mRNA_S-ischiensis_contig106.1871.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig106.1871.1
Unique NamemRNA_S-ischiensis_contig106.1871.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig106.1871.1 vs. uniprot
Match: D7FS66_ECTSI (Putative cyclin A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS66_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 5.060e-113
Identity = 176/285 (61.75%), Postives = 214/285 (75.09%), Query Frame = 1
Query:   22 QLPPGVCEIDAEVGAGEAGALWNPDYTHEYQAWLRSQQGKNRPRAYIPGRQRDMKHNMRSILVDWIVEVCEEFKMATPTLFLIVELVDRALSKFEVARSRLQLLGCACILLASKHEEIYPPTVDDLVHISDNTYKRGDIIEMELRVMRELDFRLHCITPCFFLERFCRAAKSNRRERSLARYLLELLLQDYHMLEYPPSLKAAAAVNLACQTL--RSSAQTAWTAQARYYTGYAAQELEECVRRLHALHLGAEAHSLRAVRDKYTRSGNHRVSEVTCLLADWLCF 870
            QLPPGV +IDA V       L NPDY  E+  +LR Q+ +NRP AYI  +Q+DM+ +MRS+LVDWI EVC++FK+++ TLF  V+L+DR+LS FEV R +LQLLGCAC++LASK+EEIY PT ++L HISDNTY R +II MEL V+  L FRL CITPC F +RFC AAKSN RERSL  YLLELLLQDY  +   PSLKAAAA+ LA QTL  R   + AWT Q  +YTGYAA+ELE CVRRLH LH+ AE ++L AVRDKY +S  HRV+EVTC L D+L F
Sbjct:   49 QLPPGVKDIDAGVSEEGESHLLNPDYAKEHALYLREQEKRNRPVAYIGAKQKDMRPSMRSVLVDWICEVCDQFKLSSRTLFQAVDLIDRSLSAFEVPRGKLQLLGCACVVLASKYEEIYAPTAEELAHISDNTYTRAEIIAMELVVVNALQFRLTCITPCNFQDRFCLAAKSNARERSLVSYLLELLLQDYQGVSLLPSLKAAAALYLARQTLHPRGCPREAWTRQTEHYTGYAARELEPCVRRLHYLHVRAEGNNLHAVRDKYKKSALHRVAEVTCALEDYLHF 333          
BLAST of mRNA_S-ischiensis_contig106.1871.1 vs. uniprot
Match: A0A6H5L2E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E4_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 1.330e-108
Identity = 176/287 (61.32%), Postives = 214/287 (74.56%), Query Frame = 1
Query:   22 QLPPGVCEIDAEVGAGEAGALWNPDYTHEYQAWLRSQQGKNRPRAYIPGRQRDMKHNMRSILVDWIVEVCEEFKMATPTLFLIVELVDRALSKFEVARSRLQLLGCACILLASKHEEIYPPTVDDLVHISDNTYKRGDIIEMELRVMRELDFRLHCITPCFFLERFCRAAKSNRRERSLARYLLELLLQDYHMLEYPPSLKAAAAVNLACQTL--RSSAQTAWTAQARYYTGYAAQELEECVRRLHALHLGAEAHSLRAVRDKYTRSGNHRVSEVTCLLADWLCFDG 876
            QLPPGV +IDA V       L NPDY  ++  +LR Q+ +NRP AYI  +QRDM+ +MRS+LVDWI EVC++FK+++ TLF  V+L+DR+LS FEV R +LQLLGCAC++LASK+EEIY PT ++L HISDNTY R +II MEL V+  L FRL  ITPC F +RFC AAKSN RERSL  YLLELLLQDY  +   PSLKAAAA+ LA QTL  R   + AWT Q  +YTGYAA+ELE CVRRLH LH+ AE ++L AVRDKY +S  HRV+EVTC L D+L F G
Sbjct:  289 QLPPGVKDIDAGVSEQGESHLLNPDYAKQHALYLREQEKRNRPVAYIGTKQRDMRPSMRSVLVDWICEVCDQFKLSSRTLFQAVDLIDRSLSAFEVPRGKLQLLGCACVVLASKYEEIYAPTAEELAHISDNTYTRAEIIAMELVVVNALQFRLTSITPCNFQDRFCLAAKSNARERSLVSYLLELLLQDYQGVSLLPSLKAAAALYLARQTLHPRGCPREAWTRQTEHYTGYAARELEPCVRRLHYLHVRAEGNNLHAVRDKYKKSALHRVAEVTCALEDYLHFGG 575          
BLAST of mRNA_S-ischiensis_contig106.1871.1 vs. uniprot
Match: A0A835YJW4_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJW4_9STRA)

HSP 1 Score: 234 bits (598), Expect = 4.630e-70
Identity = 129/264 (48.86%), Postives = 172/264 (65.15%), Query Frame = 1
Query:   85 WNPDYTHEYQAWLRSQQG--KNRPRAYIPGRQRDMKHNMRSILVDWIVEVCEEFKMATPTLFLIVELVDRALSKFEVARSRLQLLGCACILLASKHEEIYPPTVDDLVHISDNTYKRGDIIEMELRVMRELDFRLHCITPCFFLERFCRAAKSNRRERSLARYLLELLLQDYHMLEYPPSLKAAAAVNLACQTLRSSAQTAWTAQARYYTGYAAQELEECVRRLHALHLGAEAHSLRAVRDKYTRSGNHRVSEVTCLLADWLCF 870
            +N  Y  +YQ WLR+Q+   K RP AY+   QRD++  MRS L+DW+VEVC EF++   T FL++EL+DR+LS F V R  LQLLGCAC+L+A+K EE +PP+V+ LV+ISD+ Y   D++ ME +V++ L+F + C+TP  F   F  AA  N R+  L  YLLEL L DY ++   PS KAAAA  LA  T+R     AW+A AR +TGY+A  LE CVRR+  LH  AE   L A+RD+Y +   HRV+ V CL    L F
Sbjct:  212 FNRCYGAQYQHWLRTQEANLKFRPTAYLTQVQRDLRAVMRSTLIDWLVEVCTEFRLQPGTPFLVIELLDRSLSAFCVNRDNLQLLGCACLLVAAKFEEEHPPSVNSLVYISDSAYTISDMVRMEGQVLQHLNFAVSCVTPHHFAAEFSAAAGCNARQGYLCLYLLELALLDYSLVSLLPSHKAAAAALLARMTMRRGGG-AWSALARQFTGYSAATLEPCVRRMRVLHESAENSKLHAIRDRYCKQERHRVALVCCLKESELVF 474          
BLAST of mRNA_S-ischiensis_contig106.1871.1 vs. uniprot
Match: A0A7S0ETL5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ETL5_9EUKA)

HSP 1 Score: 196 bits (497), Expect = 3.540e-56
Identity = 111/244 (45.49%), Postives = 158/244 (64.75%), Query Frame = 1
Query:   97 YTHEYQAWLRSQQ-GKNRPRAYIPGRQRDMKHNMRSILVDWIVEVCEEFKMATPTLFLIVELVDRALSKFEVARSRLQLLGCACILLASKHEEIYPPTVDDLVHISDNTYKRGDIIEMELRVMRELDFRLHCITPCFFLERFCRAAKSNRRE---RSLARYLLELLLQDYHMLEYPPSLKAAAAVNLACQTLRSSAQTAWTAQARYYTGYAAQELEECVRRLHALHLGAEAHSLRAVRDKYTRS 816
            Y +E  A+L+  + GK +   +    QRD+   MR+IL+DW+VEV EE+++   TL L V  +DR LS   VARS+LQL+G  C+L+ASK+EEI+PP VD+ V+ISDNTYKR +I+ ME  ++  L+F L   T   FL RF +AAK+   +    +L +YL EL LQ+Y  L+Y PS  AAAA  LA  T+R  +   WT      +G++AQ+L  CV  +HA+   AEA+SL+AVR+KY+ +
Sbjct:  116 YVNEIYAYLQELEVGKQQVSPHFMQNQRDINAQMRAILIDWLVEVAEEYRLVPETLHLAVNYIDRFLSYVPVARSKLQLVGVTCMLIASKYEEIHPPAVDEFVYISDNTYKREEIMSMEAIILNRLNFELSIATSKGFLNRFMKAAKAGECDATTEALCQYLCELTLQEYSFLKYRPSQIAAAAFRLALHTMRLPS---WTPLLEQISGFSAQQLSGCVTEMHAVFRKAEANSLQAVREKYSHA 356          
BLAST of mRNA_S-ischiensis_contig106.1871.1 vs. uniprot
Match: A0A0M0JCK3_9EUKA (Cyclin N-terminal domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JCK3_9EUKA)

HSP 1 Score: 189 bits (479), Expect = 4.100e-54
Identity = 109/252 (43.25%), Postives = 159/252 (63.10%), Query Frame = 1
Query:   97 YTHEYQAWLRSQQGKNRPRAYIPGRQRDMKHNMRSILVDWIVEVCEEFKMATPTLFLIVELVDRALSKFEVARSRLQLLGCACILLASKHEEIYPPTVDDLVHISDNTYKRGDIIEMELRVMRELDFRLHCITPCFFLERFCRAAKSNRRERS---LARYLLELLLQDYHMLEYPPSLKAAAAVNLACQTLRSSAQTAWTAQARYYTGYAAQELEECVRRLHALHLGAEAHSLRAVRDKYTRSGNHRVSEVT 843
            YT E  ++LR  + ++R        QRD+   MR IL+DW+VEV EE+++ + TL+L V  +DR LS   V RS+LQL+G  C+L+ASK+EEI+PP VD+ V+ISDNTYKR +I+ ME  V+  L+F L   T   F+ RF +AA++   + +   L +YL EL LQ+Y  ++Y PS  AAAA+ LA  T+R  A   WT      +GY+A++L  CV  + A    AE ++L+AVR+KY+ +    VS +T
Sbjct:   66 YTKEIYSYLRDLELEHRVAPQFMQSQRDINATMRGILIDWLVEVAEEYRLESETLYLAVNYIDRFLSHVPVNRSKLQLVGVTCMLVASKYEEIHPPAVDEFVYISDNTYKREEILHMEGMVLNRLNFELSVATAKVFINRFLKAARAGECDSTTEMLCKYLTELTLQEYSFVKYRPSEVAAAALRLALHTMRLPA---WTPLLEATSGYSAEDLNGCVAEVLASFRKAETNNLQAVREKYSHAKFLCVSTLT 314          
BLAST of mRNA_S-ischiensis_contig106.1871.1 vs. uniprot
Match: UPI0003F0A1E2 (G2/mitotic-specific cyclin-A-like isoform X2 n=3 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0A1E2)

HSP 1 Score: 190 bits (482), Expect = 3.190e-53
Identity = 111/274 (40.51%), Postives = 165/274 (60.22%), Query Frame = 1
Query:   37 VCEIDA-----EVGAGEAGALWNPDYTHEYQAWLRSQQGKNRPRAYIPGRQRDMKHNMRSILVDWIVEVCEEFKMATPTLFLIVELVDRALSKFEVARSRLQLLGCACILLASKHEEIYPPTVDDLVHISDNTYKRGDIIEMELRVMRELDFRLHCITPCFFLERFCRAAKSNRRERSLARYLLELLLQDYH-MLEYPPSLKAAAAVNLACQTLRSSAQTAWTAQARYYTGYAAQELEECVRRLHALHLGAEAHSLRAVRDKYTRSGNHRVSEV 840
            +CE D      ++ A     L+ PDY  +  ++L+  + +NRP+A    +Q D+  +MR ILVDW+VEV EE+K+   TL+L V  +DR LS   V RS+LQL+G A + LA+K EEIYPP V + V+I+D+TY +  ++ ME  V++ L F L   T   FL+RF RAA+++ +   +AR+L EL LQ+Y   + Y  S  AA+AV LA  TL  + Q  WTA   +YT +  Q++  CVR LH   + +  +  +AVR+KY     H+VS +
Sbjct:  162 ICETDRLGIEFDLDAKADSQLFVPDYAKDIFSYLKEAEQRNRPKANYMKKQPDITTSMRCILVDWLVEVAEEYKLHNETLYLAVNYIDRFLSSMSVLRSKLQLVGAASMFLAAKFEEIYPPEVGEFVYITDDTYTKKQVLRMEHLVLKVLSFDLAIPTINVFLDRFLRAAEADSKAECMARFLAELTLQEYEPYIRYSQSTIAASAVCLANHTLHPNQQP-WTATLEHYTSFTFQDILPCVRDLHHTFVNSVNNQQQAVREKYKTQKLHQVSLI 434          
BLAST of mRNA_S-ischiensis_contig106.1871.1 vs. uniprot
Match: A0A7S4G2F6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G2F6_9EUGL)

HSP 1 Score: 184 bits (467), Expect = 1.410e-52
Identity = 107/249 (42.97%), Postives = 154/249 (61.85%), Query Frame = 1
Query:   91 PDYTHEYQAWLRSQQGKNRPR-AYIPGRQRDMKHNMRSILVDWIVEVCEEFKMATPTLFLIVELVDRALSKFEVARSRLQLLGCACILLASKHEEIYPPTVDDLVHISDNTYKRGDIIEMELRVMRELDFRLHCITPCFFLERFCRAAKSNRRERSLARYLLELLLQDYHMLEYPPSLKAAAAVNLACQTLRSSAQTAWTAQARYYTGYAAQELEECVRRLHALHLGAEAHSLRAVRDKYTRSGNHRVS 834
            P+Y     ++LR  + ++RP   Y+   Q D+   MR+IL+DW+ EV EEF +   TL L V  VDR LS   V R+RLQL+G  C+L+ASK EEI PP+VDD V+I+DNTY R ++ +ME+ ++ +L+F L   T   F+  + R A++++    L  YL+EL LQDY  L YPPSL AA A+ LA  T  +     W+    YYT Y  QEL +C+R +H  +  +  ++L+AVR+KY+ S   RVS
Sbjct:   42 PEYFDTIASYLRIVERRHRPSMTYVEEVQADITWQMRAILIDWLNEVTEEFNLKIDTLCLAVNYVDRYLSCVHVQRNRLQLVGVTCMLIASKIEEIVPPSVDDFVYITDNTYTRDELTKMEIVILNQLEFCLTAATVRDFVGIYLRVAQADKAVCMLVDYLVELTLQDYVFLRYPPSLIAATAIVLALFTAEARC---WSDSLSYYTRYQPQELNDCLRDMHRCYAHSAENTLQAVREKYSHSRFLRVS 287          
BLAST of mRNA_S-ischiensis_contig106.1871.1 vs. uniprot
Match: A0A7S4II30_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4II30_9EUKA)

HSP 1 Score: 185 bits (469), Expect = 3.720e-52
Identity = 106/252 (42.06%), Postives = 160/252 (63.49%), Query Frame = 1
Query:   97 YTHEYQAWLRSQQGKNRPRAYIPGRQRDMKHNMRSILVDWIVEVCEEFKMATPTLFLIVELVDRALSKFEVARSRLQLLGCACILLASKHEEIYPPTVDDLVHISDNTYKRGDIIEMELRVMRELDFRLHCITPCFFLERFCRAAKSNRRERS---LARYLLELLLQDYHMLEYPPSLKAAAAVNLACQTLRSSAQTAWTAQARYYTGYAAQELEECVRRLHALHLGAEAHSLRAVRDKYTRSGNHRVSEVT 843
            Y  +  ++LR  + ++R   +    QRD+   MRSILVDW+VEV EE+++   TL+L V  +DR L+   V RS+LQL+G  C+L+ASK+EEI+PP VD+ V+ISDNTYKR +I+ ME  ++  L F L   T   FL RF +AAK    +++   L  YL EL LQ+Y  ++Y PS  AAAA+ LA  T+R  +   W+   +  +GY +++L+ CV  + +L   AE+++L+AVR+KY+ +    VS +T
Sbjct:  107 YVVDIFSYLRELELEHRVSPHFMQGQRDINATMRSILVDWLVEVAEEYRLVPETLYLAVNYIDRFLAHVPVNRSKLQLVGVTCMLIASKYEEIHPPAVDEFVYISDNTYKREEILHMEGMILNRLKFELSAATVKVFLNRFLKAAKVGECDQTTEKLCEYLCELTLQEYSFIKYRPSEIAAAALRLALHTMRLPS---WSPLLQDVSGYPSEKLQNCVAEMFSLFRKAESNNLQAVREKYSHAKFLCVSTLT 355          
BLAST of mRNA_S-ischiensis_contig106.1871.1 vs. uniprot
Match: A0A7I8K952_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K952_SPIIN)

HSP 1 Score: 184 bits (467), Expect = 1.180e-51
Identity = 112/281 (39.86%), Postives = 169/281 (60.14%), Query Frame = 1
Query:   37 VCEIDAEVGAGEAGALWNPDYTHEYQAWLRSQQ--GKNRPRA-YIPGRQRDMKHNMRSILVDWIVEVCEEFKMATPTLFLIVELVDRALSKFEVARSRLQLLGCACILLASKHEEIYPPTVDDLVHISDNTYKRGDIIEMELRVMRELDFRLHCITPCFFLERFCRAAKSNRRERSL-----ARYLLELLLQDYHMLEYPPSLKAAAAVNLACQTLRSSAQTAWTAQARYYTGYAAQELEECVRRLHALHLGAEAHSLRAVRDKYTRSGNHRVSEVTCLLA 855
            V +ID+ +G  +  A + PD       +LRS +   K RP A +I   Q+D+  NMR ILVDW+VEV EE+K+ + TL+L +  +DR LS   + R RLQLLG +C+L+ASK+EEI PP V+D  +I+DNTY + ++++ME  +++ L F +   T   FL RF RA + + +  SL     + YL EL L DY    + PS+ AA++V LA  T+       WT   ++Y+GY   EL++CV+ +H + L  +A SL A+RDKY +   H+   V  +L+
Sbjct:   95 VVDIDSSIGDPQLCAHYAPDIYR----YLRSMEVESKRRPLADFIEAVQKDVTANMRGILVDWLVEVAEEYKLISDTLYLTISYIDRFLSSNPINRQRLQLLGVSCMLIASKYEEISPPHVEDFCYITDNTYTKEEVVKMESEILKFLKFEMGNPTIKTFLRRFIRAGQDDCKSPSLQLEFMSNYLAELSLLDYSCTRFLPSVVAASSVFLARFTMNPDTHP-WTPTLQHYSGYKPSELDDCVQAIHDMQLNRKASSLVAIRDKYKQ---HKFKCVGTMLS 367          
BLAST of mRNA_S-ischiensis_contig106.1871.1 vs. uniprot
Match: A0A388L756_CHABU (Cyclin N-terminal domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L756_CHABU)

HSP 1 Score: 188 bits (477), Expect = 1.530e-51
Identity = 109/253 (43.08%), Postives = 157/253 (62.06%), Query Frame = 1
Query:   97 YTHEYQAWLRSQQGKNRPRA-YIPGRQRDMKHNMRSILVDWIVEVCEEFKMATPTLFLIVELVDRALSKFEVARSRLQLLGCACILLASKHEEIYPPTVDDLVHISDNTYKRGDIIEMELRVMRELDFRLHCITPCFFLERFCRAAKSNRRERSLARYLLELLLQDYHMLEYPPSLKAAAAVNLACQTLRSSAQTAWTAQARYYTGYAAQELEECVRRLHALHLGAEAHSLRAVRDKYTRSGNHRVSEVTCLL 852
            Y ++   +LR  + K   RA ++   Q+D+  NMR IL+DW+VEV EE+K+ + TL+L +  VDR L+   V RSRLQLLG AC+L+A+K+EEIY P V++  +I+DNTY+R +++EME  V++ L F L   T   FL RF R+A++N +   L  YL EL L DY  L Y PS+ AA+AV +A  TL  + Q  W     +YT Y A EL+ECV  +H   L     +L A+R+KY+   +H+   V  L+
Sbjct:  277 YVNDIYHFLRVAESKRWVRADFMETLQQDINPNMRGILIDWLVEVAEEYKLMSDTLYLTISYVDRYLTSNIVPRSRLQLLGVACMLIAAKYEEIYAPQVEEFCYITDNTYRREEVLEMERSVLKNLRFELTTPTIKSFLRRFLRSAQANTKMEFLGNYLAELTLLDYSFLRYLPSMVAASAVLMAKFTLEPN-QRPWDQTLAHYTHYHASELKECVMAIHHCQLNTRGCTLPAIREKYS---HHKFKCVATLM 525          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig106.1871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS66_ECTSI5.060e-11361.75Putative cyclin A n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5L2E4_9PHAE1.330e-10861.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJW4_9STRA4.630e-7048.86Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S0ETL5_9EUKA3.540e-5645.49Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A0M0JCK3_9EUKA4.100e-5443.25Cyclin N-terminal domain-containing protein n=1 Ta... [more]
UPI0003F0A1E23.190e-5340.51G2/mitotic-specific cyclin-A-like isoform X2 n=3 T... [more]
A0A7S4G2F6_9EUGL1.410e-5242.97Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S4II30_9EUKA3.720e-5242.06Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7I8K952_SPIIN1.180e-5139.86Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A388L756_CHABU1.530e-5143.08Cyclin N-terminal domain-containing protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig106contigS-ischiensis_contig106:117440..118432 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.4
Seed ortholog evalue7.4e-76
Seed eggNOG ortholog2880.D7FS66
Preferred nameCCNA2
KEGG koko:K06627,ko:K14521,ko:K14611,ko:K21777
KEGG TC2.A.40.6
KEGG Pathwayko03008,ko04110,ko04152,ko04218,ko04914,ko05161,ko05165,ko05169,ko05203,map03008,map04110,map04152,map04218,map04914,map05161,map05165,map05169,map05203
KEGG ModuleM00693
GOsGO:0000003,GO:0000070,GO:0000082,GO:0000083,GO:0000086,GO:0000278,GO:0000280,GO:0000307,GO:0000819,GO:0001932,GO:0001939,GO:0001940,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006325,GO:0006355,GO:0006464,GO:0006468,GO:0006508,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007088,GO:0007096,GO:0007127,GO:0007135,GO:0007140,GO:0007141,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0007399,GO:0007405,GO:0007422,GO:0008150,GO:0008152,GO:0008283,GO:0008284,GO:0008356,GO:0009058,GO:0009059,GO:0009555,GO:0009556,GO:0009653,GO:0009790,GO:0009791,GO:0009794,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010015,GO:0010101,GO:0010102,GO:0010311,GO:0010374,GO:0010389,GO:0010440,GO:0010444,GO:0010468,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010628,GO:0010639,GO:0010948,GO:0010965,GO:0015630,GO:0016043,GO:0016310,GO:0016538,GO:0016569,GO:0016570,GO:0016572,GO:0016579,GO:0017145,GO:0019207,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022622,GO:0023052,GO:0030071,GO:0030154,GO:0030234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031974,GO:0031981,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033301,GO:0034293,GO:0034641,GO:0034645,GO:0035186,GO:0035556,GO:0035561,GO:0036211,GO:0036445,GO:0042023,GO:0042127,GO:0042325,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043549,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044786,GO:0044839,GO:0044843,GO:0045120,GO:0045165,GO:0045170,GO:0045448,GO:0045786,GO:0045787,GO:0045839,GO:0045841,GO:0045859,GO:0045893,GO:0045930,GO:0045935,GO:0045995,GO:0046483,GO:0048103,GO:0048145,GO:0048146,GO:0048229,GO:0048232,GO:0048236,GO:0048285,GO:0048364,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048527,GO:0048528,GO:0048580,GO:0048582,GO:0048609,GO:0048646,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051098,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051252,GO:0051254,GO:0051276,GO:0051301,GO:0051321,GO:0051338,GO:0051445,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0055057,GO:0055059,GO:0060255,GO:0061351,GO:0061695,GO:0061982,GO:0061983,GO:0065007,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0072089,GO:0080090,GO:0090068,GO:0090304,GO:0090558,GO:0090627,GO:0090696,GO:0090697,GO:0090698,GO:0097123,GO:0097124,GO:0098722,GO:0098772,GO:0098813,GO:0099402,GO:0140013,GO:0140014,GO:1901360,GO:1901564,GO:1901576,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902494,GO:1902554,GO:1902680,GO:1902749,GO:1902806,GO:1902808,GO:1902911,GO:1903046,GO:1903047,GO:1903506,GO:1903508,GO:1905392,GO:1905393,GO:1905818,GO:1905819,GO:1990234,GO:2000026,GO:2000038,GO:2000112,GO:2000123,GO:2000241,GO:2000816,GO:2001141,GO:2001251
EggNOG free text desc.cell division
EggNOG OGsCOG5024@1,KOG0654@2759
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03009,ko03032,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPutative cyclin A
Ec32 orthologEc-01_000740.1
Exons1
Model size993
Cds size702
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig106.1871.1prot_S-ischiensis_contig106.1871.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig106 117620..118321 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815567.9779038-UTR-S-ischiensis_contig106:117439..1176191622815567.9779038-UTR-S-ischiensis_contig106:117439..117619Schizocladia ischiensis KU_0333UTRS-ischiensis_contig106 117440..117619 +
1695739775.2604406-UTR-S-ischiensis_contig106:117439..1176191695739775.2604406-UTR-S-ischiensis_contig106:117439..117619Schizocladia ischiensis KU_0333UTRS-ischiensis_contig106 117440..117619 +
1622815568.0142727-UTR-S-ischiensis_contig106:118321..1184321622815568.0142727-UTR-S-ischiensis_contig106:118321..118432Schizocladia ischiensis KU_0333UTRS-ischiensis_contig106 118322..118432 +
1695739775.2824066-UTR-S-ischiensis_contig106:118321..1184321695739775.2824066-UTR-S-ischiensis_contig106:118321..118432Schizocladia ischiensis KU_0333UTRS-ischiensis_contig106 118322..118432 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815567.9982042-CDS-S-ischiensis_contig106:117619..1183211622815567.9982042-CDS-S-ischiensis_contig106:117619..118321Schizocladia ischiensis KU_0333CDSS-ischiensis_contig106 117620..118321 +
1695739775.2727451-CDS-S-ischiensis_contig106:117619..1183211695739775.2727451-CDS-S-ischiensis_contig106:117619..118321Schizocladia ischiensis KU_0333CDSS-ischiensis_contig106 117620..118321 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig106.1871.1

>prot_S-ischiensis_contig106.1871.1 ID=prot_S-ischiensis_contig106.1871.1|Name=mRNA_S-ischiensis_contig106.1871.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=234bp
MKHNMRSILVDWIVEVCEEFKMATPTLFLIVELVDRALSKFEVARSRLQL
LGCACILLASKHEEIYPPTVDDLVHISDNTYKRGDIIEMELRVMRELDFR
LHCITPCFFLERFCRAAKSNRRERSLARYLLELLLQDYHMLEYPPSLKAA
AAVNLACQTLRSSAQTAWTAQARYYTGYAAQELEECVRRLHALHLGAEAH
SLRAVRDKYTRSGNHRVSEVTCLLADWLCFDGR*
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mRNA from alignment at S-ischiensis_contig106:117440..118432+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig106.1871.1 ID=mRNA_S-ischiensis_contig106.1871.1|Name=mRNA_S-ischiensis_contig106.1871.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=993bp|location=Sequence derived from alignment at S-ischiensis_contig106:117440..118432+ (Schizocladia ischiensis KU_0333)
GCGCCGGGCCAGGCGCGGCCGCAGCTGCCCCCGGGGGTGTGTGAGATTGA TGCGGAGGTTGGGGCCGGGGAAGCGGGGGCGCTCTGGAACCCGGACTACA CCCACGAGTACCAGGCGTGGCTGCGGTCGCAGCAGGGCAAGAACCGGCCG CGGGCGTACATCCCCGGGCGGCAGCGGGACATGAAGCACAACATGCGCAG CATCCTGGTGGACTGGATTGTGGAGGTGTGCGAGGAGTTCAAGATGGCGA CGCCTACCCTCTTCCTCATCGTGGAGCTGGTGGACCGCGCCCTGAGCAAG TTCGAGGTGGCGCGCAGCCGCCTGCAGCTGCTGGGGTGCGCCTGCATCCT CCTGGCGTCCAAGCACGAGGAGATCTACCCCCCCACGGTGGACGACCTCG TGCACATATCCGACAACACCTACAAGCGCGGGGACATCATCGAGATGGAG CTGCGGGTCATGCGGGAGCTCGACTTCCGCCTGCACTGCATCACCCCGTG CTTCTTCCTGGAACGCTTCTGCCGGGCGGCCAAGTCCAACCGGCGGGAGC GTTCCCTGGCGCGCTACCTCCTGGAGCTCCTGCTGCAGGACTACCACATG CTGGAGTACCCCCCGTCGCTCAAGGCCGCCGCCGCCGTCAACCTGGCCTG CCAGACCCTGCGCTCGTCCGCGCAGACCGCGTGGACGGCCCAGGCGCGCT ACTACACGGGCTACGCCGCCCAGGAGCTGGAGGAGTGCGTGCGGCGGCTG CACGCCCTGCACCTCGGCGCCGAGGCCCACTCCCTGCGTGCTGTGCGGGA CAAGTACACCCGCAGCGGGAACCACCGCGTGTCCGAGGTCACCTGCCTGC TAGCGGACTGGCTCTGTTTCGACGGCCGGTGAAGCCCGGGGGCTCGGCAT CGCCTGAGGCACCCGGGCCCGGGCCGGGCTGTGGGGTCGACGAGGTCAGA GCACAGGGAGAACGTGGGGAAAGCCGGGCGGTGGCGGGAGAGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig106:117440..118432+

>mRNA_S-ischiensis_contig106.1871.1 ID=mRNA_S-ischiensis_contig106.1871.1|Name=mRNA_S-ischiensis_contig106.1871.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1404bp|location=Sequence derived from alignment at S-ischiensis_contig106:117440..118432+ (Schizocladia ischiensis KU_0333)
ATGAAGCACAACATGCGCAGCATCCTGGTGGACTGGATTGTGGAGGTGTG
CGAGGAGTTCAAGATGGCGACGCCTACCCTCTTCCTCATCGTGGAGCTGG
TGGACCGCGCCCTGAGCAAGTTCGAGGTGGCGCGCAGCCGCCTGCAGCTG
CTGGGGTGCGCCTGCATCCTCCTGGCGTCCAAGCACGAGGAGATCTACCC
CCCCACGGTGGACGACCTCGTGCACATATCCGACAACACCTACAAGCGCG
GGGACATCATCGAGATGGAGCTGCGGGTCATGCGGGAGCTCGACTTCCGC
CTGCACTGCATCACCCCGTGCTTCTTCCTGGAACGCTTCTGCCGGGCGGC
CAAGTCCAACCGGCGGGAGCGTTCCCTGGCGCGCTACCTCCTGGAGCTCC
TGCTGCAGGACTACCACATGCTGGAGTACCCCCCGTCGCTCAAGGCCGCC
GCCGCCGTCAACCTGGCCTGCCAGACCCTGCGCTCGTCCGCGCAGACCGC
GTGGACGGCCCAGGCGCGCTACTACACGGGCTACGCCGCCCAGGAGCTGG
AGGAGTGCGTGCGGCGGCTGCACGCCCTGCACCTCGGCGCCGAGGCCCAC
TCCCTGCGTGCTGTGCGGGACAAGTACACCCGCAGCGGGAACCACCGCGT
GTCCGAGGTCACCTGCCTGCTAGCGGACTGGCTCTGTTTCGACGGCCGGT
GAATGAAGCACAACATGCGCAGCATCCTGGTGGACTGGATTGTGGAGGTG
TGCGAGGAGTTCAAGATGGCGACGCCTACCCTCTTCCTCATCGTGGAGCT
GGTGGACCGCGCCCTGAGCAAGTTCGAGGTGGCGCGCAGCCGCCTGCAGC
TGCTGGGGTGCGCCTGCATCCTCCTGGCGTCCAAGCACGAGGAGATCTAC
CCCCCCACGGTGGACGACCTCGTGCACATATCCGACAACACCTACAAGCG
CGGGGACATCATCGAGATGGAGCTGCGGGTCATGCGGGAGCTCGACTTCC
GCCTGCACTGCATCACCCCGTGCTTCTTCCTGGAACGCTTCTGCCGGGCG
GCCAAGTCCAACCGGCGGGAGCGTTCCCTGGCGCGCTACCTCCTGGAGCT
CCTGCTGCAGGACTACCACATGCTGGAGTACCCCCCGTCGCTCAAGGCCG
CCGCCGCCGTCAACCTGGCCTGCCAGACCCTGCGCTCGTCCGCGCAGACC
GCGTGGACGGCCCAGGCGCGCTACTACACGGGCTACGCCGCCCAGGAGCT
GGAGGAGTGCGTGCGGCGGCTGCACGCCCTGCACCTCGGCGCCGAGGCCC
ACTCCCTGCGTGCTGTGCGGGACAAGTACACCCGCAGCGGGAACCACCGC
GTGTCCGAGGTCACCTGCCTGCTAGCGGACTGGCTCTGTTTCGACGGCCG
GTGA
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