|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 2 |
| Model size | 802 |
| Cds size | 798 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815573.6941142-CDS-S-ischiensis_contig109:72871..73068 | 1622815573.6941142-CDS-S-ischiensis_contig109:72871..73068 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig109 72872..73068 + |
| 1695739778.8474126-CDS-S-ischiensis_contig109:72871..73068 | 1695739778.8474126-CDS-S-ischiensis_contig109:72871..73068 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig109 72872..73068 + |
| 1622815573.7075279-CDS-S-ischiensis_contig109:73870..74471 | 1622815573.7075279-CDS-S-ischiensis_contig109:73870..74471 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig109 73871..74471 + |
| 1695739778.8569148-CDS-S-ischiensis_contig109:73870..74471 | 1695739778.8569148-CDS-S-ischiensis_contig109:73870..74471 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig109 73871..74471 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig109.1939.1 >prot_S-ischiensis_contig109.1939.1 ID=prot_S-ischiensis_contig109.1939.1|Name=mRNA_S-ischiensis_contig109.1939.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=266bp
GRRGGVSAAVLWRFKHERNATDATRAFQSPSPAPPHPRGGGASSGAANGA
RVAPAEPRRSGRVRRRPPRMPYSDTSSSDCSNQDTASGPGTAHTRAPPAA
AQGGRKAPGAGKLNVAGGVAGPSVQAPGQSQQSQSPSHSRERDSAGRSNV
AGVVAGASVQAPGQSLPRSQSLSHSRERALARARARGLPSASPQGAGKGK
VAPPAATSSTARGGAGRGAGVRVSGTRGARTLVLGLGSSSSSQVDAKHVR
RVKGAPRERASVVGRT back to topmRNA from alignment at S-ischiensis_contig109:72872..74473+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig109.1939.1 ID=mRNA_S-ischiensis_contig109.1939.1|Name=mRNA_S-ischiensis_contig109.1939.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1602bp|location=Sequence derived from alignment at S-ischiensis_contig109:72872..74473+ (Schizocladia ischiensis KU_0333)
GGGAGACGCGGGGGGGTGTCTGCCGCGGTCCTTTGGCGTTTCAAGCATGA
GCGCAATGCCACAGATGCCACGCGCGCCTTCCAGTCGCCGTCTCCCGCAC
CCCCACACCCAAGGGGCGGAGGAGCGTCGAGCGGGGCGGCAAACGGTGCA
CGCGTAGCGCCAGCGGAGCCGCGGCGGTCGGGGCGGGTCAGGCGCAGGCG
AGTGCCATGTTGCTTGCTGTATATTGCAGCAGTGAGACTCAGACTAGGTA
CCATGTTGGGCTGCTGCAGTACAGTATTGACAGGAACAACACAGGACGCG
GTGCAGGCCACGTCACTAAAGACCTCAGCAGTGGCCCTTCCTTGTACTTC
AAAGTAGACATTTGTACTCACAATGTGCTTTGCGCAGTCCAGAGACAATG
TTCTACTGCTCGTGCTGTCTCTCTCTATACTCATTGGCTTGTCTTGCGAC
ATAACCTTGTGTGCATTGCTGACAGCCCTGAGTCGAAACTTAGGGTTTGC
CCTCCGGGGAGTAGCTATTTAGCCATGGATTCTCGCGTCCCAATTAGGCG
GGGACGCTGTTGAGTAGGACATTGTGTCTGTGTGCCGCTGTTCAGCGCGA
ACTCTTGGCACACACACTGTACTGTACAGCTGTAGTGCGCTTTGCGCCAG
TTGGCAGCTGCAGTACGAGCACGAGTACACTGTACGTCCTCCATGCCGGA
TTAGTACTGTAGAGCCACTTTTTGACAGACTCAGACCGTGCGATACAGTC
GATCGGTACTTCAAATATATATGCAATACCACATATCGACGTAAATCCTA
CATCCTGAAGTCCCCGTCAAGCCCAACCGAACAGCAAACCGAGCTCTCTC
CTATCCTCTCCCCCTCCTCCCTCTCTCTCTCTCTCACACACACACACACT
TTTTCTCCTACTTTGCTCTCTCCTCCCCTCTCTCTGCTCTCACTCCACCT
ATCTCCCATTCGCCCGCACGACACCCCCACCGCCGCCCGCGCCACACAGG
CCCCCCCGCATGCCCTACTCCGACACCAGCAGCAGCGACTGCAGCAATCA
AGACACTGCCTCCGGCCCTGGCACCGCTCACACCCGAGCCCCCCCCGCAG
CGGCCCAGGGCGGCCGCAAAGCGCCCGGTGCCGGGAAGCTGAACGTGGCT
GGGGGCGTGGCCGGTCCCTCGGTCCAAGCGCCAGGACAGTCACAACAGTC
ACAGTCCCCGTCACACAGCCGGGAAAGGGACAGTGCTGGGAGGTCTAACG
TGGCTGGGGTGGTGGCAGGTGCCTCGGTCCAAGCTCCAGGACAGTCACTG
CCCCGGTCACAATCGCTGTCTCACAGCCGGGAACGGGCCCTGGCCCGGGC
CCGGGCCCGGGGACTGCCATCAGCATCGCCCCAGGGGGCGGGAAAGGGAA
AGGTGGCACCCCCGGCTGCTACTAGTAGTACGGCACGGGGGGGGGCGGGG
CGCGGTGCAGGCGTGAGAGTGTCTGGCACGCGGGGGGCGCGAACGCTGGT
CCTGGGCTTGGGCTCGTCCTCCTCCAGCCAGGTGGATGCGAAGCACGTGA
GGCGAGTCAAGGGTGCGCCACGTGAGCGGGCGAGTGTGGTTGGGAGAACC
GC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig109:72872..74473+ >mRNA_S-ischiensis_contig109.1939.1 ID=mRNA_S-ischiensis_contig109.1939.1|Name=mRNA_S-ischiensis_contig109.1939.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1596bp|location=Sequence derived from alignment at S-ischiensis_contig109:72872..74473+ (Schizocladia ischiensis KU_0333)
GGGAGACGCGGGGGGGTGTCTGCCGCGGTCCTTTGGCGTTTCAAGCATGA
GCGCAATGCCACAGATGCCACGCGCGCCTTCCAGTCGCCGTCTCCCGCAC
CCCCACACCCAAGGGGCGGAGGAGCGTCGAGCGGGGCGGCAAACGGTGCA
CGCGTAGCGCCAGCGGAGCCGCGGCGGTCGGGGCGGGTCAGGCGCAGGGG
AGACGCGGGGGGGTGTCTGCCGCGGTCCTTTGGCGTTTCAAGCATGAGCG
CAATGCCACAGATGCCACGCGCGCCTTCCAGTCGCCGTCTCCCGCACCCC
CACACCCAAGGGGCGGAGGAGCGTCGAGCGGGGCGGCAAACGGTGCACGC
GTAGCGCCAGCGGAGCCGCGGCGGTCGGGGCGGGTCAGGCGCAGGCCCCC
CCGCATGCCCTACTCCGACACCAGCAGCAGCGACTGCAGCAATCAAGACA
CTGCCTCCGGCCCTGGCACCGCTCACACCCGAGCCCCCCCCGCAGCGGCC
CAGGGCGGCCGCAAAGCGCCCGGTGCCGGGAAGCTGAACGTGGCTGGGGG
CGTGGCCGGTCCCTCGGTCCAAGCGCCAGGACAGTCACAACAGTCACAGT
CCCCGTCACACAGCCGGGAAAGGGACAGTGCTGGGAGGTCTAACGTGGCT
GGGGTGGTGGCAGGTGCCTCGGTCCAAGCTCCAGGACAGTCACTGCCCCG
GTCACAATCGCTGTCTCACAGCCGGGAACGGGCCCTGGCCCGGGCCCGGG
CCCGGGGACTGCCATCAGCATCGCCCCAGGGGGCGGGAAAGGGAAAGGTG
GCACCCCCGGCTGCTACTAGTAGTACGGCACGGGGGGGGGCGGGGCGCGG
TGCAGGCGTGAGAGTGTCTGGCACGCGGGGGGCGCGAACGCTGGTCCTGG
GCTTGGGCTCGTCCTCCTCCAGCCAGGTGGATGCGAAGCACGTGAGGCGA
GTCAAGGGTGCGCCACGTGAGCGGGCGAGTGTGGTTGGGAGAACCGCCCC
CCCGCATGCCCTACTCCGACACCAGCAGCAGCGACTGCAGCAATCAAGAC
ACTGCCTCCGGCCCTGGCACCGCTCACACCCGAGCCCCCCCCGCAGCGGC
CCAGGGCGGCCGCAAAGCGCCCGGTGCCGGGAAGCTGAACGTGGCTGGGG
GCGTGGCCGGTCCCTCGGTCCAAGCGCCAGGACAGTCACAACAGTCACAG
TCCCCGTCACACAGCCGGGAAAGGGACAGTGCTGGGAGGTCTAACGTGGC
TGGGGTGGTGGCAGGTGCCTCGGTCCAAGCTCCAGGACAGTCACTGCCCC
GGTCACAATCGCTGTCTCACAGCCGGGAACGGGCCCTGGCCCGGGCCCGG
GCCCGGGGACTGCCATCAGCATCGCCCCAGGGGGCGGGAAAGGGAAAGGT
GGCACCCCCGGCTGCTACTAGTAGTACGGCACGGGGGGGGGCGGGGCGCG
GTGCAGGCGTGAGAGTGTCTGGCACGCGGGGGGCGCGAACGCTGGTCCTG
GGCTTGGGCTCGTCCTCCTCCAGCCAGGTGGATGCGAAGCACGTGAGGCG
AGTCAAGGGTGCGCCACGTGAGCGGGCGAGTGTGGTTGGGAGAACC back to top
|