFKNFKSMVEKQTGKFIKCLRSDNGREYVNQA-FDEFLREHGIVRQLSSPYSPQQNGIAERLNRTLLDLTRTMLIDSHLPKSFWAEAVNTACYIRNKCPTTSKN-IIPEQIWTGRKPSVRHLRPFGCKAFVHVPEPRR---KKLDDRSQICIMLGYSSATKGYRLWDPINKRVIVSRDVIFDEKALVPESSIQNNVEDYFEIVYSETTRESMDINNHTNEASTGGVDSRIEVEEIEQNRRLNSTESNEQLQTNYEXXXXXXXXXXXXXXDVAQPSQFSMVLRNRETIKRPEYLNDYCG------------LSQEKKEPKTFKQAMDGPDHKLWKEAVEEELTSLKNMNVWELTDLPPGKSAIGCKWVFKIKYLADGSVERYKARLVAQGFTQEYGVDYNETYSPVVSLPTIRLFLKLAVENNWLVHQMDVKTAYLNGELKEEIYMRLPEGIITEESEKKVCRLLKSLYGLKQSGRAWYETLERKLLEGGMKKSKSESCIYFEKSD-GVIKIILVYVDDLILISSNLEAMSDMKIMLGRNFEMKDLGNLNYILGIEVKRQEDGSLFMNQWKYLQEIIT-AFHMIDCKSISSPMDPSQELSKSQCPITVQEKNEIANVPYRRLVGKLMYLAQATRPDIAFFVSKLGQFSSNPGKQHWAAAKRVLRYLKGTEN----YQLKITKDNDQIIAH-SDSDWAGSKDDRKSTTGFIIKIGRTPVIWKSNKQACIALSTMEAEFIAISSCCMELVWLEYVLSEIGYAIKKEPTILSDNQAAVHFAKGNGVSSHSRHIDIRYFYVREMWEKGKLCIAYLPTKENDADILTKPL 1168          
BLAST of mRNA_S-ischiensis_contig109.1950.1 vs. uniprot
Match: B8YLY7_LOTJA (Gag-Pol polyprotein n=1 Tax=Lotus japonicus TaxID=34305 RepID=B8YLY7_LOTJA)

HSP 1 Score: 382 bits (982), Expect = 1.180e-110
Identity = 294/1035 (28.41%), Postives = 470/1035 (45.41%), Query Frame = 1
Query:   10 LCDSGANIHMTPHLRDLTAGHSVSRTCTF-GNKGQLQARAMGETRLEAKTTTGDAALVVLAGVLWVPGLPCRLLSTGALRRNGGEFVDSGIQDSHLWLATGMPKINLAIKGAFLTLEVAGLTKGATVNATFVNKHQQLTLKEWHEVLGHMNPAVIKHLEKRGLVH-VTEATVPSELQCGICKECKSEALSYARGGRSPKTIGDVVHTDLEGPFHPDINGMKYFQVFVEEATRDKRVIGLKTKDAATDTTATYVDEMVRE-GVAVKCLSGDGAGELTRSVKFQRMLADQGIKWCKSPRWTLQSNGIPERAIKQLMQAVRSQLVRSGLGEEFWFFAVADAAFKTSALPHEFLGGEIPRERLTGKPFNYDHPRVWGAECFVHQKKQQRVAASKFHPYAKRGIIVGHGRNSPSWHVWLPQESKLVTTVHVTFQPEARILELVGEPEDFTDIDHGRDHEDGTAAEDEATQDPDMDTEDQDQDNPAVGKRSSPHHGRRASRRLVHRQRVDYADLHAGCGGGSDTDTSNLVATGPQEPSPTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKVDGSVERYKARLIARGFTQQQGVDFLQTFSPVFGLGVMRSVLATAARHGWAIHSLDFTQAYLNASLQEDIWLELPDGH--------IVKANKALYGLKQSALEWYKELRSTILGEGWSSSANDECLYYRRSENGRVAVLVTYVHDTAFTGDYDEEIKRMRDTLLSTYEGRDLGVPDQLLGVRIATD--ETGIILD*LLYTRSIVTEGMGSLDLRITTSPLDPGMDLSAQR---DDEEELGCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCMRHWHGLQHVLRYLAGTLDLCIHYAANTDSNDEQVLIR*SDSDWGNDIEMRWSVTGYILLYDGWPIAWRSKQQGTVTLSSAEAEWTAMAQGMRHCIFLRNILGEIDVPQQATPWFGDNWGALQAATTTGFSRRTKHVDMKLKCTREYIEQGLFTVQYVPTREQLVDILTK 3066
            + DSGA  HMTP          VS    F GN   L+   +G  +++      D  +  L  V  V  L   LLS G L   G ++    IQ   L +  G   +  A K A     + G T      +  V   ++ T+  WH  LGHM+   +K L +R L+  +   ++P    C  C   K   L +A+     K I D++H+D+       I G KYF  F+++ +R   V  +K K         +  ++  E G  +KCL  D  GE T    F      +GI    +   T Q NG+ ER  + L++  R+ L  +GL + FW  A   A +  +  P   +G + P E   GKP +Y   RV+G   +V    Q+R    K  P ++R   +G+  N   + +W P   K+  +  V F       EL  E ++           DGT  E    +  +   E+  +  P               RR    +++     H+     S      L   G  EPS   EA+ G DA  W  AM +E++ L     +     P  RK +   +V+KIK   +  VERY+ARL+ +G+ Q++G+DF + FSPV  L  +R VLA  A     +  LD   A+L+  L+E+I++  P+G         + +  K+LYGLKQ+   WYK   S I+  G++  ++D C YY+R ++G   +L+ YV D    G   + ++ ++  L   ++ +DLG  +++LG++I  D  +  I L    Y + ++       D    ++PL     LS+      + E +     PYA+ +G LM+    TRPD+A +V  +    A P   HW+ ++ +LRY+ GT    + +  +     E  +    DSD+  D++ R S TGY+    G  ++W SK Q  V LS+ EAE+ A  Q  +  I+ + +L E+   QQ    + D+  AL  A    F  RTKH+ ++    RE +E+G   +Q + T++ L D++TK
Sbjct:  292 IVDSGATWHMTPRRDWFCTYEPVSEGNVFMGNDHALEIVGIGTVKIKMY----DGTIRTLQEVRHVKELAKNLLSVGQLDDLGYKY---DIQGGILKVVKGSLVVMKAKKVAANLYMLLGDTWQMADASVAVGSQEETTMM-WHRRLGHMSERGLKVLAERNLIPGLKSVSLPF---CEHCVISKQHRLKFAKSTARSKHILDLIHSDVWESPEVSIGGAKYFVSFIDDYSRRLWVYPIKKKSGVYSVFKEFKAQVELETGKRIKCLRTDNGGEYTDG-DFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCPVYVMYNSQERT---KLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVEN----ELQKEQKN-----------DGTTKETATVEIEEKSGEENSEAEPXXXXXXXXXXXDAEPRRTT--RQIRKPSWHSEYVMASHDAYCLLSEDG--EPSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWELVELPKGRKAIGNKWVFKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRIVLAMCAAFELHLEQLDVKTAFLHGELEEEIYMLQPEGFEEKERENLVCRLTKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCTYYKRFDDGDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRR-FNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAALCFGGS-----EFTIRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWTQRLLEELGHKQQKITVYCDSPSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVNMQKIHTKDNLADVMTK 1286          
BLAST of mRNA_S-ischiensis_contig109.1950.1 vs. uniprot
Match: A0A131XNF9_9ACAR (Putative polyprotein (Fragment) n=1 Tax=Hyalomma excavatum TaxID=257692 RepID=A0A131XNF9_9ACAR)

HSP 1 Score: 381 bits (979), Expect = 4.680e-110
Identity = 293/1063 (27.56%), Postives = 464/1063 (43.65%), Query Frame = 1
Query:   16 DSGANIHMTPHLRDLTAGHSVSRTCTFGNKGQLQARAMGETRLEAKTTTGDAALVVLAGVLWVPGLPCRLLSTGALRRNGGEFVDSGIQDSHLWLATGMPKINLAIKGAFLTLEVAGLTKGATVNATFVNKHQQLTLKEWHEVLGHMNPAVIKHLEKRGLVHVTEATVPSELQCGICKECKSEALSYARGGRS-PKTIGDVVHTDLEGPFHPDINGMK-YFQVFVEEATRDKRVIGLKTKDAATDTTATYVDEMVRE--GVAVKCLSGDGAGELTRSVKFQRMLADQGIKWCKSPRWTLQSNGIPERAIKQLMQAVRSQLVRSGLGEEFWFFAVADAAFKTSALPHEFLGGEIPRERLTGKPFNYDHPRVWGAECFVHQKKQQRVAASKFHPYAKRGIIVGHGRNSPSWHVWLPQESKLVTTVHVTFQPEA-------------------------RILELVGEPEDFTDIDHGRDHEDGTAAEDEATQDPDMDTEDQDQDNPAVGKR--SSPHHGRRASRRL--VHRQRVDYADLHAGCGGGSDTDTSNLVATGPQEPSPTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKVDGSVERYKARLIARGFTQQQGVDFLQTFSPVFGLGVMRSVLATAARHGWAIHSLDFTQAYLNASLQEDIWLELPD-------GHIVKANKALYGLKQSALEWYKELRSTILGEGWSSSANDECLYYRRSENGRVAVLVTYVHDTAFTGDYDEEIKRMRDTLLSTYEGRDLGVPDQLLGVRIATDETG-IILD*LLYTRSIVTEGMGSLDLRITTSPLDPGMDLSAQRDDEEELGCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCMRHWHGLQHVLRYLAGTLDLCIHYAANTDSNDEQVLIR*SDSDWGNDIEMRWSVTGYILLYDGWPIAWRSKQQGTVTLSSAEAEWTAMAQGMRHCIFLRNILGEIDVPQ---QATPWFGDNWGALQAATTTGFSRRTKHVDMKLKCTREYIEQGLFTVQYVPTREQLVDILTKRL 3072
            DSGA  HMT H                 NK  +     G+ +++     G A  + L  VL+VP L   LLS G +   G           H+  A G  ++        LT    G       +       Q      WH  LGH++   + HL         E +V  +  C  C   K    S+ RG  +  K   ++VH+D+ G   P   G   YF  F+++ +R   V  +K K+        Y   MV       VK L  D  GE   S +F   LA+ GIK   +   T + NG+ ER  + L+   R  L+ SG+ +E W  AV  A++  +  P + +GGE P    TG     +H RV+G + +  + + ++    K  P A+  I+VG+      + +W  +E +   + +V F+ ++                         +I + + EP D    DH     DGT   D       +D +++   N    ++  S+   G +A RR   +  +R+   D    C             T   +P    EAL+ PD ++W+ A+  EL  L     +   P   DRK +K  +V++ K+  +G ++R+KARL+A G++Q +G D+ +TFSPV  L  +R++LA A    W IH +D T AYLN +L+E +++E P          +    K+LYGL+QS  EW   L   +  EG + S  D C+Y  + +     ++  YV D     + ++EI   +  L   ++ +DLG    +L +R+  D  G + LD   Y   I+ E  G  D +  +SPLDPG       DD          Y   +  L++L G TRPDLA +   +      P   HW G++H+LRY+  T    + Y    +           D+DW +D   R S +GY+    G  I+W SK+Q +  LS+ EAE+ AM    +  ++L+N + E+   +   +      DN GA+  A     S R+KH+D+K    RE +E+    +QY+ +     D+ TK L
Sbjct:  297 DSGATDHMTSHRTKFKDFKPCESAVETANKESMSVMGRGKVQIQLSEECGGAH-ITLEDVLYVPDLNGNLLSVGRIEERG----------FHVMFAEGKAEVTKDTGELILTATREGRLYSVKESTKSTMMAQTKNPVLWHRRLGHLHYDAVHHL-----CGARENSVKDK--CDTCCLGKLRRSSFPRGDATRAKAPLEIVHSDVVGKITPTSRGGSCYFVTFIDDYSRYTVVYPMKAKNEVLQNFDEY-RRMVENIHNTKVKTLRSDNGGEYV-SKEFNMYLANHGIKHQLTVPGTPEQNGVAERMNQTLLDMTRCLLIESGVTKELWADAVVTASYIRNKCPSKAVGGESPEALWTGGEVKLNHLRVFGCKAWSVRNRPRK--GDKLDPKAEECILVGYPDGVKGYKLWNQKEDRFFVSRNVVFEEDSFPCKLAKSSSSNIEADNDIRNTVLFQIEDSLSEPRDVCCSDH-----DGTENNDAEEVGSSVDEDERVTHNEGAAQQLSSAADQGAQALRRSERLANKRIPKGDCIGCC---------MAKQTNQTDPETLHEALSAPDKEEWKAAIQSELDSLKASNTWELVPRQKDRKVIKCKWVFRKKYDENGHLQRHKARLVACGYSQVEGTDYTETFSPVVKLKSIRTLLAIAVERNWKIHQVDITAAYLNGTLKETVYMEQPQTFVEYEKDEVCLLKKSLYGLRQSGREWNFTLDKLLKSEGMTRSKADPCVYISKKQ----LIVGVYVDDLLIIAEDEKEIANFKSRLGKKFDAKDLGEARHILSIRLKRDRNGGLTLDQTAYAEDIL-ETFGMADAKTASSPLDPGRKYQRINDDSPAREDLQRKYRKAIRALLYLVGGTRPDLAFATTYMSQFIEHPTEEHWSGVKHILRYVKQTNSYALTYKRTGNCVGAYC-----DADWASDKNDRKSFSGYVFTLAGAAISWSSKKQQSTALSTVEAEYIAMCHAAKEALWLQNFMKELHAQEFVHEPQVLLVDNQGAMALAKNQTTSDRSKHIDLKHHFLREKVEEERLQLQYIESSSNPADLFTKPL 1313          
BLAST of mRNA_S-ischiensis_contig109.1950.1 vs. uniprot
Match: UPI001EFFA561 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001EFFA561)

HSP 1 Score: 375 bits (963), Expect = 1.820e-109
Identity = 297/1057 (28.10%), Postives = 494/1057 (46.74%), Query Frame = 1
Query:   16 DSGANIHMTPHLRDLTAGHSVSRTCTFGNKGQLQARAMGETRLEAKTTTGDAALVVLAGVLWVPGLPCRLLSTGALRRNGGEFVDSG----IQDSHLWLATGMPKINLAIKGAFLTLEVAGLTKGATVNATFVNKHQQLTLKEWHEVLGHMNPAVIKHLEKRGLVHVTEATVPSELQCGICKECKSEALSYARGGRSPKT-IGDVVHTDLEGPFHPD-INGMKYFQVFVEEATRDKRVIGLKTKDAATDTTATYVDEMVRE-GVAVKCLSGDGAGELTRSVKFQRMLADQGIKWCKSPRWTLQSNGIPERAIKQLMQAVRSQLVRSGLGEEFWFFAVADAAFKTSALPHEFLGGEIPRERLTGKPFNYDHPRVWGAECFVHQKKQQRVAASKFHPYAKRGIIVGHGRNSPSWHVWLPQESKLVTTVHVTFQPEARILELVGEPEDFT-----------DIDHGRDHEDGTAAEDEATQDPDMDTE-DQDQDNPAVGKRSSPHHG--------RRASRRLVHRQRVDYADLHAGCGGGSDTDTSNLVATGPQEPSPTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKVDGSVERYKARLIARGFTQQQGVDFLQTFSPVFGLGVMRSVLATAARHGWAIHSLDFTQAYLNASLQEDIWLELPDGHIVKAN--------KALYGLKQSALEWYKELRSTILGEGWSSSANDECLYYRRSENGRVAVLVTYVHDTAFTGDYDEEIKRMRDTLLSTYEGRDLGVPDQLLGVRIAT--DETGIILD*LLYTRSIVTEGMGSLDLRITTSPLDPGMDLSAQR---DDEEELGCKLYPYANILGKLMFLAGMTRPDLASSVRELGCRAASPCMRHWHGLQHVLRYLAGTLDLCIHYAANTDSNDEQVLIR*SDSDWGNDIEMRWSVTGYILLYDGWPIAWRSKQQGTVTLSSAEAEWTAMAQGMRHCIFLRNILGEIDVPQQATPWFGDNWGALQAATTTGFSRRTKHVDMKLKCTREYIEQGLFTVQYVPTREQLVDILTK 3066
            D+GA  H+T   +D  + ++     T     +  ++ +G   +  +T+ G    +VL  V + P +   L+S G L   G    + G    +    L +A G  +     +G + T      T    VNA   +K   L    WH+ L H++   +  L K+ L+  ++       +C  C   K   +S+     S KT + ++VH+DL GP     + G  YF  F+++ +R   V  LKTKD        +   + RE G  +KC+  D  GE      F      QGI+  K+P  T Q NG+ ER  + LM+ VR  L  + L   FW  A+  AA   +  P   L G++P +   GK  +YDH RV+G + FVH  K +R   SK     ++ I VG+G +   + ++ P E KLV +  + F  E + +E + + E              ++ H   H+ G   + +  QD   D   D D +N  V      H          RR++R+ V   R    +               ++ T   EP   +EA+      +W EAM  E++ L     +     P   K +K  +V+K+K +      RYKARL+ +GF Q++G+DF + FSPV  +  +R+VL  AA     I  +D   A+L+  L+E+I++E P+G  VK          K+LYGLKQ+  +WYK+    +  +G+  +++D C++ ++  +    +L+ YV D    G    +I  +++ L  ++  +DLG   Q+LG+RI    DE  I L    Y   ++ E     + +  ++PL   M LS +      EE+      PY++++G LM+    TRPD+A +V  +     +P   HW  ++ +LRYL G+ D C+ +  ++      +L   +D+D   D++ R S TGY+  + G  I+W+SK Q  V LS+ EAE+ A  +  +  I+L+  L E+ + Q     + D+  A+  +  + +  RTKH+D++    RE IE     ++ + T E   D+LTK
Sbjct:   60 DTGAASHVT-FRKDFFSAYTPGDFGTLSMGNETVSKVVGIGTICLETSVGTK--LVLNNVKYAPDVRLHLISVGVLDDEGYVSTNGGGKWKLIKGSLVVARGEKR-----RGLYWT---TASTCANMVNAVEDDKSSTL----WHKRLSHISEKGLNVLAKKKLL--SDCKGAKLEKCEHCLAGKQNRVSFKSNPPSRKTELLELVHSDLCGPMKTKTLGGALYFVTFIDDCSRKLWVYVLKTKDQVLGVFKQFQASVERETGKKLKCIRTDNGGEYCGP--FDEYCKHQGIRHQKTPPKTPQLNGLAERMNRTLMERVRCLLSEAKLPNSFWGEALLTAAHVINLSPTVALQGDVPNKVWYGKDVSYDHLRVFGCKAFVHVPKDER---SKLDAKTRQCIFVGYGLDEFGYRLYDPIEKKLVRSRDIVFM-ENQTIEDIEKAEKLESSSSDGVVHIDEVPHASVHDVGGLDDRDEAQDHVQDQHVDIDNNNDGVINDPPAHEVVDEPNIPLRRSTRQRVPSSRYSSNEY--------------MLLTDGGEPECYKEAMEDEHRGQWIEAMQDEMKSLHENHTYELVKLPKGMKALKNKWVFKVKIEEHTQKPRYKARLVVKGFGQRKGIDFDEIFSPVVKMSSIRTVLGLAASLNLEIEQMDVKTAFLHGDLEEEIYMEQPEGFKVKGKENFVCKLKKSLYGLKQAPRQWYKKFEFVMGEQGYKKTSSDHCVFVQKFSDNDFIILLLYVDDMLIVGKDTSKIDELKNELCKSFSMKDLGHAKQILGMRITRLRDERKIYLSQKKYIERVL-ERFNMKNAKPVSTPLASHMKLSKKMCPTTKEEKENMAKIPYSSVVGSLMYAMVCTRPDIAHAVGVVSRFLDNPGKEHWEAVKWILRYLRGSSDECLCFRGSS-----PILKGYTDADMAGDLDNRKSTTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATEASKEMIWLKQFLQELGLQQIEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREKIEDKSMQIEKISTNENPADMLTK 1073          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig109.1950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151R6U8_CAJCA6.860e-11529.16Retrovirus-related Pol polyprotein from transposon... [more]
A0A2P6SP23_ROSCH2.260e-11328.40Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A6A3C690_HIBSY1.310e-11127.83Protein STRUBBELIG-RECEPTOR FAMILY 8 n=1 Tax=Hibis... [more]
H6U1F0_CITSI1.320e-11128.54Polyprotein n=2 Tax=Citrus sinensis TaxID=2711 Rep... [more]
Q9ZRJ0_TOBAC2.700e-11127.40Retrotransposon Tto1 DNA n=2 Tax=Nicotiana tabacum... [more]
A0A438E432_VITVI3.750e-11128.40Retrovirus-related Pol polyprotein from transposon... [more]
A0A0A9W6P7_LYGHE1.060e-11027.62Retrovirus-related Pol polyprotein from transposon... [more]
B8YLY7_LOTJA1.180e-11028.41Gag-Pol polyprotein n=1 Tax=Lotus japonicus TaxID=... [more]
A0A131XNF9_9ACAR4.680e-11027.56Putative polyprotein (Fragment) n=1 Tax=Hyalomma e... [more]
UPI001EFFA5611.820e-10928.10DDE-type integrase/transposase/recombinase n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig109contigS-ischiensis_contig109:186407..189547 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score275.4
Seed ortholog evalue8e-71
Seed eggNOG ortholog15368.BRADI4G29802.1
EggNOG free text desc.lipid metabolic process
EggNOG OGs37V5Q@33090,3GFFK@35493,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size3078
Cds size2280
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig109.1950.1prot_S-ischiensis_contig109.1950.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig109 186443..188785 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815575.3603349-UTR-S-ischiensis_contig109:186406..1864421622815575.3603349-UTR-S-ischiensis_contig109:186406..186442Schizocladia ischiensis KU_0333UTRS-ischiensis_contig109 186407..186442 +
1695739779.857399-UTR-S-ischiensis_contig109:186406..1864421695739779.857399-UTR-S-ischiensis_contig109:186406..186442Schizocladia ischiensis KU_0333UTRS-ischiensis_contig109 186407..186442 +
1622815575.404572-UTR-S-ischiensis_contig109:188785..1895471622815575.404572-UTR-S-ischiensis_contig109:188785..189547Schizocladia ischiensis KU_0333UTRS-ischiensis_contig109 188786..189547 +
1695739779.887861-UTR-S-ischiensis_contig109:188785..1895471695739779.887861-UTR-S-ischiensis_contig109:188785..189547Schizocladia ischiensis KU_0333UTRS-ischiensis_contig109 188786..189547 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815575.376175-CDS-S-ischiensis_contig109:186442..1879751622815575.376175-CDS-S-ischiensis_contig109:186442..187975Schizocladia ischiensis KU_0333CDSS-ischiensis_contig109 186443..187975 +
1695739779.868385-CDS-S-ischiensis_contig109:186442..1879751695739779.868385-CDS-S-ischiensis_contig109:186442..187975Schizocladia ischiensis KU_0333CDSS-ischiensis_contig109 186443..187975 +
1622815575.3892043-CDS-S-ischiensis_contig109:188038..1887851622815575.3892043-CDS-S-ischiensis_contig109:188038..188785Schizocladia ischiensis KU_0333CDSS-ischiensis_contig109 188039..188785 +
1695739779.8774397-CDS-S-ischiensis_contig109:188038..1887851695739779.8774397-CDS-S-ischiensis_contig109:188038..188785Schizocladia ischiensis KU_0333CDSS-ischiensis_contig109 188039..188785 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig109.1950.1

>prot_S-ischiensis_contig109.1950.1 ID=prot_S-ischiensis_contig109.1950.1|Name=mRNA_S-ischiensis_contig109.1950.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=760bp
MTPHLRDLTAGHSVSRTCTFGNKGQLQARAMGETRLEAKTTTGDAALVVL
AGVLWVPGLPCRLLSTGALRRNGGEFVDSGIQDSHLWLATGMPKINLAIK
GAFLTLEVAGLTKGATVNATFVNKHQQLTLKEWHEVLGHMNPAVIKHLEK
RGLVHVTEATVPSELQCGICKECKSEALSYARGGRSPKTIGDVVHTDLEG
PFHPDINGMKYFQVFVEEATRDKRVIGLKTKDAATDTTATYVDEMVREGV
AVKCLSGDGAGELTRSVKFQRMLADQGIKWCKSPRWTLQSNGIPERAIKQ
LMQAVRSQLVRSGLGEEFWFFAVADAAFKTSALPHEFLGGEIPRERLTGK
PFNYDHPRVWGAECFVHQKKQQRVAASKFHPYAKRGIIVGHGRNSPSWHV
WLPQESKLVTTVHVTFQPEARILELVGEPEDFTDIDHGRDHEDGTAAEDE
ATQDPDMDTEDQDQDNPAVGKRSSPHHGRRASRRLVHRQRVDYADLHAGC
GGGSDTDTSNLVATGPQEPSPTREALAGPDADKWQEAMDKELQGLWNKGA
FSDEPAPPDRKPVKTHYVYKIKHKVDGSVERYKARLIARGFTQQQGVDFL
QTFSPVFGLGVMRSVLATAARHGWAIHSLDFTQAYLNASLQEDIWLELPD
GHIVKANKALYGLKQSALEWYKELRSTILGEGWSSSANDECLYYRRSENG
RVAVLVTYVHDTAFTGDYDEEIKRMRDTLLSTYEGRDLGVPDQLLGVRIA
TDETGIILD*
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mRNA from alignment at S-ischiensis_contig109:186407..189547+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig109.1950.1 ID=mRNA_S-ischiensis_contig109.1950.1|Name=mRNA_S-ischiensis_contig109.1950.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3141bp|location=Sequence derived from alignment at S-ischiensis_contig109:186407..189547+ (Schizocladia ischiensis KU_0333)
ATTACTCTCCTTTGCGACTCCGGCGCCAACATCCACATGACTCCCCATCT CCGGGACTTGACGGCAGGGCACTCGGTAAGCCGTACTTGTACCTTTGGCA ACAAAGGGCAACTGCAAGCTCGGGCGATGGGGGAGACGCGGTTGGAGGCA AAGACGACCACTGGAGACGCTGCGCTGGTCGTACTAGCTGGTGTACTCTG GGTCCCTGGACTGCCCTGCCGGCTTTTGAGCACGGGAGCCCTCCGCCGCA ATGGCGGAGAGTTTGTGGACTCCGGGATCCAAGACAGCCATCTGTGGCTG GCAACCGGCATGCCGAAGATCAACCTGGCCATCAAGGGGGCGTTCTTGAC GCTGGAGGTGGCGGGTTTGACCAAGGGGGCCACGGTAAATGCCACTTTTG TGAACAAGCACCAACAGCTGACACTGAAGGAGTGGCACGAGGTCTTGGGA CACATGAACCCGGCGGTGATCAAGCATCTGGAGAAGCGTGGGCTTGTCCA CGTCACAGAGGCCACCGTCCCTTCCGAGCTGCAGTGCGGCATCTGTAAGG AGTGCAAGTCGGAGGCCCTCAGCTACGCGCGTGGCGGGAGGAGCCCCAAG ACTATTGGTGACGTGGTGCACACCGACCTGGAGGGACCTTTTCACCCGGA CATCAACGGCATGAAGTACTTTCAAGTCTTTGTGGAGGAGGCCACCCGTG ACAAGCGGGTCATCGGGCTCAAGACGAAGGACGCGGCCACGGACACAACG GCCACTTACGTCGACGAGATGGTGCGTGAAGGGGTGGCGGTCAAGTGCCT CAGCGGTGATGGGGCAGGGGAACTCACTCGGTCTGTGAAGTTTCAACGCA TGCTGGCGGACCAGGGGATCAAGTGGTGCAAATCTCCACGGTGGACACTG CAGAGCAACGGGATACCGGAGCGGGCGATCAAGCAGCTGATGCAAGCCGT GCGGAGCCAGCTGGTGAGGTCTGGACTGGGAGAGGAGTTCTGGTTCTTCG CAGTGGCTGACGCTGCCTTCAAGACCAGTGCCTTGCCCCACGAGTTCCTC GGGGGCGAGATACCACGCGAAAGACTTACTGGCAAGCCCTTCAACTACGA CCATCCGCGGGTCTGGGGAGCAGAGTGCTTTGTACACCAGAAAAAGCAGC AGCGAGTTGCGGCGTCCAAGTTCCACCCGTACGCCAAGCGAGGCATCATC GTGGGGCACGGCCGGAACTCTCCTTCCTGGCACGTGTGGCTGCCCCAGGA GAGCAAGCTGGTGACCACCGTGCACGTGACGTTTCAACCGGAAGCACGCA TCTTGGAGCTGGTGGGGGAGCCCGAAGACTTCACCGACATCGACCACGGC CGTGACCACGAGGATGGTACCGCAGCAGAAGATGAGGCAACTCAAGACCC GGACATGGACACGGAGGATCAAGACCAAGACAACCCGGCTGTGGGAAAGC GGTCCTCCCCGCATCATGGCAGGCGTGCTTCCCGGCGGCTTGTGCACCGC CAGAGGGTGGACTACGCAGACCTGCACGCAGGCTGTGGTGGAGGCAGCGA CACGGACACAAGCAACCTGGTGAGCACTATATCTCAAGATGGAGGCGGCG ACGCCCTCTGTCCACTGGGGCTTGCTGGCGAGGTGGCAACCGGTCCCCAA GAGCCGTCTCCAACGAGGGAGGCGTTGGCGGGACCGGATGCAGACAAGTG GCAGGAGGCGATGGACAAGGAGTTGCAAGGCCTGTGGAACAAGGGTGCCT TCAGTGACGAGCCTGCACCGCCGGACCGGAAGCCAGTCAAGACCCACTAC GTGTACAAGATCAAGCACAAGGTGGACGGGAGCGTGGAGCGGTATAAGGC ACGACTCATTGCGAGAGGCTTCACTCAGCAACAAGGCGTGGACTTCTTAC AGACCTTCAGCCCCGTGTTTGGCCTTGGCGTGATGCGGTCGGTCTTGGCC ACCGCTGCGCGTCACGGATGGGCCATTCACTCCCTGGACTTCACCCAAGC ATACCTGAATGCGTCTCTTCAAGAAGACATCTGGCTCGAGCTACCGGACG GGCACATCGTCAAGGCAAACAAGGCGCTCTACGGCTTGAAGCAATCTGCT CTGGAGTGGTACAAGGAGCTACGGAGCACAATCCTGGGGGAGGGCTGGAG CAGCAGTGCCAACGACGAGTGTCTCTACTACCGCCGGAGCGAAAACGGGC GTGTTGCCGTACTAGTGACGTATGTCCACGACACTGCCTTCACCGGCGAC TACGACGAGGAGATCAAGAGAATGAGGGACACACTACTTTCTACGTACGA GGGGCGAGACTTGGGCGTACCTGATCAACTGCTGGGAGTGCGGATTGCCA CGGACGAGACGGGAATCATCCTGGATTAGCTACTGTACACGAGGAGCATC GTCACCGAGGGCATGGGATCTCTGGACCTGCGGATCACAACTTCACCGCT CGACCCTGGCATGGACCTGTCTGCACAACGCGATGACGAGGAGGAGCTGG GCTGCAAGCTGTATCCGTATGCTAACATCCTGGGCAAGCTCATGTTCCTG GCGGGGATGACTCGGCCCGACCTGGCCAGCAGTGTGCGGGAGCTTGGGTG CCGTGCAGCGTCCCCGTGCATGAGACACTGGCATGGACTGCAACATGTGC TGCGGTATCTCGCCGGAACACTGGACCTGTGCATCCACTACGCGGCCAAC ACGGACAGCAATGACGAGCAAGTCCTCATCCGCTAATCGGACTCCGACTG GGGCAATGACATCGAAATGCGGTGGAGTGTGACGGGGTACATCCTACTCT ACGATGGATGGCCAATTGCGTGGCGGTCCAAGCAGCAAGGCACCGTCACT CTGTCAAGCGCGGAGGCAGAGTGGACGGCGATGGCGCAAGGAATGCGGCA CTGCATTTTCCTCCGCAACATACTGGGGGAGATTGACGTGCCGCAACAAG CTACACCGTGGTTTGGGGACAATTGGGGTGCACTCCAAGCGGCGACTACC ACCGGCTTCAGCAGACGCACCAAGCATGTGGACATGAAGCTCAAGTGCAC GCGCGAGTACATAGAGCAGGGCCTCTTCACCGTCCAGTACGTGCCAACAA GGGAGCAACTGGTGGACATCCTGACCAAGCGTCTGCGCAAG
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Coding sequence (CDS) from alignment at S-ischiensis_contig109:186407..189547+

>mRNA_S-ischiensis_contig109.1950.1 ID=mRNA_S-ischiensis_contig109.1950.1|Name=mRNA_S-ischiensis_contig109.1950.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=4560bp|location=Sequence derived from alignment at S-ischiensis_contig109:186407..189547+ (Schizocladia ischiensis KU_0333)
ATGACTCCCCATCTCCGGGACTTGACGGCAGGGCACTCGGTAAGCCGTAC
TTGTACCTTTGGCAACAAAGGGCAACTGCAAGCTCGGGCGATGGGGGAGA
CGCGGTTGGAGGCAAAGACGACCACTGGAGACGCTGCGCTGGTCGTACTA
GCTGGTGTACTCTGGGTCCCTGGACTGCCCTGCCGGCTTTTGAGCACGGG
AGCCCTCCGCCGCAATGGCGGAGAGTTTGTGGACTCCGGGATCCAAGACA
GCCATCTGTGGCTGGCAACCGGCATGCCGAAGATCAACCTGGCCATCAAG
GGGGCGTTCTTGACGCTGGAGGTGGCGGGTTTGACCAAGGGGGCCACGGT
AAATGCCACTTTTGTGAACAAGCACCAACAGCTGACACTGAAGGAGTGGC
ACGAGGTCTTGGGACACATGAACCCGGCGGTGATCAAGCATCTGGAGAAG
CGTGGGCTTGTCCACGTCACAGAGGCCACCGTCCCTTCCGAGCTGCAGTG
CGGCATCTGTAAGGAGTGCAAGTCGGAGGCCCTCAGCTACGCGCGTGGCG
GGAGGAGCCCCAAGACTATTGGTGACGTGGTGCACACCGACCTGGAGGGA
CCTTTTCACCCGGACATCAACGGCATGAAGTACTTTCAAGTCTTTGTGGA
GGAGGCCACCCGTGACAAGCGGGTCATCGGGCTCAAGACGAAGGACGCGG
CCACGGACACAACGGCCACTTACGTCGACGAGATGGTGCGTGAAGGGGTG
GCGGTCAAGTGCCTCAGCGGTGATGGGGCAGGGGAACTCACTCGGTCTGT
GAAGTTTCAACGCATGCTGGCGGACCAGGGGATCAAGTGGTGCAAATCTC
CACGGTGGACACTGCAGAGCAACGGGATACCGGAGCGGGCGATCAAGCAG
CTGATGCAAGCCGTGCGGAGCCAGCTGGTGAGGTCTGGACTGGGAGAGGA
GTTCTGGTTCTTCGCAGTGGCTGACGCTGCCTTCAAGACCAGTGCCTTGC
CCCACGAGTTCCTCGGGGGCGAGATACCACGCGAAAGACTTACTGGCAAG
CCCTTCAACTACGACCATCCGCGGGTCTGGGGAGCAGAGTGCTTTGTACA
CCAGAAAAAGCAGCAGCGAGTTGCGGCGTCCAAGTTCCACCCGTACGCCA
AGCGAGGCATCATCGTGGGGCACGGCCGGAACTCTCCTTCCTGGCACGTG
TGGCTGCCCCAGGAGAGCAAGCTGGTGACCACCGTGCACGTGACGTTTCA
ACCGGAAGCACGCATCTTGGAGCTGGTGGGGGAGCCCGAAGACTTCACCG
ACATCGACCACGGCCGTGACCACGAGGATGGTACCGCAGCAGAAGATGAG
GCAACTCAAGACCCGGACATGGACACGGAGGATCAAGACCAAGACAACCC
GGCTGTGGGAAAGCGGTCCTCCCCGCATCATGGCAGGCGTGCTTCCCGGC
GGCTTGTGCACCGCCAGAGGGTGGACTACGCAGACCTGCACGCAGGCTGT
GGTGGAGGCAGCGACACGGACACAAGCAACCTGATGACTCCCCATCTCCG
GGACTTGACGGCAGGGCACTCGGTAAGCCGTACTTGTACCTTTGGCAACA
AAGGGCAACTGCAAGCTCGGGCGATGGGGGAGACGCGGTTGGAGGCAAAG
ACGACCACTGGAGACGCTGCGCTGGTCGTACTAGCTGGTGTACTCTGGGT
CCCTGGACTGCCCTGCCGGCTTTTGAGCACGGGAGCCCTCCGCCGCAATG
GCGGAGAGTTTGTGGACTCCGGGATCCAAGACAGCCATCTGTGGCTGGCA
ACCGGCATGCCGAAGATCAACCTGGCCATCAAGGGGGCGTTCTTGACGCT
GGAGGTGGCGGGTTTGACCAAGGGGGCCACGGTAAATGCCACTTTTGTGA
ACAAGCACCAACAGCTGACACTGAAGGAGTGGCACGAGGTCTTGGGACAC
ATGAACCCGGCGGTGATCAAGCATCTGGAGAAGCGTGGGCTTGTCCACGT
CACAGAGGCCACCGTCCCTTCCGAGCTGCAGTGCGGCATCTGTAAGGAGT
GCAAGTCGGAGGCCCTCAGCTACGCGCGTGGCGGGAGGAGCCCCAAGACT
ATTGGTGACGTGGTGCACACCGACCTGGAGGGACCTTTTCACCCGGACAT
CAACGGCATGAAGTACTTTCAAGTCTTTGTGGAGGAGGCCACCCGTGACA
AGCGGGTCATCGGGCTCAAGACGAAGGACGCGGCCACGGACACAACGGCC
ACTTACGTCGACGAGATGGTGCGTGAAGGGGTGGCGGTCAAGTGCCTCAG
CGGTGATGGGGCAGGGGAACTCACTCGGTCTGTGAAGTTTCAACGCATGC
TGGCGGACCAGGGGATCAAGTGGTGCAAATCTCCACGGTGGACACTGCAG
AGCAACGGGATACCGGAGCGGGCGATCAAGCAGCTGATGCAAGCCGTGCG
GAGCCAGCTGGTGAGGTCTGGACTGGGAGAGGAGTTCTGGTTCTTCGCAG
TGGCTGACGCTGCCTTCAAGACCAGTGCCTTGCCCCACGAGTTCCTCGGG
GGCGAGATACCACGCGAAAGACTTACTGGCAAGCCCTTCAACTACGACCA
TCCGCGGGTCTGGGGAGCAGAGTGCTTTGTACACCAGAAAAAGCAGCAGC
GAGTTGCGGCGTCCAAGTTCCACCCGTACGCCAAGCGAGGCATCATCGTG
GGGCACGGCCGGAACTCTCCTTCCTGGCACGTGTGGCTGCCCCAGGAGAG
CAAGCTGGTGACCACCGTGCACGTGACGTTTCAACCGGAAGCACGCATCT
TGGAGCTGGTGGGGGAGCCCGAAGACTTCACCGACATCGACCACGGCCGT
GACCACGAGGATGGTACCGCAGCAGAAGATGAGGCAACTCAAGACCCGGA
CATGGACACGGAGGATCAAGACCAAGACAACCCGGCTGTGGGAAAGCGGT
CCTCCCCGCATCATGGCAGGCGTGCTTCCCGGCGGCTTGTGCACCGCCAG
AGGGTGGACTACGCAGACCTGCACGCAGGCTGTGGTGGAGGCAGCGACAC
GGACACAAGCAACCTGGTGGCAACCGGTCCCCAAGAGCCGTCTCCAACGA
GGGAGGCGTTGGCGGGACCGGATGCAGACAAGTGGCAGGAGGCGATGGAC
AAGGAGTTGCAAGGCCTGTGGAACAAGGGTGCCTTCAGTGACGAGCCTGC
ACCGCCGGACCGGAAGCCAGTCAAGACCCACTACGTGTACAAGATCAAGC
ACAAGGTGGACGGGAGCGTGGAGCGGTATAAGGCACGACTCATTGCGAGA
GGCTTCACTCAGCAACAAGGCGTGGACTTCTTACAGACCTTCAGCCCCGT
GTTTGGCCTTGGCGTGATGCGGTCGGTCTTGGCCACCGCTGCGCGTCACG
GATGGGCCATTCACTCCCTGGACTTCACCCAAGCATACCTGAATGCGTCT
CTTCAAGAAGACATCTGGCTCGAGCTACCGGACGGGCACATCGTCAAGGC
AAACAAGGCGCTCTACGGCTTGAAGCAATCTGCTCTGGAGTGGTACAAGG
AGCTACGGAGCACAATCCTGGGGGAGGGCTGGAGCAGCAGTGCCAACGAC
GAGTGTCTCTACTACCGCCGGAGCGAAAACGGGCGTGTTGCCGTACTAGT
GACGTATGTCCACGACACTGCCTTCACCGGCGACTACGACGAGGAGATCA
AGAGAATGAGGGACACACTACTTTCTACGTACGAGGGGCGAGACTTGGGC
GTACCTGATCAACTGCTGGGAGTGCGGATTGCCACGGACGAGACGGGAAT
CATCCTGGATTAGGTGGCAACCGGTCCCCAAGAGCCGTCTCCAACGAGGG
AGGCGTTGGCGGGACCGGATGCAGACAAGTGGCAGGAGGCGATGGACAAG
GAGTTGCAAGGCCTGTGGAACAAGGGTGCCTTCAGTGACGAGCCTGCACC
GCCGGACCGGAAGCCAGTCAAGACCCACTACGTGTACAAGATCAAGCACA
AGGTGGACGGGAGCGTGGAGCGGTATAAGGCACGACTCATTGCGAGAGGC
TTCACTCAGCAACAAGGCGTGGACTTCTTACAGACCTTCAGCCCCGTGTT
TGGCCTTGGCGTGATGCGGTCGGTCTTGGCCACCGCTGCGCGTCACGGAT
GGGCCATTCACTCCCTGGACTTCACCCAAGCATACCTGAATGCGTCTCTT
CAAGAAGACATCTGGCTCGAGCTACCGGACGGGCACATCGTCAAGGCAAA
CAAGGCGCTCTACGGCTTGAAGCAATCTGCTCTGGAGTGGTACAAGGAGC
TACGGAGCACAATCCTGGGGGAGGGCTGGAGCAGCAGTGCCAACGACGAG
TGTCTCTACTACCGCCGGAGCGAAAACGGGCGTGTTGCCGTACTAGTGAC
GTATGTCCACGACACTGCCTTCACCGGCGACTACGACGAGGAGATCAAGA
GAATGAGGGACACACTACTTTCTACGTACGAGGGGCGAGACTTGGGCGTA
CCTGATCAACTGCTGGGAGTGCGGATTGCCACGGACGAGACGGGAATCAT
CCTGGATTAG
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