mRNA_S-ischiensis_contig108.1923.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig108.1923.1
Unique NamemRNA_S-ischiensis_contig108.1923.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig108.1923.1 vs. uniprot
Match: A0A835ZJI0_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJI0_9STRA)

HSP 1 Score: 318 bits (814), Expect = 3.050e-106
Identity = 151/210 (71.90%), Postives = 184/210 (87.62%), Query Frame = 1 
Query:  223 RTPIIAGNWKMNPLELSSAQDLAAKVAELTKGVEGVEVCVIPSHPFLVPVKEKLEGSKVTLGAQNLYIEERGAFTGAVSTSMLKSVGCEYVLCGHSERRVIFHDDDFVVNRKMRKVLDAGMKPILCIGESREEYEAGLDQDVCAVQLGKDLAGVSAEEMERVVIAYEPVWAIGTGLTATPEIAQGVHAYIRSWLAGKYGQAVADGVRIQY 852
            RTPII GNWKMNP +++SA  LAA VA  TKG+EGVEV +IP +PF+ PV++ L+GS +T+GAQN ++E++GAFTGAVST+ML SVGCEYVLCGHSERR IF +D+ ++N K+ KVL   M+PILCIGES+EEYE+GL+++VCAVQLGK+LAGV+AE+M+ VVIAYEPVWAIGTGL ATPE+AQ VHAYIRSWLAGKYGQAVAD VRIQY
Sbjct:    4 RTPIITGNWKMNPGDMASAVQLAADVAAQTKGLEGVEVGIIPPYPFVPPVRDALKGSGITVGAQNAFVEDKGAFTGAVSTTMLLSVGCEYVLCGHSERRTIFKEDNALINSKVLKVLSKNMRPILCIGESKEEYESGLNKEVCAVQLGKNLAGVTAEQMKDVVIAYEPVWAIGTGLVATPEVAQSVHAYIRSWLAGKYGQAVADDVRIQY 213
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BLAST of mRNA_S-ischiensis_contig108.1923.1 vs. uniprot
Match: A0A7S4D8V7_HETAK (Triosephosphate isomerase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8V7_HETAK)

HSP 1 Score: 295 bits (756), Expect = 3.340e-96
Identity = 147/211 (69.67%), Postives = 171/211 (81.04%), Query Frame = 1 
Query:  223 RTPIIAGNWKMNPLELSSAQDLAAKVAELTKGVEG-VEVCVIPSHPFLVPVKEKLEGSKVTLGAQNLYIEERGAFTGAVSTSMLKSVGCEYVLCGHSERRVIFHDDDFVVNRKMRKVLDAGMKPILCIGESREEYEAGLDQDVCAVQLGKDLAGVSAEEMERVVIAYEPVWAIGTGLTATPEIAQGVHAYIRSWLAGKYGQAVADGVRIQY 852
            R PI+AGNWKMNP  L  A  LAA VA     +E   EV + PSHPFLVPV EK++GS+V LGAQN Y E++GAFTG+VST M+KS+G EYVL GHSERR +F DDD  +NRK++KVL AGMKPILCIGE ++E+E GL + VCA+QL KDL GV+AEEM RVVIAYEPVWAIGTGLTATPEIAQ VHA+IR W+AGKYG+AVAD VRIQY
Sbjct:   87 RQPIMAGNWKMNPCTLEEAAALAAGVA--ANPIENDAEVVLFPSHPFLVPVMEKIDGSQVKLGAQNCYTEDKGAFTGSVSTCMVKSIGVEYVLAGHSERRTLFRDDDGAINRKVKKVLSAGMKPILCIGELKDEFEEGLVEQVCALQLAKDLRGVTAEEMRRVVIAYEPVWAIGTGLTATPEIAQKVHAFIRGWIAGKYGKAVADEVRIQY 295
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BLAST of mRNA_S-ischiensis_contig108.1923.1 vs. uniprot
Match: A0A7S2XYZ2_9STRA (Triosephosphate isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYZ2_9STRA)

HSP 1 Score: 289 bits (739), Expect = 2.540e-94
Identity = 140/212 (66.04%), Postives = 166/212 (78.30%), Query Frame = 1 
Query:  217 AERTPIIAGNWKMNPLELSSAQDLAAKVAELTKGVEGVEVCVIPSHPFLVPVKEKLEGSKVTLGAQNLYIEERGAFTGAVSTSMLKSVGCEYVLCGHSERRVIFHDDDFVVNRKMRKVLDAGMKPILCIGESREEYEAGLDQDVCAVQLGKDLAGVSAEEMERVVIAYEPVWAIGTGLTATPEIAQGVHAYIRSWLAGKYGQAVADGVRIQY 852
            A+R P I GNWKMNP  L  A+ LA  V     G    EV +   HPFL PV + L+GS V  G + ++ E++GA+TGAVS SMLK+VGCEYVL GHSERRV+F  DD  ++RK+RK+LD+GMKP+LCIGESREEYEA L++++C +QL KDLAGVSAEEM+ V IAYEPVWAIGTGLTATPEIAQ VHAYIRSW+AGKYGQ VAD VRIQY
Sbjct:   41 ADRVPFICGNWKMNPTTLEEAKALAEGVKSGCDG-SAAEVAIFTPHPFLYPVGKILDGSTVKYGGETVFFEDKGAYTGAVSASMLKTVGCEYVLAGHSERRVLFKTDDSAISRKVRKILDSGMKPVLCIGESREEYEANLNKEICCIQLAKDLAGVSAEEMKLVTIAYEPVWAIGTGLTATPEIAQNVHAYIRSWVAGKYGQEVADEVRIQY 251
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BLAST of mRNA_S-ischiensis_contig108.1923.1 vs. uniprot
Match: A0A835YXR2_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR2_9STRA)

HSP 1 Score: 276 bits (705), Expect = 3.260e-89
Identity = 135/210 (64.29%), Postives = 163/210 (77.62%), Query Frame = 1 
Query:  223 RTPIIAGNWKMNPLELSSAQDLAAKVAELTKGVEGVEVCVIPSHPFLVPVKEKLEGSKVTLGAQNLYIEERGAFTGAVSTSMLKSVGCEYVLCGHSERRVIFHDDDFVVNRKMRKVLDAGMKPILCIGESREEYEAGLDQDVCAVQLGKDLAGVSAEEMERVVIAYEPVWAIGTGLTATPEIAQGVHAYIRSWLAGKYGQAVADGVRIQY 852
            R P+IAGNWK NP  +  A+ LA++VAE TK    V V VIP +PFLVPV+    G+ + +G QN Y EE+GA+TGAVST+ML SVGC YVLCGHSERR +F +DD  +NRK+R VLD  M PILCIGES+EEY+AGL++ VCA+QL KDL GV+ EEM+R+V+AYEPVWAIGTGLTATPEIAQ VH YIR +LA  Y + VAD V IQY
Sbjct:   39 RKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQNAASGA-LMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQY 247
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BLAST of mRNA_S-ischiensis_contig108.1923.1 vs. uniprot
Match: A0A7S2UU88_9STRA (Triosephosphate isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU88_9STRA)

HSP 1 Score: 265 bits (678), Expect = 9.440e-86
Identity = 131/204 (64.22%), Postives = 158/204 (77.45%), Query Frame = 1 
Query:  241 GNWKMNPLELSSAQDLAAKVAELTKGVEGVEVCVIPSHPFLVPVKEKLEGSKVTLGAQNLYIEERGAFTGAVSTSMLKSVGCEYVLCGHSERRVIFHDDDFVVNRKMRKVLDAGMKPILCIGESREEYEAGLDQDVCAVQLGKDLAGVSAEEMERVVIAYEPVWAIGTGLTATPEIAQGVHAYIRSWLAGKYGQAVADGVRIQY 852
            GNWKMNP  L  A  LA  V E  K     EV VIP  PFLVPV + ++GS V LG QN + E++GA+TGAVST MLKSVG +YVL GHSERR +F DDD  +NRK+RK+L+AG+KPILCIGE++EEY+ GL + VC +Q+ KDLA V+AE+M+ +VIAYEPVWAIGTGLTATPEIAQ VH YIRS +A K+G  VA+GVRIQY
Sbjct:    1 GNWKMNPETLDEAVALAKGVVEQVKDGASGEVIVIPPSPFLVPVADIIKGSGVQLGGQNAFFEDKGAYTGAVSTCMLKSVGAKYVLAGHSERRTLFRDDDSSINRKVRKILEAGLKPILCIGETKEEYDQGLVELVCGLQISKDLADVTAEQMKDIVIAYEPVWAIGTGLTATPEIAQSVHKYIRSCIAKKFGDEVAEGVRIQY 204
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BLAST of mRNA_S-ischiensis_contig108.1923.1 vs. uniprot
Match: A0A6S9FXW6_HETAK (Triosephosphate isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FXW6_HETAK)

HSP 1 Score: 266 bits (681), Expect = 1.940e-85
Identity = 129/210 (61.43%), Postives = 165/210 (78.57%), Query Frame = 1 
Query:  223 RTPIIAGNWKMNPLELSSAQDLAAKVAELTKGVEGVEVCVIPSHPFLVPVKEKLEGSKVTLGAQNLYIEERGAFTGAVSTSMLKSVGCEYVLCGHSERRVIFHDDDFVVNRKMRKVLDAGMKPILCIGESREEYEAGLDQDVCAVQLGKDLAGVSAEEMERVVIAYEPVWAIGTGLTATPEIAQGVHAYIRSWLAGKYGQAVADGVRIQY 852
            R P IAGNWKMNP  L  A+ LAAKVAELTK    VE+ V   HPF+ PV ++LEGS V +GA+ ++ E++GA+TGAVS +M+KS+G ++VL GHSERRV+F+ DD  VNR++ K+L+ GM  ILCIGES+ EY+AGL+Q++C VQL KDL  V+ E+M+ VVIAYEPVWAIGTGLTATPEIAQ VHA IR+W+A K+G+ +A   RIQY
Sbjct:   45 RRPFIAGNWKMNPTSLEEAKTLAAKVAELTKENTEVEMAVFAPHPFIYPVAKELEGSNVVVGAETIFTEDKGAYTGAVSATMVKSMGGKWVLAGHSERRVLFNTDDDSVNRQVLKILNRGMGCILCIGESQAEYDAGLNQEICTVQLAKDLKDVTPEQMKNVVIAYEPVWAIGTGLTATPEIAQNVHASIRAWVAKKFGEQIAKETRIQY 254
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BLAST of mRNA_S-ischiensis_contig108.1923.1 vs. uniprot
Match: A0A4D9CPZ8_9STRA (Triosephosphate isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPZ8_9STRA)

HSP 1 Score: 262 bits (669), Expect = 1.390e-83
Identity = 142/258 (55.04%), Postives = 176/258 (68.22%), Query Frame = 1 
Query:   85 LCTLALAATAGGAQAFVPAGAFTGAGGRVAR--DRAHRDTASVFMAAERTPIIAGNWKMNPLELSSAQDLAAKVAELTKGVEGVEVCVIPSHPFLVPVKEKLEGSKVTLGAQNLYIEERGAFTGAVSTSMLKSVGCEYVLCGHSERRVIFHDDDFVVNRKMRKVLDAGMKPILCIGESREEYEAGLDQDVCAVQLGKDLAGVSAEEMERVVIAYEPVWAIGTGLTATPEIAQGVHAYIRSWLAGKYGQAVADGVRIQY 852
            LC   +A  A  A AF+P  AF  +     R   RA      V M + R P IAGNWK NP  L +A DLA  V+  +     V+V V+   PFLVPVKE L+GS V +GAQ+LY E++GA+TGA S  M+KSVG ++VLCGHSERR +F D D  VN K++KVL AG+K ILCIGE+++EYE G+++ +C +QL K L GV+ E+ME V IAYEPVWAIGTGLTATPEIAQ VH+ IR+ L   YGQAVAD V IQY
Sbjct:    5 LCLWTVAMLAASATAFIPHTAFRPSSPVATRRCSRAVSRGTGVSMMSGRRPFIAGNWKENPDTLEAAIDLAKVVSTASSSASNVDVAVVVPFPFLVPVKETLKGSNVLIGAQDLYTEDKGAYTGATSLPMIKSVGAQWVLCGHSERRALFGDTDETVNAKLKKVLAAGLKAILCIGETKDEYELGVNKLICGLQLAKGLKGVTKEQMENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQY 262
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BLAST of mRNA_S-ischiensis_contig108.1923.1 vs. uniprot
Match: A0A7S0QWG0_9CRYP (Triosephosphate isomerase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QWG0_9CRYP)

HSP 1 Score: 259 bits (661), Expect = 2.560e-82
Identity = 129/213 (60.56%), Postives = 162/213 (76.06%), Query Frame = 1 
Query:  223 RTPIIAGNWKMNPLELSSAQDLAAKVAELTKGV-EGVEVCVIPSHPFLVPVKEKLEGSKVTLGAQNLYIEERGAFTGAVSTSMLKSVGCEYVLCGHSERRV--IFHDDDFVVNRKMRKVLDAGMKPILCIGESREEYEAGLDQDVCAVQLGKDLAGVSAEEMERVVIAYEPVWAIGTGLTATPEIAQGVHAYIRSWLAGKYGQAVADGVRIQY 852
            R   IAGNWK+NP  L  A+ LA+ V +    + + +++CV   HPFL PV E ++G+KV+LGA++L+ E++GAFTG VS  MLKSVG +YVL GHSERR   I  + D V+N+K RKVLDAG+ PILC+GE++EEY+  L++ +CA+QL K LAGV+ EEM RV IAYEPVWAIGTGLTATPEIAQ VHAYIRSWLA  Y +A AD VRIQY
Sbjct:   54 RNSFIAGNWKLNPTTLDEAKALASAVVKSASSITKDMDICVCCPHPFLAPVAEIVKGTKVSLGAEDLFTEDKGAFTGGVSVGMLKSVGVKYVLVGHSERRQGNIATESDAVINKKTRKVLDAGLSPILCVGETKEEYQLNLNKAICALQLSKGLAGVTKEEMARVTIAYEPVWAIGTGLTATPEIAQEVHAYIRSWLAQMYDKATADTVRIQY 266
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BLAST of mRNA_S-ischiensis_contig108.1923.1 vs. uniprot
Match: A0A7S4ETX6_CHRCT (Triosephosphate isomerase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETX6_CHRCT)

HSP 1 Score: 251 bits (641), Expect = 2.610e-79
Identity = 130/223 (58.30%), Postives = 160/223 (71.75%), Query Frame = 1 
Query:  184 AHRDTASVFMAAERTPIIAGNWKMNPLELSSAQDLAAKVAELTKGVEGVEVCVIPSHPFLVPVKEKLEGSKVTLGAQNLYIEERGAFTGAVSTSMLKSVGCEYVLCGHSERRVIFHDDDFVVNRKMRKVLDAGMKPILCIGESREEYEAGLDQDVCAVQLGKDLAGVSAEEMERVVIAYEPVWAIGTGLTATPEIAQGVHAYIRSWLAGKYGQAVADGVRIQY 852
            A   TA+V M A+RTP++AGNWKMN + L  A  LA  VA  ++  +GV+V V   +PF+VPVKE L GSKV LGAQ+ Y EE GA+T AVSTSMLKSVGC+YVL GHSERR IF D D  +N+K+ K+L  G+K ILCIGE +EE E+G    VC  QL K LAGVS  +++ +VIAYEPVWAIGTGLTATPE+AQ  H Y+R W +  Y  A A+ + IQY
Sbjct:   42 ARSHTAAVNMMADRTPLMAGNWKMNTV-LDEAVALAKAVAAASEKADGVDVAVCVPYPFIVPVKEALAGSKVGLGAQDCYYEESGAYTAAVSTSMLKSVGCDYVLAGHSERRAIFGDTDEDINKKVLKILAEGLKCILCIGELKEERESGETFSVCDTQLTKGLAGVSEAQLKDIVIAYEPVWAIGTGLTATPELAQETHEYVRKWFSENYSPAAAEAMIIQY 263
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BLAST of mRNA_S-ischiensis_contig108.1923.1 vs. uniprot
Match: A0A7S0EYC4_9CRYP (Triosephosphate isomerase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EYC4_9CRYP)

HSP 1 Score: 243 bits (621), Expect = 7.990e-77
Identity = 125/224 (55.80%), Postives = 155/224 (69.20%), Query Frame = 1 
Query:  181 RAHRDTASVFMAAERTPIIAGNWKMNPLELSSAQDLAAKVAELTKGVEGVEVCVIPSHPFLVPVKEKLEGSKVTLGAQNLYIEERGAFTGAVSTSMLKSVGCEYVLCGHSERRVIFHDDDFVVNRKMRKVLDAGMKPILCIGESREEYEAGLDQDVCAVQLGKDLAGVSAEEMERVVIAYEPVWAIGTGLTATPEIAQGVHAYIRSWLAGKYGQAVADGVRIQY 852
            RA R          R P IAGNWKMNP  +  A  LAA V E +KG +  +V +   H +L  V E   GS+V LGAQ++Y E++GAFTGAVS SM+KS+GC++VLCGHSERR IF + D  VNRK++KVL  G+ P+LCIGES+ EY   L++ +CA QL K LAGV+ E+M+RV IAYEPVWAIGTGLT  PE AQ VHA++RSWLA  Y +  A  VRI Y
Sbjct:   30 RARRAPRQDICMVSRRPFIAGNWKMNPETMEEAAKLAAGVVEGSKGSKA-QVAIFVPHAYLYQVGEATRGSEVELGAQSIYYEDKGAFTGAVSVSMVKSMGCKHVLCGHSERRTIFKNSDEEVNRKVKKVLAEGLDPLLCIGESKTEYLGKLNKAICATQLSKGLAGVAKEDMKRVTIAYEPVWAIGTGLTCDPETAQEVHAFVRSWLAELYDEDTARRVRILY 252
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig108.1923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZJI0_9STRA3.050e-10671.90Triosephosphate isomerase n=1 Tax=Tribonema minus ... [more]
A0A7S4D8V7_HETAK3.340e-9669.67Triosephosphate isomerase n=3 Tax=Heterosigma akas... [more]
A0A7S2XYZ2_9STRA2.540e-9466.04Triosephosphate isomerase n=1 Tax=Fibrocapsa japon... [more]
A0A835YXR2_9STRA3.260e-8964.29Triosephosphate isomerase n=1 Tax=Tribonema minus ... [more]
A0A7S2UU88_9STRA9.440e-8664.22Triosephosphate isomerase n=1 Tax=Fibrocapsa japon... [more]
A0A6S9FXW6_HETAK1.940e-8561.43Triosephosphate isomerase n=1 Tax=Heterosigma akas... [more]
A0A4D9CPZ8_9STRA1.390e-8355.04Triosephosphate isomerase n=1 Tax=Nannochloropsis ... [more]
A0A7S0QWG0_9CRYP2.560e-8260.56Triosephosphate isomerase n=1 Tax=Cryptomonas curv... [more]
A0A7S4ETX6_CHRCT2.610e-7958.30Triosephosphate isomerase n=1 Tax=Chrysotila carte... [more]
A0A7S0EYC4_9CRYP7.990e-7755.80Triosephosphate isomerase (Fragment) n=1 Tax=Hanus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig108contigS-ischiensis_contig108:146519..150772 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score244.2
Seed ortholog evalue6.8e-62
Seed eggNOG ortholog2903.EOD07548
Preferred nameTPI3
KEGG rclassRC00423
KEGG koko:K01803
KEGG ReactionR01015
KEGG Pathwayko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00001,M00002,M00003
GOsGO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616
EggNOG free text desc.triosephosphate isomerase
EggNOG OGsCOG0149@1,KOG1643@2759
EC5.3.1.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionTriose-phosphate isomerase
Ec32 orthologEc-03_002790.1
Exons5
Model size854
Cds size786
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig108.1923.1prot_S-ischiensis_contig108.1923.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig108 146585..150772 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815573.186083-UTR-S-ischiensis_contig108:146518..1465841622815573.186083-UTR-S-ischiensis_contig108:146518..146584Schizocladia ischiensis KU_0333UTRS-ischiensis_contig108 146519..146584 +
1695739778.5691636-UTR-S-ischiensis_contig108:146518..1465841695739778.5691636-UTR-S-ischiensis_contig108:146518..146584Schizocladia ischiensis KU_0333UTRS-ischiensis_contig108 146519..146584 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815573.1996124-CDS-S-ischiensis_contig108:146584..1468151622815573.1996124-CDS-S-ischiensis_contig108:146584..146815Schizocladia ischiensis KU_0333CDSS-ischiensis_contig108 146585..146815 +
1695739778.5832503-CDS-S-ischiensis_contig108:146584..1468151695739778.5832503-CDS-S-ischiensis_contig108:146584..146815Schizocladia ischiensis KU_0333CDSS-ischiensis_contig108 146585..146815 +
1622815573.2168646-CDS-S-ischiensis_contig108:147072..1471561622815573.2168646-CDS-S-ischiensis_contig108:147072..147156Schizocladia ischiensis KU_0333CDSS-ischiensis_contig108 147073..147156 +
1695739778.5914643-CDS-S-ischiensis_contig108:147072..1471561695739778.5914643-CDS-S-ischiensis_contig108:147072..147156Schizocladia ischiensis KU_0333CDSS-ischiensis_contig108 147073..147156 +
1622815573.2316802-CDS-S-ischiensis_contig108:148951..1491281622815573.2316802-CDS-S-ischiensis_contig108:148951..149128Schizocladia ischiensis KU_0333CDSS-ischiensis_contig108 148952..149128 +
1695739778.600874-CDS-S-ischiensis_contig108:148951..1491281695739778.600874-CDS-S-ischiensis_contig108:148951..149128Schizocladia ischiensis KU_0333CDSS-ischiensis_contig108 148952..149128 +
1622815573.2439125-CDS-S-ischiensis_contig108:149992..1500791622815573.2439125-CDS-S-ischiensis_contig108:149992..150079Schizocladia ischiensis KU_0333CDSS-ischiensis_contig108 149993..150079 +
1695739778.608732-CDS-S-ischiensis_contig108:149992..1500791695739778.608732-CDS-S-ischiensis_contig108:149992..150079Schizocladia ischiensis KU_0333CDSS-ischiensis_contig108 149993..150079 +
1622815573.2557013-CDS-S-ischiensis_contig108:150565..1507721622815573.2557013-CDS-S-ischiensis_contig108:150565..150772Schizocladia ischiensis KU_0333CDSS-ischiensis_contig108 150566..150772 +
1695739778.61741-CDS-S-ischiensis_contig108:150565..1507721695739778.61741-CDS-S-ischiensis_contig108:150565..150772Schizocladia ischiensis KU_0333CDSS-ischiensis_contig108 150566..150772 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig108.1923.1

>prot_S-ischiensis_contig108.1923.1 ID=prot_S-ischiensis_contig108.1923.1|Name=mRNA_S-ischiensis_contig108.1923.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=262bp
MRSSSALCTLALAATAGGAQAFVPAGAFTGAGGRVARDRAHRDTASVFMA
AERTPIIAGNWKMNPLELSSAQDLAAKVAELTKGVEGVEVCVIPSHPFLV
PVKEKLEGSKVTLGAQNLYIEERGAFTGAVSTSMLKSVGCEYVLCGHSER
RVIFHDDDFVVNRKMRKVLDAGMKPILCIGESREEYEAGLDQDVCAVQLG
KDLAGVSAEEMERVVIAYEPVWAIGTGLTATPEIAQGVHAYIRSWLAGKY
GQAVADGVRIQY
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mRNA from alignment at S-ischiensis_contig108:146519..150772+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig108.1923.1 ID=mRNA_S-ischiensis_contig108.1923.1|Name=mRNA_S-ischiensis_contig108.1923.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4254bp|location=Sequence derived from alignment at S-ischiensis_contig108:146519..150772+ (Schizocladia ischiensis KU_0333)
CACATCACGTGAATCATACACCCCCACCCTCCACAAGCCCAAAGCAGTGC
TCCTCGCGGTGCAGCGATGAGGTCGTCTTCTGCGCTTTGTACCCTTGCCC
TGGCGGCGACGGCAGGGGGCGCGCAAGCCTTCGTGCCGGCGGGGGCCTTC
ACGGGCGCCGGGGGCCGAGTGGCGCGGGACCGCGCACATCGCGACACGGC
TTCAGTCTTTATGGCTGCCGAGCGAACACCAATTATCGCGGGGAACTGGA
AGATGAACCCATTGGAGCTGTCATCTGCGCAGGACCTCGCTGCTAAGGTG
GGGGGGCGCACAGTGGGAACATGACAGGTTGCCCACAAACGCGTAACCTA
TGCTACAGTAGGTGGTCGATAAACAACTCTCTTTGTACAGCAAAGGCGTA
CTGCCTTCACCAACTCATGTGTGATCAGTTTTTTCGCGCATCAGGTTGCC
CGTCCCCCGGCCGCTCACTGACCCCACCGCGCTGCCCGGTCACACACACT
CCGTTGCTTTGCGATGTTGGATTCCGGACTTGTCCGGGCTGGCCTGCTTC
CCAGGTGGCGGAGTTGACCAAGGGGGTTGAAGGTGTGGAGGTCTGCGTGA
TTCCTTCGCACCCATTCCTCGTCCCCGTAAAGGAGAAGGTGAGGGAGAGC
GGAGAAGCAAGCTCCCGCCGATTGGGTACATATGCACTTGCCGTGCGAGT
AGTATTGGACTCATGTTCATGTTTATCATGTTTGGCGTATGAGCCGGCGA
GTCCCACGTTCTTAGCTTCCGTTGTGGCCTGGCTTGCCGGGGATCTTGTG
AGCATGCTCCGATCTCTGAAGAGGTCTCGGTAATTGGTATCTGAGCTCCA
GCAAGTTCTGAAGGCGAGCACTTCCTTCCAAGTTCCTATGTTGGGGCGCG
GGCTACGCTTGAACTCCGTACTTCGAAGTAGTGCAGCACCAACTGCTGGT
GCTAGTGCTCGAGTGGGCATGCTTTGAAGTAGCAATAGTAGTATTAGTGG
TAGTGCATAGTACCCTGGCGAGCTATAAGGAAGGCCAACTGTTGAGGTCT
TTAGTGACGTGGCTCGCACCTTGCCCTGTGTTGTTCCTGTTAATACTAGA
GTACTACTACTAGTGCTACTGCTACTACTACTACTACTACTACTGCTACT
ACTACTACTACTACTACCACTACTACTACTACTACTACTACTGCTACTAC
TACTGCTACTACTACTACTACTACTACTACTACTACTACTACTACTACTT
ACTCTGCTACTACTACCACTACTACAACTACTACTACTACTGCTAGAGTT
CTCCCCCCCCTCCCCTTCCCCACACAATCCGTCCTGGCGAGCTAAGGACG
GGCCACTGTTGAGGTCTTTGGTGACGTGGGCTGCACCTCACCCTGTGATT
TTCCTGTTAGTGCAAGTAGTACTAGTTCTCGTAGCAGTACAATAGTCGCT
GTACTCATTGGCTTGTCTTGCGACGTATCCTTGCCCTCCGACAGGAGTAG
CTATTTAGCCATGGACTCTCACATCCCAATTAGGCCGGGATGGAGCATGC
CGCGTTTGCACCGGCCAGGCCGTGCACTGGCCAAGCCCGGAATGCCACTA
TGCCTTGGCGTCGGCAAGCCGGATGAGGGGCCGCTTGCTAGACTACAACA
AAGCGTAGCCGTCGGCGAGAGCTTGTGCGTCTCTTCACCGAGTTGCTCTT
GGGCGCACCGGCACCCTAACAGTCACGGGAGGAACAATCAGGGTGATTGG
TCCCGACCGCTAGGTCGCCGGACAATGCTCCTAGCAGTAGTGTAAGGGGC
GGTGTATAAGGAGACCTGCTTGAAAATGATCCCCGTTCGGTACGATAGTT
TGAGGGCCCAAAAAAATTGCAGGGGGGACTTTGACTAAGGAGCCCCCTTG
GACCTGTAGGGTCCAAGTGGCCGTACTGACCCTCGGCTTCAACAAGGCCG
CTGTCATGCCAGCACCCTTGATGTGAGGCCAGGTATCCTAGTGTTTCGAA
GTAACCTATTGGGCGGTTTGGGCTGAGTCGCTGCCGATTGCAAAAAAGAG
TCTCACATTTCTAGCCGGTTTGCCGCGCGACCCTGCAGACAGAGGGAGCA
AAAAACAAGGCAAGGGGCTGTTTGGGCTCGCTGCCGATTGCCAAAAGAGT
CTCACATTTCCAGCCGGTTCTCCGGCGCGACCGTGCAGATAGAACACTCA
ATTCTTTAAAAAAAAAAGGGACAACCCCTAGTACGAGAACACTCAATCTC
TCACACGCGTGCGATTGTACCTCGTTGCAATTTATACAAATCGCCACTAA
TGCGAGCACACTCGATCTCACACACGTGCGATTGTACCTAGTTGCATTTT
TCATATGAATCGCCAACACTCAATCTCACACACTTGCGATTGTACCTCAT
TACATTTTGAACTCATGAATCACCTACATACAGTTGGAGGGGTCGAAGGT
GACGTTGGGTGCGCAGAACCTGTACATCGAGGAGCGGGGCGCCTTCACGG
GCGCGGTGTCCACCTCCATGCTCAAGTCCGTGGGCTGCGAGTACGTGCTG
TGCGGGCACTCGGAGCGGAGGGTCATCTTCCACGACGACGACTTTGTTGT
CAACCGCAAGGTGTGTGTGTGTGTGTGTGTGTGTGTATGATGTGATGTGA
TGTGATGTGCACTCAAAAGCGCTGTAGTTTGACATCACATCACATCACAA
AAAAACATCGGTGTGTGTGTGTGCGTACGTGTGTGTGCGTGTGTGTGTGT
GTGTGTGTGCGTGCGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTATGTTC
ATTGTGTGTGTGTGTGCTTGTGTGTGCGTGTGCAGTTTGACACAACAATA
ACATCACATCATGTCACAGTTTGTGCTGTGCTTTCGATACCCTCCGCTCT
GCCGAGCCAAGCGAGGTGCCCTGGGCGATTGGGTTGCGATGTGATGTGCA
CTCTATCTGACACACTGTACCACCATAGTTGGACATCACATCAACGCCTC
CTGAGTGATTGTGATGCGATGTGATGTGATATGATGCGATGTGATGTGCA
CTCTATCTGACACACTGTACCACTGTAGTTGGACATCACATCAACACCTC
CTGAGTGATTGTGATGCGATGTGATGTGATATGATGCGGTGTGATGTGCA
CTCTATCTGACACACTGTACCACTGTAGTTGGATGGACATCACATCAACA
GCTCCTGAGTGATGGTGATGCGATGTGGTGTGCACTCGAACACACGTACT
TCGAAGTACTACTTTAGAGTAGTTGGACATCACATCAATGAGTGATTGTG
ACGCGATGTGATGTGCACTCTTAACACACTGTACTACAGTAGGTAGATGG
ACACCACATCGACACCTCCTGAGTGATCGTGATGCGATGTAATGTGCACT
CTAGCACTCTGTAGTGCAGTAGTTTGACATCACATCAACACCTCCTGAGT
GATTGTGATGCAATGTGATGACAGATGCGCAAGGTGCTGGACGCAGGCAT
GAAGCCTATCCTGTGCATCGGGGAGAGCAGGGAGGAGTACGAGGCAGGTC
TCGACCAGGATGTGAGTGGGCGTCGTGGTCGCTCGAGATTCGTATACATT
GTAGCTCCGTCTCGAACGAGGCGTGGGGTCAATGGTCTCGGGACTAAGGC
AAGCACCACGTGAGTACATACATATATATATATGTGTGTATATTGTAGCG
AGGTACAGTTGCACGTGTGTGAGATTGAGTGTTCTCGTATTCCTGTAGTG
GTTGTGGCCATCCTGTGCACACGGGAGAGCAGGAAGGAGTACGAGGCGGG
TCTCGACCAGGATGTGAGTGGGCGCTGATTCATATAAACTGCAATGAGGT
AGAGTCGCATGTGTGTGAGATTGAGTGTTCTCGCGGTCGCTCGAGATCTG
CCGGCTTGGAAAACGCAGTAGAATCGAGGGCAGCAGCAGGTGCAGTATGG
GGTAGGGACCGTACAAATGTGGGAGCACGTGGCCTGCTGAGTTAGCGTAG
AGTGTCAACCCTGCACCCACCTACCCACCCCCCTCTCCTCCAATCAGGTG
TGTGCGGTCCAGCTGGGCAAGGACCTGGCAGGCGTTAGCGCGGAGGAGAT
GGAGCGGGTGGTGATTGCCTACGAGCCAGTGTGGGCCATTGGCACGGGGC
TCACGGCCACGCCCGAGATTGCGCAGGGCGTGCACGCCTACATCCGCTCC
TGGCTGGCCGGGAAGTATGGGCAGGCGGTGGCAGACGGCGTCAGGATACA
GTAC
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Coding sequence (CDS) from alignment at S-ischiensis_contig108:146519..150772+

>mRNA_S-ischiensis_contig108.1923.1 ID=mRNA_S-ischiensis_contig108.1923.1|Name=mRNA_S-ischiensis_contig108.1923.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1572bp|location=Sequence derived from alignment at S-ischiensis_contig108:146519..150772+ (Schizocladia ischiensis KU_0333)
ATGAGGTCGTCTTCTGCGCTTTGTACCCTTGCCCTGGCGGCGACGGCAGG
GGGCGCGCAAGCCTTCGTGCCGGCGGGGGCCTTCACGGGCGCCGGGGGCC
GAGTGGCGCGGGACCGCGCACATCGCGACACGGCTTCAGTCTTTATGGCT
GCCGAGCGAACACCAATTATCGCGGGGAACTGGAAGATGAACCCATTGGA
GCTGTCATCTGCGCAGGACCTCGCTGCTAAGATGAGGTCGTCTTCTGCGC
TTTGTACCCTTGCCCTGGCGGCGACGGCAGGGGGCGCGCAAGCCTTCGTG
CCGGCGGGGGCCTTCACGGGCGCCGGGGGCCGAGTGGCGCGGGACCGCGC
ACATCGCGACACGGCTTCAGTCTTTATGGCTGCCGAGCGAACACCAATTA
TCGCGGGGAACTGGAAGATGAACCCATTGGAGCTGTCATCTGCGCAGGAC
CTCGCTGCTAAGGTGGCGGAGTTGACCAAGGGGGTTGAAGGTGTGGAGGT
CTGCGTGATTCCTTCGCACCCATTCCTCGTCCCCGTAAAGGAGAAGGTGG
CGGAGTTGACCAAGGGGGTTGAAGGTGTGGAGGTCTGCGTGATTCCTTCG
CACCCATTCCTCGTCCCCGTAAAGGAGAAGTTGGAGGGGTCGAAGGTGAC
GTTGGGTGCGCAGAACCTGTACATCGAGGAGCGGGGCGCCTTCACGGGCG
CGGTGTCCACCTCCATGCTCAAGTCCGTGGGCTGCGAGTACGTGCTGTGC
GGGCACTCGGAGCGGAGGGTCATCTTCCACGACGACGACTTTGTTGTCAA
CCGCAAGTTGGAGGGGTCGAAGGTGACGTTGGGTGCGCAGAACCTGTACA
TCGAGGAGCGGGGCGCCTTCACGGGCGCGGTGTCCACCTCCATGCTCAAG
TCCGTGGGCTGCGAGTACGTGCTGTGCGGGCACTCGGAGCGGAGGGTCAT
CTTCCACGACGACGACTTTGTTGTCAACCGCAAGATGCGCAAGGTGCTGG
ACGCAGGCATGAAGCCTATCCTGTGCATCGGGGAGAGCAGGGAGGAGTAC
GAGGCAGGTCTCGACCAGGATATGCGCAAGGTGCTGGACGCAGGCATGAA
GCCTATCCTGTGCATCGGGGAGAGCAGGGAGGAGTACGAGGCAGGTCTCG
ACCAGGATGTGTGTGCGGTCCAGCTGGGCAAGGACCTGGCAGGCGTTAGC
GCGGAGGAGATGGAGCGGGTGGTGATTGCCTACGAGCCAGTGTGGGCCAT
TGGCACGGGGCTCACGGCCACGCCCGAGATTGCGCAGGGCGTGCACGCCT
ACATCCGCTCCTGGCTGGCCGGGAAGTATGGGCAGGCGGTGGCAGACGGC
GTCAGGATACAGTACGTGTGTGCGGTCCAGCTGGGCAAGGACCTGGCAGG
CGTTAGCGCGGAGGAGATGGAGCGGGTGGTGATTGCCTACGAGCCAGTGT
GGGCCATTGGCACGGGGCTCACGGCCACGCCCGAGATTGCGCAGGGCGTG
CACGCCTACATCCGCTCCTGGCTGGCCGGGAAGTATGGGCAGGCGGTGGC
AGACGGCGTCAGGATACAGTAC
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